Citrus Sinensis ID: 043792

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290----
Protein Sequence
MAPPASSGIEEEIAVDRDGYDSSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVSSYGRYLCFNHVINCNEDAMKLARMLLPPSDTSTPPL
Secondary Structure (PSIPRED)
ccccccccHHHHHHHccccccccccccEEEEcccccHHHHHHHHHHHHcccEEEEEEcccccccccHHHHHccccccccEEEEccccccccHHHHHccccEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHcccccEEEEEccccEEEEcccccccccccccccccccHHHHcccccHHHHHHHHHHHHHHHHHHHccccEEEEEcccccccccccccccccccHHHHcccccccccHHHHHHHHHHHHHcccccccEEEEcccccHHHHHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHccHHccccccccccccccccEEEEcccHHHHHHHHHHHHHHcccEEEEEEEccccHHHHHHHHHccccHHHEEEEEHcHHccccHHHHHcccccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEcccEEEEEcccccccccEEEEccccccHHHHHHcccHHHHHHHHHHHHHHHHHHHccccEEEEcccEEEcccccccccccccccccccHcEEEEEEHHHHHHHHHHHHcccccccEEEEEcccccHHHHHHHHHHHHccccccccccc
Coil and Loop (DISEMBL)
mappassgieeeiavdrdgydssnatktVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEekklkvfqadpfdyHSLVNALKGcsglfysfeppsdhstyDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNnhrdnptshdfdernwsdvnlckkfklwHGLSKTLAEKTAWALAMDRGISmvsingglvmgpdvtisnpylkgAAEMYEDGVMASVDLRFYVDAHICvfedvssygrylcFNHVINCNEDAMKLARmllppsdtstppl
Flexible Loop (DISEMBL)
mappassgieeeiavdrdgydsSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRdnptshdfdernwSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSIngglvmgpdVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVSSYGRYLCFNHVINCNEDAMKLARMllppsdtstppl
Low Complexity Region (SEG)
MAPPASSGIEEEIAVDRDGYDSSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVSSYGRYLCFNHVINCNEDAMKLARMllppsdtstppl
Disordered region (IsUnstruct)
*************************TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSFEPP**HSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVSSYGRYLCFNHVINCNEDAMKLAR*************
Disordered Region (DISOPRED)
******************************VMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVSSYGRYLCFNHVINCNEDAMKLARMLLPPS*TSTPP*
Disordered Region (DISEMBL)
*********EEEIAVDRDGYDSSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVSSYGRYLCFNHVINCNEDAMKLARMLLP*********
Disordered Region (DISPRO)
*************************TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVSSYGRYLCFNHVINCNEDAMKLARMLLPPSDTSTP*L
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAPPASSGIEEEIAVDRDGYDSSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVSSYGRYLCFNHVINCNEDAMKLARMLLPPSDTSTPPL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	294	2.2.26 [Sep-21-2011]
Q500U8	326	Tetraketide alpha-pyrone	no	no	0.840	0.757	0.334	1e-32
Q9S9N9	344	Cinnamoyl-CoA reductase 1	no	no	0.867	0.741	0.351	4e-28
P51102	382	Dihydroflavonol-4-reducta	no	no	0.806	0.620	0.335	2e-27
Q9SAH9	332	Cinnamoyl-CoA reductase 2	no	no	0.850	0.753	0.339	2e-27
Q9XES5	348	Bifunctional dihydroflavo	N/A	no	0.887	0.75	0.329	3e-26
Q84KP0	347	Bifunctional dihydroflavo	N/A	no	0.884	0.749	0.321	1e-25
P51105	366	Dihydroflavonol-4-reducta	N/A	no	0.802	0.644	0.329	2e-25
P51110	337	Dihydroflavonol-4-reducta	no	no	0.850	0.741	0.334	1e-24
Q9CA28	321	Tetraketide alpha-pyrone	no	no	0.836	0.766	0.283	1e-24
P51106	354	Dihydroflavonol-4-reducta	N/A	no	0.823	0.683	0.311	3e-22

>sp|Q500U8|TKPR1_ARATH Tetraketide alpha-pyrone reductase 1 OS=Arabidopsis thaliana GN=TKPR1 PE=2 SV=1

 Score =  140 bits (352), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/263 (33%), Positives = 139/263 (52%), Gaps = 16/263 (6%)

Query: 24  NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQ 83
            A   VCV  ASG  AS LV+RLLL GY V   + + G  + +         +++L++ +
Sbjct: 3   QAKGKVCVTGASGFLASWLVKRLLLEGYEVIGTVRDPGNEKKLAHLWKLEGAKERLRLVK 62

Query: 84  ADPFDYHSLVNALKGCSGLFYSFEP---PSDHSTYDELTAEVETMAAHNVLEACAQTNTV 140
           AD  +  S  NA+ GC G+F++  P   P+ +   + L   +E     NVL +C +  ++
Sbjct: 63  ADLMEEGSFDNAIMGCQGVFHTASPVLKPTSNPEEEILRPAIE--GTLNVLRSCRKNPSL 120

Query: 141 DKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAM 200
            +VV TSS + V   +  D       DE  W+ V LCK+F++W+ LSKTLAE+ AW  + 
Sbjct: 121 KRVVLTSSSSTVRIRDDFDPKIP--LDESIWTSVELCKRFQVWYALSKTLAEQAAWKFSE 178

Query: 201 DRGISMVSINGGLVMGPDV------TISN--PYLKGAAEMYE-DGVMASVDLRFYVDAHI 251
           + GI +V++    ++GP +      T S+    LKG  E ++  G M  V +      HI
Sbjct: 179 ENGIDLVTVLPSFLVGPSLPPDLCSTASDVLGLLKGETEKFQWHGQMGYVHIDDVARTHI 238

Query: 252 CVFEDVSSYGRYLCFNHVINCNE 274
            VFE  ++ GRY+C ++VI+  E
Sbjct: 239 VVFEHEAAQGRYICSSNVISLEE 261

Involved in the biosynthesis of hydroxylated tetraketide compounds that serve as sporopollenin precursors (the main constituents of exine). Is essential for pollen wall development. Acts on tetraketide alpha-pyrones and reduces the carbonyl function on the tetraketide alkyl chain to a secondary alcohol function.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1

 Score =  125 bits (314), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 95/270 (35%), Positives = 141/270 (52%), Gaps = 15/270 (5%)

Query: 22  SSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKV 81
           +S A KTVCV  A G+ AS +V+ LL RGYTV   + N    +      +   +E+ L +
Sbjct: 6   ASPAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKER-LIL 64

Query: 82  FQADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD 141
            +AD  DY +L  A+ GC G+F++  P +D     E   E     A  V+ A A+   V 
Sbjct: 65  CKADLQDYEALKAAIDGCDGVFHTASPVTDDP---EQMVEPAVNGAKFVINAAAEAK-VK 120

Query: 142 KVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD 201
           +VV TSS+ AV  + +RD       DE  WSD++ CK  K W+   K +AE+ AW  A +
Sbjct: 121 RVVITSSIGAVYMDPNRDPEAV--VDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKE 178

Query: 202 RGISMVSINGGLVMGPDV--TISN------PYLKGAAEMYEDGVMASVDLRFYVDAHICV 253
           +G+ +V +N  LV+GP +  TI+        YL G+A+ Y +   A VD+R    AH+ V
Sbjct: 179 KGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLV 238

Query: 254 FEDVSSYGRYLCFNHVINCNEDAMKLARML 283
           +E  S+ GRYL      +  E    LA++ 
Sbjct: 239 YEAPSASGRYLLAESARHRGEVVEILAKLF 268

Involved in the latter stages of lignin biosynthesis. Catalyzes one of the last steps of monolignol biosynthesis, the conversion of cinnamoyl-CoAs into their corresponding cinnamaldehydes.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 4

EC: 4

>sp|P51102|DFRA_ARATH Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=3 SV=2

 Score =  123 bits (308), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 131/256 (51%), Gaps = 19/256 (7%)

Query: 27  KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADP 86
           +TVCV  ASG   S LV RLL RGY V A + + G L+ ++  L   N +  L +++AD 
Sbjct: 6   ETVCVTGASGFIGSWLVMRLLERGYFVRATVRDPGNLKKVQHLLDLPNAKTLLTLWKADL 65

Query: 87  FDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETM--AAHNVLEACAQTNTVDKVV 144
            +  S  +A+ GC G+F+    P D  + D     ++        +++AC +  TV + V
Sbjct: 66  SEEGSYDDAINGCDGVFH-VATPMDFESKDPENEVIKPTVNGMLGIMKACVKAKTVRRFV 124

Query: 145 FTSSLTAVVWNNHRDNPTSHDFDERNWSDVN--LCKKFKLW-HGLSKTLAEKTAWALAMD 201
           FTSS   V    H+ N     +DE +WSD+   + KK   W + +SKTLAEK AW  A +
Sbjct: 125 FTSSAGTVNVEEHQKNV----YDENDWSDLEFIMSKKMTGWMYFVSKTLAEKAAWDFAEE 180

Query: 202 RGISMVSINGGLVMGPDVTIS---------NPYLKGAAEMYEDGVMASVDLRFYVDAHIC 252
           +G+  +SI   LV+GP +T S         +P  +  A          V L    +AHI 
Sbjct: 181 KGLDFISIIPTLVVGPFITTSMPPSLITALSPITRNEAHYSIIRQGQYVHLDDLCNAHIF 240

Query: 253 VFEDVSSYGRYLCFNH 268
           ++E  ++ GRY+C +H
Sbjct: 241 LYEQAAAKGRYICSSH 256

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|Q9SAH9|CCR2_ARATH Cinnamoyl-CoA reductase 2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1

 Score =  122 bits (307), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/265 (33%), Positives = 134/265 (50%), Gaps = 15/265 (5%)

Query: 27  KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADP 86
           K VCV  A G+ AS +V+ LL RGYTV   + N    +      +   +E+ L +  AD 
Sbjct: 6   KLVCVTGAGGYIASWIVKLLLERGYTVRGTVRNPTDPKNNHLRELQGAKER-LTLHSADL 64

Query: 87  FDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFT 146
            DY +L   + GC G+F++  P +D     E   E     A  V++A A+   V +VVFT
Sbjct: 65  LDYEALCATIDGCDGVFHTASPMTDDP---ETMLEPAVNGAKFVIDAAAKAK-VKRVVFT 120

Query: 147 SSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISM 206
           SS+ AV  N +RD  T    DE  WSD++ CK  K W+   K LAE++AW  A  +G+ +
Sbjct: 121 SSIGAVYMNPNRD--TQAIVDENCWSDLDFCKNTKNWYCYGKMLAEQSAWETAKAKGVDL 178

Query: 207 VSINGGLVMGPDVTISN--------PYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVS 258
           V +N  LV+GP +  +          YL G+A+ Y +     VD+R     H+ V+E  S
Sbjct: 179 VVLNPVLVLGPPLQSAINASLVHILKYLTGSAKTYANLTQVYVDVRDVALGHVLVYEAPS 238

Query: 259 SYGRYLCFNHVINCNEDAMKLARML 283
           + GRY+     ++  E    LA+  
Sbjct: 239 ASGRYILAETALHRGEVVEILAKFF 263

Cinnamoyl-CoA reductase probably involved in the formation of phenolic compounds associated with the hypersensitive response. Seems not to be involved in lignin biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 4

EC: 4

>sp|Q9XES5|DFRA_MALDO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1

 Score =  119 bits (298), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/279 (32%), Positives = 141/279 (50%), Gaps = 18/279 (6%)

Query: 26  TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQAD 85
           +++VCV  ASG   S LV RLL  GYTV A + +    + ++  L     E  L +++AD
Sbjct: 5   SESVCVTGASGFIGSWLVMRLLEHGYTVRATVRDPTNQKKVKHLLDLPKAETHLTLWKAD 64

Query: 86  PFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETM-AAHNVLEACAQTNTVDKVV 144
             D  S   A++GCSG+F+   P    S   E      T+    ++L+AC +  TV K+V
Sbjct: 65  LADEGSFDEAIQGCSGVFHVATPMDFESKDPENEVIKPTINGLLDILKACQKAKTVRKLV 124

Query: 145 FTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL--W-HGLSKTLAEKTAWALAMD 201
           FTSS   V    H+  P    +DE NWSDV  C+  K+  W + +SKTLAE+ AW  A +
Sbjct: 125 FTSSAGTVNVEEHQ-KPV---YDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAKE 180

Query: 202 RGISMVSINGGLVMGPDVTISNP--YLKGAAEMYED----GVMAS---VDLRFYVDAHIC 252
             I  ++I   LV+GP +  S P   + G + +  +    G++     V L     +HI 
Sbjct: 181 NNIDFITIIPTLVIGPFLMPSMPPSLITGLSPILRNESHYGIIKQGQYVHLDDLCLSHIY 240

Query: 253 VFEDVSSYGRYLCFNHVINCNEDAMKLARMLLPPSDTST 291
           ++E   + GRY+C +H    +E  +K+ R   P  +  T
Sbjct: 241 LYEHPKAEGRYICSSHDATIHE-LVKMLREKYPEYNIPT 278

Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, dihydrokaempferol, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), naringenin to a low extent (10%), but not 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate.

Malus domestica (taxid: 3750)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 4

>sp|Q84KP0|DFRA_PYRCO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1

 Score =  117 bits (293), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 142/280 (50%), Gaps = 20/280 (7%)

Query: 26  TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQAD 85
           +++VCV  ASG   S LV RLL  GYTV A + +    + ++  L     E  L +++AD
Sbjct: 5   SESVCVTGASGFIGSWLVMRLLEHGYTVRATVRDPTNQKKVKHLLDLPKAETHLTLWKAD 64

Query: 86  PFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETM--AAHNVLEACAQTNTVDKV 143
             D  S   A++GCSG+F+    P D  + D     ++       ++L+AC +  TV K+
Sbjct: 65  LADEGSFDEAIQGCSGVFH-VATPMDFESRDPENEVIKPTINGLLDILKACQKAKTVRKL 123

Query: 144 VFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL--W-HGLSKTLAEKTAWALAM 200
           VFTSS   V    H+  P    +DE NWSDV  C+  K+  W + +SKTLAE+ AW  A 
Sbjct: 124 VFTSSAGTVNVEEHQ-KPV---YDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAK 179

Query: 201 DRGISMVSINGGLVMGPDVTISNP--YLKGAAEMYED----GVMAS---VDLRFYVDAHI 251
           +  I  ++I   LV+GP +  S P   + G + +  +    G++     V L     +HI
Sbjct: 180 ENNIDFITIIPTLVIGPFLMPSMPPSLITGLSPILRNESHYGIIKQGQYVHLDDLCLSHI 239

Query: 252 CVFEDVSSYGRYLCFNHVINCNEDAMKLARMLLPPSDTST 291
            +++   + GRY+C +H    +E  +K+ R   P  +  T
Sbjct: 240 YLYKHPKAEGRYICSSHDATIHE-LVKMLREKYPEYNIPT 278

Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), dihydrokaempferol to a low extent (5%), but not naringenin, 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate.

Pyrus communis (taxid: 23211)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 4

>sp|P51105|DFRA_GERHY Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=DFR PE=2 SV=1

 Score =  116 bits (290), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/255 (32%), Positives = 126/255 (49%), Gaps = 19/255 (7%)

Query: 28  TVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPF 87
           TVCV  A+G   S LV RLL RGY VHA + + G L+ ++  L     +  LK+++AD  
Sbjct: 8   TVCVTGAAGFIGSWLVMRLLERGYVVHATVRDPGDLKKVKHLLELPKAQTNLKLWKADLT 67

Query: 88  DYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETM--AAHNVLEACAQTNTVDKVVF 145
              S   A++GC G+F+    P D  + D     ++       +++ +C +  TV K+VF
Sbjct: 68  QEGSFDEAIQGCHGVFH-LATPMDFESKDPENEIIKPTIEGVLSIIRSCVKAKTVKKLVF 126

Query: 146 TSSLTAVVWNNHRDNPTSHDFDERNWSDVNLC--KKFKLW-HGLSKTLAEKTAWALAMDR 202
           TSS   V    +      H +DE +WSD++    KK   W + +SKTLAEK AW      
Sbjct: 127 TSSAGTV----NGQEKQLHVYDESHWSDLDFIYSKKMTAWMYFVSKTLAEKAAWDATKGN 182

Query: 203 GISMVSINGGLVMGPDVTISNP--------YLKGAAEMYEDGVMAS-VDLRFYVDAHICV 253
            IS +SI   LV+GP +T + P         + G    Y        V L    + HI +
Sbjct: 183 NISFISIIPTLVVGPFITSTFPPSLVTALSLITGNEAHYSIIKQGQYVHLDDLCECHIYL 242

Query: 254 FEDVSSYGRYLCFNH 268
           +E+  + GRY+C +H
Sbjct: 243 YENPKAKGRYICSSH 257

Gerbera hybrida (taxid: 18101)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51110|DFRA_VITVI Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1

 Score =  114 bits (284), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/275 (33%), Positives = 137/275 (49%), Gaps = 25/275 (9%)

Query: 24  NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQ 83
           + ++TVCV  ASG   S LV RLL R  TV A + +   ++ ++  L     E  L +++
Sbjct: 3   SQSETVCVTGASGFIGSWLVMRLLERRLTVRATVRDPTNVKKVKHLLDLPKAETHLTLWK 62

Query: 84  ADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDE---LTAEVETMAAHNVLEACAQTNTV 140
           AD  D  S   A+KGC+G+F+   P    S   E   +   +E M    ++++CA   TV
Sbjct: 63  ADLADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLG--IMKSCAAAKTV 120

Query: 141 DKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLC--KKFKLW-HGLSKTLAEKTAWA 197
            ++VFTSS   V    H+  P    +DE  WSD+  C  KK   W + +SKTLAE+ AW 
Sbjct: 121 RRLVFTSSAGTVNIQEHQ-LPV---YDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWK 176

Query: 198 LAMDRGISMVSINGGLVMGPDVTISNP--------YLKGAAEMYEDGVMAS-VDLRFYVD 248
            A +  I  ++I   LV+GP +  S P         + G    Y        V L    +
Sbjct: 177 YAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCN 236

Query: 249 AHICVFEDVSSYGRYLCFNHVINCNEDAMKLARML 283
           AHI +FE+  + GRY+C +H  +C    + LA+ML
Sbjct: 237 AHIYLFENPKAEGRYICSSH--DCI--ILDLAKML 267

Vitis vinifera (taxid: 29760)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|Q9CA28|TKPR2_ARATH Tetraketide alpha-pyrone reductase 2 OS=Arabidopsis thaliana GN=TKPR2 PE=2 SV=1

 Score =  113 bits (283), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 136/272 (50%), Gaps = 26/272 (9%)

Query: 31  VMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINY-----NEEKKLKVFQAD 85
           V   +G  AS +++ LL  G+TV   + N       +EE + +       +++LK+ QAD
Sbjct: 6   VTGGTGFIASYIIKSLLELGHTVRTTVRNPR-----DEEKVGFLWEFQGAKQRLKILQAD 60

Query: 86  PFDYHSLVNALKGCSGLFYSFEP---PSDHSTYDELTAEVETMAAHNVLEACAQTN-TVD 141
                S   A+ G  G+F++  P   P DH+  + L   +      NV+ +CA++  T+ 
Sbjct: 61  LTVEGSFDEAVNGVDGVFHTASPVLVPQDHNIQETLVDPI-IKGTTNVMSSCAKSKATLK 119

Query: 142 KVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD 201
           ++V TSS +++ +    D   +   +E +WSD   CK+F LW+G +KTL E+ AW +A +
Sbjct: 120 RIVLTSSCSSIRY--RFDATEASPLNESHWSDPEYCKRFNLWYGYAKTLGEREAWRIAEE 177

Query: 202 RGISMVSINGGLVMGP--------DVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICV 253
           +G+ +V +N   V+GP         + +     KG A  Y +  +  V +   V AH+  
Sbjct: 178 KGLDLVVVNPSFVVGPLLGPKPTSTLLMILAIAKGLAGEYPNFTVGFVHIDDVVAAHVLA 237

Query: 254 FEDVSSYGRYLCFNHVINCNEDAMKLARMLLP 285
            E+  + GR +C + V + +E  ++L R   P
Sbjct: 238 MEEPKASGRIICSSSVAHWSE-IIELMRNKYP 268

May be involved in the biosynthesis of hydroxylated tetraketide compounds that serve as sporopollenin precursors (the main constituents of exine). Acts on tetraketide alpha-pyrones and reduces the carbonyl function on the tetraketide alkyl chain to a secondary alcohol function.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|P51106|DFRA_HORVU Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=ANT18 PE=3 SV=1

 Score =  105 bits (263), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 85/273 (31%), Positives = 135/273 (49%), Gaps = 31/273 (11%)

Query: 29  VCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFD 88
           V V  ASG   S LV +LL  GYTV A + +   ++  +  L     +++L +++AD  +
Sbjct: 8   VVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKADLSE 67

Query: 89  YHSLVNALKGCSGLFYSFEPPSDHSTYDE----LTAEVETMAAHNVLEACAQTNTVDKVV 144
             S   A+ GC+G+F+    P D  + D     +   VE M   +++ AC +  TV ++V
Sbjct: 68  DGSFNEAIAGCTGVFH-VATPMDFDSQDPENEVIKPTVEGML--SIMRACKEAGTVKRIV 124

Query: 145 FTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL--W-HGLSKTLAEKTAWALAMD 201
           FTSS  +V   N  + P    +D+ NWSD++ C++ K+  W + +SK LAEK A   A +
Sbjct: 125 FTSSAGSV---NIEERPRPA-YDQDNWSDIDYCRRVKMTGWMYFVSKALAEKAAMEYASE 180

Query: 202 RGISMVSINGGLVMGPDVTISNP--------YLKGAAEMYEDGVMASVDLRF---YVDAH 250
            G+  +SI   LV+GP ++   P         + G    Y   ++  V L       DA 
Sbjct: 181 NGLDFISIIPTLVVGPFLSAGMPPSLVTALALITGNEAHYS--ILKQVQLVHLDDLCDAM 238

Query: 251 ICVFEDVSSYGRYLCFNHVINCNEDAMKLARML 283
             +FE   + GRY+C +H    +     LARML
Sbjct: 239 TFLFEHPEANGRYICSSH----DATIHGLARML 267

Hordeum vulgare (taxid: 4513)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	294
255558075	312	cinnamoyl-CoA reductase, putative [Ricin	0.904	0.852	0.722	1e-114
224124132	306	predicted protein [Populus trichocarpa]	0.901	0.866	0.709	1e-108
229368454	299	cinnamoyl-CoA reductase 1 [Gossypium hir	0.867	0.852	0.724	1e-108
449460698	298	PREDICTED: cinnamoyl-CoA reductase 1-lik	0.884	0.872	0.692	1e-106
225454724	306	PREDICTED: dihydroflavonol-4-reductase i	0.877	0.843	0.715	1e-105
388502886	300	unknown [Lotus japonicus]	0.894	0.876	0.655	1e-101
356531429	299	PREDICTED: bifunctional dihydroflavonol	0.894	0.879	0.656	1e-101
356496370	299	PREDICTED: bifunctional dihydroflavonol	0.884	0.869	0.652	1e-101
225427173	308	PREDICTED: dihydroflavonol-4-reductase [	0.874	0.834	0.655	1e-99
224138952	305	predicted protein [Populus trichocarpa]	0.867	0.836	0.659	3e-98

>gi|255558075|ref|XP_002520066.1| cinnamoyl-CoA reductase, putative [Ricinus communis] gi|223540830|gb|EEF42390.1| cinnamoyl-CoA reductase, putative [Ricinus communis]

 Score =  416 bits (1068), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 195/270 (72%), Positives = 227/270 (84%), Gaps = 4/270 (1%)

Query: 23  SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVF 82
           S +++TVCVMDASG   + LV +LL RGYTVHAA+HNHGKL+  EE      + KKL+VF
Sbjct: 9   SESSQTVCVMDASGRLGTTLVHKLLKRGYTVHAAVHNHGKLKYFEELSC---KSKKLRVF 65

Query: 83  QADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDK 142
            +DPFD+HS++ ALKGC GLFYSFEPPSD  TYDE  A+VE  AAHNVLEACA+T T+ K
Sbjct: 66  YSDPFDFHSIIEALKGCCGLFYSFEPPSDQPTYDEFMADVEVRAAHNVLEACAKTVTIHK 125

Query: 143 VVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR 202
           VVFTSS+TAV+W+N R N TS D DER WSDVN C+KFKLWHGLSK LAEKTAWALAMDR
Sbjct: 126 VVFTSSVTAVIWSNDR-NSTSSDLDERYWSDVNFCRKFKLWHGLSKALAEKTAWALAMDR 184

Query: 203 GISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVSSYGR 262
           GI+MVSINGGL+M PD++I+NPYLKGAAEMYEDG+  +VDL   VDAHICVFEDV+SYGR
Sbjct: 185 GINMVSINGGLLMSPDLSIANPYLKGAAEMYEDGLFVTVDLSVAVDAHICVFEDVASYGR 244

Query: 263 YLCFNHVINCNEDAMKLARMLLPPSDTSTP 292
           YLCFNHVINCNEDA+KLAR LLPPS+++ P
Sbjct: 245 YLCFNHVINCNEDAIKLARELLPPSESTVP 274

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224124132|ref|XP_002319253.1| predicted protein [Populus trichocarpa] gi|222857629|gb|EEE95176.1| predicted protein [Populus trichocarpa]

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 193/272 (70%), Positives = 221/272 (81%), Gaps = 7/272 (2%)

Query: 23  SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVF 82
           +  +KTVCVMDASG   S++V RLL RGY+VHAA+ N GKL    E L   NE  KLKVF
Sbjct: 8   NQTSKTVCVMDASGPLGSSIVHRLLQRGYSVHAAVQNQGKLWQSFEGLSCNNE--KLKVF 65

Query: 83  QADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDK 142
            +DPFDYHS+++ALKGC GLFYSFEPPSD  TYDE  A+VE  AAHNVLEACAQTNT+DK
Sbjct: 66  HSDPFDYHSIMDALKGCCGLFYSFEPPSDQPTYDEFMADVEVRAAHNVLEACAQTNTIDK 125

Query: 143 VVFTSSLTAVVWNN-HRDNPTSHDFDERNWSDVNLCKKFK-LWHGLSKTLAEKTAWALAM 200
           VVFTSS T V+WN+ HR  P   D DERNWSD+N C+KFK LW  LSKTLAEKTAWALAM
Sbjct: 126 VVFTSSATTVIWNDSHRKAP---DLDERNWSDLNFCRKFKQLWQALSKTLAEKTAWALAM 182

Query: 201 DRGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVSSY 260
           DR I+MV++NGGL+M PD+TI+NPYLKGAAEMYEDGV  +VDLRF VD HI VFED++SY
Sbjct: 183 DRSINMVTVNGGLLMSPDLTIANPYLKGAAEMYEDGVFVTVDLRFIVDTHIHVFEDITSY 242

Query: 261 GRYLCFNHVINCNEDAMKLARMLLPPSDTSTP 292
           GRYLCFNHVI CNEDA+KLA  LLPPS++S P
Sbjct: 243 GRYLCFNHVIKCNEDAVKLANTLLPPSESSLP 274

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|229368454|gb|ACQ59093.1| cinnamoyl-CoA reductase 1 [Gossypium hirsutum]

 Score =  395 bits (1016), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 189/261 (72%), Positives = 217/261 (83%), Gaps = 6/261 (2%)

Query: 25  ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNH-GKLQCIEEELINYNEEKKLKVFQ 83
           +++TVCVMDASGH  SALV  LL RGYTVHAAL  H    Q +EE L + N  K LK+F 
Sbjct: 3   SSRTVCVMDASGHLGSALVHLLLHRGYTVHAALQPHPNGFQSVEELLPSSN--KNLKIFD 60

Query: 84  ADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKV 143
           ADPFDYHS++ ALKGC GLFY F+PPSDHSTYDE  AE+E  AAHNVLEACAQT+T++KV
Sbjct: 61  ADPFDYHSIIAALKGCCGLFYCFQPPSDHSTYDEFMAEIEARAAHNVLEACAQTDTIEKV 120

Query: 144 VFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRG 203
           VF SS+TAV+WN  R   T  D DE+NW+D+N CKKFKLWH LSKTLAEK+AWALAMDRG
Sbjct: 121 VFRSSVTAVIWNESR---TGSDLDEKNWTDINFCKKFKLWHALSKTLAEKSAWALAMDRG 177

Query: 204 ISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVSSYGRY 263
           I+MV+INGGL+M PD+TI+NPYLKGAAEMYEDGV  +VDLRF  DAHICVFEDVSSYGRY
Sbjct: 178 INMVTINGGLLMTPDLTITNPYLKGAAEMYEDGVFVTVDLRFIADAHICVFEDVSSYGRY 237

Query: 264 LCFNHVINCNEDAMKLARMLL 284
           LCFNHVI+C+ DA KLA+MLL
Sbjct: 238 LCFNHVISCSHDADKLAQMLL 258

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449460698|ref|XP_004148082.1| PREDICTED: cinnamoyl-CoA reductase 1-like [Cucumis sativus] gi|449518419|ref|XP_004166239.1| PREDICTED: cinnamoyl-CoA reductase 1-like [Cucumis sativus]

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 187/270 (69%), Positives = 221/270 (81%), Gaps = 10/270 (3%)

Query: 27  KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADP 86
           KTVCVMDAS    SALV  LL RGYTVHA+L NH  LQC++          KLKVF++D 
Sbjct: 6   KTVCVMDASSRVGSALVAALLHRGYTVHASLQNHDDLQCVK------GNANKLKVFRSDL 59

Query: 87  FDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFT 146
            DYHS++ ALKGCS LFYSF+PP DHSTYDEL  E+E  AAHNVLEACAQT T++KV+FT
Sbjct: 60  LDYHSIMIALKGCSALFYSFQPPPDHSTYDELMVEIEVRAAHNVLEACAQTETMEKVIFT 119

Query: 147 SSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISM 206
           SS+TAV+W +     +S D DER+WSDVNLCKKFKLWH LSKT+AEKTAWALAMDRG++M
Sbjct: 120 SSITAVIWRDGLKTMSS-DVDERHWSDVNLCKKFKLWHALSKTVAEKTAWALAMDRGVNM 178

Query: 207 VSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVSSYGRYLCF 266
           VSINGGLVMG DVT++NPYLKGAAEMYEDGV+ +VDL+F VDAHICVFEDVSSYGRYLCF
Sbjct: 179 VSINGGLVMGHDVTMNNPYLKGAAEMYEDGVLVTVDLKFIVDAHICVFEDVSSYGRYLCF 238

Query: 267 NHVINCNEDAMKLARMLLPPSDTS---TPP 293
           N++IN +++A++LA MLLPPS  +   +PP
Sbjct: 239 NNIINSHKEALRLAHMLLPPSSEAFSHSPP 268

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225454724|ref|XP_002272488.1| PREDICTED: dihydroflavonol-4-reductase isoform 2 [Vitis vinifera] gi|225454726|ref|XP_002272449.1| PREDICTED: dihydroflavonol-4-reductase isoform 1 [Vitis vinifera] gi|297737286|emb|CBI26487.3| unnamed protein product [Vitis vinifera]

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 189/264 (71%), Positives = 216/264 (81%), Gaps = 6/264 (2%)

Query: 21  DSSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLK 80
           D   + KTVCVMDASG   SALVRRLL RGYTVHAALH  G+ + +E    N   +KKL+
Sbjct: 8   DEVISEKTVCVMDASGRVGSALVRRLLRRGYTVHAALH--GEYEIVEGVCCN---KKKLR 62

Query: 81  VFQADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTV 140
           VF ADP DYHS+++ALKGCS LFYSFEPPSDH  YDE  A+VE  AAHNVLEACAQT+T+
Sbjct: 63  VFPADPLDYHSIMDALKGCSALFYSFEPPSDHPNYDEYMADVEVRAAHNVLEACAQTDTI 122

Query: 141 DKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAM 200
           +KVVFTSS+TAV+W + R N T  D DERNWSDVN C+KFKLWHG+SKTLAE+TAWALAM
Sbjct: 123 EKVVFTSSITAVIWRDDR-NSTPSDLDERNWSDVNFCRKFKLWHGVSKTLAERTAWALAM 181

Query: 201 DRGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVSSY 260
           DRG++MVSINGGL+M   +TISNPYLKGAAEM+EDGV  +VDL F VDAHI VFED SSY
Sbjct: 182 DRGVNMVSINGGLLMADHLTISNPYLKGAAEMFEDGVFVTVDLNFLVDAHISVFEDSSSY 241

Query: 261 GRYLCFNHVINCNEDAMKLARMLL 284
           GRYLCFNHVIN N+DA+ LA MLL
Sbjct: 242 GRYLCFNHVINSNQDAIHLANMLL 265

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388502886|gb|AFK39509.1| unknown [Lotus japonicus]

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 177/270 (65%), Positives = 212/270 (78%), Gaps = 7/270 (2%)

Query: 25  ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELIN--YNEEKKLKVF 82
           +T TVCVMDASG     LV++LL RGYTVHA++  +G    +++E+ N    +  KLKVF
Sbjct: 8   STHTVCVMDASGQLGFRLVQKLLQRGYTVHASIQKYG----VDKEMFNEISADSDKLKVF 63

Query: 83  QADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDK 142
           ++DPFDYHSL++ALKGCSGLFY+FEPP D   YDE  A+VE  AAHNVLEACAQT T+DK
Sbjct: 64  RSDPFDYHSLIDALKGCSGLFYTFEPPFDQPDYDEFMADVEVRAAHNVLEACAQTETMDK 123

Query: 143 VVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR 202
           VVFTS+ TA VW   R      D DER+WSDVN C+KFKLWHG+SKTLAEKTAWALAMDR
Sbjct: 124 VVFTSAATATVWREDR-KTMELDLDERHWSDVNFCRKFKLWHGMSKTLAEKTAWALAMDR 182

Query: 203 GISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVSSYGR 262
           G++MVSIN GL M  D++I NPYL+GAAEMYEDGV  +VDL F VDAHICV+EDVSSYGR
Sbjct: 183 GVNMVSINSGLGMSHDLSIKNPYLRGAAEMYEDGVFVTVDLEFLVDAHICVYEDVSSYGR 242

Query: 263 YLCFNHVINCNEDAMKLARMLLPPSDTSTP 292
           YLCFNH+IN  +DA++LAR L P + +S P
Sbjct: 243 YLCFNHIINTQDDAVQLARKLTPAASSSMP 272

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531429|ref|XP_003534280.1| PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase-like [Glycine max]

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 178/271 (65%), Positives = 215/271 (79%), Gaps = 8/271 (2%)

Query: 24  NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELIN--YNEEKKLKV 81
            +T TVCVMDASGH   +LV+RLL RGYTVHA++  +G     EE L     ++  KLKV
Sbjct: 7   TSTHTVCVMDASGHLGFSLVQRLLQRGYTVHASVQKYG-----EENLFTGISSDPDKLKV 61

Query: 82  FQADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD 141
           F++DPFDYHS+++AL+GCSGLFY+FEPP D   YDE  A+VE  AAHNVLEACAQT T+D
Sbjct: 62  FRSDPFDYHSIIDALRGCSGLFYTFEPPFDQPNYDEYMADVEVRAAHNVLEACAQTETMD 121

Query: 142 KVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD 201
           KVVFTSS TAVVW   R      D DER+WSDVN C+KFKLWHG+SKT+AEK+AWALAMD
Sbjct: 122 KVVFTSSATAVVWREDR-KTMELDLDERHWSDVNFCRKFKLWHGVSKTMAEKSAWALAMD 180

Query: 202 RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVSSYG 261
           RG++MVSIN GL+M  D++I +PYL+GAAEMYEDGV  +VDL F VDAHICV+EDVSSYG
Sbjct: 181 RGVNMVSINAGLMMAHDLSIKHPYLRGAAEMYEDGVFVTVDLAFLVDAHICVYEDVSSYG 240

Query: 262 RYLCFNHVINCNEDAMKLARMLLPPSDTSTP 292
           RYLCFNH+IN +EDA++LAR L P + +S P
Sbjct: 241 RYLCFNHIINTHEDAVQLARKLTPGASSSLP 271

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496370|ref|XP_003517041.1| PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase-like [Glycine max]

 Score =  372 bits (956), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 175/268 (65%), Positives = 216/268 (80%), Gaps = 8/268 (2%)

Query: 25  ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELIN--YNEEKKLKVF 82
           +T TVCVMDASGH   +LV+RLL RGYTVHA++ ++G     EE L N   ++  KL+VF
Sbjct: 8   STHTVCVMDASGHLGFSLVQRLLQRGYTVHASVQSYG-----EENLFNGISSDPDKLRVF 62

Query: 83  QADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDK 142
           ++DPFDYHS+++AL+GCSGLFYSFEPP D   YDE  A+VE  AAHNVLEACAQT T+DK
Sbjct: 63  RSDPFDYHSIIDALRGCSGLFYSFEPPFDQPNYDEYMADVEVRAAHNVLEACAQTETIDK 122

Query: 143 VVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR 202
           V+FTSS TAVVW   R      D DER+WSDVN C+KFKLWHG+SKT+AEK+AWALAMDR
Sbjct: 123 VIFTSSATAVVWREDR-KTMELDLDERHWSDVNFCRKFKLWHGVSKTMAEKSAWALAMDR 181

Query: 203 GISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVSSYGR 262
           G++MVSIN GL+M  D+++ +PYL+GAAEMYEDGV  +VDL F VDAHICV+EDVSSYGR
Sbjct: 182 GVNMVSINAGLLMAHDLSVKHPYLRGAAEMYEDGVFVTVDLGFLVDAHICVYEDVSSYGR 241

Query: 263 YLCFNHVINCNEDAMKLARMLLPPSDTS 290
           YLCFNH+IN ++DA++LAR L P + +S
Sbjct: 242 YLCFNHIINTHDDAVQLARKLTPGASSS 269

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225427173|ref|XP_002278778.1| PREDICTED: dihydroflavonol-4-reductase [Vitis vinifera]

 Score =  369 bits (947), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 175/267 (65%), Positives = 216/267 (80%), Gaps = 10/267 (3%)

Query: 29  VCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELIN--YNEEKKLKVFQADP 86
           VCVMDAS    S LV  LLLRGYTVHAA+ NHG++Q     L+N    + +KLK+F +DP
Sbjct: 15  VCVMDASSTLGSTLVGSLLLRGYTVHAAVQNHGEIQ-----LLNGLSCDTQKLKIFHSDP 69

Query: 87  FDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFT 146
           FDY S+++ALKGCSGLFY+FEPP D ++YDEL A+VE  AAHNV+EACAQT T++KVVFT
Sbjct: 70  FDYQSIMDALKGCSGLFYTFEPPHDQTSYDELMADVEVRAAHNVIEACAQTETIEKVVFT 129

Query: 147 SSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISM 206
           SS+TAVVW + R +  S D DE +W+D+N  +KFKLWH +SKTLAEK+AWALAMDRG++M
Sbjct: 130 SSVTAVVWRDDRKSIPS-DLDETHWTDINFSRKFKLWHAMSKTLAEKSAWALAMDRGVNM 188

Query: 207 VSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVSSYGRYLCF 266
           VS+N GL+M PD+TI++PYLKGAAEMYEDGV  +V + F VDAHICVFEDVSSYGRYLCF
Sbjct: 189 VSVNAGLLMAPDLTITHPYLKGAAEMYEDGVFVTVSVDFLVDAHICVFEDVSSYGRYLCF 248

Query: 267 NHVINCNEDAMKLARMLLPPSDTSTPP 293
           NH+IN NEDA+KLA+ L P +   +PP
Sbjct: 249 NHIINNNEDALKLAKTLAPSA--PSPP 273

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224138952|ref|XP_002326731.1| predicted protein [Populus trichocarpa] gi|222834053|gb|EEE72530.1| predicted protein [Populus trichocarpa]

 Score =  364 bits (934), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 172/261 (65%), Positives = 208/261 (79%), Gaps = 6/261 (2%)

Query: 26  TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYN-EEKKLKVFQA 84
           + TVCVMDASG+   +LV+RLL RGY VHAA+ NH      E +L   + E KKLK+F A
Sbjct: 10  SNTVCVMDASGNLGLSLVQRLLQRGYMVHAAVQNHN----CELQLNGLSCENKKLKIFYA 65

Query: 85  DPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVV 144
           DPFDY S+++AL+ CSGLFY+FEPP D  TYDE   EVE  AAHNVLEACA T T+DKVV
Sbjct: 66  DPFDYKSILDALRSCSGLFYTFEPPEDQPTYDESMTEVEVRAAHNVLEACAHTETMDKVV 125

Query: 145 FTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGI 204
           FTSS TAV+W + R +  + DFDER+WSD+N C+KFKLWH LSKTLAEKT WALAMDRG+
Sbjct: 126 FTSSATAVIWRDDRKSEIA-DFDERHWSDINFCRKFKLWHALSKTLAEKTTWALAMDRGV 184

Query: 205 SMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVSSYGRYL 264
           +MVS+N GL++ PD++I NPYL GAAE+YEDGV  +VDL F VDAHIC++EDVSSYGRYL
Sbjct: 185 NMVSVNAGLLVSPDLSIKNPYLTGAAELYEDGVFVTVDLNFLVDAHICIYEDVSSYGRYL 244

Query: 265 CFNHVINCNEDAMKLARMLLP 285
           CFNHV+N +EDA++LA ML P
Sbjct: 245 CFNHVVNRHEDAIELASMLTP 265

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	294
TAIR|locus:2061411	304	AT2G23910 [Arabidopsis thalian	0.853	0.825	0.468	3.4e-61
TAIR|locus:2118766	303	AT4G30470 [Arabidopsis thalian	0.853	0.828	0.479	9e-61
TAIR|locus:2222697	368	AT5G14700 [Arabidopsis thalian	0.884	0.706	0.341	1.1e-39
TAIR|locus:2012315	322	AT1G09510 [Arabidopsis thalian	0.860	0.785	0.365	1.2e-33
TAIR|locus:2033904	325	AT1G51410 [Arabidopsis thalian	0.846	0.766	0.359	1.5e-33
TAIR|locus:2200427	344	CCR1 "cinnamoyl coa reductase	0.802	0.686	0.370	2.6e-31
TAIR|locus:2122093	326	DRL1 "dihydroflavonol 4-reduct	0.823	0.742	0.341	3.3e-31
TAIR|locus:2150315	326	AT5G19440 [Arabidopsis thalian	0.857	0.773	0.337	1.1e-30
TAIR|locus:2025832	332	CCR2 "cinnamoyl coa reductase"	0.840	0.743	0.352	1.4e-30
TAIR|locus:2171258	324	AT5G58490 [Arabidopsis thalian	0.857	0.777	0.344	2.3e-30

TAIR|locus:2061411 AT2G23910 [Arabidopsis thaliana (taxid:3702)]

 Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
 Identities = 126/269 (46%), Positives = 181/269 (67%)

Query:    24 NATKTV---CVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEEL--INYNEEKK 78
             N  KT+   CV+DAS +    +++RLL RGY+VHAA+  +G+   +EE++  +  NEE+ 
Sbjct:     2 NQEKTISCCCVLDASTYVGFWILKRLLTRGYSVHAAIRKNGE-SVLEEKIRDMEANEER- 59

Query:    79 LKVFQADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTN 138
             L+V+  D  DY S++ +L  C+ +F   + P  +   +E   ++E   A NV+EACA+T 
Sbjct:    60 LEVYDVDVLDYQSILISLNNCNAVFCCLDNPEGYD--EEKEVDLEVRGAINVVEACARTE 117

Query:   139 TVDKVVFTSSLTAVVWNNHRDN-PTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWA 197
             +++K+VF+SSLTA +W   RDN  T  D DE+ WSD++ C K KLWH L+KT +EK AWA
Sbjct:   118 SIEKIVFSSSLTAAIW---RDNIGTQKDVDEKCWSDLDFCLKKKLWHALAKTQSEKAAWA 174

Query:   198 LAMDRGISMVSINGGLVMGPDVTISNP-----YLKGAAEMYEDGVMASVDLRFYVDAHIC 252
             LAMDR ++MVS+N GL++GP V   NP     YLKGAA+MYE+GV+A VD+ F  D HI 
Sbjct:   175 LAMDRMVNMVSVNPGLIVGPSVAQHNPRPTMSYLKGAAQMYENGVLAYVDVEFVADVHIR 234

Query:   253 VFEDVSSYGRYLCFNHVINCNEDAMKLAR 281
              FED S+ GRY CFN ++N  E+A+KL +
Sbjct:   235 AFEDTSACGRYFCFNQIVNTEEEALKLVQ 263

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0080167 "response to karrikin" evidence=IEP

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009813 "flavonoid biosynthetic process" evidence=RCA

GO:0010224 "response to UV-B" evidence=RCA

TAIR|locus:2118766 AT4G30470 [Arabidopsis thaliana (taxid:3702)]

 Score = 622 (224.0 bits), Expect = 9.0e-61, P = 9.0e-61
 Identities = 128/267 (47%), Positives = 178/267 (66%)

Query:    21 DSSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNE--EKK 78
             D   +T   CV+DAS +    ++++LL RGY+VHAA+  +G+ +   EE+I   E  E++
Sbjct:     2 DHDKSTSCCCVLDASTYVGFWILKKLLSRGYSVHAAIRRNGESEI--EEMIREMETTEER 59

Query:    79 LKVFQADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTN 138
             L V+  D  DY S++ +LK C+ +F   + P     YDE   ++E   A NV+EAC +T 
Sbjct:    60 LVVYDVDVLDYQSILVSLKTCNVVFCCLDSPEG---YDEKEVDLEVRGAINVVEACGRTE 116

Query:   139 TVDKVVFTSSLTAVVWNNHRDN-PTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWA 197
             +++K+VF+SSLTA +W   RDN  T  D DE+ WSD + C+  KLWH L+K L+EK AWA
Sbjct:   117 SIEKIVFSSSLTASIW---RDNIGTQKDVDEKCWSDQDFCRSKKLWHALAKMLSEKAAWA 173

Query:   198 LAMDRGISMVSINGGLVMGPDVTISN--P---YLKGAAEMYEDGVMASVDLRFYVDAHIC 252
             LAMDR ++MVSIN GLV+GP V   N  P   YLKGAA+MYE+GV+A VD++F  D HI 
Sbjct:   174 LAMDRRLNMVSINPGLVVGPSVAQHNARPTMSYLKGAAQMYENGVLAYVDVKFLADVHIR 233

Query:   253 VFEDVSSYGRYLCFNHVINCNEDAMKL 279
              FEDVS+ GRY CFN ++N  E+A+KL
Sbjct:   234 AFEDVSACGRYFCFNQIVNTEEEALKL 260

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

TAIR|locus:2222697 AT5G14700 [Arabidopsis thaliana (taxid:3702)]

 Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
 Identities = 94/275 (34%), Positives = 153/275 (55%)

Query:    21 DSSNATKTVCVMDASGHFASALVRRLLLRGYTVHAAL---HNHGKLQCIEEELINYNEEK 77
             DS    + VCV     +   A+V+RLL+ GY+V   +    +  K+  +E +    +   
Sbjct:    47 DSDAGNRLVCVTGGVSYLGRAIVKRLLVHGYSVRIVVDCPEDKEKVSEMEADAETASFSN 106

Query:    78 KLKVFQADPFDYHSLVNALKGCSGLFYS--FEPPSDHSTYDELTAEVETMAAHNVLEACA 135
              +    +   +  SL+ A  GC+G+F++  F  P+  S Y +  AE+E   + +V+EAC 
Sbjct:   107 MITSVVSRLTEIDSLIKAFDGCAGVFHTSAFVDPAGVSGYSKSMAELEAKVSESVIEACT 166

Query:   136 QTNTVDKVVFTSSLTAVVWNNHRDNPTSHD-FDERNWSDVNLCKKFKLWHGLSKTLAEKT 194
             +T +V K VFTSSL A  W  +  N   H   +E +WSD  LC   KLW+ L K  AEK 
Sbjct:   167 RTASVRKCVFTSSLLACAWQKNPCNSLDHSVINEESWSDEQLCIDNKLWYALGKLKAEKA 226

Query:   195 AWALAMDRGISMVSINGGLVMGPDV-----TISNPYLKGAAEMYEDGVMASVDLRFYVDA 249
             AW +A  +G+ + +I   L+ GPD      T +  YLKGA EMY +G++A++D+     A
Sbjct:   227 AWRIADSKGLKLATICPALITGPDFFNRNSTSTLAYLKGAKEMYSNGLLATMDVNRLAKA 286

Query:   250 HICVFEDV---SSYGRYLCFNHVINCNEDAMKLAR 281
             H+C++E +   +++GRY+CF+ +++  + A KLA+
Sbjct:   287 HVCLWEGLGNKTAFGRYICFDTILS-RDGAEKLAK 320

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

TAIR|locus:2012315 AT1G09510 [Arabidopsis thaliana (taxid:3702)]

 Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
 Identities = 96/263 (36%), Positives = 143/263 (54%)

Query:    27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADP 86
             K VCV  ASG+ AS +V+ LLLRGYTV A + +    +  E  L     ++KLK+F+AD 
Sbjct:     6 KMVCVTGASGYVASWIVKLLLLRGYTVRATVRDPSDEKKTEHLLALDGAKEKLKLFKADL 65

Query:    87 FDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTA-EVETMAAHNVLEACAQTNTVDKVVF 145
              +  S   A++GC  +F++  P S   T  ++   +       NVL+ CA+ ++V +V+ 
Sbjct:    66 LEEGSFEQAIEGCDAVFHTASPVSLTVTDPQIELIDPAVKGTLNVLKTCAKVSSVKRVIV 125

Query:   146 TSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGIS 205
             TSS+ AV++      P     DE  +SD N C + KLW+ LSKTLAE  AW  A ++G+ 
Sbjct:   126 TSSMAAVLFREPTLGPNDL-VDESCFSDPNFCTEKKLWYALSKTLAEDEAWRFAKEKGLD 184

Query:   206 MVSINGGLVMGP----DVTIS-NPYLK--GAAEMYEDGVMASVDLRFYVDAHICVFEDVS 258
             +V IN GLV+GP     +T S N  ++     + + +     VD+R    AHI  FE  S
Sbjct:   185 LVVINPGLVLGPLLKPSLTFSVNVIVELITGKDNFINKDFRLVDVRDVALAHIKAFETPS 244

Query:   259 SYGRYLCFNHVINCNEDAMKLAR 281
             + GRY+    V+  N D  K+ R
Sbjct:   245 ANGRYIIEGPVVTIN-DIEKILR 266

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

TAIR|locus:2033904 AT1G51410 [Arabidopsis thaliana (taxid:3702)]

 Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
 Identities = 95/264 (35%), Positives = 146/264 (55%)

Query:    22 SSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKV 81
             SS   KTVCV  ASG+ AS +V+ LLLRGYTV A++ +    +  E  L     E++LK+
Sbjct:     2 SSEEEKTVCVTGASGYIASWIVKLLLLRGYTVKASVRDPNDPRKTEHLLALEGAEERLKL 61

Query:    82 FQADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAH---NVLEACAQTN 138
             F+A+  +  S  +A+ GC G+F++  P   H   D   AE+   A     NVL +C +T+
Sbjct:    62 FKANLLEEGSFDSAIDGCEGVFHTASP-FYHDVKDP-QAELLDPAVKGTINVLSSCLKTS 119

Query:   139 TVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWAL 198
             +V +VV TSS+ AV +N     P +   DE  ++D + C+  KLW+ LSKTLAE  AW  
Sbjct:   120 SVKRVVLTSSIAAVAFNGMPRTPETI-VDETWFADPDYCRASKLWYVLSKTLAENAAWKF 178

Query:   199 AMDRGISMVSINGGLVMGP--DVTISNP------YLKGAAEMYEDGVMASVDLRFYVDAH 250
             A +  + +VSIN  +V+GP    T++         +KGA + + +     V+++   +AH
Sbjct:   179 AKENNLQLVSINPAMVIGPLLQPTLNTSAAAVLSLIKGA-QTFPNATFGWVNVKDVANAH 237

Query:   251 ICVFEDVSSYGRYLCFNHVINCNE 274
             I  FE+  + GRY     V + +E
Sbjct:   238 IQAFENPDADGRYCLVERVAHYSE 261

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

GO:0048610 "cellular process involved in reproduction" evidence=RCA

GO:0048868 "pollen tube development" evidence=RCA

TAIR|locus:2200427 CCR1 "cinnamoyl coa reductase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 93/251 (37%), Positives = 137/251 (54%)

Query:    22 SSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKV 81
             +S A KTVCV  A G+ AS +V+ LL RGYTV   + N    +      +   +E+ L +
Sbjct:     6 ASPAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKER-LIL 64

Query:    82 FQADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD 141
              +AD  DY +L  A+ GC G+F++  P +D     E   E     A  V+ A A+   V 
Sbjct:    65 CKADLQDYEALKAAIDGCDGVFHTASPVTDDP---EQMVEPAVNGAKFVINAAAEAK-VK 120

Query:   142 KVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD 201
             +VV TSS+ AV  + +RD P +   DE  WSD++ CK  K W+   K +AE+ AW  A +
Sbjct:   121 RVVITSSIGAVYMDPNRD-PEAV-VDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKE 178

Query:   202 RGISMVSINGGLVMGPDV--TISNP------YLKGAAEMYEDGVMASVDLRFYVDAHICV 253
             +G+ +V +N  LV+GP +  TI+        YL G+A+ Y +   A VD+R    AH+ V
Sbjct:   179 KGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLV 238

Query:   254 FEDVSSYGRYL 264
             +E  S+ GRYL
Sbjct:   239 YEAPSASGRYL 249

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0050662 "coenzyme binding" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=IDA

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006623 "protein targeting to vacuole" evidence=RCA

GO:0007623 "circadian rhythm" evidence=IEP

GO:0009409 "response to cold" evidence=IEP

TAIR|locus:2122093 DRL1 "dihydroflavonol 4-reductase-like1" [Arabidopsis thaliana (taxid:3702)]

 Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
 Identities = 88/258 (34%), Positives = 139/258 (53%)

Query:    29 VCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFD 88
             VCV  ASG  AS LV+RLLL GY V   + + G  + +         +++L++ +AD  +
Sbjct:     8 VCVTGASGFLASWLVKRLLLEGYEVIGTVRDPGNEKKLAHLWKLEGAKERLRLVKADLME 67

Query:    89 YHSLVNALKGCSGLFYSFEP---PSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVF 145
               S  NA+ GC G+F++  P   P+ +   + L   +E     NVL +C +  ++ +VV 
Sbjct:    68 EGSFDNAIMGCQGVFHTASPVLKPTSNPEEEILRPAIE--GTLNVLRSCRKNPSLKRVVL 125

Query:   146 TSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGIS 205
             TSS + V   +  D P     DE  W+ V LCK+F++W+ LSKTLAE+ AW  + + GI 
Sbjct:   126 TSSSSTVRIRDDFD-PKI-PLDESIWTSVELCKRFQVWYALSKTLAEQAAWKFSEENGID 183

Query:   206 MVSINGGLVMGPDV------TISNPY--LKGAAEMYE-DGVMASVDLRFYVDAHICVFED 256
             +V++    ++GP +      T S+    LKG  E ++  G M  V +      HI VFE 
Sbjct:   184 LVTVLPSFLVGPSLPPDLCSTASDVLGLLKGETEKFQWHGQMGYVHIDDVARTHIVVFEH 243

Query:   257 VSSYGRYLCFNHVINCNE 274
              ++ GRY+C ++VI+  E
Sbjct:   244 EAAQGRYICSSNVISLEE 261

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0009555 "pollen development" evidence=IMP

GO:0048316 "seed development" evidence=IMP

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0010584 "pollen exine formation" evidence=IMP

GO:0080110 "sporopollenin biosynthetic process" evidence=IMP

TAIR|locus:2150315 AT5G19440 [Arabidopsis thaliana (taxid:3702)]

 Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 88/261 (33%), Positives = 141/261 (54%)

Query:    22 SSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKV 81
             +S   K VCV  ASG+ AS LV+ LL RGYTV A++ +    +  +  +     +++L +
Sbjct:     3 NSGEGKVVCVTGASGYIASWLVKFLLSRGYTVKASVRDPSDPKKTQHLVSLEGAKERLHL 62

Query:    82 FQADPFDYHSLVNALKGCSGLFYSFEPP-SDHSTYDELTAEVETMAAHNVLEACAQTNTV 140
             F+AD  +  S  +A+ GC G+F++  P  +D         +       NVL +CA+ ++V
Sbjct:    63 FKADLLEQGSFDSAIDGCHGVFHTASPFFNDAKDPQAELIDPAVKGTLNVLNSCAKASSV 122

Query:   141 DKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAM 200
              +VV TSS+ AV +N     P     DE  +SD  LC+  K+W+ LSKTLAE  AW LA 
Sbjct:   123 KRVVVTSSMAAVGYNGKPRTPDV-TVDETWFSDPELCEASKMWYVLSKTLAEDAAWKLAK 181

Query:   201 DRGISMVSINGGLVMGP--DVTISNPY-----LKGAAEMYEDGVMASVDLRFYVDAHICV 253
             ++G+ +V+IN  +V+GP    T++        L   A+ + +     V+++   +AHI  
Sbjct:   182 EKGLDIVTINPAMVIGPLLQPTLNTSAAAILNLINGAKTFPNLSFGWVNVKDVANAHIQA 241

Query:   254 FEDVSSYGRYLCFNHVINCNE 274
             FE  S+ GRY     V++ +E
Sbjct:   242 FEVPSANGRYCLVERVVHHSE 262

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA

TAIR|locus:2025832 CCR2 "cinnamoyl coa reductase" [Arabidopsis thaliana (taxid:3702)]

 Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 93/264 (35%), Positives = 135/264 (51%)

Query:    27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIE-EELINYNEEKKLKVFQAD 85
             K VCV  A G+ AS +V+ LL RGYTV   + N    +     EL    E  +L +  AD
Sbjct:     6 KLVCVTGAGGYIASWIVKLLLERGYTVRGTVRNPTDPKNNHLRELQGAKE--RLTLHSAD 63

Query:    86 PFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVF 145
               DY +L   + GC G+F++  P +D     E   E     A  V++A A+   V +VVF
Sbjct:    64 LLDYEALCATIDGCDGVFHTASPMTDDP---ETMLEPAVNGAKFVIDAAAKAK-VKRVVF 119

Query:   146 TSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGIS 205
             TSS+ AV  N +RD  T    DE  WSD++ CK  K W+   K LAE++AW  A  +G+ 
Sbjct:   120 TSSIGAVYMNPNRD--TQAIVDENCWSDLDFCKNTKNWYCYGKMLAEQSAWETAKAKGVD 177

Query:   206 MVSINGGLVMGPDVTIS-NP-------YLKGAAEMYEDGVMASVDLRFYVDAHICVFEDV 257
             +V +N  LV+GP +  + N        YL G+A+ Y +     VD+R     H+ V+E  
Sbjct:   178 LVVLNPVLVLGPPLQSAINASLVHILKYLTGSAKTYANLTQVYVDVRDVALGHVLVYEAP 237

Query:   258 SSYGRYLCFNHVINCNEDAMKLAR 281
             S+ GRY+     ++  E    LA+
Sbjct:   238 SASGRYILAETALHRGEVVEILAK 261

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0009809 "lignin biosynthetic process" evidence=NAS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=IDA

GO:0010200 "response to chitin" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

GO:0007623 "circadian rhythm" evidence=IEP

GO:0009409 "response to cold" evidence=IEP

GO:0042754 "negative regulation of circadian rhythm" evidence=IMP

TAIR|locus:2171258 AT5G58490 [Arabidopsis thaliana (taxid:3702)]

 Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
 Identities = 92/267 (34%), Positives = 139/267 (52%)

Query:    27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHN-HGKLQCIEEELINYNEEKKLKVFQAD 85
             + VCV  ASG   S LV +LLLRGY+VHA + N   + +    E +      +L +F+ D
Sbjct:     7 EVVCVTGASGCIGSWLVHQLLLRGYSVHATVKNLQDEKETKHLEGLE-GAATRLHLFEMD 65

Query:    86 PFDYHSLVNALKGCSGLFYSFEPPSDHSTYD--ELTAEVETMAAHNVLEACAQTNTVDKV 143
                Y ++  A+ GCSG+F+   P       D  +   +       NVL A A+  +V +V
Sbjct:    66 LLQYDTVSAAINGCSGVFHLASPCIVDEVQDPQKQLLDPAVKGTINVLTA-AKEASVKRV 124

Query:   144 VFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRG 203
             V TSS++A+  + +   P     +E  W+  + C++  LW+ LSKTLAEK AW  A ++G
Sbjct:   125 VVTSSISAITPSPNW--PADKIKNEECWAAEDYCRQNGLWYPLSKTLAEKAAWEFAEEKG 182

Query:   204 ISMVSINGGLVMGPDVTIS-NP-------YLKGAAEMYEDGVMASVDLRFYVDAHICVFE 255
             + +V +N G VMGP +  S N         L+G  E YE+  M SV  +    AHI V+E
Sbjct:   183 LDVVVVNPGTVMGPVIPPSLNASMHMLLRLLQGCTETYENFFMGSVHFKDVALAHILVYE 242

Query:   256 DVSSYGRYLCFNHVINCNEDAMKLARM 282
             D  S GR+LC   + +  +   K+A +
Sbjct:   243 DPYSKGRHLCVEAISHYGDFVAKVAEL 269

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.XIII.2619.1 cinnamoyl-CoA reductase (EC-1.2.1.44) (301 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	294
PLN02583	297	PLN02583, PLN02583, cinnamoyl-CoA reductase	1e-169
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	1e-111
PLN02686	367	PLN02686, PLN02686, cinnamoyl-CoA reductase	1e-65
PLN02662	322	PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase	1e-47
PLN02986	322	PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase	2e-38
PLN02214	342	PLN02214, PLN02214, cinnamoyl-CoA reductase	4e-37
PLN02650	351	PLN02650, PLN02650, dihydroflavonol-4-reductase	9e-35
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	2e-32
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	7e-32
PLN00198	338	PLN00198, PLN00198, anthocyanidin reductase; Provi	3e-30
PLN02896	353	PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase	1e-29
PLN02989	325	PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase	3e-29
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	2e-18
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	5e-12
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	3e-10
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	6e-08
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	6e-08
TIGR04180	297	TIGR04180, EDH_00030, NAD dependent epimerase/dehy	1e-07
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	6e-07
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	9e-07
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	1e-06
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	3e-06
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	7e-06
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	1e-05
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	5e-05
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	1e-04
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	4e-04
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	5e-04
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	7e-04
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	9e-04
cd09811	354	cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD	0.001
COG1086	588	COG1086, COG1086, Predicted nucleoside-diphosphate	0.001
pfam02719	280	pfam02719, Polysacc_synt_2, Polysaccharide biosynt	0.002

>gnl|CDD|178195 PLN02583, PLN02583, cinnamoyl-CoA reductase

 Score =  469 bits (1208), Expect = e-169
 Identities = 171/275 (62%), Positives = 214/275 (77%), Gaps = 5/275 (1%)

Query: 21  DSSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINY--NEEKK 78
               ++K+VCVMDASG+    LV+RLL RGYTVHAA+  +G+ +   E+ I     EE++
Sbjct: 1   SFDESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEI--EKEIRGLSCEEER 58

Query: 79  LKVFQADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTN 138
           LKVF  DP DYHS+++ALKGCSGLF  F+PPSD+ +YDE   +VE  AAHNVLEACAQT+
Sbjct: 59  LKVFDVDPLDYHSILDALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTD 118

Query: 139 TVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWAL 198
           T++KVVFTSSLTAV+W +   + T  D DER+WSD N C+KFKLWH L+KTL+EKTAWAL
Sbjct: 119 TIEKVVFTSSLTAVIWRDDNIS-TQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWAL 177

Query: 199 AMDRGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVS 258
           AMDRG++MVSIN GL+MGP +T  NPYLKGAA+MYE+GV+ +VD+ F VDAHI  FEDVS
Sbjct: 178 AMDRGVNMVSINAGLLMGPSLTQHNPYLKGAAQMYENGVLVTVDVNFLVDAHIRAFEDVS 237

Query: 259 SYGRYLCFNHVINCNEDAMKLARMLLPPSDTSTPP 293
           SYGRYLCFNH++N  EDA+KLA+ML P   +  P 
Sbjct: 238 SYGRYLCFNHIVNTEEDAVKLAQMLSPLIPSPPPY 272

Length = 297

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score =  323 bits (830), Expect = e-111
 Identities = 114/265 (43%), Positives = 151/265 (56%), Gaps = 15/265 (5%)

Query: 29  VCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIE--EELINYNEEKKLKVFQADP 86
           VCV  ASG   S LV+RLL RGYTV A + + G  + +    EL    E  +LK+F+AD 
Sbjct: 1   VCVTGASGFIGSWLVKRLLQRGYTVRATVRDPGDEKKVAHLLELEGAKE--RLKLFKADL 58

Query: 87  FDYHSLVNALKGCSGLFYSFEPPSDHSTYDELT-AEVETMAAHNVLEACAQTNTVDKVVF 145
            DY S   A+ GC G+F+   P    S   E    E       NVLEACA+  +V +VVF
Sbjct: 59  LDYGSFDAAIDGCDGVFHVASPVDFDSEDPEEEMIEPAVKGTLNVLEACAKAKSVKRVVF 118

Query: 146 TSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGIS 205
           TSS+ AVVWN   +       DE  WSD++ CKK KLW+ LSKTLAEK AW  A + G+ 
Sbjct: 119 TSSVAAVVWN--PNRGEGKVVDESCWSDLDFCKKTKLWYALSKTLAEKAAWEFAEENGLD 176

Query: 206 MVSINGGLVMGPDVTISNP--------YLKGAAEMYEDGVMASVDLRFYVDAHICVFEDV 257
           +V++N  LV+GP +  S           LKG AEMY++G +A V +    DAHI ++E  
Sbjct: 177 LVTVNPSLVVGPFLQPSLNSSSQLILSLLKGNAEMYQNGSLALVHVDDVADAHILLYEKP 236

Query: 258 SSYGRYLCFNHVINCNEDAMKLARM 282
           S+ GRY+C +HV+   E A  LA+ 
Sbjct: 237 SASGRYICSSHVVTRPELAALLAKK 261

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|215370 PLN02686, PLN02686, cinnamoyl-CoA reductase

 Score =  209 bits (533), Expect = 1e-65
 Identities = 108/316 (34%), Positives = 156/316 (49%), Gaps = 33/316 (10%)

Query: 3   PPASSGIEEEIAVDRDGYDSSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK 62
                G E                + VCV         A+V RLL  GY+V  A+     
Sbjct: 34  GSRGGGKEANAGDAGAD----AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQED 89

Query: 63  LQCIEE-ELINYNEEKK--LKVFQADPFDYHSLVNALKGCSGLFY--SFEPPSDHSTYDE 117
            + + E E+          +    A+  +  SL  A  GC+G+F+  +F  P+  S Y +
Sbjct: 90  KEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDGCAGVFHTSAFVDPAGLSGYTK 149

Query: 118 LTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDF----DERNWSD 173
             AE+E  A+ NV+EAC +T +V K VFTSSL A VW   R N   HD     DE +WSD
Sbjct: 150 SMAELEAKASENVIEACVRTESVRKCVFTSSLLACVW---RQNYP-HDLPPVIDEESWSD 205

Query: 174 VNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-----YLKG 228
            + C+  KLW+ L K  AEK AW  A  +G+ + +I   LV GP     N      YLKG
Sbjct: 206 ESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIAYLKG 265

Query: 229 AAEMYEDGVMASVDLRFYVDAHICVFE---DVSSYGRYLCFNHVINCNEDAMKLARMLLP 285
           A EM  DG++A+ D+    +AH+CV+E   + +++GRY+CF+HV++  ++A +LAR +  
Sbjct: 266 AQEMLADGLLATADVERLAEAHVCVYEAMGNKTAFGRYICFDHVVSREDEAEELARQIGL 325

Query: 286 P--------SDTSTPP 293
           P        S   TP 
Sbjct: 326 PINKIAGNSSSDDTPA 341

Length = 367

>gnl|CDD|178268 PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase family protein

 Score =  161 bits (410), Expect = 1e-47
 Identities = 100/278 (35%), Positives = 146/278 (52%), Gaps = 24/278 (8%)

Query: 23  SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVF 82
           S   K VCV  ASG+ AS LV+ LL RGYTV A + +    +  E  L     +++L +F
Sbjct: 1   SGEGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLF 60

Query: 83  QADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAH---NVLEACAQTNT 139
           +A+  +  S  + + GC G+F++  P   H   D   AE+   A     NVL +CA+  +
Sbjct: 61  KANLLEEGSFDSVVDGCEGVFHTASPFY-HDVTDP-QAELIDPAVKGTLNVLRSCAKVPS 118

Query: 140 VDKVVFTSSLTAVVWNNHRDNPTSHD--FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWA 197
           V +VV TSS+ AV +N     P + D   DE  +SD   C++ KLW+ LSKTLAE+ AW 
Sbjct: 119 VKRVVVTSSMAAVAYNG---KPLTPDVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWK 175

Query: 198 LAMDRGISMVSINGGLVMGPDVTISNPYLKGAAEM----------YEDGVMASVDLRFYV 247
            A + GI MV+IN  +V+GP   +  P L  +AE           + +     VD+R   
Sbjct: 176 FAKENGIDMVTINPAMVIGP---LLQPTLNTSAEAILNLINGAQTFPNASYRWVDVRDVA 232

Query: 248 DAHICVFEDVSSYGRYLCFNHVINCNEDAMKLARMLLP 285
           +AHI  FE  S+ GRY     V++ +E  +K+   L P
Sbjct: 233 NAHIQAFEIPSASGRYCLVERVVHYSE-VVKILHELYP 269

Length = 322

>gnl|CDD|178567 PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase family protein

 Score =  137 bits (346), Expect = 2e-38
 Identities = 92/271 (33%), Positives = 138/271 (50%), Gaps = 18/271 (6%)

Query: 27  KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADP 86
           K VCV  ASG+ AS +V+ LLLRGYTV A + +    +  E  L     +++LK+F+AD 
Sbjct: 6   KLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADL 65

Query: 87  FDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETM--AAHNVLEACAQTNTVDKVV 144
            +  S   A++GC  +F++   P   +  D  T  ++       NVL  C +T +V +V+
Sbjct: 66  LEESSFEQAIEGCDAVFHT-ASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVI 124

Query: 145 FTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGI 204
            TSS  AV++        +   DE  +SD +LC++ K W+ LSK LAE  AW  A D GI
Sbjct: 125 LTSSTAAVLFRQPPIEA-NDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDNGI 183

Query: 205 SMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMAS----------VDLRFYVDAHICVF 254
            MV +N G + GP   +  P L  + E+  D +             VD+R    AHI   
Sbjct: 184 DMVVLNPGFICGP---LLQPTLNFSVELIVDFINGKNLFNNRFYRFVDVRDVALAHIKAL 240

Query: 255 EDVSSYGRYLCFNHVINCNEDAMKLARMLLP 285
           E  S+ GRY+    +++ N D + + R L P
Sbjct: 241 ETPSANGRYIIDGPIMSVN-DIIDILRELFP 270

Length = 322

>gnl|CDD|177862 PLN02214, PLN02214, cinnamoyl-CoA reductase

 Score =  134 bits (338), Expect = 4e-37
 Identities = 92/251 (36%), Positives = 135/251 (53%), Gaps = 15/251 (5%)

Query: 22  SSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKV 81
           +S A KTVCV  A G+ AS +V+ LL RGYTV   + N    +      +   +E+ L +
Sbjct: 6   ASPAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKER-LIL 64

Query: 82  FQADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD 141
            +AD  DY +L  A+ GC G+F++  P +D     E   E     A  V+ A A+   V 
Sbjct: 65  CKADLQDYEALKAAIDGCDGVFHTASPVTDDP---EQMVEPAVNGAKFVINAAAEAK-VK 120

Query: 142 KVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD 201
           +VV TSS+ AV  + +RD       DE  WSD++ CK  K W+   K +AE+ AW  A +
Sbjct: 121 RVVITSSIGAVYMDPNRDPEAV--VDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKE 178

Query: 202 RGISMVSINGGLVMGPDV--TISNP------YLKGAAEMYEDGVMASVDLRFYVDAHICV 253
           +G+ +V +N  LV+GP +  TI+        YL G+A+ Y +   A VD+R    AH+ V
Sbjct: 179 KGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLV 238

Query: 254 FEDVSSYGRYL 264
           +E  S+ GRYL
Sbjct: 239 YEAPSASGRYL 249

Length = 342

>gnl|CDD|178256 PLN02650, PLN02650, dihydroflavonol-4-reductase

 Score =  128 bits (323), Expect = 9e-35
 Identities = 91/278 (32%), Positives = 144/278 (51%), Gaps = 29/278 (10%)

Query: 23  SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVF 82
            +  +TVCV  ASG   S LV RLL RGYTV A + +   ++ ++  L       +L ++
Sbjct: 2   GSQKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLW 61

Query: 83  QADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDE---LTAEVETMAAHNVLEACAQTNT 139
           +AD     S  +A++GC+G+F+   P    S   E   +   V  M   ++++ACA+  T
Sbjct: 62  KADLAVEGSFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGML--SIMKACAKAKT 119

Query: 140 VDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL--W-HGLSKTLAEKTAW 196
           V ++VFTSS   V    H+       +DE  WSD++ C++ K+  W + +SKTLAEK AW
Sbjct: 120 VRRIVFTSSAGTVNVEEHQKPV----YDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAW 175

Query: 197 ALAMDRGISMVSINGGLVMGPDVTISNP--------YLKGAAEMYEDGVMAS---VDLRF 245
             A + G+  +SI   LV+GP ++ S P         + G    Y   ++     V L  
Sbjct: 176 KYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHY--SIIKQGQFVHLDD 233

Query: 246 YVDAHICVFEDVSSYGRYLCFNHVINCNEDAMKLARML 283
             +AHI +FE  ++ GRY+C +H    ++    LA+ML
Sbjct: 234 LCNAHIFLFEHPAAEGRYICSSHDATIHD----LAKML 267

Length = 351

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score =  121 bits (305), Expect = 2e-32
 Identities = 71/273 (26%), Positives = 111/273 (40%), Gaps = 22/273 (8%)

Query: 28  TVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPF 87
            V V  A+G  AS +V +LL  GY V   + +  K   ++  L       +L+    D  
Sbjct: 1   LVLVTGATGFIASHIVEQLLKAGYKVRGTVRSLSKSAKLKALLKAAGYNDRLEFVIVDDL 60

Query: 88  -DYHSLVNALKGCSGLFY---SFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKV 143
              ++   ALKG   + +    F      +  D +   VE     NVLEA     +V +V
Sbjct: 61  TAPNAWDEALKGVDYVIHVASPFPFTGPDAEDDVIDPAVE--GTLNVLEAAKAAGSVKRV 118

Query: 144 VFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLW-HGLSKTLAEKTAWAL--AM 200
           V TSS+ AV   +         F E +W+D+ + K   L  +  SKTLAEK AW      
Sbjct: 119 VLTSSVAAVG--DPTAEDPGKVFTEEDWNDLTISKSNGLDAYIASKTLAEKAAWEFVKEN 176

Query: 201 DRGISMVSINGGLVMGPDVTI-----SNPYLKGAAEMYEDGVMAS-----VDLRFYVDAH 250
                +++IN G V+GP +       SN  +    +     +  +     VD+R   DAH
Sbjct: 177 KPKFELITINPGYVLGPSLLADELNSSNELINKLLDGKLPAIPPNLPFGYVDVRDVADAH 236

Query: 251 ICVFED-VSSYGRYLCFNHVINCNEDAMKLARM 282
           +   E   ++  R++      +  E A  L   
Sbjct: 237 VRALESPEAAGQRFIVSAGPFSFQEIADLLREE 269

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score =  119 bits (299), Expect = 7e-32
 Identities = 76/270 (28%), Positives = 117/270 (43%), Gaps = 21/270 (7%)

Query: 29  VCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFD 88
           V V  ASG  AS +V +LL RGY V A + +  K++ +   L    +  +L++  AD  D
Sbjct: 1   VLVTGASGFVASHVVEQLLERGYKVRATVRDPSKVKKVNHLLDLDAKPGRLELAVADLTD 60

Query: 89  YHSLVNALKGCSGLFYSFEPPSDHSTY-DEL-TAEVETMAAHNVLEACAQTNTVDKVVFT 146
             S    +KGC+G+F+   P S  S   +E+    +      N L+A A   +V + V T
Sbjct: 61  EQSFDEVIKGCAGVFHVATPVSFSSKDPNEVIKPAIGGTL--NALKAAAAAKSVKRFVLT 118

Query: 147 SSLTAVVWNNHRDNPTSHDFDERNWSDVNLC--KKFKLW-HGLSKTLAEKTAWALAMDRG 203
           SS  +V+    + N      DE++W+        K   W +  SKTLAEK AW  A +  
Sbjct: 119 SSAGSVLIP--KPNVEGIVLDEKSWNLEEFDSDPKKSAWVYAASKTLAEKAAWKFADENN 176

Query: 204 ISMVSINGGLVMGPDVTISNPYLKGAA------EMYEDGVMASVDLRFYVD------AHI 251
           I ++++   L +G       P   G A             +A +   +YV       AHI
Sbjct: 177 IDLITVIPTLTIGTIFDSETPSSSGWAMSLITGNEGVSPALALIPPGYYVHVVDICLAHI 236

Query: 252 CVFEDVSSYGRYLCFNHVINCNEDAMKLAR 281
              E   + GRY+C     + N     L +
Sbjct: 237 GCLELPIARGRYICTAGNFDWNTLLKTLRK 266

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|215100 PLN00198, PLN00198, anthocyanidin reductase; Provisional

 Score =  116 bits (291), Expect = 3e-30
 Identities = 82/261 (31%), Positives = 124/261 (47%), Gaps = 27/261 (10%)

Query: 27  KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADP 86
           KT CV+  +G  AS L++ LL +GY V+  + +    + I   L    E   LK+F AD 
Sbjct: 10  KTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH-LRALQELGDLKIFGADL 68

Query: 87  FDYHSLVNALKGCSGLFYSFEP---PSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKV 143
            D  S    + GC  +F+   P    S+    D +   ++    HNVL+ACA+  +V +V
Sbjct: 69  TDEESFEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQ--GVHNVLKACAKAKSVKRV 126

Query: 144 VFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLC---KKFKLWHGLSKTLAEKTAWALAM 200
           + TSS  AV  N    + T    +E+NW+DV      K     +  SKTLAEK AW  A 
Sbjct: 127 ILTSSAAAVSINK--LSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAE 184

Query: 201 DRGISMVSINGGLVMGPDVTISNPYLKGAA-------EMYEDGV----MASVDLRF-YVD 248
           +  I ++++   L+ GP +T   P     A       E   +G+    M S  +   +V+
Sbjct: 185 ENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVE 244

Query: 249 ----AHICVFEDVSSYGRYLC 265
               AHI + E  S+ GRY+C
Sbjct: 245 DVCRAHIFLAEKESASGRYIC 265

Length = 338

>gnl|CDD|178484 PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase

 Score =  114 bits (288), Expect = 1e-29
 Identities = 89/301 (29%), Positives = 145/301 (48%), Gaps = 52/301 (17%)

Query: 23  SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVF 82
            +AT T CV  A+G+  S LV+ LL RGYTVHA L +  K   +   L  + E  +L++F
Sbjct: 7   ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHL---LSKWKEGDRLRLF 63

Query: 83  QADPFDYHSLVNALKGCSGLFY-----SFEPPSDHSTYDELTA----EVETMAAHNVLEA 133
           +AD  +  S   A+KGC G+F+      F+  SDH+  +E       +       NVL++
Sbjct: 64  RADLQEEGSFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKS 123

Query: 134 CAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVN-LCK---------KFKLW 183
           C ++ TV +VVFTSS++ +         T+ D + R  + V+  C+         K   W
Sbjct: 124 CLKSKTVKRVVFTSSISTL---------TAKDSNGRWRAVVDETCQTPIDHVWNTKASGW 174

Query: 184 -HGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPY--------LKGAAEMYE 234
            + LSK L E+ A+  A + GI +VS+    V GP +T S P         + G ++++ 
Sbjct: 175 VYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFS 234

Query: 235 DGVMASVDLRF----------YVDAHICVFEDVSSYGRYLCFNHVINCNEDAMKLARMLL 284
             ++++V+ R             DAHI + E   + GRY+C     + +E    L++   
Sbjct: 235 --ILSAVNSRMGSIALVHIEDICDAHIFLMEQTKAEGRYICCVDSYDMSELINHLSKEYP 292

Query: 285 P 285
            
Sbjct: 293 C 293

Length = 353

>gnl|CDD|178569 PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase family protein

 Score =  113 bits (283), Expect = 3e-29
 Identities = 84/278 (30%), Positives = 136/278 (48%), Gaps = 23/278 (8%)

Query: 23  SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVF 82
           ++  K VCV  ASG+ AS +V+ LL RGYT++A + +    +  +  L     +++LK+F
Sbjct: 2   ADGGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLF 61

Query: 83  QADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETM-----AAHNVLEACAQT 137
           +AD  D  S   A+ GC  +F++  P +     D    +VE +        NVL  C + 
Sbjct: 62  KADLLDEGSFELAIDGCETVFHTASPVAITVKTD---PQVELINPAVNGTINVLRTCTKV 118

Query: 138 NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWA 197
           ++V +V+ TSS+ AV+    +  P     DE  +++ +  ++ K W+ LSKTLAE  AW 
Sbjct: 119 SSVKRVILTSSMAAVLAPETKLGPNDV-VDETFFTNPSFAEERKQWYVLSKTLAEDAAWR 177

Query: 198 LAMDRGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMAS----------VDLRFYV 247
            A D  I ++ +N GLV GP   I  P L  +  +  + +             VD+R   
Sbjct: 178 FAKDNEIDLIVLNPGLVTGP---ILQPTLNFSVAVIVELMKGKNPFNTTHHRFVDVRDVA 234

Query: 248 DAHICVFEDVSSYGRYLCFNHVINCNEDAMKLARMLLP 285
            AH+   E  S+ GRY+    V+   +D   + R   P
Sbjct: 235 LAHVKALETPSANGRYIIDGPVVTI-KDIENVLREFFP 271

Length = 325

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 83.1 bits (206), Expect = 2e-18
 Identities = 64/245 (26%), Positives = 89/245 (36%), Gaps = 40/245 (16%)

Query: 34  ASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLV 93
           A+G   S LVR LL +GY V A + +          L        ++V + D  D  SL 
Sbjct: 6   ATGFLGSNLVRALLAQGYRVRALVRSGSDA----VLLDGLP----VEVVEGDLTDAASLA 57

Query: 94  NALKGCSGLF-----YSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSS 148
            A+KGC  +F      S         Y             NVL+A  +   V +VV TSS
Sbjct: 58  AAMKGCDRVFHLAAFTSLWAKDRKELYR-----TNVEGTRNVLDAALEAG-VRRVVHTSS 111

Query: 149 LTAVVWNNHR--DNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISM 206
           + A+        D  T  +         +  +        SK LAE      A   G+ +
Sbjct: 112 IAALGGPPDGRIDETTPWNERP---FPNDYYR--------SKLLAELEVLEAA-AEGLDV 159

Query: 207 VSINGGLVMGP-DVTIS------NPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVSS 259
           V +N   V GP D   +        YL G    Y  G  + VD+R   + HI   E    
Sbjct: 160 VIVNPSAVFGPGDEGPTSTGLDVLDYLNGKLPAYPPGGTSFVDVRDVAEGHIAAMEKGRR 219

Query: 260 YGRYL 264
             RY+
Sbjct: 220 GERYI 224

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 65.0 bits (158), Expect = 5e-12
 Identities = 42/192 (21%), Positives = 62/192 (32%), Gaps = 24/192 (12%)

Query: 31  VMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYH 90
           V   +G   S LV RLL  G+ V         L  +   +         +    D  D  
Sbjct: 5   VTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGV---------EFVVLDLTDRD 55

Query: 91  SLVNALKGCSGLFYSFEPPSDHSTYDE----LTAEVETMAAHNVLEACAQTNTVDKVVFT 146
            +    KG           S     +        +V      N+LEA      V + VF 
Sbjct: 56  LVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG-VKRFVFA 114

Query: 147 SSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISM 206
           SS  +VV+ +    P   D       +          +G+SK  AE+   A A   G+ +
Sbjct: 115 SS-VSVVYGDPPPLPIDEDLGPPRPLNP---------YGVSKLAAEQLLRAYARLYGLPV 164

Query: 207 VSINGGLVMGPD 218
           V +    V GP 
Sbjct: 165 VILRPFNVYGPG 176

Length = 314

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score = 60.0 bits (146), Expect = 3e-10
 Identities = 66/254 (25%), Positives = 105/254 (41%), Gaps = 42/254 (16%)

Query: 27  KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADP 86
             V V  A+G   SA+VR LL +G  V   +      + +        E   +++ + D 
Sbjct: 1   MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL--------EGLDVEIVEGDL 52

Query: 87  FDYHSLVNALKGCSGLFYSFEPPSDH--STYDELTAEVETMAAHNV------LEACAQTN 138
            D  SL  A+ GC  LF        H  + Y     + E M A NV      L A A   
Sbjct: 53  RDPASLRKAVAGCRALF--------HVAADYRLWAPDPEEMYAANVEGTRNLLRA-ALEA 103

Query: 139 TVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDV-NLCKKFKLWHGLSKTLAEKTAWA 197
            V++VV+TSS+  +     R + T    DE   S + ++   +K     SK LAE+ A  
Sbjct: 104 GVERVVYTSSVATL---GVRGDGTPA--DETTPSSLDDMIGHYK----RSKFLAEQAALE 154

Query: 198 LAMDRGISMVSINGGLVMGP-DVTISNP------YLKGAAEMYEDGVMASVDLRFYVDAH 250
           +A ++G+ +V +N    +GP D+  +        +L G    Y D  +  V +    + H
Sbjct: 155 MAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGH 214

Query: 251 ICVFEDVSSYGRYL 264
           +   E      RY+
Sbjct: 215 LLALERGRIGERYI 228

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 51.5 bits (124), Expect = 6e-08
 Identities = 29/124 (23%), Positives = 42/124 (33%), Gaps = 23/124 (18%)

Query: 34  ASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLV 93
           A+G     LV+ LL RG+ V A   N  K                +   Q D FD   L 
Sbjct: 6   ATGKTGRRLVKELLARGHQVTALSRNPSKAP-----------APGVTPVQKDLFDLADLA 54

Query: 94  NALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVV 153
            AL G   +  +F    D S               ++L+A A+   V ++V  S+     
Sbjct: 55  EALAGVDAVVDAFGARPDDSD-----------GVKHLLDAAARAG-VRRIVVVSAAGLYR 102

Query: 154 WNNH 157
               
Sbjct: 103 DEPG 106

Length = 182

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 52.3 bits (126), Expect = 6e-08
 Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 12/123 (9%)

Query: 29  VCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFD 88
           V V  A+G+    LV RLL  G+ V A + +        E+L +    +++ V + D  D
Sbjct: 1   VLVTGATGYVGGRLVPRLLQEGHQVRALVRS-------PEKLADRPWSERVTVVRGDLED 53

Query: 89  YHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSS 148
             SL  AL+G    +Y          +     E +  AA N   A A+   V ++++   
Sbjct: 54  PESLRAALEGIDTAYYLVHSMGSGGDF----EEADRRAARNFARA-ARAAGVKRIIYLGG 108

Query: 149 LTA 151
           L  
Sbjct: 109 LIP 111

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family

 Score = 51.5 bits (124), Expect = 1e-07
 Identities = 43/136 (31%), Positives = 59/136 (43%), Gaps = 31/136 (22%)

Query: 29  VCVMDASGHFASALVRRLLLRGYTVHA-ALHNH----GKLQCIEEELINYNEEKKLKVFQ 83
           V V  A G   S LV  L+ +GY V A  L+N     G L     E+ +     K++V  
Sbjct: 1   VLVTGADGFIGSHLVEALVRQGYEVRAFVLYNSFNSWGWLDTSPPEVKD-----KIEVVT 55

Query: 84  ADPFDYHSLVNALKGCSGLF---------YSFEPPSDHSTYDELTAEVET--MAAHNVLE 132
            D  D  S+  A+KGC  +F         YS+  P    +Y      V+T      NVL+
Sbjct: 56  GDIRDPDSVRKAMKGCDVVFHLAALIAIPYSYIAP---DSY------VDTNVTGTLNVLQ 106

Query: 133 ACAQTNTVDKVVFTSS 148
           A      V+KVV TS+
Sbjct: 107 AARDLG-VEKVVHTST 121

This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score = 49.6 bits (119), Expect = 6e-07
 Identities = 45/187 (24%), Positives = 68/187 (36%), Gaps = 30/187 (16%)

Query: 28  TVCVMDASGHFASALVRRLLLRGYTVHA-ALHNHGKLQCIEEELINYNEEKKLKVFQADP 86
            V V  A G   S L  RLL  G+ V A  ++N          L++     +      D 
Sbjct: 1   NVLVTGADGFIGSHLTERLLREGHEVRALDIYNSF----NSWGLLDNAVHDRFHFISGDV 56

Query: 87  FDYHSLVNALKGCSGLF---------YSFEPPSDHSTYDELTAEVETMAAHNVLEACAQT 137
            D   +   +K C  +F         YS+  P           E       NVLEA A  
Sbjct: 57  RDASEVEYLVKKCDVVFHLAALIAIPYSYTAPLS-------YVETNVFGTLNVLEA-ACV 108

Query: 138 NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWA 197
               +VV TS  T+ V+   +D P     DE +   +    K +  +  SK  A++ A++
Sbjct: 109 LYRKRVVHTS--TSEVYGTAQDVP----IDEDH--PLLYINKPRSPYSASKQGADRLAYS 160

Query: 198 LAMDRGI 204
                G+
Sbjct: 161 YGRSFGL 167

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 48.8 bits (117), Expect = 9e-07
 Identities = 28/118 (23%), Positives = 48/118 (40%), Gaps = 19/118 (16%)

Query: 34  ASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLV 93
           A+G   +A+V  LL +  +V A + N  K +              ++V Q D  D  +L 
Sbjct: 6   ATGKLGTAVVELLLAKVASVVALVRNPEKAKA--------FAADGVEVRQGDYDDPETLE 57

Query: 94  NALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTA 151
            A +G   L      PSD    ++   + +     N ++A  Q   V  +V+ S+  A
Sbjct: 58  RAFEGVDRLL--LISPSDL---EDRIQQHK-----NFIDAAKQAG-VKHIVYLSASGA 104

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 47.6 bits (114), Expect = 1e-06
 Identities = 31/127 (24%), Positives = 48/127 (37%), Gaps = 18/127 (14%)

Query: 28  TVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPF 87
            V V+ A+G     +VR LL RGY V A + +               E    +V   D  
Sbjct: 1   KVLVVGATGKVGRHVVRELLDRGYQVRALVRD--------PSQAEKLEAAGAEVVVGDLT 52

Query: 88  DYHSLVNALKGCSGLFYSFEPPSDHSTY---DELTAEVETMAAHNVLEACAQTNTVDKVV 144
           D  SL  AL+G   +  +        +       T  V+     N+++A  +   V + V
Sbjct: 53  DAESLAAALEGIDAVISA------AGSGGKGGPRTEAVDYDGNINLIDAAKKAG-VKRFV 105

Query: 145 FTSSLTA 151
             SS+ A
Sbjct: 106 LVSSIGA 112

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 47.3 bits (113), Expect = 3e-06
 Identities = 34/120 (28%), Positives = 47/120 (39%), Gaps = 16/120 (13%)

Query: 31  VMDASGHFASALVRRLLLR-GYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDY 89
           V  A+G    ++VR LL   G+ V A   +        + L     E    V Q D  D 
Sbjct: 3   VFGATGKQGGSVVRALLKDPGFKVRALTRDPSSPA--AKALAAPGVE----VVQGDLDDP 56

Query: 90  HSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL 149
            SL  ALKG  G+F       +    DE+          NV++A  +   V   VF SS+
Sbjct: 57  ESLEAALKGVYGVF-LVTDFWEAGGEDEIA------QGKNVVDAAKRAG-VQHFVF-SSV 107

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 45.7 bits (109), Expect = 7e-06
 Identities = 45/198 (22%), Positives = 70/198 (35%), Gaps = 36/198 (18%)

Query: 29  VCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKL--------- 79
           + V   +G   S LVRRLL  GY V       G+ +  E          +          
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEV----IVLGRRRRSESLNTGRIRFHEGDLTDPDALE 56

Query: 80  KVFQADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNT 139
           ++      D   +++     SG+  SFE P+D             +    +LEA  +   
Sbjct: 57  RLLAEVQPDA--VIHLA-AQSGVGASFEDPAD-------FIRANVLGTLRLLEAARRAG- 105

Query: 140 VDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALA 199
           V + VF SS  + V+ +  D P + D      S           +  +K  AE+   A A
Sbjct: 106 VKRFVFASS--SEVYGDVADPPITEDTPLGPLSP----------YAAAKLAAERLVEAYA 153

Query: 200 MDRGISMVSINGGLVMGP 217
              G+  V +    V GP
Sbjct: 154 RAYGLRAVILRLFNVYGP 171

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score = 45.8 bits (109), Expect = 1e-05
 Identities = 40/133 (30%), Positives = 62/133 (46%), Gaps = 14/133 (10%)

Query: 28  TVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADP 86
           +  V+  SG     LV +LL RG  TVH        ++   E     +   +++    D 
Sbjct: 1   SCLVVGGSGFLGRHLVEQLLRRGNPTVHVF-----DIRPTFELD--PSSSGRVQFHTGDL 53

Query: 87  FDYHSLVNAL--KGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVV 144
            D   L  A   KG + +F++  P  DH + D+L  +V      NV+EAC +   V K+V
Sbjct: 54  TDPQDLEKAFNEKGPNVVFHTASP--DHGSNDDLYYKVNVQGTRNVIEACRKCG-VKKLV 110

Query: 145 FTSSLTAVVWNNH 157
           +TSS  +VV+N  
Sbjct: 111 YTSS-ASVVFNGQ 122

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 43.7 bits (103), Expect = 5e-05
 Identities = 31/125 (24%), Positives = 42/125 (33%), Gaps = 15/125 (12%)

Query: 31  VMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYH 90
           V  A+G    A+VR LL RG+ V AA+ N                   ++V   D  D  
Sbjct: 5   VTGATGFVGGAVVRELLARGHEVRAAVRNPEAAA---------ALAGGVEVVLGDLRDPK 55

Query: 91  SLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLT 150
           SLV   KG  G+           +      +V  +      EA      V   V  S L 
Sbjct: 56  SLVAGAKGVDGVLLI--SGLLDGSDAFRAVQVTAVV--RAAEAAG--AGVKHGVSLSVLG 109

Query: 151 AVVWN 155
           A   +
Sbjct: 110 ADAAS 114

Length = 275

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 41.8 bits (99), Expect = 1e-04
 Identities = 29/115 (25%), Positives = 45/115 (39%), Gaps = 15/115 (13%)

Query: 34  ASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLV 93
           A+G   SA+VR  L RG+ V A + +  KL    E         KLKV Q D  D   + 
Sbjct: 7   ATGRTGSAIVREALARGHEVTALVRDPAKLPAEHE---------KLKVVQGDVLDLEDVK 57

Query: 94  NALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSS 148
            AL+G   +  +    +D S     +         N++ A      V +++    
Sbjct: 58  EALEGQDAVISALGTRNDLSPTTLHSE-----GTRNIVSAMKAAG-VKRLIVVGG 106

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 40.8 bits (96), Expect = 4e-04
 Identities = 27/144 (18%), Positives = 50/144 (34%), Gaps = 25/144 (17%)

Query: 28  TVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPF 87
           T  V+ ASG     + R L  RG+ V     +  KL  +            +++  AD  
Sbjct: 1   TAHVLGASGPIGREVARELRRRGWDVRLVSRSGSKLAWLP----------GVEIVAADAM 50

Query: 88  DYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTS 147
           D  S++ A +G   +++   P      Y         +   NV+ A        K+V   
Sbjct: 51  DASSVIAAARGADVIYHCANPA-----YTRWEELFPPLME-NVVAAAEANGA--KLVLPG 102

Query: 148 SL-------TAVVWNNHRDNPTSH 164
           ++        + +  +    PT+ 
Sbjct: 103 NVYMYGPQAGSPITEDTPFQPTTR 126

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 40.8 bits (96), Expect = 5e-04
 Identities = 43/174 (24%), Positives = 60/174 (34%), Gaps = 31/174 (17%)

Query: 31  VMDASGHFASALVRRLLLRG--YTVHAA--------LHNHGKLQCIEEELINYNEEKKLK 80
           V    G     +VR LL  G    V           L +  KLQ I              
Sbjct: 2   VTGGGGFLGRHIVRLLLREGELQEVRVFDLRFSPELLEDFSKLQVI-------------T 48

Query: 81  VFQADPFDYHSLVNALKGCSGLFYSFEPPSDHS-TYDELTAEVETMAAHNVLEACAQTNT 139
             + D  D   L  AL+G   + ++          Y +   +V      NVL+AC +   
Sbjct: 49  YIEGDVTDKQDLRRALQGSDVVIHTAAIIDVFGKAYRDTIMKVNVKGTQNVLDACVKAG- 107

Query: 140 VDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEK 193
           V  +V+TSS+  VV  N    P   + DE            +  +  SK LAEK
Sbjct: 108 VRVLVYTSSM-EVVGPNSYGQPI-VNGDE----TTPYESTHQDPYPESKALAEK 155

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 39.3 bits (92), Expect = 7e-04
 Identities = 34/138 (24%), Positives = 52/138 (37%), Gaps = 14/138 (10%)

Query: 34  ASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLV 93
           A+G    AL R LL +G+ V   + N  +L   ++E +         V + D  D  SL 
Sbjct: 6   ATGFIGRALARELLEQGHEVTLLVRNTKRLSKEDQEPVA--------VVEGDLRDLDSLS 57

Query: 94  NALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVV 153
           +A++G   + +    P D         EV+     NVLEA      V   +F SS     
Sbjct: 58  DAVQGVDVVIHLAGAPRD----TRDFCEVDVEGTRNVLEAAK-EAGVKHFIFISS-LGAY 111

Query: 154 WNNHRDNPTSHDFDERNW 171
            + H +   S        
Sbjct: 112 GDLHEETEPSPSSPYLAV 129

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score = 40.0 bits (94), Expect = 9e-04
 Identities = 38/127 (29%), Positives = 53/127 (41%), Gaps = 13/127 (10%)

Query: 29  VCVMDASGHFASALVRRLLLRGYTVHAA--LHNHGKLQCIEEELINYNEEKKLKVFQADP 86
           + V   +G   S LV RLL  G  V     L + G+ + IE E  N    K  +  + D 
Sbjct: 2   ILVTGGAGFIGSHLVDRLLEEGNEVVVVDNLSS-GRRENIEPEFEN----KAFRFVKRDL 56

Query: 87  FDYHSLVNALKGCSGLFYSFEPPSD--HSTYD-ELTAEVETMAAHNVLEACAQTNTVDKV 143
            D    V A K    +F+      D      D ++  E   +A +NVLEA      V ++
Sbjct: 57  LDTADKV-AKKDGDTVFH-LAANPDVRLGATDPDIDLEENVLATYNVLEAMRANG-VKRI 113

Query: 144 VFTSSLT 150
           VF SS T
Sbjct: 114 VFASSST 120

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs

 Score = 39.4 bits (92), Expect = 0.001
 Identities = 33/122 (27%), Positives = 50/122 (40%), Gaps = 18/122 (14%)

Query: 78  KLKVFQADPFDYHSLVNALKGCSGLFYS------FEPPSDHSTYDELTAEVETMAAHNVL 131
            +   + D  D   L  A +G S + ++      F PP+      E   EV       VL
Sbjct: 52  YVTDIEGDIKDLSFLFRACQGVSVVIHTAAIVDVFGPPNY-----EELEEVNVNGTQAVL 106

Query: 132 EACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLA 191
           EAC Q N V ++V+TSS   V   N +  P  +  ++  + D +        +  SK LA
Sbjct: 107 EACVQNN-VKRLVYTSS-IEVAGPNFKGRPIFNGVEDTPYEDTS-----TPPYASSKLLA 159

Query: 192 EK 193
           E 
Sbjct: 160 EN 161

This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354

>gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 39.9 bits (94), Expect = 0.001
 Identities = 45/202 (22%), Positives = 62/202 (30%), Gaps = 80/202 (39%)

Query: 27  KTVCVMDASGHFASALVRRLLLRGYTVHAAL----HNHGKLQCIEEELINYNEEKKLKVF 82
           KTV V    G   S L R++L         +     +  KL  I+ EL     E KL+ +
Sbjct: 251 KTVLVTGGGGSIGSELCRQILKFN---PKEIILFSRDEYKLYLIDMELREKFPELKLRFY 307

Query: 83  QADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETM---AAH----------- 128
             D  D   +  A++G                      +V+ +   AA            
Sbjct: 308 IGDVRDRDRVERAMEG---------------------HKVDIVFHAAALKHVPLVEYNPE 346

Query: 129 -----------NVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLC 177
                      NV EA  +   V K V  S+  AV       NPT            N+ 
Sbjct: 347 EAIKTNVLGTENVAEAAIKNG-VKKFVLISTDKAV-------NPT------------NV- 385

Query: 178 KKFKLWHGLSKTLAEKTAWALA 199
                  G +K LAEK   A  
Sbjct: 386 ------MGATKRLAEKLFQAAN 401

Length = 588

>gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein

 Score = 38.6 bits (91), Expect = 0.002
 Identities = 50/221 (22%), Positives = 69/221 (31%), Gaps = 85/221 (38%)

Query: 29  VCVMDASGHFASALVRRLLLRGYTVHAAL---HNHGKLQCIEEELINYNEEKKLKVFQAD 85
           V V    G   S L R++L         +    +  KL  I +EL     + KL+ F  D
Sbjct: 1   VLVTGGGGSIGSELCRQILKFN--PKKIILFSRDEFKLYEIRQELRQEYNDPKLRFFIGD 58

Query: 86  PFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETM---AAH-------------- 128
             D   L  A++                        V+T+   AA               
Sbjct: 59  VRDRERLERAME---------------------QHGVDTVFHAAALKHVPLVEYNPMEAI 97

Query: 129 --------NVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKF 180
                   NV EA  +   V+K V  S+  AV       NPT            N+    
Sbjct: 98  KTNVLGTENVAEAAIENG-VEKFVLISTDKAV-------NPT------------NV---- 133

Query: 181 KLWHGLSKTLAEKTAWALAMDRG-----ISMVSINGGLVMG 216
               G +K LAEK   A   + G      S+V    G V+G
Sbjct: 134 ---MGATKRLAEKLFQAANRESGSGKTRFSVV--RFGNVLG 169

This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	294
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	100.0
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
PLN02214	342	cinnamoyl-CoA reductase	100.0
PLN02583	297	cinnamoyl-CoA reductase	100.0
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
PLN02686	367	cinnamoyl-CoA reductase	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	100.0
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02650	351	dihydroflavonol-4-reductase	100.0
PLN02572	442	UDP-sulfoquinovose synthase	100.0
PLN00198	338	anthocyanidin reductase; Provisional	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	100.0
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	100.0
PLN02896	353	cinnamyl-alcohol dehydrogenase	100.0
PLN02695	370	GDP-D-mannose-3',5'-epimerase	100.0
PLN02166	436	dTDP-glucose 4,6-dehydratase	100.0
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	100.0
PLN02206	442	UDP-glucuronate decarboxylase	100.0
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	100.0
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	100.0
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	100.0
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	100.0
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	100.0
PLN02260	668	probable rhamnose biosynthetic enzyme	100.0
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	100.0
PLN02653	340	GDP-mannose 4,6-dehydratase	100.0
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	100.0
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	100.0
CHL00194	317	ycf39 Ycf39; Provisional	100.0
PLN02240	352	UDP-glucose 4-epimerase	100.0
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	100.0
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	100.0
PRK10675	338	UDP-galactose-4-epimerase; Provisional	100.0
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	100.0
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	100.0
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	100.0
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	100.0
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	100.0
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	100.0
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	100.0
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.98
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.98
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.97
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.97
PLN02996	491	fatty acyl-CoA reductase	99.97
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.97
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.97
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.97
PRK07201	657	short chain dehydrogenase; Provisional	99.97
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.97
PLN00016	378	RNA-binding protein; Provisional	99.97
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.96
PLN02778	298	3,5-epimerase/4-reductase	99.96
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.96
PRK06482	276	short chain dehydrogenase; Provisional	99.95
PRK05865	854	hypothetical protein; Provisional	99.95
PLN02503	605	fatty acyl-CoA reductase 2	99.94
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.94
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.94
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.94
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.94
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.93
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.93
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
PLN03209	576	translocon at the inner envelope of chloroplast su	99.93
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.93
PRK07806	248	short chain dehydrogenase; Provisional	99.93
PRK08263	275	short chain dehydrogenase; Provisional	99.93
PRK06180	277	short chain dehydrogenase; Provisional	99.93
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.93
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.93
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.92
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.92
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.92
PRK05875	276	short chain dehydrogenase; Provisional	99.92
PRK09135	249	pteridine reductase; Provisional	99.92
PRK06914	280	short chain dehydrogenase; Provisional	99.92
PRK12320	699	hypothetical protein; Provisional	99.92
PRK06182	273	short chain dehydrogenase; Validated	99.92
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.92
PRK06194	287	hypothetical protein; Provisional	99.92
PRK07775	274	short chain dehydrogenase; Provisional	99.92
PLN02260	668	probable rhamnose biosynthetic enzyme	99.92
PRK05876	275	short chain dehydrogenase; Provisional	99.91
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK12746	254	short chain dehydrogenase; Provisional	99.91
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK12829	264	short chain dehydrogenase; Provisional	99.91
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.91
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.91
PRK12828	239	short chain dehydrogenase; Provisional	99.91
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.91
PRK07060	245	short chain dehydrogenase; Provisional	99.91
PRK06138	252	short chain dehydrogenase; Provisional	99.91
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.91
PRK09186	256	flagellin modification protein A; Provisional	99.91
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK07774	250	short chain dehydrogenase; Provisional	99.91
PRK07067	257	sorbitol dehydrogenase; Provisional	99.9
PRK07074	257	short chain dehydrogenase; Provisional	99.9
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.9
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.9
PLN02253	280	xanthoxin dehydrogenase	99.9
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.9
PRK05717	255	oxidoreductase; Validated	99.9
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.9
PRK08219	227	short chain dehydrogenase; Provisional	99.9
PRK06179	270	short chain dehydrogenase; Provisional	99.9
PRK08628	258	short chain dehydrogenase; Provisional	99.9
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.9
PRK07454	241	short chain dehydrogenase; Provisional	99.9
PRK06181	263	short chain dehydrogenase; Provisional	99.9
PRK07890	258	short chain dehydrogenase; Provisional	99.9
PRK12827	249	short chain dehydrogenase; Provisional	99.9
PRK07024	257	short chain dehydrogenase; Provisional	99.9
PRK06128	300	oxidoreductase; Provisional	99.9
PRK09134	258	short chain dehydrogenase; Provisional	99.9
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.9
PRK12939	250	short chain dehydrogenase; Provisional	99.9
PRK05993	277	short chain dehydrogenase; Provisional	99.89
PRK10538	248	malonic semialdehyde reductase; Provisional	99.89
PRK07478	254	short chain dehydrogenase; Provisional	99.89
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.89
PRK06500	249	short chain dehydrogenase; Provisional	99.89
PRK05866	293	short chain dehydrogenase; Provisional	99.89
PRK06841	255	short chain dehydrogenase; Provisional	99.89
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.89
PRK06701	290	short chain dehydrogenase; Provisional	99.89
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK07063	260	short chain dehydrogenase; Provisional	99.89
PRK07326	237	short chain dehydrogenase; Provisional	99.89
PRK07814	263	short chain dehydrogenase; Provisional	99.89
PRK07825	273	short chain dehydrogenase; Provisional	99.89
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.89
PRK05693	274	short chain dehydrogenase; Provisional	99.89
PRK06101	240	short chain dehydrogenase; Provisional	99.89
PRK08265	261	short chain dehydrogenase; Provisional	99.89
PRK07102	243	short chain dehydrogenase; Provisional	99.89
PRK05650	270	short chain dehydrogenase; Provisional	99.89
PRK05867	253	short chain dehydrogenase; Provisional	99.88
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.88
PRK08643	256	acetoin reductase; Validated	99.88
PRK09291	257	short chain dehydrogenase; Provisional	99.88
PRK06197	306	short chain dehydrogenase; Provisional	99.88
PRK06139	330	short chain dehydrogenase; Provisional	99.88
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.88
PRK07985	294	oxidoreductase; Provisional	99.88
PRK08267	260	short chain dehydrogenase; Provisional	99.88
PRK07035	252	short chain dehydrogenase; Provisional	99.88
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.88
PRK08251	248	short chain dehydrogenase; Provisional	99.88
PRK07109	334	short chain dehydrogenase; Provisional	99.88
PRK06123	248	short chain dehydrogenase; Provisional	99.88
PRK06172	253	short chain dehydrogenase; Provisional	99.88
PRK06398	258	aldose dehydrogenase; Validated	99.88
PRK06949	258	short chain dehydrogenase; Provisional	99.88
PRK07856	252	short chain dehydrogenase; Provisional	99.88
PRK08226	263	short chain dehydrogenase; Provisional	99.88
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.87
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.87
PRK12747	252	short chain dehydrogenase; Provisional	99.87
PRK08017	256	oxidoreductase; Provisional	99.87
PRK08589	272	short chain dehydrogenase; Validated	99.87
PRK12742	237	oxidoreductase; Provisional	99.87
PRK08264	238	short chain dehydrogenase; Validated	99.87
PRK06196	315	oxidoreductase; Provisional	99.87
PRK06114	254	short chain dehydrogenase; Provisional	99.87
PRK12937	245	short chain dehydrogenase; Provisional	99.87
PRK07904	253	short chain dehydrogenase; Provisional	99.87
PRK09072	263	short chain dehydrogenase; Provisional	99.87
PRK08703	239	short chain dehydrogenase; Provisional	99.87
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.87
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.87
PRK12743	256	oxidoreductase; Provisional	99.87
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.87
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.87
PRK08278	273	short chain dehydrogenase; Provisional	99.87
KOG2774	366	consensus NAD dependent epimerase [General functio	99.87
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.87
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
PRK09242	257	tropinone reductase; Provisional	99.87
PRK12744	257	short chain dehydrogenase; Provisional	99.87
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
PRK08324	681	short chain dehydrogenase; Validated	99.86
PRK06057	255	short chain dehydrogenase; Provisional	99.86
PRK06198	260	short chain dehydrogenase; Provisional	99.86
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.86
PRK07577	234	short chain dehydrogenase; Provisional	99.86
PRK07069	251	short chain dehydrogenase; Validated	99.86
PRK07576	264	short chain dehydrogenase; Provisional	99.86
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK05872	296	short chain dehydrogenase; Provisional	99.86
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.86
PRK06523	260	short chain dehydrogenase; Provisional	99.86
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.86
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.86
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.86
PRK08339	263	short chain dehydrogenase; Provisional	99.86
PRK07041	230	short chain dehydrogenase; Provisional	99.86
PRK06483	236	dihydromonapterin reductase; Provisional	99.85
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
PRK05854	313	short chain dehydrogenase; Provisional	99.85
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.85
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.85
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.85
PRK07831	262	short chain dehydrogenase; Provisional	99.85
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.85
PRK07791	286	short chain dehydrogenase; Provisional	99.85
PRK06924	251	short chain dehydrogenase; Provisional	99.84
PRK07677	252	short chain dehydrogenase; Provisional	99.84
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.84
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.84
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.84
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.84
PRK07832	272	short chain dehydrogenase; Provisional	99.84
PRK06953	222	short chain dehydrogenase; Provisional	99.83
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.83
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.83
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.83
PRK06484	520	short chain dehydrogenase; Validated	99.83
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.83
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.83
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.83
PRK05884	223	short chain dehydrogenase; Provisional	99.83
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.83
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.83
PRK06940	275	short chain dehydrogenase; Provisional	99.83
PRK07201	657	short chain dehydrogenase; Provisional	99.83
COG2910	211	Putative NADH-flavin reductase [General function p	99.83
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.83
PLN02780	320	ketoreductase/ oxidoreductase	99.82
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.82
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.82
PRK07023	243	short chain dehydrogenase; Provisional	99.82
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.82
PRK06125	259	short chain dehydrogenase; Provisional	99.82
PRK07062	265	short chain dehydrogenase; Provisional	99.82
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.82
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.82
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.82
PRK05855	582	short chain dehydrogenase; Validated	99.82
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.82
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.82
PRK07578	199	short chain dehydrogenase; Provisional	99.81
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.81
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.81
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.81
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.81
PRK05599	246	hypothetical protein; Provisional	99.81
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.8
PRK08177	225	short chain dehydrogenase; Provisional	99.8
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.8
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.8
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.79
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.79
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.79
PRK12367	245	short chain dehydrogenase; Provisional	99.78
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.78
PRK06484	520	short chain dehydrogenase; Validated	99.77
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.76
PRK08303	305	short chain dehydrogenase; Provisional	99.75
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.75
PLN00015	308	protochlorophyllide reductase	99.74
PRK08862	227	short chain dehydrogenase; Provisional	99.74
KOG0725	270	consensus Reductases with broad range of substrate	99.73
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.71
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.69
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.68
KOG1208	314	consensus Dehydrogenases with different specificit	99.68
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.67
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.67
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.66
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.66
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.64
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.64
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.64
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.63
COG1028	251	FabG Dehydrogenases with different specificities (	99.62
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.62
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.6
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.6
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.59
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.57
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.53
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.53
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.47
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.45
PTZ00325	321	malate dehydrogenase; Provisional	99.42
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.37
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.31
PLN00106	323	malate dehydrogenase	99.3
PRK06720	169	hypothetical protein; Provisional	99.3
PRK08309	177	short chain dehydrogenase; Provisional	99.25
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.12
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	99.07
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	99.01
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.91
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	98.9
PRK05086	312	malate dehydrogenase; Provisional	98.86
PRK09620	229	hypothetical protein; Provisional	98.79
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.75
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.73
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.72
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.71
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.71
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	98.69
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	98.62
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.55
PRK14982	340	acyl-ACP reductase; Provisional	98.48
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	98.38
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.37
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	98.36
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.34
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.31
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	98.26
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	98.25
COG0569	225	TrkA K+ transport systems, NAD-binding component [	98.21
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	98.21
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	98.18
COG3268	382	Uncharacterized conserved protein [Function unknow	98.15
PRK05442	326	malate dehydrogenase; Provisional	98.12
PLN00112	444	malate dehydrogenase (NADP); Provisional	98.12
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	98.11
PRK06223	307	malate dehydrogenase; Reviewed	98.09
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.07
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	98.01
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	98.01
PTZ00117	319	malate dehydrogenase; Provisional	98.01
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	98.0
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	97.99
PTZ00082	321	L-lactate dehydrogenase; Provisional	97.99
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.99
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.98
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	97.97
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.96
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	97.95
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.94
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.94
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	97.93
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.93
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.91
PRK09496	453	trkA potassium transporter peripheral membrane com	97.9
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	97.9
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	97.9
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.89
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.86
PLN02602	350	lactate dehydrogenase	97.86
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.82
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.79
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	97.78
PRK09496	453	trkA potassium transporter peripheral membrane com	97.76
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	97.73
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	97.73
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	97.72
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.71
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	97.71
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	97.7
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.69
PRK04148	134	hypothetical protein; Provisional	97.69
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.64
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	97.6
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	97.59
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.58
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	97.58
PRK10669	558	putative cation:proton antiport protein; Provision	97.58
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	97.55
KOG1496	332	consensus Malate dehydrogenase [Energy production	97.54
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	97.52
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.52
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.49
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	97.49
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	97.48
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	97.46
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.46
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	97.45
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	97.44
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	97.44
PRK00048	257	dihydrodipicolinate reductase; Provisional	97.44
PLN02383	344	aspartate semialdehyde dehydrogenase	97.43
COG4982	866	3-oxoacyl-[acyl-carrier protein]	97.42
PRK03659	601	glutathione-regulated potassium-efflux system prot	97.42
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	97.41
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.41
PRK08328	231	hypothetical protein; Provisional	97.4
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	97.39
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	97.37
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.35
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	97.34
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.34
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.33
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.32
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	97.32
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.31
PRK08655	437	prephenate dehydrogenase; Provisional	97.31
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	97.29
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	97.28
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	97.27
PLN02353	473	probable UDP-glucose 6-dehydrogenase	97.26
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.26
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	97.26
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	97.25
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	97.23
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	97.23
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	97.23
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.22
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.21
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	97.2
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	97.19
PRK08223	287	hypothetical protein; Validated	97.17
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.15
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	97.15
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	97.15
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	97.15
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.14
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	97.13
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	97.1
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.09
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.09
PRK03562	621	glutathione-regulated potassium-efflux system prot	97.09
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	97.06
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	97.06
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	97.05
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.05
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	97.05
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.05
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	97.04
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.04
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.04
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	97.03
TIGR01019	286	sucCoAalpha succinyl-CoA synthetase, alpha subunit	97.02
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	97.0
PRK07574	385	formate dehydrogenase; Provisional	97.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.0
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	97.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.0
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	96.99
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	96.98
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	96.98
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.95
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	96.92
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.91
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	96.91
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	96.9
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.89
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	96.89
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	96.89
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.88
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.86
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.86
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.86
PRK06849	389	hypothetical protein; Provisional	96.84
COG2099	257	CobK Precorrin-6x reductase [Coenzyme metabolism]	96.84
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.83
TIGR02717	447	AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP	96.82
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	96.81
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	96.81
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.81
PLN03139	386	formate dehydrogenase; Provisional	96.8
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.79
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.79
PRK13243	333	glyoxylate reductase; Reviewed	96.78
PLN00203	519	glutamyl-tRNA reductase	96.77
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	96.77
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.75
KOG0172	445	consensus Lysine-ketoglutarate reductase/saccharop	96.75
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.74
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	96.74
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.74
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.74
PRK07877	722	hypothetical protein; Provisional	96.73
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	96.73
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.72
PLN02928	347	oxidoreductase family protein	96.71
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.71
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.7
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	96.7
PRK12480	330	D-lactate dehydrogenase; Provisional	96.7
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.68
TIGR01142	380	purT phosphoribosylglycinamide formyltransferase 2	96.68
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	96.67
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.67
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.67
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	96.64
PRK07411	390	hypothetical protein; Validated	96.64
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.63
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.63
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	96.63
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	96.62
PRK07417	279	arogenate dehydrogenase; Reviewed	96.62
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.61
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	96.61
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	96.58
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	96.57
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.57

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=100.00  E-value=1.3e-45  Score=306.32  Aligned_cols=261  Identities=38%  Similarity=0.583  Sum_probs=226.8

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhh---HHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQC---IEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~  101 (294)
                      .+++|+|||||||||+||++.|+++||.|++++|++++.+.   +.+   +....+++..+.+|++|++++.+++++||+
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~---l~~a~~~l~l~~aDL~d~~sf~~ai~gcdg   81 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRK---LEGAKERLKLFKADLLDEGSFDKAIDGCDG   81 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHh---cccCcccceEEeccccccchHHHHHhCCCE
Confidence            57899999999999999999999999999999999887544   444   666667799999999999999999999999


Q ss_pred             EEecCCCCCCCCcchh-hhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhc
Q 043792          102 LFYSFEPPSDHSTYDE-LTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKF  180 (294)
Q Consensus       102 Vih~a~~~~~~~~~~~-~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~  180 (294)
                      |||+|++......+++ ++.+..+.|+.|++++|++.+.++|||++||++++.+.... ......++|+.|.+...+...
T Consensus        82 VfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~-~~~~~vvdE~~wsd~~~~~~~  160 (327)
T KOG1502|consen   82 VFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPN-IGENSVVDEESWSDLDFCRCK  160 (327)
T ss_pred             EEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcC-CCCCcccccccCCcHHHHHhh
Confidence            9999999887655444 89999999999999999999569999999999987765222 233558999999999988777


Q ss_pred             cchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc--------cccccccccCCCccccccHHHHHHHHHh
Q 043792          181 KLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP--------YLKGAAEMYEDGVMASVDLRFYVDAHIC  252 (294)
Q Consensus       181 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~--------~~~~~~~~~~~~~~~~v~v~D~a~~i~~  252 (294)
                      ...|..+|..+|+.++.++++.+++.+++.|+.|+||.....-.        +++|....+.+..+.||||+|+|.+++.
T Consensus       161 ~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AHv~  240 (327)
T KOG1502|consen  161 KLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDVALAHVL  240 (327)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHHHHHHHHH
Confidence            78999999999999999999999999999999999999765211        6677777777777779999999999999


Q ss_pred             hhcCcCCCCeEEeecccccHHHHHHHHHHHhCCCCCCC
Q 043792          253 VFEDVSSYGRYLCFNHVINCNEDAMKLARMLLPPSDTS  290 (294)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~  290 (294)
                      +++++...|+|++.++..++.|+++.+.+ ..|...++
T Consensus       241 a~E~~~a~GRyic~~~~~~~~ei~~~l~~-~~P~~~ip  277 (327)
T KOG1502|consen  241 ALEKPSAKGRYICVGEVVSIKEIADILRE-LFPDYPIP  277 (327)
T ss_pred             HHcCcccCceEEEecCcccHHHHHHHHHH-hCCCCCCC
Confidence            99999999999999998889999999977 55555443

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=4.2e-40  Score=266.30  Aligned_cols=243  Identities=16%  Similarity=0.096  Sum_probs=197.8

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC-ChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCCEEE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG-KLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCSGLF  103 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~Vi  103 (294)
                      |+||||||+||||||.|.+|++.|++|++++.-.. ..+.+..   .     ..+++++|+.|.+.+.+.|+  ++|+||
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~---~-----~~~f~~gDi~D~~~L~~vf~~~~idaVi   72 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLK---L-----QFKFYEGDLLDRALLTAVFEENKIDAVV   72 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhh---c-----cCceEEeccccHHHHHHHHHhcCCCEEE
Confidence            68999999999999999999999999999988443 3333332   1     26899999999999999997  589999


Q ss_pred             ecCCCCCCCCcc--hhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhcc
Q 043792          104 YSFEPPSDHSTY--DELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFK  181 (294)
Q Consensus       104 h~a~~~~~~~~~--~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  181 (294)
                      |+|+......+-  +-+.++.|+.||.+|+++|++. ++++|||-||.+  +||...    ..|++|+.+..|.      
T Consensus        73 HFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~-gv~~~vFSStAa--vYG~p~----~~PI~E~~~~~p~------  139 (329)
T COG1087          73 HFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQT-GVKKFIFSSTAA--VYGEPT----TSPISETSPLAPI------  139 (329)
T ss_pred             ECccccccchhhhCHHHHHhhchHhHHHHHHHHHHh-CCCEEEEecchh--hcCCCC----CcccCCCCCCCCC------
Confidence            999986655443  4499999999999999999999 999999988875  778766    7799999999988      


Q ss_pred             chhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCC--Cc-------------cccccc---cccC--------C
Q 043792          182 LWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTIS--NP-------------YLKGAA---EMYE--------D  235 (294)
Q Consensus       182 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~--~~-------------~~~~~~---~~~~--------~  235 (294)
                      ++||+||++.|++++.+++.++++++++|.+|+.|.+....  ..             ..-|+.   .+++        .
T Consensus       140 NPYG~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT  219 (329)
T COG1087         140 NPYGRSKLMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGT  219 (329)
T ss_pred             CcchhHHHHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCC
Confidence            99999999999999999999999999999999999875421  11             001111   2332        2


Q ss_pred             CccccccHHHHHHHHHhhhcCcCCCC---eEEee-cccccHHHHHHHHHHHhCCCCCCC
Q 043792          236 GVMASVDLRFYVDAHICVFEDVSSYG---RYLCF-NHVINCNEDAMKLARMLLPPSDTS  290 (294)
Q Consensus       236 ~~~~~v~v~D~a~~i~~~~~~~~~~~---~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~  290 (294)
                      +...+|||.|+|++.+.+++.-..+|   .|+++ +..+|..|+++.+.++.|.+++..
T Consensus       220 ~iRDYIHV~DLA~aH~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip~~  278 (329)
T COG1087         220 CIRDYIHVDDLADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPVE  278 (329)
T ss_pred             eeeeeeehhHHHHHHHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcCcee
Confidence            33449999999999999987533233   37665 556999999999999999887754

>PLN02214 cinnamoyl-CoA reductase

Probab=100.00  E-value=1.3e-38  Score=277.06  Aligned_cols=252  Identities=36%  Similarity=0.539  Sum_probs=196.3

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhh--HHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQC--IEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~  101 (294)
                      .++|+||||||+||||++|++.|+++|++|++++|+.+....  +..   ......++.++.+|++|.+.+.++++++|+
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   84 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRE---LEGGKERLILCKADLQDYEALKAAIDGCDG   84 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHH---hhCCCCcEEEEecCcCChHHHHHHHhcCCE
Confidence            356899999999999999999999999999999997654221  111   211223688999999999999999999999


Q ss_pred             EEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhcc
Q 043792          102 LFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFK  181 (294)
Q Consensus       102 Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  181 (294)
                      |||+|+...   ......+++|+.++.+++++|++. +++||||+||.++ +|+.....+ ..+++|+.+........+.
T Consensus        85 Vih~A~~~~---~~~~~~~~~nv~gt~~ll~aa~~~-~v~r~V~~SS~~a-vyg~~~~~~-~~~~~E~~~~~~~~~~~p~  158 (342)
T PLN02214         85 VFHTASPVT---DDPEQMVEPAVNGAKFVINAAAEA-KVKRVVITSSIGA-VYMDPNRDP-EAVVDESCWSDLDFCKNTK  158 (342)
T ss_pred             EEEecCCCC---CCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEecccee-eeccCCCCC-CcccCcccCCChhhccccc
Confidence            999999753   234578999999999999999998 8999999999753 454322011 2357888654333222334


Q ss_pred             chhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc--------cccccccccCCCccccccHHHHHHHHHhh
Q 043792          182 LWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP--------YLKGAAEMYEDGVMASVDLRFYVDAHICV  253 (294)
Q Consensus       182 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~--------~~~~~~~~~~~~~~~~v~v~D~a~~i~~~  253 (294)
                      +.|+.+|.++|++++.++++++++++++||++||||.......        ++.+....+++....|||++|+|++++.+
T Consensus       159 ~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~~~a  238 (342)
T PLN02214        159 NWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLV  238 (342)
T ss_pred             cHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHHHHHHHH
Confidence            7899999999999999998889999999999999998542211        22344444455556699999999999999


Q ss_pred             hcCcCCCCeEEeecccccHHHHHHHHHHHhC
Q 043792          254 FEDVSSYGRYLCFNHVINCNEDAMKLARMLL  284 (294)
Q Consensus       254 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  284 (294)
                      ++.+..+++|+++++.++++|+++.+.+.++
T Consensus       239 l~~~~~~g~yn~~~~~~~~~el~~~i~~~~~  269 (342)
T PLN02214        239 YEAPSASGRYLLAESARHRGEVVEILAKLFP  269 (342)
T ss_pred             HhCcccCCcEEEecCCCCHHHHHHHHHHHCC
Confidence            9877666789887778999999999999875

>PLN02583 cinnamoyl-CoA reductase

Probab=100.00  E-value=2e-38  Score=270.86  Aligned_cols=262  Identities=61%  Similarity=1.023  Sum_probs=199.4

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChh--hHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQ--CIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      .+++||||||+||||++++++|+++|++|++++|+.+...  .....  ......+++++.+|++|.+.+.+++.++|.|
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~--l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v   82 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRG--LSCEEERLKVFDVDPLDYHSILDALKGCSGL   82 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHh--cccCCCceEEEEecCCCHHHHHHHHcCCCEE
Confidence            4679999999999999999999999999999998643322  11111  2112346889999999999999999999999


Q ss_pred             EecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccc
Q 043792          103 FYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL  182 (294)
Q Consensus       103 ih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  182 (294)
                      +|+++.........+.++++|+.++.++++++.+..+++|||++||.+++.++... .+...+++|+.+..+........
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~-~~~~~~~~E~~~~~~~~~~~~~~  161 (297)
T PLN02583         83 FCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDN-ISTQKDVDERSWSDQNFCRKFKL  161 (297)
T ss_pred             EEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheeccccc-CCCCCCCCcccCCCHHHHhhccc
Confidence            99876654332334578999999999999999886357899999998766554211 11134688888765554333335


Q ss_pred             hhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHHHHHHHHhhhcCcCCCCe
Q 043792          183 WHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVSSYGR  262 (294)
Q Consensus       183 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~i~~~~~~~~~~~~  262 (294)
                      .|+.||..+|++++.++++.+++++++||++||||.......++.+....++++.+.||||+|+|++++.+++.+...++
T Consensus       162 ~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~v~V~Dva~a~~~al~~~~~~~r  241 (297)
T PLN02583        162 WHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNPYLKGAAQMYENGVLVTVDVNFLVDAHIRAFEDVSSYGR  241 (297)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchhhhcCCcccCcccCcceEEHHHHHHHHHHHhcCcccCCc
Confidence            79999999999999998888999999999999999864333344554455566667799999999999999998777778


Q ss_pred             EEeecccccH-HHHHHHHHHHhCCCCCCC
Q 043792          263 YLCFNHVINC-NEDAMKLARMLLPPSDTS  290 (294)
Q Consensus       263 ~~~~~~~~s~-~~~~~~~~~~~~~~~~~~  290 (294)
                      |++.++..++ .++++.+.+ +.|..+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~-~~p~~~~~  269 (297)
T PLN02583        242 YLCFNHIVNTEEDAVKLAQM-LSPLIPSP  269 (297)
T ss_pred             EEEecCCCccHHHHHHHHHH-hCCCCCCC
Confidence            9998887665 556666655 55566554

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=1.5e-38  Score=275.02  Aligned_cols=258  Identities=33%  Similarity=0.485  Sum_probs=199.2

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      .+++||||||+||||++++++|+++|++|+++.|+....+.+...+.......+++++.+|++|++.+.++++++|+|||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   83 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH   83 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence            35899999999999999999999999999999998765544333110111234689999999999999999999999999


Q ss_pred             cCCCCCCCCcch-hhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccch
Q 043792          105 SFEPPSDHSTYD-ELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLW  183 (294)
Q Consensus       105 ~a~~~~~~~~~~-~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  183 (294)
                      +|+.......++ ...+++|+.++.++++++++..+++|||++||.+++.|+.....+ ..+++|+.+..+..+..+.+.
T Consensus        84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~-~~~~~E~~~~~p~~~~~~~~~  162 (322)
T PLN02986         84 TASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEA-NDVVDETFFSDPSLCRETKNW  162 (322)
T ss_pred             eCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCC-CCCcCcccCCChHHhhccccc
Confidence            999754332222 257899999999999999875368999999998766555432111 336888887665433333478


Q ss_pred             hHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc--------cccccccccCCCccccccHHHHHHHHHhhhc
Q 043792          184 HGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP--------YLKGAAEMYEDGVMASVDLRFYVDAHICVFE  255 (294)
Q Consensus       184 Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~--------~~~~~~~~~~~~~~~~v~v~D~a~~i~~~~~  255 (294)
                      |+.+|.++|.+++.|.++++++++++||+++|||.......        +..+.. .+++....|||++|+|++++.+++
T Consensus       163 Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~v~v~Dva~a~~~al~  241 (322)
T PLN02986        163 YPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKN-LFNNRFYRFVDVRDVALAHIKALE  241 (322)
T ss_pred             hHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCC-CCCCcCcceeEHHHHHHHHHHHhc
Confidence            99999999999999998889999999999999997542211        223332 233333459999999999999998


Q ss_pred             CcCCCCeEEeecccccHHHHHHHHHHHhC
Q 043792          256 DVSSYGRYLCFNHVINCNEDAMKLARMLL  284 (294)
Q Consensus       256 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  284 (294)
                      ++..+++|++.++.+++.|+++.+.+.++
T Consensus       242 ~~~~~~~yni~~~~~s~~e~~~~i~~~~~  270 (322)
T PLN02986        242 TPSANGRYIIDGPIMSVNDIIDILRELFP  270 (322)
T ss_pred             CcccCCcEEEecCCCCHHHHHHHHHHHCC
Confidence            87666689888788999999999999875

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=1.8e-38  Score=274.65  Aligned_cols=257  Identities=35%  Similarity=0.509  Sum_probs=196.5

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEec
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYS  105 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~  105 (294)
                      +++||||||+||||++++++|+++|++|++++|+..................+++++.+|+.|++.+.++++++|+|||+
T Consensus         4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~   83 (322)
T PLN02662          4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFHT   83 (322)
T ss_pred             CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEEe
Confidence            58999999999999999999999999999999986543322220001111347899999999999999999999999999


Q ss_pred             CCCCCCCCcch-hhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchh
Q 043792          106 FEPPSDHSTYD-ELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWH  184 (294)
Q Consensus       106 a~~~~~~~~~~-~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y  184 (294)
                      |+........+ ...+++|+.++.++++++.+..+++|||++||.++++|+.....+ ..+++|+.+..+.......+.|
T Consensus        84 A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~-~~~~~E~~~~~p~~~~~~~~~Y  162 (322)
T PLN02662         84 ASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTP-DVVVDETWFSDPAFCEESKLWY  162 (322)
T ss_pred             CCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCC-CCcCCcccCCChhHhhcccchH
Confidence            98765433333 268899999999999998876467899999998755564322011 2367887766554322223689


Q ss_pred             HhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc--------cccccccccCCCccccccHHHHHHHHHhhhcC
Q 043792          185 GLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP--------YLKGAAEMYEDGVMASVDLRFYVDAHICVFED  256 (294)
Q Consensus       185 ~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~--------~~~~~~~~~~~~~~~~v~v~D~a~~i~~~~~~  256 (294)
                      +.+|.++|++++.+..+++++++++||+++|||.......        ++.+.. .+++....|+|++|+|++++.+++.
T Consensus       163 ~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~a~~~~~~~  241 (322)
T PLN02662        163 VLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQ-TFPNASYRWVDVRDVANAHIQAFEI  241 (322)
T ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCc-cCCCCCcCeEEHHHHHHHHHHHhcC
Confidence            9999999999999988889999999999999997532211        222322 3344556699999999999999987


Q ss_pred             cCCCCeEEeecccccHHHHHHHHHHHhC
Q 043792          257 VSSYGRYLCFNHVINCNEDAMKLARMLL  284 (294)
Q Consensus       257 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~  284 (294)
                      +...+.|++.++.++++|+++.+.+.++
T Consensus       242 ~~~~~~~~~~g~~~s~~e~~~~i~~~~~  269 (322)
T PLN02662        242 PSASGRYCLVERVVHYSEVVKILHELYP  269 (322)
T ss_pred             cCcCCcEEEeCCCCCHHHHHHHHHHHCC
Confidence            6656678777888999999999999765

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=1.4e-38  Score=277.62  Aligned_cols=247  Identities=15%  Similarity=0.067  Sum_probs=190.8

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChh-hHHHHHhh--ccCCCCeEEEECCCCChhHHHHHhccCCE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQ-CIEEELIN--YNEEKKLKVFQADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~l~~~~~~--~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~  101 (294)
                      ++|+|||||||||||++|+++|+++|++|++++|...... .+......  .....++.++.+|+.|.+.+.++++++|+
T Consensus        14 ~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d~   93 (348)
T PRK15181         14 APKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDY   93 (348)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCCE
Confidence            4689999999999999999999999999999998654322 12110000  00113688999999999999999999999


Q ss_pred             EEecCCCCCCCC--cchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhh
Q 043792          102 LFYSFEPPSDHS--TYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKK  179 (294)
Q Consensus       102 Vih~a~~~~~~~--~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~  179 (294)
                      |||+|+......  .++...+++|+.++.+++++|++. ++++|||+||++  +|+...    ..+..|+++..|.    
T Consensus        94 ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~v~~SS~~--vyg~~~----~~~~~e~~~~~p~----  162 (348)
T PRK15181         94 VLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDA-HVSSFTYAASSS--TYGDHP----DLPKIEERIGRPL----  162 (348)
T ss_pred             EEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeechH--hhCCCC----CCCCCCCCCCCCC----
Confidence            999998754322  233467999999999999999999 999999999985  555433    3356676665555    


Q ss_pred             ccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCC---c--------cccccc-cccCCCcc--ccccHHH
Q 043792          180 FKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISN---P--------YLKGAA-EMYEDGVM--ASVDLRF  245 (294)
Q Consensus       180 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~---~--------~~~~~~-~~~~~~~~--~~v~v~D  245 (294)
                        ++|+.+|.++|++++.|.++++++++++||+++|||+.....   .        +..+.+ .+++++.+  .|+|++|
T Consensus       163 --~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D  240 (348)
T PRK15181        163 --SPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN  240 (348)
T ss_pred             --ChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHH
Confidence              789999999999999998888999999999999999754321   1        334444 45666654  4999999


Q ss_pred             HHHHHHhhhcCcC---CCCeEEee-cccccHHHHHHHHHHHhC
Q 043792          246 YVDAHICVFEDVS---SYGRYLCF-NHVINCNEDAMKLARMLL  284 (294)
Q Consensus       246 ~a~~i~~~~~~~~---~~~~~~~~-~~~~s~~~~~~~~~~~~~  284 (294)
                      +|+++++++....   .++.|+++ ++++|++|+++.+.+.++
T Consensus       241 ~a~a~~~~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~  283 (348)
T PRK15181        241 VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLN  283 (348)
T ss_pred             HHHHHHHHHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhC
Confidence            9999998775432   23468775 567999999999998886

>PLN02686 cinnamoyl-CoA reductase

Probab=100.00  E-value=7.7e-38  Score=274.29  Aligned_cols=265  Identities=36%  Similarity=0.631  Sum_probs=200.3

Q ss_pred             CCCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhcc------CCCCeEEEECCCCChhHHHHH
Q 043792           22 SSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYN------EEKKLKVFQADPFDYHSLVNA   95 (294)
Q Consensus        22 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~------~~~~v~~~~~Dl~~~~~~~~~   95 (294)
                      ...++|+||||||+||||+++++.|+++|++|++++|+.+..+.+..   ...      ...++.++.+|++|.+.+.++
T Consensus        49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~---l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~  125 (367)
T PLN02686         49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLRE---MEMFGEMGRSNDGIWTVMANLTEPESLHEA  125 (367)
T ss_pred             cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HhhhccccccCCceEEEEcCCCCHHHHHHH
Confidence            35668899999999999999999999999999998887654444332   110      013578999999999999999


Q ss_pred             hccCCEEEecCCCCCCCC--cchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCC
Q 043792           96 LKGCSGLFYSFEPPSDHS--TYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSD  173 (294)
Q Consensus        96 ~~~~d~Vih~a~~~~~~~--~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~  173 (294)
                      ++++|.|||+++......  .......+.|+.++.+++++|++..+++||||+||..+.+|+..........++|+.+..
T Consensus       126 i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~  205 (367)
T PLN02686        126 FDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSD  205 (367)
T ss_pred             HHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCC
Confidence            999999999988754332  122356788999999999999875469999999997545665321000012466765443


Q ss_pred             hhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-----cccccccccCCCccccccHHHHHH
Q 043792          174 VNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-----YLKGAAEMYEDGVMASVDLRFYVD  248 (294)
Q Consensus       174 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-----~~~~~~~~~~~~~~~~v~v~D~a~  248 (294)
                      ...+..+.++|+.+|.++|++++.++.+++++++++||++||||+......     ++.+...+++++.+.|+||+|+|+
T Consensus       206 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~~~~~g~g~~~~v~V~Dva~  285 (367)
T PLN02686        206 ESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIAYLKGAQEMLADGLLATADVERLAE  285 (367)
T ss_pred             hhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHHHHhcCCCccCCCCCcCeEEHHHHHH
Confidence            332333347899999999999999988889999999999999998532211     334444566777777999999999


Q ss_pred             HHHhhhcCc---CCCCeEEeecccccHHHHHHHHHHHhCCCCCC
Q 043792          249 AHICVFEDV---SSYGRYLCFNHVINCNEDAMKLARMLLPPSDT  289 (294)
Q Consensus       249 ~i~~~~~~~---~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~  289 (294)
                      +++.+++..   ..++.|+.+++.++++|+++.+.+.+|.+...
T Consensus       286 A~~~al~~~~~~~~~~~yi~~g~~~s~~e~~~~i~~~~g~~~~~  329 (367)
T PLN02686        286 AHVCVYEAMGNKTAFGRYICFDHVVSREDEAEELARQIGLPINK  329 (367)
T ss_pred             HHHHHHhccCCCCCCCcEEEeCCCccHHHHHHHHHHHcCCCCCc
Confidence            999999742   33456877788899999999999999865443

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=6.5e-38  Score=252.41  Aligned_cols=247  Identities=15%  Similarity=0.064  Sum_probs=207.4

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCC--CChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRG--YTVHAALHNH--GKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCS  100 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~--~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d  100 (294)
                      |++|||||.||||++++++++++.  ++|+.++.-.  ...+.+..    ....+++.++++|+.|.+.+.++++  ++|
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~----~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D   76 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLAD----VEDSPRYRFVQGDICDRELVDRLFKEYQPD   76 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHh----hhcCCCceEEeccccCHHHHHHHHHhcCCC
Confidence            689999999999999999999985  4567776632  23344433    2345689999999999999999998  589


Q ss_pred             EEEecCCCCCCCCcc--hhhhHhHhhHHHHHHHHHHHhcCCC-cEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhh
Q 043792          101 GLFYSFEPPSDHSTY--DELTAEVETMAAHNVLEACAQTNTV-DKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLC  177 (294)
Q Consensus       101 ~Vih~a~~~~~~~~~--~~~~~~~n~~~~~~ll~~~~~~~~~-~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~  177 (294)
                      +|+|+|+-.+...+-  +...+++|+.||.+||+++++. .. .||+|+||.  .+||+..  .+...++|.++..|.  
T Consensus        77 ~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~-~~~frf~HISTD--EVYG~l~--~~~~~FtE~tp~~Ps--  149 (340)
T COG1088          77 AVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKY-WGKFRFHHISTD--EVYGDLG--LDDDAFTETTPYNPS--  149 (340)
T ss_pred             eEEEechhccccccccChhhhhhcchHHHHHHHHHHHHh-cccceEEEeccc--ccccccc--CCCCCcccCCCCCCC--
Confidence            999999987765543  4588999999999999999999 43 499999999  4777765  112268999999999  


Q ss_pred             hhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-------cccccc-cccCCCccc--cccHHHHH
Q 043792          178 KKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-------YLKGAA-EMYEDGVMA--SVDLRFYV  247 (294)
Q Consensus       178 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-------~~~~~~-~~~~~~~~~--~v~v~D~a  247 (294)
                          ++|++||..++.++++|...+|++++|.|+++-|||.+.....       .+.|++ +++++|.+-  |+||+|-|
T Consensus       150 ----SPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~  225 (340)
T COG1088         150 ----SPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHC  225 (340)
T ss_pred             ----CCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHH
Confidence                9999999999999999999999999999999999999765442       556776 899998876  99999999


Q ss_pred             HHHHhhhcCcCCCCeEEeec-ccccHHHHHHHHHHHhCCCCC
Q 043792          248 DAHICVFEDVSSYGRYLCFN-HVINCNEDAMKLARMLLPPSD  288 (294)
Q Consensus       248 ~~i~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~  288 (294)
                      +|+..+++++..+..|++++ ...+-.|+++.+++.++.+.+
T Consensus       226 ~ai~~Vl~kg~~GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~  267 (340)
T COG1088         226 RAIDLVLTKGKIGETYNIGGGNERTNLEVVKTICELLGKDKP  267 (340)
T ss_pred             HHHHHHHhcCcCCceEEeCCCccchHHHHHHHHHHHhCcccc
Confidence            99999999988866798865 468999999999999998765

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=100.00  E-value=1.1e-37  Score=262.36  Aligned_cols=253  Identities=24%  Similarity=0.207  Sum_probs=188.1

Q ss_pred             EEeCCCchHHHHHHHHHHHCC--CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEecCC
Q 043792           30 CVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSFE  107 (294)
Q Consensus        30 lItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~a~  107 (294)
                      |||||+||||++|+++|+++|  ++|+++++.+...... .   . ......+++.+|++|.+++.++++++|+|||+|+
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~-~---~-~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa   75 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLK-D---L-QKSGVKEYIQGDITDPESLEEALEGVDVVFHTAA   75 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccch-h---h-hcccceeEEEeccccHHHHHHHhcCCceEEEeCc
Confidence            699999999999999999999  8999999876543211 1   0 1112344999999999999999999999999999


Q ss_pred             CCCCCC-cchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHh
Q 043792          108 PPSDHS-TYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGL  186 (294)
Q Consensus       108 ~~~~~~-~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~  186 (294)
                      +..... ...+.++++|+.||+|++++|++. +++||||+||.+++...... .+ ....+|+.+....    +...|+.
T Consensus        76 ~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~-~VkrlVytSS~~vv~~~~~~-~~-~~~~dE~~~~~~~----~~~~Y~~  148 (280)
T PF01073_consen   76 PVPPWGDYPPEEYYKVNVDGTRNVLEAARKA-GVKRLVYTSSISVVFDNYKG-DP-IINGDEDTPYPSS----PLDPYAE  148 (280)
T ss_pred             cccccCcccHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcCcceeEeccCC-CC-cccCCcCCccccc----ccCchHH
Confidence            866554 445589999999999999999999 99999999999876542222 01 1123455443221    3378999


Q ss_pred             hHHHHHHHHHHHHH---hc--CCeEEEEecCceeCCCCCCCCc-----cccccc-cccCCC--ccccccHHHHHHHHHhh
Q 043792          187 SKTLAEKTAWALAM---DR--GISMVSINGGLVMGPDVTISNP-----YLKGAA-EMYEDG--VMASVDLRFYVDAHICV  253 (294)
Q Consensus       187 sK~~~e~~~~~~~~---~~--~~~~~ilrp~~i~G~~~~~~~~-----~~~~~~-~~~~~~--~~~~v~v~D~a~~i~~~  253 (294)
                      ||..+|++++.+..   +.  .+.+++|||+.||||++.....     ...|.. ...+++  .+.|+||+|+|++++.+
T Consensus       149 SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA  228 (280)
T PF01073_consen  149 SKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLA  228 (280)
T ss_pred             HHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHH
Confidence            99999999999765   22  4999999999999999654332     222322 333433  35599999999999887


Q ss_pred             hcC-------cCCCCe-EEeec-cccc-HHHHHHHHHHHhCCCCCC-CCCCC
Q 043792          254 FED-------VSSYGR-YLCFN-HVIN-CNEDAMKLARMLLPPSDT-STPPL  294 (294)
Q Consensus       254 ~~~-------~~~~~~-~~~~~-~~~s-~~~~~~~~~~~~~~~~~~-~~~p~  294 (294)
                      ++.       ....|+ |++.+ +++. ++++++.+.+.+|.+.+. ...||
T Consensus       229 ~~~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~~~~lp~  280 (280)
T PF01073_consen  229 AQALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPPKSISLPL  280 (280)
T ss_pred             HHHhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCCcccCCCC
Confidence            642       233554 77664 6677 999999999999987654 55554

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=1.7e-36  Score=262.52  Aligned_cols=258  Identities=30%  Similarity=0.440  Sum_probs=194.9

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      .+|+||||||+||||+++++.|+++|++|++++|+..........+.......+++++.+|++|.+.+.++++++|+|||
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   83 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFH   83 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEE
Confidence            36899999999999999999999999999999988765433322100111124688999999999999999999999999


Q ss_pred             cCCCCCCCC--cchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccc
Q 043792          105 SFEPPSDHS--TYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL  182 (294)
Q Consensus       105 ~a~~~~~~~--~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  182 (294)
                      +|+......  ......+++|+.++.++++++.+..++++||++||.+++........+ ..+++|+.+..|.....+.+
T Consensus        84 ~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~-~~~~~E~~~~~p~~~~~~~~  162 (325)
T PLN02989         84 TASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGP-NDVVDETFFTNPSFAEERKQ  162 (325)
T ss_pred             eCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCC-CCccCcCCCCchhHhccccc
Confidence            998654322  223477899999999999999875356899999998643321110001 33688888877653322336


Q ss_pred             hhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc--------cccccccccCCCccccccHHHHHHHHHhhh
Q 043792          183 WHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP--------YLKGAAEMYEDGVMASVDLRFYVDAHICVF  254 (294)
Q Consensus       183 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~--------~~~~~~~~~~~~~~~~v~v~D~a~~i~~~~  254 (294)
                      +|+.+|.++|.+++.|.++++++++++||+++|||.......        +..++.. +......|+|++|+|++++.++
T Consensus       163 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~-~~~~~r~~i~v~Dva~a~~~~l  241 (325)
T PLN02989        163 WYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNP-FNTTHHRFVDVRDVALAHVKAL  241 (325)
T ss_pred             chHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCC-CCCcCcCeeEHHHHHHHHHHHh
Confidence            899999999999999998889999999999999998643211        2233332 2222345999999999999999


Q ss_pred             cCcCCCCeEEeecccccHHHHHHHHHHHhC
Q 043792          255 EDVSSYGRYLCFNHVINCNEDAMKLARMLL  284 (294)
Q Consensus       255 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  284 (294)
                      +.+..++.|+++++.+|++|+++.+.+.++
T Consensus       242 ~~~~~~~~~ni~~~~~s~~ei~~~i~~~~~  271 (325)
T PLN02989        242 ETPSANGRYIIDGPVVTIKDIENVLREFFP  271 (325)
T ss_pred             cCcccCceEEEecCCCCHHHHHHHHHHHCC
Confidence            876655678887788999999999999886

>PLN02650 dihydroflavonol-4-reductase

Probab=100.00  E-value=1.1e-36  Score=266.27  Aligned_cols=256  Identities=32%  Similarity=0.457  Sum_probs=188.6

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      ..++||||||+||||++++++|+++|++|++++|+.+....+...+.......++.++.+|++|.+.+.++++++|+|||
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH   83 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFH   83 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEE
Confidence            45799999999999999999999999999999998765544433110111123588999999999999999999999999


Q ss_pred             cCCCCCCCCcch-hhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhh---hhhc
Q 043792          105 SFEPPSDHSTYD-ELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNL---CKKF  180 (294)
Q Consensus       105 ~a~~~~~~~~~~-~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~---~~~~  180 (294)
                      +|+......... ...+++|+.++.+++++|.+.+.++||||+||.+++. +...   ....++|+.+.....   ...+
T Consensus        84 ~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~-~~~~---~~~~~~E~~~~~~~~~~~~~~~  159 (351)
T PLN02650         84 VATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVN-VEEH---QKPVYDEDCWSDLDFCRRKKMT  159 (351)
T ss_pred             eCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcc-cCCC---CCCccCcccCCchhhhhccccc
Confidence            998754332222 3678999999999999999872378999999986433 2211   011256664422111   1112


Q ss_pred             cchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc--c------ccccccccCC-CccccccHHHHHHHHH
Q 043792          181 KLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP--Y------LKGAAEMYED-GVMASVDLRFYVDAHI  251 (294)
Q Consensus       181 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~--~------~~~~~~~~~~-~~~~~v~v~D~a~~i~  251 (294)
                      .++|+.||.++|.+++.|+.+++++++++||+++|||.......  +      ..+....+.. ....|+|++|+|++++
T Consensus       160 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~v~V~Dva~a~~  239 (351)
T PLN02650        160 GWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQFVHLDDLCNAHI  239 (351)
T ss_pred             cchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCcCCCcceeeHHHHHHHHH
Confidence            25899999999999999999999999999999999997532111  1      1122211211 2235999999999999


Q ss_pred             hhhcCcCCCCeEEeecccccHHHHHHHHHHHhC
Q 043792          252 CVFEDVSSYGRYLCFNHVINCNEDAMKLARMLL  284 (294)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  284 (294)
                      .+++++..++.|+++++.+++.|+++.+.+.++
T Consensus       240 ~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~~  272 (351)
T PLN02650        240 FLFEHPAAEGRYICSSHDATIHDLAKMLREKYP  272 (351)
T ss_pred             HHhcCcCcCceEEecCCCcCHHHHHHHHHHhCc
Confidence            999876655678777788999999999999765

>PLN02572 UDP-sulfoquinovose synthase

Probab=100.00  E-value=2e-36  Score=270.49  Aligned_cols=264  Identities=19%  Similarity=0.166  Sum_probs=190.3

Q ss_pred             ccCccCCCCCCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCCh-----------------hhHHHHHhhccCC
Q 043792           14 AVDRDGYDSSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKL-----------------QCIEEELINYNEE   76 (294)
Q Consensus        14 ~~~~~~~~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----------------~~l~~~~~~~~~~   76 (294)
                      ++..++..+..++|+||||||+||||++|+++|+++|++|++++|.....                 +.+.. + .....
T Consensus        35 ~~~~~~~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~-~~~~~  112 (442)
T PLN02572         35 TPSAPGSSSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRR-W-KEVSG  112 (442)
T ss_pred             CCCCCCCCccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHH-H-HHhhC
Confidence            33444555567889999999999999999999999999999987532110                 11111 0 00112


Q ss_pred             CCeEEEECCCCChhHHHHHhc--cCCEEEecCCCCCCCCc--c---hhhhHhHhhHHHHHHHHHHHhcCCCc-EEEEecC
Q 043792           77 KKLKVFQADPFDYHSLVNALK--GCSGLFYSFEPPSDHST--Y---DELTAEVETMAAHNVLEACAQTNTVD-KVVFTSS  148 (294)
Q Consensus        77 ~~v~~~~~Dl~~~~~~~~~~~--~~d~Vih~a~~~~~~~~--~---~~~~~~~n~~~~~~ll~~~~~~~~~~-~~v~~Ss  148 (294)
                      .+++++.+|++|.+.+.++++  ++|+|||+|+.......  .   ....+++|+.++.+++++|++. +++ +||++||
T Consensus       113 ~~v~~v~~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~-gv~~~~V~~SS  191 (442)
T PLN02572        113 KEIELYVGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF-APDCHLVKLGT  191 (442)
T ss_pred             CcceEEECCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh-CCCccEEEEec
Confidence            368999999999999999998  48999999976443211  1   1245789999999999999998 775 8999999


Q ss_pred             cceeeeCCCCCCCCCCCCC------CCC---CCChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCC
Q 043792          149 LTAVVWNNHRDNPTSHDFD------ERN---WSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDV  219 (294)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~------e~~---~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~  219 (294)
                      .+  +||.......+.+++      |++   +..|.      ++|+.+|.++|.+++.++.++|++++++||+++|||+.
T Consensus       192 ~~--vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~------s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~  263 (442)
T PLN02572        192 MG--EYGTPNIDIEEGYITITHNGRTDTLPYPKQAS------SFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRT  263 (442)
T ss_pred             ce--ecCCCCCCCcccccccccccccccccCCCCCC------CcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCC
Confidence            85  565432000011111      221   22232      78999999999999999999999999999999999985


Q ss_pred             CCCC----------------c--------cccccc-cccCCCcc--ccccHHHHHHHHHhhhcCcCCCC---eEEeeccc
Q 043792          220 TISN----------------P--------YLKGAA-EMYEDGVM--ASVDLRFYVDAHICVFEDVSSYG---RYLCFNHV  269 (294)
Q Consensus       220 ~~~~----------------~--------~~~~~~-~~~~~~~~--~~v~v~D~a~~i~~~~~~~~~~~---~~~~~~~~  269 (294)
                      ....                .        ..+|++ .+++++.+  .|+||+|+|++++.++++....|   .|+++++.
T Consensus       264 ~~~~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs~~  343 (442)
T PLN02572        264 DETMMDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFTEQ  343 (442)
T ss_pred             cccccccccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCCCc
Confidence            3210                0        223544 46677665  49999999999999998653333   36676678


Q ss_pred             ccHHHHHHHHHHH---hCCCCC
Q 043792          270 INCNEDAMKLARM---LLPPSD  288 (294)
Q Consensus       270 ~s~~~~~~~~~~~---~~~~~~  288 (294)
                      +++.|+++.+.+.   +|.+..
T Consensus       344 ~si~el~~~i~~~~~~~g~~~~  365 (442)
T PLN02572        344 FSVNELAKLVTKAGEKLGLDVE  365 (442)
T ss_pred             eeHHHHHHHHHHHHHhhCCCCC
Confidence            9999999999998   775544

>PLN00198 anthocyanidin reductase; Provisional

Probab=100.00  E-value=6.2e-36  Score=260.37  Aligned_cols=258  Identities=29%  Similarity=0.409  Sum_probs=187.0

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      +++++||||||+||||++|+++|+++|++|++++|+............. ...++++++.+|++|.+.+.++++++|+||
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi   85 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRAL-QELGDLKIFGADLTDEESFEAPIAGCDLVF   85 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhc-CCCCceEEEEcCCCChHHHHHHHhcCCEEE
Confidence            4578999999999999999999999999999999886544332210001 111368899999999999999999999999


Q ss_pred             ecCCCCCCCCcch-hhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChh---hhhh
Q 043792          104 YSFEPPSDHSTYD-ELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVN---LCKK  179 (294)
Q Consensus       104 h~a~~~~~~~~~~-~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~---~~~~  179 (294)
                      |+|+........+ ...+++|+.++.++++++.+..++++||++||.++  |+.........+++|+.+....   ....
T Consensus        86 h~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~--~g~~~~~~~~~~~~E~~~~~~~~~~~~~~  163 (338)
T PLN00198         86 HVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAA--VSINKLSGTGLVMNEKNWTDVEFLTSEKP  163 (338)
T ss_pred             EeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeeccee--eeccCCCCCCceeccccCCchhhhhhcCC
Confidence            9999654332222 25679999999999999988645889999999863  3321100002245555332110   0111


Q ss_pred             ccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCC-c-------cccccc-cccC-------CCccccccH
Q 043792          180 FKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISN-P-------YLKGAA-EMYE-------DGVMASVDL  243 (294)
Q Consensus       180 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~-~-------~~~~~~-~~~~-------~~~~~~v~v  243 (294)
                      +.++|+.+|.++|.+++.|+.+++++++++||++||||...... .       +..+.. ...+       ++...|+||
T Consensus       164 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V  243 (338)
T PLN00198        164 PTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHV  243 (338)
T ss_pred             ccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeEH
Confidence            23789999999999999999889999999999999999843211 0       122222 1212       223469999


Q ss_pred             HHHHHHHHhhhcCcCCCCeEEeecccccHHHHHHHHHHHhC
Q 043792          244 RFYVDAHICVFEDVSSYGRYLCFNHVINCNEDAMKLARMLL  284 (294)
Q Consensus       244 ~D~a~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  284 (294)
                      +|+|++++.+++.+...+.|+.++..+++.|+++.+.+.++
T Consensus       244 ~D~a~a~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~~  284 (338)
T PLN00198        244 EDVCRAHIFLAEKESASGRYICCAANTSVPELAKFLIKRYP  284 (338)
T ss_pred             HHHHHHHHHHhhCcCcCCcEEEecCCCCHHHHHHHHHHHCC
Confidence            99999999999876555678777778999999999998775

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=8.1e-36  Score=263.99  Aligned_cols=250  Identities=14%  Similarity=0.148  Sum_probs=185.2

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHC-CCeEEEEecCCCChhhHHHHHhhc--cCCCCeEEEECCCCChhHHHHHhccCCE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLR-GYTVHAALHNHGKLQCIEEELINY--NEEKKLKVFQADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l~~~~~~~--~~~~~v~~~~~Dl~~~~~~~~~~~~~d~  101 (294)
                      +.|+|||||||||||++|++.|+++ |++|++++|+..+...+..   ..  ....+++++.+|+.|.+.+.++++++|+
T Consensus        13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~---~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~   89 (386)
T PLN02427         13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLE---PDTVPWSGRIQFHRINIKHDSRLEGLIKMADL   89 (386)
T ss_pred             cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhc---cccccCCCCeEEEEcCCCChHHHHHHhhcCCE
Confidence            4578999999999999999999998 5999999987655443322   10  1124689999999999999999999999


Q ss_pred             EEecCCCCCCCC--cchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChh----
Q 043792          102 LFYSFEPPSDHS--TYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVN----  175 (294)
Q Consensus       102 Vih~a~~~~~~~--~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~----  175 (294)
                      |||+|+......  ..+.+.+..|+.++.+++++|++. + ++|||+||.+  +||...    ..+.+|+.+..+.    
T Consensus        90 ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~-~-~r~v~~SS~~--vYg~~~----~~~~~e~~p~~~~~~~~  161 (386)
T PLN02427         90 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-N-KRLIHFSTCE--VYGKTI----GSFLPKDHPLRQDPAFY  161 (386)
T ss_pred             EEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhc-C-CEEEEEeeee--eeCCCc----CCCCCcccccccccccc
Confidence            999998654321  222356778999999999999887 6 7999999985  555432    1123333322110    


Q ss_pred             ------------hhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCC--------C--c--------c
Q 043792          176 ------------LCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTIS--------N--P--------Y  225 (294)
Q Consensus       176 ------------~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~--------~--~--------~  225 (294)
                                  +...+.+.|+.+|.++|++++.++.+++++++++||++||||+....        .  .        +
T Consensus       162 ~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~  241 (386)
T PLN02427        162 VLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL  241 (386)
T ss_pred             cccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHH
Confidence                        00112267999999999999999888899999999999999974310        0  0        2


Q ss_pred             ccccc-cccCCCc--cccccHHHHHHHHHhhhcCcC-CCC-eEEeec--ccccHHHHHHHHHHHhCC
Q 043792          226 LKGAA-EMYEDGV--MASVDLRFYVDAHICVFEDVS-SYG-RYLCFN--HVINCNEDAMKLARMLLP  285 (294)
Q Consensus       226 ~~~~~-~~~~~~~--~~~v~v~D~a~~i~~~~~~~~-~~~-~~~~~~--~~~s~~~~~~~~~~~~~~  285 (294)
                      .++.+ .+++++.  ..|||++|+|++++.+++++. ..+ .|++++  +.+++.|+++.+.+.++.
T Consensus       242 ~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~  308 (386)
T PLN02427        242 LRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAK  308 (386)
T ss_pred             hcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhcc
Confidence            23444 3445444  359999999999999998753 334 587765  379999999999998874

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=100.00  E-value=9.6e-36  Score=260.95  Aligned_cols=249  Identities=14%  Similarity=0.065  Sum_probs=187.0

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc--CCEEE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG--CSGLF  103 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~Vi  103 (294)
                      |++|||||||||||+++++.|+++|++++++.++............. ....++.++.+|++|.+++.+++++  +|+||
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vi   79 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPV-AQSERFAFEKVDICDRAELARVFTEHQPDCVM   79 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhc-ccCCceEEEECCCcChHHHHHHHhhcCCCEEE
Confidence            47999999999999999999999998866554432221111110001 1123678899999999999999984  89999


Q ss_pred             ecCCCCCCCC--cchhhhHhHhhHHHHHHHHHHHhc--------CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCC
Q 043792          104 YSFEPPSDHS--TYDELTAEVETMAAHNVLEACAQT--------NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSD  173 (294)
Q Consensus       104 h~a~~~~~~~--~~~~~~~~~n~~~~~~ll~~~~~~--------~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~  173 (294)
                      |+|+......  ......+++|+.++.+++++|.+.        +++++||++||.+  +|+...  ....+++|+.+..
T Consensus        80 h~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~--vyg~~~--~~~~~~~E~~~~~  155 (355)
T PRK10217         80 HLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDE--VYGDLH--STDDFFTETTPYA  155 (355)
T ss_pred             ECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchh--hcCCCC--CCCCCcCCCCCCC
Confidence            9998764332  223478999999999999999762        2568999999986  455322  1133678887766


Q ss_pred             hhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-------cccccc-cccCCCc--cccccH
Q 043792          174 VNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-------YLKGAA-EMYEDGV--MASVDL  243 (294)
Q Consensus       174 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-------~~~~~~-~~~~~~~--~~~v~v  243 (294)
                      +.      +.|+.||.++|.+++.++.+++++++++||+++|||+......       ...+.+ .+++++.  ..|+|+
T Consensus       156 p~------s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v  229 (355)
T PRK10217        156 PS------SPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYV  229 (355)
T ss_pred             CC------ChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcH
Confidence            66      8899999999999999988899999999999999999643221       233443 4556654  449999


Q ss_pred             HHHHHHHHhhhcCcCCCCeEEee-cccccHHHHHHHHHHHhCC
Q 043792          244 RFYVDAHICVFEDVSSYGRYLCF-NHVINCNEDAMKLARMLLP  285 (294)
Q Consensus       244 ~D~a~~i~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~  285 (294)
                      +|+|+++..+++....++.|+++ ++.++++|+++.+++.++.
T Consensus       230 ~D~a~a~~~~~~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~  272 (355)
T PRK10217        230 EDHARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEE  272 (355)
T ss_pred             HHHHHHHHHHHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhcc
Confidence            99999999999876555568775 4578999999999998874

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=100.00  E-value=1.5e-35  Score=258.72  Aligned_cols=245  Identities=18%  Similarity=0.223  Sum_probs=183.9

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHC-CCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCC-ChhHHHHHhccCCEEE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLR-GYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPF-DYHSLVNALKGCSGLF  103 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~-~~~~~~~~~~~~d~Vi  103 (294)
                      ||+|||||||||||++|++.|+++ |++|++++|+......+.       ...+++++.+|+. +.+.+.++++++|+||
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~~~~d~Vi   73 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLV-------NHPRMHFFEGDITINKEWIEYHVKKCDVIL   73 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhc-------cCCCeEEEeCCCCCCHHHHHHHHcCCCEEE
Confidence            478999999999999999999986 699999998654322221       1236899999997 6777888889999999


Q ss_pred             ecCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChh-hhhhc
Q 043792          104 YSFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVN-LCKKF  180 (294)
Q Consensus       104 h~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~  180 (294)
                      |+|+.....  ..++...+++|+.++.+++++|++. + ++|||+||+.  +|+...    ..+++|+.+.... +...+
T Consensus        74 H~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~-~-~~~v~~SS~~--vyg~~~----~~~~~ee~~~~~~~~~~~p  145 (347)
T PRK11908         74 PLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPSTSE--VYGMCP----DEEFDPEASPLVYGPINKP  145 (347)
T ss_pred             ECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhc-C-CeEEEEecce--eeccCC----CcCcCccccccccCcCCCc
Confidence            999865432  2334477899999999999999988 7 6999999986  455433    2255555432110 00112


Q ss_pred             cchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCC-------Cc--------cccccc-cccCCCc--ccccc
Q 043792          181 KLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTIS-------NP--------YLKGAA-EMYEDGV--MASVD  242 (294)
Q Consensus       181 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~-------~~--------~~~~~~-~~~~~~~--~~~v~  242 (294)
                      .+.|+.+|.++|++++.++.+++++++++||+++|||+....       ..        +..+.+ .+.+++.  ..|+|
T Consensus       146 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~  225 (347)
T PRK11908        146 RWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTD  225 (347)
T ss_pred             cchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeecccc
Confidence            278999999999999999988899999999999999974320       11        234444 3444443  34999


Q ss_pred             HHHHHHHHHhhhcCcC--C-CCeEEeec-c-cccHHHHHHHHHHHhCC
Q 043792          243 LRFYVDAHICVFEDVS--S-YGRYLCFN-H-VINCNEDAMKLARMLLP  285 (294)
Q Consensus       243 v~D~a~~i~~~~~~~~--~-~~~~~~~~-~-~~s~~~~~~~~~~~~~~  285 (294)
                      ++|++++++.+++++.  . ++.|++++ + .+|++|+++.+.+.++.
T Consensus       226 v~D~a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~  273 (347)
T PRK11908        226 IDDGIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAE  273 (347)
T ss_pred             HHHHHHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcC
Confidence            9999999999998753  2 34587766 3 59999999999998884

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=4.1e-35  Score=256.56  Aligned_cols=257  Identities=32%  Similarity=0.429  Sum_probs=187.1

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      +...|+||||||+||||++++++|+++|++|++++|+..+...+...  . ....+++++.+|+.|.+.+.++++++|+|
T Consensus         7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~--~-~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (353)
T PLN02896          7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSK--W-KEGDRLRLFRADLQEEGSFDEAVKGCDGV   83 (353)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHh--h-ccCCeEEEEECCCCCHHHHHHHHcCCCEE
Confidence            44578999999999999999999999999999999986554444331  1 12346889999999999999999999999


Q ss_pred             EecCCCCCCCC----cchh-----hhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCC-CCCCCCCCCCCCC
Q 043792          103 FYSFEPPSDHS----TYDE-----LTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRD-NPTSHDFDERNWS  172 (294)
Q Consensus       103 ih~a~~~~~~~----~~~~-----~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~-~~~~~~~~e~~~~  172 (294)
                      ||+|+......    ....     ..++.|+.++.+++++|++..++++||++||.++  |+.... .....+++|+.+.
T Consensus        84 ih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~v--yg~~~~~~~~~~~~~E~~~~  161 (353)
T PLN02896         84 FHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSIST--LTAKDSNGRWRAVVDETCQT  161 (353)
T ss_pred             EECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhh--ccccccCCCCCCccCcccCC
Confidence            99998754321    1222     2445567999999999988734789999999863  432110 0001256776332


Q ss_pred             Chhh---hhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-----cc---cccccccC-------
Q 043792          173 DVNL---CKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-----YL---KGAAEMYE-------  234 (294)
Q Consensus       173 ~~~~---~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-----~~---~~~~~~~~-------  234 (294)
                      ....   ...+.++|+.||.++|++++.|+++++++++++||++||||.......     +.   .|.....+       
T Consensus       162 p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  241 (353)
T PLN02896        162 PIDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNS  241 (353)
T ss_pred             cHHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCcccccccccccc
Confidence            2110   111225899999999999999998899999999999999997532111     11   23221111       


Q ss_pred             -CCccccccHHHHHHHHHhhhcCcCCCCeEEeecccccHHHHHHHHHHHhC
Q 043792          235 -DGVMASVDLRFYVDAHICVFEDVSSYGRYLCFNHVINCNEDAMKLARMLL  284 (294)
Q Consensus       235 -~~~~~~v~v~D~a~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  284 (294)
                       .+...|||++|+|++++.+++.+...+.|++++.++++.|+++.+.+.++
T Consensus       242 ~~~~~dfi~v~Dva~a~~~~l~~~~~~~~~~~~~~~~s~~el~~~i~~~~~  292 (353)
T PLN02896        242 RMGSIALVHIEDICDAHIFLMEQTKAEGRYICCVDSYDMSELINHLSKEYP  292 (353)
T ss_pred             ccCceeEEeHHHHHHHHHHHHhCCCcCccEEecCCCCCHHHHHHHHHHhCC
Confidence             01235999999999999999876555678777788999999999999886

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=100.00  E-value=6e-35  Score=256.29  Aligned_cols=247  Identities=18%  Similarity=0.138  Sum_probs=186.4

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      .+|+|||||||||||++|++.|+++|++|++++|.....  +..      .....+++.+|++|.+.+..+++++|+|||
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~--~~~------~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih   91 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH--MSE------DMFCHEFHLVDLRVMENCLKVTKGVDHVFN   91 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc--ccc------ccccceEEECCCCCHHHHHHHHhCCCEEEE
Confidence            568999999999999999999999999999999864321  110      111357889999999999988999999999


Q ss_pred             cCCCCCCC---CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCC--CCChhhhhh
Q 043792          105 SFEPPSDH---STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERN--WSDVNLCKK  179 (294)
Q Consensus       105 ~a~~~~~~---~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~--~~~~~~~~~  179 (294)
                      +|+.....   .......++.|+.++.+++++|++. ++++|||+||.+  +|+.....+...++.|+.  +..|.    
T Consensus        92 ~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~-~vk~~V~~SS~~--vYg~~~~~~~~~~~~E~~~~p~~p~----  164 (370)
T PLN02695         92 LAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARIN-GVKRFFYASSAC--IYPEFKQLETNVSLKESDAWPAEPQ----  164 (370)
T ss_pred             cccccCCccccccCchhhHHHHHHHHHHHHHHHHHh-CCCEEEEeCchh--hcCCccccCcCCCcCcccCCCCCCC----
Confidence            99865321   1223356788999999999999988 899999999986  455432011122456654  34444    


Q ss_pred             ccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCC-------c----ccc-ccc-cccCCCcc--ccccHH
Q 043792          180 FKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISN-------P----YLK-GAA-EMYEDGVM--ASVDLR  244 (294)
Q Consensus       180 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~-------~----~~~-~~~-~~~~~~~~--~~v~v~  244 (294)
                        +.|+.+|.++|++++.++.+++++++++||+++|||+.....       .    +++ +.+ .+++++.+  .|+|++
T Consensus       165 --s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~  242 (370)
T PLN02695        165 --DAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFID  242 (370)
T ss_pred             --CHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHH
Confidence              789999999999999998888999999999999999753211       0    222 222 45666544  499999


Q ss_pred             HHHHHHHhhhcCcCCCCeEEee-cccccHHHHHHHHHHHhCCCCCC
Q 043792          245 FYVDAHICVFEDVSSYGRYLCF-NHVINCNEDAMKLARMLLPPSDT  289 (294)
Q Consensus       245 D~a~~i~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~  289 (294)
                      |++++++++++.. ..+.|+++ ++.++++|+++.+.+..|.+.++
T Consensus       243 D~a~ai~~~~~~~-~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i  287 (370)
T PLN02695        243 ECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEIALSFENKKLPI  287 (370)
T ss_pred             HHHHHHHHHHhcc-CCCceEecCCCceeHHHHHHHHHHHhCCCCCc
Confidence            9999999988764 34557765 46799999999999988865443

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=2.1e-35  Score=262.85  Aligned_cols=246  Identities=17%  Similarity=0.154  Sum_probs=183.8

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC-hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK-LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      +.|||||||||||||++|+++|+++|++|++++|.... ...+..   . ....+++++.+|+.+..     +.++|+||
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~---~-~~~~~~~~~~~Di~~~~-----~~~~D~Vi  189 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVH---L-FGNPRFELIRHDVVEPI-----LLEVDQIY  189 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhh---h-ccCCceEEEECcccccc-----ccCCCEEE
Confidence            45899999999999999999999999999999986432 222221   1 11246888999987643     46899999


Q ss_pred             ecCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhcc
Q 043792          104 YSFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFK  181 (294)
Q Consensus       104 h~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  181 (294)
                      |+|+.....  ..+....+++|+.++.+++++|++. ++ +|||+||.+  +|+...    ..+.+|+.+....+. .+.
T Consensus       190 HlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~-g~-r~V~~SS~~--VYg~~~----~~p~~E~~~~~~~p~-~p~  260 (436)
T PLN02166        190 HLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-GA-RFLLTSTSE--VYGDPL----EHPQKETYWGNVNPI-GER  260 (436)
T ss_pred             ECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEECcHH--HhCCCC----CCCCCccccccCCCC-CCC
Confidence            999865432  2334578999999999999999998 75 899999985  566443    346667642211111 112


Q ss_pred             chhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCC-c--------cccccc-cccCCCc--cccccHHHHHHH
Q 043792          182 LWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISN-P--------YLKGAA-EMYEDGV--MASVDLRFYVDA  249 (294)
Q Consensus       182 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~-~--------~~~~~~-~~~~~~~--~~~v~v~D~a~~  249 (294)
                      +.|+.+|..+|++++.+..+++++++++||+++|||+..... .        +..+.+ .+++++.  ..|+|++|++++
T Consensus       261 s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~a  340 (436)
T PLN02166        261 SCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDG  340 (436)
T ss_pred             CchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHH
Confidence            789999999999999998888999999999999999853211 1        334444 5566664  349999999999


Q ss_pred             HHhhhcCcCCCCeEEee-cccccHHHHHHHHHHHhCCCCCC
Q 043792          250 HICVFEDVSSYGRYLCF-NHVINCNEDAMKLARMLLPPSDT  289 (294)
Q Consensus       250 i~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~  289 (294)
                      ++.+++.. ..+.|+++ ++.+|+.|+++.+++.++.+.++
T Consensus       341 i~~~~~~~-~~giyNIgs~~~~Si~ela~~I~~~~g~~~~i  380 (436)
T PLN02166        341 LVALMEGE-HVGPFNLGNPGEFTMLELAEVVKETIDSSATI  380 (436)
T ss_pred             HHHHHhcC-CCceEEeCCCCcEeHHHHHHHHHHHhCCCCCe
Confidence            99998754 34678765 56799999999999999865443

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=100.00  E-value=7.8e-35  Score=252.46  Aligned_cols=246  Identities=25%  Similarity=0.286  Sum_probs=192.9

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEecC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSF  106 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~a  106 (294)
                      |+|+||||+||||+++++.|+++|++|++++|+++....+.        ..+++++.+|+.|.+++.++++++|+|||++
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a   72 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLE--------GLDVEIVEGDLRDPASLRKAVAGCRALFHVA   72 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccc--------cCCceEEEeeCCCHHHHHHHHhCCCEEEEec
Confidence            58999999999999999999999999999999865432221        1268899999999999999999999999999


Q ss_pred             CCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHh
Q 043792          107 EPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGL  186 (294)
Q Consensus       107 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~  186 (294)
                      +............++.|+.++.++++++.+. ++++||++||..  +|+...   ...+++|+.+..+..   ..+.|+.
T Consensus        73 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~--~~~~~~---~~~~~~e~~~~~~~~---~~~~Y~~  143 (328)
T TIGR03466        73 ADYRLWAPDPEEMYAANVEGTRNLLRAALEA-GVERVVYTSSVA--TLGVRG---DGTPADETTPSSLDD---MIGHYKR  143 (328)
T ss_pred             eecccCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEechh--hcCcCC---CCCCcCccCCCCccc---ccChHHH
Confidence            8654444445578999999999999999988 889999999986  344211   023677776654431   1157999


Q ss_pred             hHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-------cccccccccCCCccccccHHHHHHHHHhhhcCcCC
Q 043792          187 SKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-------YLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVSS  259 (294)
Q Consensus       187 sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-------~~~~~~~~~~~~~~~~v~v~D~a~~i~~~~~~~~~  259 (294)
                      +|.++|++++.+..+++++++++||+++||++......       ...+..+...+....|+|++|+|++++.+++++..
T Consensus       144 sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~  223 (328)
T TIGR03466       144 SKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLALERGRI  223 (328)
T ss_pred             HHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHHHHhCCCC
Confidence            99999999999988889999999999999998542211       11222233334445699999999999999987654


Q ss_pred             CCeEEeecccccHHHHHHHHHHHhCCCCCC
Q 043792          260 YGRYLCFNHVINCNEDAMKLARMLLPPSDT  289 (294)
Q Consensus       260 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~  289 (294)
                      +..|+++++.+++.|+++.+.+.+|.+...
T Consensus       224 ~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~  253 (328)
T TIGR03466       224 GERYILGGENLTLKQILDKLAEITGRPAPR  253 (328)
T ss_pred             CceEEecCCCcCHHHHHHHHHHHhCCCCCC
Confidence            445777788899999999999999976443

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02206 UDP-glucuronate decarboxylase

Probab=100.00  E-value=6.1e-35  Score=260.30  Aligned_cols=246  Identities=17%  Similarity=0.159  Sum_probs=183.5

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC-hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK-LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      +.|||||||||||||++|+++|+++|++|++++|.... .+.+..   . ....+++++.+|+.+..     +.++|+||
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~---~-~~~~~~~~i~~D~~~~~-----l~~~D~Vi  188 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMH---H-FSNPNFELIRHDVVEPI-----LLEVDQIY  188 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhh---h-ccCCceEEEECCccChh-----hcCCCEEE
Confidence            46899999999999999999999999999999875332 122211   1 12346888999987653     46799999


Q ss_pred             ecCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhcc
Q 043792          104 YSFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFK  181 (294)
Q Consensus       104 h~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  181 (294)
                      |+|+.....  ..++...+++|+.++.+++++|++. ++ +|||+||..  +|+...    ..+.+|+.+....+. .+.
T Consensus       189 HlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~-g~-r~V~~SS~~--VYg~~~----~~p~~E~~~~~~~P~-~~~  259 (442)
T PLN02206        189 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GA-RFLLTSTSE--VYGDPL----QHPQVETYWGNVNPI-GVR  259 (442)
T ss_pred             EeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEECChH--HhCCCC----CCCCCccccccCCCC-Ccc
Confidence            999865432  2234578899999999999999998 75 899999985  555443    335666643211111 112


Q ss_pred             chhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCC-c--------cccccc-cccCCCcc--ccccHHHHHHH
Q 043792          182 LWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISN-P--------YLKGAA-EMYEDGVM--ASVDLRFYVDA  249 (294)
Q Consensus       182 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~-~--------~~~~~~-~~~~~~~~--~~v~v~D~a~~  249 (294)
                      +.|+.+|.++|+++..|..+++++++++||+++|||+..... .        ++.+.+ .+++++.+  .|+|++|+|++
T Consensus       260 s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~a  339 (442)
T PLN02206        260 SCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEG  339 (442)
T ss_pred             chHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHH
Confidence            789999999999999998888999999999999999843211 1        233444 55666653  49999999999


Q ss_pred             HHhhhcCcCCCCeEEee-cccccHHHHHHHHHHHhCCCCCC
Q 043792          250 HICVFEDVSSYGRYLCF-NHVINCNEDAMKLARMLLPPSDT  289 (294)
Q Consensus       250 i~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~  289 (294)
                      ++.+++.. ..+.|+++ ++.+++.|+++.+++.++++.++
T Consensus       340 i~~a~e~~-~~g~yNIgs~~~~sl~Elae~i~~~~g~~~~i  379 (442)
T PLN02206        340 LMRLMEGE-HVGPFNLGNPGEFTMLELAKVVQETIDPNAKI  379 (442)
T ss_pred             HHHHHhcC-CCceEEEcCCCceeHHHHHHHHHHHhCCCCce
Confidence            99998764 34578765 56799999999999999876544

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=1.4e-34  Score=252.33  Aligned_cols=244  Identities=16%  Similarity=0.067  Sum_probs=188.7

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC--hhhHHHHHhhc-----cCCCCeEEEECCCCChhHHHHHhcc-
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK--LQCIEEELINY-----NEEKKLKVFQADPFDYHSLVNALKG-   98 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~l~~~~~~~-----~~~~~v~~~~~Dl~~~~~~~~~~~~-   98 (294)
                      |+||||||+||||++|+++|+++|++|++++|+.+.  ...+..   ..     ....+++++.+|++|.+.+.+++++ 
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEH---IYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhh---hhhccccccccceeEEEeccCCHHHHHHHHHhC
Confidence            589999999999999999999999999999997642  122221   10     0123688999999999999999985 


Q ss_pred             -CCEEEecCCCCCCCCc--chhhhHhHhhHHHHHHHHHHHhcCCC---cEEEEecCcceeeeCCCCCCCCCCCCCCCCCC
Q 043792           99 -CSGLFYSFEPPSDHST--YDELTAEVETMAAHNVLEACAQTNTV---DKVVFTSSLTAVVWNNHRDNPTSHDFDERNWS  172 (294)
Q Consensus        99 -~d~Vih~a~~~~~~~~--~~~~~~~~n~~~~~~ll~~~~~~~~~---~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~  172 (294)
                       +|+|||+|+.......  .....+++|+.++.+++++|.+. ++   ++|||+||.+  +||...    ..+++|+.+.
T Consensus        78 ~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~-~~~~~~~~v~~SS~~--vyg~~~----~~~~~E~~~~  150 (343)
T TIGR01472        78 KPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTL-GLIKSVKFYQASTSE--LYGKVQ----EIPQNETTPF  150 (343)
T ss_pred             CCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHh-CCCcCeeEEEeccHH--hhCCCC----CCCCCCCCCC
Confidence             6999999997554322  23366788999999999999987 65   3899999986  566443    3467888877


Q ss_pred             ChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCC--c--------cccccc--cccCCCc--c
Q 043792          173 DVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISN--P--------YLKGAA--EMYEDGV--M  238 (294)
Q Consensus       173 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~--~--------~~~~~~--~~~~~~~--~  238 (294)
                      .|.      ++|+.||.++|.+++.++.++++++++.|+.++|||......  .        +..++.  ..++++.  .
T Consensus       151 ~p~------~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r  224 (343)
T TIGR01472       151 YPR------SPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKR  224 (343)
T ss_pred             CCC------ChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCcccc
Confidence            666      899999999999999998888999999999999999732211  0        223432  2345554  4


Q ss_pred             ccccHHHHHHHHHhhhcCcCCCCeEEee-cccccHHHHHHHHHHHhCCCC
Q 043792          239 ASVDLRFYVDAHICVFEDVSSYGRYLCF-NHVINCNEDAMKLARMLLPPS  287 (294)
Q Consensus       239 ~~v~v~D~a~~i~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~  287 (294)
                      .|+||+|+|++++.+++.+. .+.|+++ ++++|++|+++.+.+.+|.+.
T Consensus       225 d~i~V~D~a~a~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~~~  273 (343)
T TIGR01472       225 DWGHAKDYVEAMWLMLQQDK-PDDYVIATGETHSVREFVEVSFEYIGKTL  273 (343)
T ss_pred             CceeHHHHHHHHHHHHhcCC-CccEEecCCCceeHHHHHHHHHHHcCCCc
Confidence            49999999999999997653 3567665 567999999999999998543

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=3.7e-35  Score=234.55  Aligned_cols=249  Identities=17%  Similarity=0.168  Sum_probs=200.7

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ....++|+||||.||||||||+.|..+|++|++++...........   ......+++.+.-|+.     ..++.++|-|
T Consensus        24 p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~---~~~~~~~fel~~hdv~-----~pl~~evD~I   95 (350)
T KOG1429|consen   24 PSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLE---HWIGHPNFELIRHDVV-----EPLLKEVDQI   95 (350)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcc---hhccCcceeEEEeech-----hHHHHHhhhh
Confidence            4456999999999999999999999999999999875443322222   2234457777777874     4478899999


Q ss_pred             EecCCCCCCCCcch--hhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhc
Q 043792          103 FYSFEPPSDHSTYD--ELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKF  180 (294)
Q Consensus       103 ih~a~~~~~~~~~~--~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~  180 (294)
                      +|+|++.+......  -+.+..|..++.+.+-.|++. + +||++.||+  .+||+..    .+|..|+-+....+....
T Consensus        96 yhLAapasp~~y~~npvktIktN~igtln~lglakrv-~-aR~l~aSTs--eVYgdp~----~hpq~e~ywg~vnpigpr  167 (350)
T KOG1429|consen   96 YHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRV-G-ARFLLASTS--EVYGDPL----VHPQVETYWGNVNPIGPR  167 (350)
T ss_pred             hhhccCCCCcccccCccceeeecchhhHHHHHHHHHh-C-ceEEEeecc--cccCCcc----cCCCccccccccCcCCch
Confidence            99999877553332  288999999999999999999 7 799999998  5888766    778888877666544433


Q ss_pred             cchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc---------cccccc-cccCCCccc--cccHHHHHH
Q 043792          181 KLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP---------YLKGAA-EMYEDGVMA--SVDLRFYVD  248 (294)
Q Consensus       181 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~---------~~~~~~-~~~~~~~~~--~v~v~D~a~  248 (294)
                       +.|+..|.++|.++.+|.++.|+.+.|.|+.++|||..+....         .+++++ .++++|.+.  |+||+|+++
T Consensus       168 -~cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Ve  246 (350)
T KOG1429|consen  168 -SCYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVE  246 (350)
T ss_pred             -hhhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHH
Confidence             8899999999999999999999999999999999998765433         555666 899999988  999999999


Q ss_pred             HHHhhhcCcCCCCeEEeecccccHHHHHHHHHHHhCCCCC
Q 043792          249 AHICVFEDVSSYGRYLCFNHVINCNEDAMKLARMLLPPSD  288 (294)
Q Consensus       249 ~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~  288 (294)
                      +++.+++++..+...+..++.+|+.|+++++.+..++...
T Consensus       247 gll~Lm~s~~~~pvNiGnp~e~Tm~elAemv~~~~~~~s~  286 (350)
T KOG1429|consen  247 GLLRLMESDYRGPVNIGNPGEFTMLELAEMVKELIGPVSE  286 (350)
T ss_pred             HHHHHhcCCCcCCcccCCccceeHHHHHHHHHHHcCCCcc
Confidence            9999998876544344456789999999999998865543

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=100.00  E-value=3.1e-34  Score=250.63  Aligned_cols=246  Identities=19%  Similarity=0.060  Sum_probs=186.3

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc--CCEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG--CSGL  102 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~V  102 (294)
                      ++|+||||||+||||+++++.|+++|++|++++|+..........  . ....++.++.+|++|.+++.+++++  +|+|
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~--~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~v   79 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFEL--L-NLAKKIEDHFGDIRDAAKLRKAIAEFKPEIV   79 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHH--H-hhcCCceEEEccCCCHHHHHHHHhhcCCCEE
Confidence            468999999999999999999999999999999977654333221  1 1123577899999999999999985  6999


Q ss_pred             EecCCCCCCCC--cchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhc
Q 043792          103 FYSFEPPSDHS--TYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKF  180 (294)
Q Consensus       103 ih~a~~~~~~~--~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~  180 (294)
                      ||+|+......  .+....+++|+.++.++++++++.+.+++||++||..  +|+...   ...+++|+.+..+.     
T Consensus        80 ih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~--vyg~~~---~~~~~~e~~~~~p~-----  149 (349)
T TIGR02622        80 FHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDK--CYRNDE---WVWGYRETDPLGGH-----  149 (349)
T ss_pred             EECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechh--hhCCCC---CCCCCccCCCCCCC-----
Confidence            99998644322  2334788999999999999998772278999999985  455322   02256777766655     


Q ss_pred             cchhHhhHHHHHHHHHHHHHhc-------CCeEEEEecCceeCCCCCCCCc--------cccccccccCCC--ccccccH
Q 043792          181 KLWHGLSKTLAEKTAWALAMDR-------GISMVSINGGLVMGPDVTISNP--------YLKGAAEMYEDG--VMASVDL  243 (294)
Q Consensus       181 ~~~Y~~sK~~~e~~~~~~~~~~-------~~~~~ilrp~~i~G~~~~~~~~--------~~~~~~~~~~~~--~~~~v~v  243 (294)
                       ++|+.+|.++|.+++.++.++       +++++++||+++|||+......        +..|.....+++  ...|+|+
T Consensus       150 -~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~v  228 (349)
T TIGR02622       150 -DPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQHV  228 (349)
T ss_pred             -CcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceeeH
Confidence             889999999999999887654       8999999999999997532211        334555344444  3349999


Q ss_pred             HHHHHHHHhhhcCc-----CCCCeEEeec---ccccHHHHHHHHHHHhC
Q 043792          244 RFYVDAHICVFEDV-----SSYGRYLCFN---HVINCNEDAMKLARMLL  284 (294)
Q Consensus       244 ~D~a~~i~~~~~~~-----~~~~~~~~~~---~~~s~~~~~~~~~~~~~  284 (294)
                      +|+|++++.+++..     ..++.|++++   +++++.++++.+.+.++
T Consensus       229 ~D~a~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~  277 (349)
T TIGR02622       229 LEPLSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWW  277 (349)
T ss_pred             HHHHHHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhc
Confidence            99999999887642     1235688864   57999999999988765

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=100.00  E-value=3.3e-34  Score=268.71  Aligned_cols=249  Identities=16%  Similarity=0.201  Sum_probs=189.0

Q ss_pred             CCCCCCeEEEeCCCchHHHHHHHHHHHC-CCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhH-HHHHhccC
Q 043792           22 SSNATKTVCVMDASGHFASALVRRLLLR-GYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHS-LVNALKGC   99 (294)
Q Consensus        22 ~~~~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~-~~~~~~~~   99 (294)
                      +..++|+|||||||||||++|+++|+++ |++|++++|.......+.       ...+++++.+|++|... +.++++++
T Consensus       311 ~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~-------~~~~~~~~~gDl~d~~~~l~~~l~~~  383 (660)
T PRK08125        311 SAKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFL-------GHPRFHFVEGDISIHSEWIEYHIKKC  383 (660)
T ss_pred             hhhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhc-------CCCceEEEeccccCcHHHHHHHhcCC
Confidence            3456899999999999999999999986 799999999764322111       12478999999998655 57788899


Q ss_pred             CEEEecCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChh-h
Q 043792          100 SGLFYSFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVN-L  176 (294)
Q Consensus       100 d~Vih~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~-~  176 (294)
                      |+|||+|+.....  .......+++|+.++.+++++|++. + ++|||+||..  +||...    ..+++|+.+..+. +
T Consensus       384 D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~-~-~~~V~~SS~~--vyg~~~----~~~~~E~~~~~~~~p  455 (660)
T PRK08125        384 DVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKY-N-KRIIFPSTSE--VYGMCT----DKYFDEDTSNLIVGP  455 (660)
T ss_pred             CEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhc-C-CeEEEEcchh--hcCCCC----CCCcCccccccccCC
Confidence            9999999875532  2233477899999999999999998 7 7999999985  565433    3367887654211 1


Q ss_pred             hhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCC-------Cc--------cccccc-cccCCCc--c
Q 043792          177 CKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTIS-------NP--------YLKGAA-EMYEDGV--M  238 (294)
Q Consensus       177 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~-------~~--------~~~~~~-~~~~~~~--~  238 (294)
                      ...+.+.|+.+|.++|++++.++.+++++++++||+++|||+....       ..        +..+++ .+.+++.  .
T Consensus       456 ~~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~r  535 (660)
T PRK08125        456 INKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKR  535 (660)
T ss_pred             CCCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceee
Confidence            1122267999999999999999888899999999999999975320       01        233444 3445554  4


Q ss_pred             ccccHHHHHHHHHhhhcCcC--CCC-eEEeecc--cccHHHHHHHHHHHhCC
Q 043792          239 ASVDLRFYVDAHICVFEDVS--SYG-RYLCFNH--VINCNEDAMKLARMLLP  285 (294)
Q Consensus       239 ~~v~v~D~a~~i~~~~~~~~--~~~-~~~~~~~--~~s~~~~~~~~~~~~~~  285 (294)
                      .|+|++|+|++++.++++..  ..+ .|+++++  .++++|+++.+.+.++.
T Consensus       536 d~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~  587 (660)
T PRK08125        536 CFTDIRDGIEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEK  587 (660)
T ss_pred             ceeeHHHHHHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhcc
Confidence            49999999999999998643  234 5877653  59999999999999884

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=100.00  E-value=9e-34  Score=244.29  Aligned_cols=240  Identities=23%  Similarity=0.174  Sum_probs=191.3

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccC-CEEEec
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGC-SGLFYS  105 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~-d~Vih~  105 (294)
                      |+||||||+||||++|+++|+++|++|++++|...+.....         .++.++.+|++|.+.+.+.++.+ |+|||+
T Consensus         1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~d~~~~~~~~~~~~~~~d~vih~   71 (314)
T COG0451           1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL---------SGVEFVVLDLTDRDLVDELAKGVPDAVIHL   71 (314)
T ss_pred             CeEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc---------cccceeeecccchHHHHHHHhcCCCEEEEc
Confidence            35999999999999999999999999999999776543221         36889999999998888888888 999999


Q ss_pred             CCCCCCCCcc---hhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCC-CCCChhhhhhcc
Q 043792          106 FEPPSDHSTY---DELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDER-NWSDVNLCKKFK  181 (294)
Q Consensus       106 a~~~~~~~~~---~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~-~~~~~~~~~~~~  181 (294)
                      |+........   ....++.|+.++.+++++|++. ++++|||.||.+ .+++...    ..+++|+ .+..|.      
T Consensus        72 aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~-~~~~~v~~ss~~-~~~~~~~----~~~~~E~~~~~~p~------  139 (314)
T COG0451          72 AAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAA-GVKRFVFASSVS-VVYGDPP----PLPIDEDLGPPRPL------  139 (314)
T ss_pred             cccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeCCCc-eECCCCC----CCCcccccCCCCCC------
Confidence            9987654442   2358999999999999999997 999999977765 3333322    3377887 455555      


Q ss_pred             chhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCC---Cc-------cccccc--cccCCCcc--ccccHHHHH
Q 043792          182 LWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTIS---NP-------YLKGAA--EMYEDGVM--ASVDLRFYV  247 (294)
Q Consensus       182 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~---~~-------~~~~~~--~~~~~~~~--~~v~v~D~a  247 (294)
                      ++|+.+|.++|+.++.+..+++++++++||+++|||+....   ..       +.++.+  ...+++..  .++|++|++
T Consensus       140 ~~Yg~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  219 (314)
T COG0451         140 NPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVA  219 (314)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHH
Confidence            68999999999999999988899999999999999997654   11       122333  23334444  499999999


Q ss_pred             HHHHhhhcCcCCCCeEEeecc--cccHHHHHHHHHHHhCCCCC
Q 043792          248 DAHICVFEDVSSYGRYLCFNH--VINCNEDAMKLARMLLPPSD  288 (294)
Q Consensus       248 ~~i~~~~~~~~~~~~~~~~~~--~~s~~~~~~~~~~~~~~~~~  288 (294)
                      ++++.+++++... .|+++++  .++++|+++.+.+.++....
T Consensus       220 ~~~~~~~~~~~~~-~~ni~~~~~~~~~~e~~~~~~~~~~~~~~  261 (314)
T COG0451         220 DALLLALENPDGG-VFNIGSGTAEITVRELAEAVAEAVGSKAP  261 (314)
T ss_pred             HHHHHHHhCCCCc-EEEeCCCCCcEEHHHHHHHHHHHhCCCCc
Confidence            9999999987766 7777654  69999999999999987744

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=100.00  E-value=2.7e-33  Score=263.69  Aligned_cols=249  Identities=15%  Similarity=0.148  Sum_probs=189.6

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHC--CCeEEEEecCC--CChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHh--cc
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLR--GYTVHAALHNH--GKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNAL--KG   98 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~--~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~--~~   98 (294)
                      ++|+|||||||||||++|++.|+++  +++|++++|..  .....+..   . ....+++++.+|++|.+.+..++  .+
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~---~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~   80 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNP---S-KSSPNFKFVKGDIASADLVNYLLITEG   80 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhh---c-ccCCCeEEEECCCCChHHHHHHHhhcC
Confidence            4589999999999999999999998  68999998753  11122211   1 12347899999999998887766  57


Q ss_pred             CCEEEecCCCCCCCC--cchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhh
Q 043792           99 CSGLFYSFEPPSDHS--TYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNL  176 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~--~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~  176 (294)
                      +|+|||+|+......  ......+++|+.++.+++++|++.+.+++|||+||..  +|+.....+ .....|+.+..|. 
T Consensus        81 ~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~--vyg~~~~~~-~~~~~E~~~~~p~-  156 (668)
T PLN02260         81 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDE--VYGETDEDA-DVGNHEASQLLPT-  156 (668)
T ss_pred             CCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchH--HhCCCcccc-ccCccccCCCCCC-
Confidence            999999999865432  2234678999999999999999883389999999985  555433011 1123566665555 


Q ss_pred             hhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-------cccccc-cccCCCc--cccccHHHH
Q 043792          177 CKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-------YLKGAA-EMYEDGV--MASVDLRFY  246 (294)
Q Consensus       177 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-------~~~~~~-~~~~~~~--~~~v~v~D~  246 (294)
                           ++|+.+|.++|++++.+..+++++++++||++||||+......       ...+.. .+++++.  ..|+|++|+
T Consensus       157 -----~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dv  231 (668)
T PLN02260        157 -----NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDV  231 (668)
T ss_pred             -----CCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHH
Confidence                 7899999999999999988889999999999999998543221       233443 4556654  349999999


Q ss_pred             HHHHHhhhcCcCCCCeEEeec-ccccHHHHHHHHHHHhCCC
Q 043792          247 VDAHICVFEDVSSYGRYLCFN-HVINCNEDAMKLARMLLPP  286 (294)
Q Consensus       247 a~~i~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~  286 (294)
                      |++++.+++....++.|++++ +.+++.|+++.+++.+|.+
T Consensus       232 a~a~~~~l~~~~~~~vyni~~~~~~s~~el~~~i~~~~g~~  272 (668)
T PLN02260        232 AEAFEVVLHKGEVGHVYNIGTKKERRVIDVAKDICKLFGLD  272 (668)
T ss_pred             HHHHHHHHhcCCCCCEEEECCCCeeEHHHHHHHHHHHhCCC
Confidence            999999987765566787764 6799999999999999865

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=100.00  E-value=4.6e-33  Score=243.70  Aligned_cols=246  Identities=15%  Similarity=0.086  Sum_probs=183.5

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCe-EEEEecCCC--ChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc--CCE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYT-VHAALHNHG--KLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG--CSG  101 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~--~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~  101 (294)
                      ||||||||+||||++|++.|+++|++ |+++++...  ....+..   . ....++.++.+|++|.+++.+++++  +|+
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   76 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLAD---V-SDSERYVFEHADICDRAELDRIFAQHQPDA   76 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHh---c-ccCCceEEEEecCCCHHHHHHHHHhcCCCE
Confidence            58999999999999999999999976 555554321  1222221   1 1124578899999999999999974  899


Q ss_pred             EEecCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhc--------CCCcEEEEecCcceeeeCCCCCCCC-------CC
Q 043792          102 LFYSFEPPSDH--STYDELTAEVETMAAHNVLEACAQT--------NTVDKVVFTSSLTAVVWNNHRDNPT-------SH  164 (294)
Q Consensus       102 Vih~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~--------~~~~~~v~~Ss~~~~~~~~~~~~~~-------~~  164 (294)
                      |||+|+.....  ....+..+++|+.++.+++++|++.        .++++||++||..  +|+... .+.       ..
T Consensus        77 vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~--vyg~~~-~~~~~~~~~~~~  153 (352)
T PRK10084         77 VMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDE--VYGDLP-HPDEVENSEELP  153 (352)
T ss_pred             EEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchh--hcCCCC-ccccccccccCC
Confidence            99999875432  2234588999999999999999863        2467999999986  444321 000       11


Q ss_pred             CCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-------cccccc-cccCCC
Q 043792          165 DFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-------YLKGAA-EMYEDG  236 (294)
Q Consensus       165 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-------~~~~~~-~~~~~~  236 (294)
                      +++|+.+..|.      +.|+.+|.++|.+++.++.+++++++++|++++|||+......       +..+.. ..++++
T Consensus       154 ~~~E~~~~~p~------~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g  227 (352)
T PRK10084        154 LFTETTAYAPS------SPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKG  227 (352)
T ss_pred             CccccCCCCCC------ChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCC
Confidence            46777776666      8899999999999999988889999999999999998532221       233433 455554


Q ss_pred             --ccccccHHHHHHHHHhhhcCcCCCCeEEeec-ccccHHHHHHHHHHHhCC
Q 043792          237 --VMASVDLRFYVDAHICVFEDVSSYGRYLCFN-HVINCNEDAMKLARMLLP  285 (294)
Q Consensus       237 --~~~~v~v~D~a~~i~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~  285 (294)
                        ...|+|++|+|++++.+++.+..++.|++++ +.+++.++++.+++.++.
T Consensus       228 ~~~~~~v~v~D~a~a~~~~l~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~  279 (352)
T PRK10084        228 DQIRDWLYVEDHARALYKVVTEGKAGETYNIGGHNEKKNLDVVLTICDLLDE  279 (352)
T ss_pred             CeEEeeEEHHHHHHHHHHHHhcCCCCceEEeCCCCcCcHHHHHHHHHHHhcc
Confidence              3449999999999999988655455687764 578999999999998874

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=7.7e-33  Score=241.14  Aligned_cols=247  Identities=15%  Similarity=0.052  Sum_probs=189.3

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCCh--hhHHHHHh--hccCCCCeEEEECCCCChhHHHHHhcc-
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKL--QCIEEELI--NYNEEKKLKVFQADPFDYHSLVNALKG-   98 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~l~~~~~--~~~~~~~v~~~~~Dl~~~~~~~~~~~~-   98 (294)
                      .++|+||||||+||||++++++|+++|++|++++|+.+..  ..+.. +.  ......++.++.+|++|.+++.+++++ 
T Consensus         4 ~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   82 (340)
T PLN02653          4 PPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDH-IYIDPHPNKARMKLHYGDLSDASSLRRWLDDI   82 (340)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhh-hccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence            3468999999999999999999999999999999875421  12221 00  001123588999999999999999875 


Q ss_pred             -CCEEEecCCCCCCCC--cchhhhHhHhhHHHHHHHHHHHhcCCCc-----EEEEecCcceeeeCCCCCCCCCCCCCCCC
Q 043792           99 -CSGLFYSFEPPSDHS--TYDELTAEVETMAAHNVLEACAQTNTVD-----KVVFTSSLTAVVWNNHRDNPTSHDFDERN  170 (294)
Q Consensus        99 -~d~Vih~a~~~~~~~--~~~~~~~~~n~~~~~~ll~~~~~~~~~~-----~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~  170 (294)
                       +|+|||+|+......  ......+++|+.++.++++++.+. +++     +||++||.+  +||...    . +++|+.
T Consensus        83 ~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~~~~~~v~~Ss~~--vyg~~~----~-~~~E~~  154 (340)
T PLN02653         83 KPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLH-GQETGRQIKYYQAGSSE--MYGSTP----P-PQSETT  154 (340)
T ss_pred             CCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHh-ccccccceeEEEeccHH--HhCCCC----C-CCCCCC
Confidence             699999999754332  223467789999999999999988 654     899999985  566544    3 678888


Q ss_pred             CCChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCC--c--------cccccc-cc-cCCCc-
Q 043792          171 WSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISN--P--------YLKGAA-EM-YEDGV-  237 (294)
Q Consensus       171 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~--~--------~~~~~~-~~-~~~~~-  237 (294)
                      +..|.      +.|+.||.++|.+++.++.+++++++..|+.++|||......  .        +..+.. .+ .+++. 
T Consensus       155 ~~~p~------~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~  228 (340)
T PLN02653        155 PFHPR------SPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDA  228 (340)
T ss_pred             CCCCC------ChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcc
Confidence            77766      899999999999999999888999999999999999643211  0        113433 23 35554 


Q ss_pred             -cccccHHHHHHHHHhhhcCcCCCCeEEee-cccccHHHHHHHHHHHhCCC
Q 043792          238 -MASVDLRFYVDAHICVFEDVSSYGRYLCF-NHVINCNEDAMKLARMLLPP  286 (294)
Q Consensus       238 -~~~v~v~D~a~~i~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~  286 (294)
                       ..|+|++|+|++++.+++... ++.|+++ +++++++|+++.+.+.+|.+
T Consensus       229 ~rd~i~v~D~a~a~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~~  278 (340)
T PLN02653        229 SRDWGFAGDYVEAMWLMLQQEK-PDDYVVATEESHTVEEFLEEAFGYVGLN  278 (340)
T ss_pred             eecceeHHHHHHHHHHHHhcCC-CCcEEecCCCceeHHHHHHHHHHHcCCC
Confidence             349999999999999998653 4567664 56799999999999999853

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=100.00  E-value=1.5e-33  Score=233.17  Aligned_cols=217  Identities=23%  Similarity=0.236  Sum_probs=177.7

Q ss_pred             EEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccC--CEEEecC
Q 043792           29 VCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGC--SGLFYSF  106 (294)
Q Consensus        29 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~--d~Vih~a  106 (294)
                      |||||||||||++++++|+++|++|+.+.|+.........   .    .+++++.+|+.|.+.+.+++++.  |+|||+|
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~---~----~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a   73 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEK---K----LNVEFVIGDLTDKEQLEKLLEKANIDVVIHLA   73 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHH---H----TTEEEEESETTSHHHHHHHHHHHTESEEEEEB
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccc---c----ceEEEEEeeccccccccccccccCceEEEEee
Confidence            7999999999999999999999999999998766543332   1    28999999999999999999865  9999999


Q ss_pred             CCCCC--CCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchh
Q 043792          107 EPPSD--HSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWH  184 (294)
Q Consensus       107 ~~~~~--~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y  184 (294)
                      +....  ........++.|+.++.++++++++. ++++||++||..  .|+...    ..+++|+.+..+.      ++|
T Consensus        74 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~sS~~--~y~~~~----~~~~~e~~~~~~~------~~Y  140 (236)
T PF01370_consen   74 AFSSNPESFEDPEEIIEANVQGTRNLLEAAREA-GVKRFIFLSSAS--VYGDPD----GEPIDEDSPINPL------SPY  140 (236)
T ss_dssp             SSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TTSEEEEEEEGG--GGTSSS----SSSBETTSGCCHS------SHH
T ss_pred             ccccccccccccccccccccccccccccccccc-cccccccccccc--cccccc----ccccccccccccc------ccc
Confidence            98641  11233488999999999999999999 889999999975  666554    4478999888666      889


Q ss_pred             HhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCC---CCCCCc-------cccccc-cccCCCc--cccccHHHHHHHHH
Q 043792          185 GLSKTLAEKTAWALAMDRGISMVSINGGLVMGPD---VTISNP-------YLKGAA-EMYEDGV--MASVDLRFYVDAHI  251 (294)
Q Consensus       185 ~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~---~~~~~~-------~~~~~~-~~~~~~~--~~~v~v~D~a~~i~  251 (294)
                      +.+|..+|++++.+.++++++++++||+++|||.   ......       +.++++ ..++++.  ..|+|++|+|++++
T Consensus       141 ~~~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  220 (236)
T PF01370_consen  141 GASKRAAEELLRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIV  220 (236)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHH
Confidence            9999999999999999899999999999999999   111111       445664 5555544  44999999999999


Q ss_pred             hhhcCcC-CCCeEEe
Q 043792          252 CVFEDVS-SYGRYLC  265 (294)
Q Consensus       252 ~~~~~~~-~~~~~~~  265 (294)
                      .+++++. .++.|++
T Consensus       221 ~~~~~~~~~~~~yNi  235 (236)
T PF01370_consen  221 AALENPKAAGGIYNI  235 (236)
T ss_dssp             HHHHHSCTTTEEEEE
T ss_pred             HHHhCCCCCCCEEEe
Confidence            9999888 4556876

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=100.00  E-value=3.2e-33  Score=240.31  Aligned_cols=230  Identities=14%  Similarity=0.146  Sum_probs=170.0

Q ss_pred             EEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCCh---hHH-HHHhc-----cC
Q 043792           29 VCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDY---HSL-VNALK-----GC   99 (294)
Q Consensus        29 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~---~~~-~~~~~-----~~   99 (294)
                      ||||||+||||++|+++|+++|++++++.|+........            .+..+|+.|.   +.+ ..++.     ++
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~~------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   69 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFV------------NLVDLDIADYMDKEDFLAQIMAGDDFGDI   69 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHHH------------hhhhhhhhhhhhHHHHHHHHhcccccCCc
Confidence            899999999999999999999998887776654321111            1122345443   333 33332     68


Q ss_pred             CEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhh
Q 043792          100 SGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKK  179 (294)
Q Consensus       100 d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~  179 (294)
                      |+|||+|+............++.|+.++.+++++|++. ++ +|||+||.+  +|+...    ..+.+|+.+..|.    
T Consensus        70 d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-~~-~~i~~SS~~--vyg~~~----~~~~~E~~~~~p~----  137 (308)
T PRK11150         70 EAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAA--TYGGRT----DDFIEEREYEKPL----  137 (308)
T ss_pred             cEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEcchH--HhCcCC----CCCCccCCCCCCC----
Confidence            99999998654333333467899999999999999998 77 699999986  555433    2356777766666    


Q ss_pred             ccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-----------cccccc-ccc-CCCc--cccccHH
Q 043792          180 FKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-----------YLKGAA-EMY-EDGV--MASVDLR  244 (294)
Q Consensus       180 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-----------~~~~~~-~~~-~~~~--~~~v~v~  244 (294)
                        +.|+.+|.++|++++.+..+.+++++++||+++|||+......           +.++.. .++ +++.  ..|+|++
T Consensus       138 --~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~  215 (308)
T PRK11150        138 --NVYGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVG  215 (308)
T ss_pred             --CHHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHH
Confidence              7899999999999999988889999999999999998543211           233433 233 3332  4599999


Q ss_pred             HHHHHHHhhhcCcCCCCeEEee-cccccHHHHHHHHHHHhCC
Q 043792          245 FYVDAHICVFEDVSSYGRYLCF-NHVINCNEDAMKLARMLLP  285 (294)
Q Consensus       245 D~a~~i~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~  285 (294)
                      |+|++++.+++... ++.|+++ +..+++.|+++.+.+.++.
T Consensus       216 D~a~a~~~~~~~~~-~~~yni~~~~~~s~~el~~~i~~~~~~  256 (308)
T PRK11150        216 DVAAVNLWFWENGV-SGIFNCGTGRAESFQAVADAVLAYHKK  256 (308)
T ss_pred             HHHHHHHHHHhcCC-CCeEEcCCCCceeHHHHHHHHHHHhCC
Confidence            99999999987643 4578775 4569999999999998874

>CHL00194 ycf39 Ycf39; Provisional

Probab=100.00  E-value=6.9e-33  Score=238.92  Aligned_cols=226  Identities=15%  Similarity=0.116  Sum_probs=173.3

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEecC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSF  106 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~a  106 (294)
                      |+|+|||||||||++|+++|+++||+|++++|+.++...+..        .+++++.+|++|++++.++++++|+|||++
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~--------~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~   72 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKE--------WGAELVYGDLSLPETLPPSFKGVTAIIDAS   72 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhh--------cCCEEEECCCCCHHHHHHHHCCCCEEEECC
Confidence            589999999999999999999999999999998654433332        378999999999999999999999999997


Q ss_pred             CCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHh
Q 043792          107 EPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGL  186 (294)
Q Consensus       107 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~  186 (294)
                      +...   .......++|+.++.+++++|++. +++|||++||.++..++  .                       .+|..
T Consensus        73 ~~~~---~~~~~~~~~~~~~~~~l~~aa~~~-gvkr~I~~Ss~~~~~~~--~-----------------------~~~~~  123 (317)
T CHL00194         73 TSRP---SDLYNAKQIDWDGKLALIEAAKAA-KIKRFIFFSILNAEQYP--Y-----------------------IPLMK  123 (317)
T ss_pred             CCCC---CCccchhhhhHHHHHHHHHHHHHc-CCCEEEEeccccccccC--C-----------------------ChHHH
Confidence            6432   122356788999999999999999 99999999986422211  1                       56889


Q ss_pred             hHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCC-CCcccccccccc--CCCccccccHHHHHHHHHhhhcCcCCCC-e
Q 043792          187 SKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTI-SNPYLKGAAEMY--EDGVMASVDLRFYVDAHICVFEDVSSYG-R  262 (294)
Q Consensus       187 sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~-~~~~~~~~~~~~--~~~~~~~v~v~D~a~~i~~~~~~~~~~~-~  262 (294)
                      +|..+|.+++.    .+++++++||+.+|+..... ......+.+...  ++....|||++|+|++++.+++++...+ .
T Consensus       124 ~K~~~e~~l~~----~~l~~tilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~  199 (317)
T CHL00194        124 LKSDIEQKLKK----SGIPYTIFRLAGFFQGLISQYAIPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPETKNKT  199 (317)
T ss_pred             HHHHHHHHHHH----cCCCeEEEeecHHhhhhhhhhhhhhccCCceEecCCCCccCccCHHHHHHHHHHHhcCccccCcE
Confidence            99999987754    68999999999998653111 111222333211  2233459999999999999998765444 5


Q ss_pred             EEee-cccccHHHHHHHHHHHhCCCCCCCCCC
Q 043792          263 YLCF-NHVINCNEDAMKLARMLLPPSDTSTPP  293 (294)
Q Consensus       263 ~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~p  293 (294)
                      |+++ ++.+|++|+++.+.+.+|.+..+...|
T Consensus       200 ~ni~g~~~~s~~el~~~~~~~~g~~~~~~~vp  231 (317)
T CHL00194        200 FPLVGPKSWNSSEIISLCEQLSGQKAKISRVP  231 (317)
T ss_pred             EEecCCCccCHHHHHHHHHHHhCCCCeEEeCC
Confidence            8765 467999999999999999876654443

>PLN02240 UDP-glucose 4-epimerase

Probab=100.00  E-value=5.9e-32  Score=236.75  Aligned_cols=251  Identities=17%  Similarity=0.108  Sum_probs=188.0

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChh----hHHHHHhhc-cCCCCeEEEECCCCChhHHHHHhc
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQ----CIEEELINY-NEEKKLKVFQADPFDYHSLVNALK   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~l~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~   97 (294)
                      ++++++|+|||||||||++|++.|+++|++|++++|......    .+..   .. ....+++++.+|++|++++.++++
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~D~~~~~~l~~~~~   78 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKE---LAGDLGDNLVFHKVDLRDKEALEKVFA   78 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHH---hhcccCccceEEecCcCCHHHHHHHHH
Confidence            445689999999999999999999999999999987643321    1111   11 112468899999999999999886


Q ss_pred             --cCCEEEecCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSD  173 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~  173 (294)
                        ++|+|||+|+.....  .......+++|+.++.+++++|.+. ++++||++||++  +|+...    ..+++|+.+..
T Consensus        79 ~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~--vyg~~~----~~~~~E~~~~~  151 (352)
T PLN02240         79 STRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKH-GCKKLVFSSSAT--VYGQPE----EVPCTEEFPLS  151 (352)
T ss_pred             hCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEccHH--HhCCCC----CCCCCCCCCCC
Confidence              689999999865322  2233478999999999999999988 889999999975  455433    44788988777


Q ss_pred             hhhhhhccchhHhhHHHHHHHHHHHHHh-cCCeEEEEecCceeCCCCCC-------C--Cc-------cccccc---ccc
Q 043792          174 VNLCKKFKLWHGLSKTLAEKTAWALAMD-RGISMVSINGGLVMGPDVTI-------S--NP-------YLKGAA---EMY  233 (294)
Q Consensus       174 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~~~~~~ilrp~~i~G~~~~~-------~--~~-------~~~~~~---~~~  233 (294)
                      +.      +.|+.+|.++|.+++.++.. .+++++++|++++||++...       .  ..       +..+..   ..+
T Consensus       152 ~~------~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (352)
T PLN02240        152 AT------NPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVF  225 (352)
T ss_pred             CC------CHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEe
Confidence            66      88999999999999988754 57999999999999975311       0  00       111221   222


Q ss_pred             C------CCc--cccccHHHHHHHHHhhhcC----cCCC-CeEEee-cccccHHHHHHHHHHHhCCCCCC
Q 043792          234 E------DGV--MASVDLRFYVDAHICVFED----VSSY-GRYLCF-NHVINCNEDAMKLARMLLPPSDT  289 (294)
Q Consensus       234 ~------~~~--~~~v~v~D~a~~i~~~~~~----~~~~-~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~  289 (294)
                      +      ++.  +.|||++|+|++++.+++.    +... +.|+++ ++++|++|+++.+.+.++.+.++
T Consensus       226 g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~  295 (352)
T PLN02240        226 GNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIPL  295 (352)
T ss_pred             CCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCCc
Confidence            2      333  3499999999999888853    2233 358764 67799999999999999866544

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=100.00  E-value=8.5e-33  Score=236.27  Aligned_cols=219  Identities=12%  Similarity=0.045  Sum_probs=168.1

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCCEEEe
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCSGLFY  104 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~Vih  104 (294)
                      ||||||||+||||++|+++|+++| +|++++|...                   .+.+|++|.+.+.++++  ++|+|||
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-------------------~~~~Dl~d~~~~~~~~~~~~~D~Vih   60 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST-------------------DYCGDFSNPEGVAETVRKIRPDVIVN   60 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-------------------cccCCCCCHHHHHHHHHhcCCCEEEE
Confidence            589999999999999999999999 7988887531                   23579999999999988  4899999


Q ss_pred             cCCCCCCCC--cchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccc
Q 043792          105 SFEPPSDHS--TYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL  182 (294)
Q Consensus       105 ~a~~~~~~~--~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  182 (294)
                      ||+......  .+++..+.+|+.++.+++++|++. ++ +|||+||..  +|+...    ..+++|+++..|.      +
T Consensus        61 ~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~-g~-~~v~~Ss~~--Vy~~~~----~~p~~E~~~~~P~------~  126 (299)
T PRK09987         61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEV-GA-WVVHYSTDY--VFPGTG----DIPWQETDATAPL------N  126 (299)
T ss_pred             CCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEccce--EECCCC----CCCcCCCCCCCCC------C
Confidence            998765432  233466789999999999999998 75 799999985  565544    4478999887777      8


Q ss_pred             hhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-----cccccc-cccCC--Ccc--ccccHHHHHHHHHh
Q 043792          183 WHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-----YLKGAA-EMYED--GVM--ASVDLRFYVDAHIC  252 (294)
Q Consensus       183 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-----~~~~~~-~~~~~--~~~--~~v~v~D~a~~i~~  252 (294)
                      .|+.+|.++|+++..+.    .+++++|++++|||.....-.     +.++++ .++++  +..  .+.+++|+++++..
T Consensus       127 ~Yg~sK~~~E~~~~~~~----~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~  202 (299)
T PRK09987        127 VYGETKLAGEKALQEHC----AKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRV  202 (299)
T ss_pred             HHHHHHHHHHHHHHHhC----CCEEEEecceecCCCCCCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHH
Confidence            89999999999998754    457999999999997421101     223433 45555  222  25667778888887


Q ss_pred             hhcCcCCCCeEEee-cccccHHHHHHHHHHHh
Q 043792          253 VFEDVSSYGRYLCF-NHVINCNEDAMKLARML  283 (294)
Q Consensus       253 ~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~  283 (294)
                      ++......+.|+++ ++.+|+.|+++.+.+..
T Consensus       203 ~~~~~~~~giyni~~~~~~s~~e~~~~i~~~~  234 (299)
T PRK09987        203 ALNKPEVAGLYHLVASGTTTWHDYAALVFEEA  234 (299)
T ss_pred             hhccCCCCCeEEeeCCCCccHHHHHHHHHHHH
Confidence            77654445678765 56799999999997753

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=4.4e-32  Score=234.01  Aligned_cols=243  Identities=14%  Similarity=0.061  Sum_probs=186.0

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCC--ChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc--CCE
Q 043792           28 TVCVMDASGHFASALVRRLLLRG--YTVHAALHNHG--KLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG--CSG  101 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~--~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~  101 (294)
                      +|+|||||||||++++++|+++|  ++|++++|...  ..+.+..   . ....+++++.+|++|++++.+++++  +|+
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~   76 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLAD---L-EDNPRYRFVKGDIGDRELVSRLFTEHQPDA   76 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhh---h-ccCCCcEEEEcCCcCHHHHHHHHhhcCCCE
Confidence            59999999999999999999987  78998876432  1222222   1 1124688999999999999999987  899


Q ss_pred             EEecCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCCc-EEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhh
Q 043792          102 LFYSFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTVD-KVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCK  178 (294)
Q Consensus       102 Vih~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~  178 (294)
                      |||+|+.....  .......+++|+.++.+++++|.+. +.+ ++|++||..  +|+...  . ..+++|+.+..+.   
T Consensus        77 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~i~~Ss~~--v~g~~~--~-~~~~~e~~~~~~~---  147 (317)
T TIGR01181        77 VVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKY-WHEFRFHHISTDE--VYGDLE--K-GDAFTETTPLAPS---  147 (317)
T ss_pred             EEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhc-CCCceEEEeeccc--eeCCCC--C-CCCcCCCCCCCCC---
Confidence            99999875432  2233477899999999999999886 433 899999985  455432  0 2257787776665   


Q ss_pred             hccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-------cccccc-cccCCCc--cccccHHHHHH
Q 043792          179 KFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-------YLKGAA-EMYEDGV--MASVDLRFYVD  248 (294)
Q Consensus       179 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-------~~~~~~-~~~~~~~--~~~v~v~D~a~  248 (294)
                         +.|+.+|..+|.+++.++.+.+++++++||+.+|||.......       +..+.+ ..++++.  ..|+|++|+|+
T Consensus       148 ---~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~  224 (317)
T TIGR01181       148 ---SPYSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCR  224 (317)
T ss_pred             ---CchHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHH
Confidence               7899999999999999988889999999999999998543221       233433 4455543  45999999999


Q ss_pred             HHHhhhcCcCCCCeEEee-cccccHHHHHHHHHHHhCCC
Q 043792          249 AHICVFEDVSSYGRYLCF-NHVINCNEDAMKLARMLLPP  286 (294)
Q Consensus       249 ~i~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~  286 (294)
                      ++..++++...++.|+++ ++++++.|+++.+.+.++.+
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~~~  263 (317)
T TIGR01181       225 AIYLVLEKGRVGETYNIGGGNERTNLEVVETILELLGKD  263 (317)
T ss_pred             HHHHHHcCCCCCceEEeCCCCceeHHHHHHHHHHHhCCC
Confidence            999999876555568775 46799999999999999854

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=100.00  E-value=7.7e-32  Score=234.72  Aligned_cols=249  Identities=15%  Similarity=0.072  Sum_probs=183.4

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCCEEEe
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCSGLFY  104 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~Vih  104 (294)
                      |+||||||+||||++|++.|+++|++|++++|...........+ ......++.++.+|++|.+.+.++++  ++|+|||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh   79 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVI-ERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIH   79 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHH-HHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEE
Confidence            58999999999999999999999999999987533222111100 00112357788999999999998886  5899999


Q ss_pred             cCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCC-Chhhhhhcc
Q 043792          105 SFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWS-DVNLCKKFK  181 (294)
Q Consensus       105 ~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~~~  181 (294)
                      +|+.....  .......+++|+.++.+++++|++. ++++||++||.+  +|+...    ..+++|+.+. .+.      
T Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~--~yg~~~----~~~~~E~~~~~~p~------  146 (338)
T PRK10675         80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNLIFSSSAT--VYGDQP----KIPYVESFPTGTPQ------  146 (338)
T ss_pred             CCccccccchhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHH--hhCCCC----CCccccccCCCCCC------
Confidence            99865422  1223477899999999999999998 889999999985  455433    4478888775 444      


Q ss_pred             chhHhhHHHHHHHHHHHHHhc-CCeEEEEecCceeCCCCCC-----C----Cc-------ccccc-c--cccC------C
Q 043792          182 LWHGLSKTLAEKTAWALAMDR-GISMVSINGGLVMGPDVTI-----S----NP-------YLKGA-A--EMYE------D  235 (294)
Q Consensus       182 ~~Y~~sK~~~e~~~~~~~~~~-~~~~~ilrp~~i~G~~~~~-----~----~~-------~~~~~-~--~~~~------~  235 (294)
                      +.|+.+|.++|++++.++.+. +++++++|++++||+....     .    ..       +..+. .  .+++      +
T Consensus       147 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (338)
T PRK10675        147 SPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTED  226 (338)
T ss_pred             ChhHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCC
Confidence            789999999999999987654 7999999999999974210     0    00       11121 1  1221      3


Q ss_pred             Cc--cccccHHHHHHHHHhhhcCc--CCC-CeEEee-cccccHHHHHHHHHHHhCCCCCC
Q 043792          236 GV--MASVDLRFYVDAHICVFEDV--SSY-GRYLCF-NHVINCNEDAMKLARMLLPPSDT  289 (294)
Q Consensus       236 ~~--~~~v~v~D~a~~i~~~~~~~--~~~-~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~  289 (294)
                      +.  ..|+|++|+|++++.+++..  ... +.|+++ ++.+++.|+++.+.+.+|.+.++
T Consensus       227 g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~  286 (338)
T PRK10675        227 GTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNY  286 (338)
T ss_pred             CcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCCCe
Confidence            33  45999999999999998752  223 358775 56799999999999999876554

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=100.00  E-value=1.6e-31  Score=230.90  Aligned_cols=229  Identities=18%  Similarity=0.113  Sum_probs=173.5

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ++|+||||||+||||+++++.|+++|  ++|++++|+......+...  .  ...++.++.+|++|.+.+.++++++|+|
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~--~--~~~~~~~v~~Dl~d~~~l~~~~~~iD~V   78 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQK--F--PAPCLRFFIGDVRDKERLTRALRGVDYV   78 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHH--h--CCCcEEEEEccCCCHHHHHHHHhcCCEE
Confidence            46899999999999999999999986  7899999876544333331  1  1246889999999999999999999999


Q ss_pred             EecCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhc
Q 043792          103 FYSFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKF  180 (294)
Q Consensus       103 ih~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~  180 (294)
                      ||+|+.....  ..++...+++|+.++.++++++.+. ++++||++||....                    .|.     
T Consensus        79 ih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~-~~~~iV~~SS~~~~--------------------~p~-----  132 (324)
T TIGR03589        79 VHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDN-GVKRVVALSTDKAA--------------------NPI-----  132 (324)
T ss_pred             EECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeCCCCC--------------------CCC-----
Confidence            9999875432  2233478999999999999999998 88899999996310                    011     


Q ss_pred             cchhHhhHHHHHHHHHHHH---HhcCCeEEEEecCceeCCCCCCCCc----ccccc-ccccCCCcc--ccccHHHHHHHH
Q 043792          181 KLWHGLSKTLAEKTAWALA---MDRGISMVSINGGLVMGPDVTISNP----YLKGA-AEMYEDGVM--ASVDLRFYVDAH  250 (294)
Q Consensus       181 ~~~Y~~sK~~~e~~~~~~~---~~~~~~~~ilrp~~i~G~~~~~~~~----~~~~~-~~~~~~~~~--~~v~v~D~a~~i  250 (294)
                       ++|+.+|.++|.+++.++   .++|++++++||+++|||.......    ...+. .....++.+  .|+|++|+++++
T Consensus       133 -~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~  211 (324)
T TIGR03589       133 -NLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGSVVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFV  211 (324)
T ss_pred             -CHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCCCcHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHH
Confidence             679999999999998754   3568999999999999987321111    22343 212223333  399999999999


Q ss_pred             HhhhcCcCCCCeEEeecccccHHHHHHHHHHHhC
Q 043792          251 ICVFEDVSSYGRYLCFNHVINCNEDAMKLARMLL  284 (294)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  284 (294)
                      +.+++....+..|+..+..+++.|+++.+.+...
T Consensus       212 ~~al~~~~~~~~~~~~~~~~sv~el~~~i~~~~~  245 (324)
T TIGR03589       212 LKSLERMLGGEIFVPKIPSMKITDLAEAMAPECP  245 (324)
T ss_pred             HHHHhhCCCCCEEccCCCcEEHHHHHHHHHhhCC
Confidence            9999864333346555567999999999998653

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=100.00  E-value=2e-31  Score=226.98  Aligned_cols=219  Identities=16%  Similarity=0.147  Sum_probs=173.9

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccC--CEEEec
Q 043792           28 TVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGC--SGLFYS  105 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~--d~Vih~  105 (294)
                      ||||||||||||+++++.|+++|++|++++|+                       .+|+.+.+.+.++++++  |+|||+
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-----------------------~~d~~~~~~~~~~~~~~~~d~vi~~   57 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS-----------------------QLDLTDPEALERLLRAIRPDAVVNT   57 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-----------------------ccCCCCHHHHHHHHHhCCCCEEEEC
Confidence            58999999999999999999999999998875                       24889999999999865  999999


Q ss_pred             CCCCCCCC--cchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccch
Q 043792          106 FEPPSDHS--TYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLW  183 (294)
Q Consensus       106 a~~~~~~~--~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  183 (294)
                      ++......  ......+++|+.++.++++++.+. +. +||++||.+  +|+...    ..+++|+++..+.      +.
T Consensus        58 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~Ss~~--vy~~~~----~~~~~E~~~~~~~------~~  123 (287)
T TIGR01214        58 AAYTDVDGAESDPEKAFAVNALAPQNLARAAARH-GA-RLVHISTDY--VFDGEG----KRPYREDDATNPL------NV  123 (287)
T ss_pred             CccccccccccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEeeee--eecCCC----CCCCCCCCCCCCc------ch
Confidence            98754321  233477899999999999999888 64 899999975  555433    3478888876665      88


Q ss_pred             hHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCC--c----cccccc-cccCCCccccccHHHHHHHHHhhhcC
Q 043792          184 HGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISN--P----YLKGAA-EMYEDGVMASVDLRFYVDAHICVFED  256 (294)
Q Consensus       184 Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~--~----~~~~~~-~~~~~~~~~~v~v~D~a~~i~~~~~~  256 (294)
                      |+.+|..+|++++.+    +.+++++||+++||+......  .    +.++.. ...++....|+|++|+|+++..+++.
T Consensus       124 Y~~~K~~~E~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~  199 (287)
T TIGR01214       124 YGQSKLAGEQAIRAA----GPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQR  199 (287)
T ss_pred             hhHHHHHHHHHHHHh----CCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhh
Confidence            999999999999875    689999999999999842111  0    222332 33455555699999999999999987


Q ss_pred             c-CCCCeEEee-cccccHHHHHHHHHHHhCCCC
Q 043792          257 V-SSYGRYLCF-NHVINCNEDAMKLARMLLPPS  287 (294)
Q Consensus       257 ~-~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~  287 (294)
                      + ..++.|+++ ++.+++.|+++.+++.++.+.
T Consensus       200 ~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~  232 (287)
T TIGR01214       200 LARARGVYHLANSGQCSWYEFAQAIFEEAGADG  232 (287)
T ss_pred             ccCCCCeEEEECCCCcCHHHHHHHHHHHhCccc
Confidence            6 345667665 567999999999999998764

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=1.8e-31  Score=218.45  Aligned_cols=255  Identities=19%  Similarity=0.137  Sum_probs=199.3

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC-ChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCCEE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG-KLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCSGL  102 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~V  102 (294)
                      .++||||||.||||+|.+-+|+++|+.|++++.-.. ....+..-........++.++++|+.|.+.++++|+  ++|.|
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V   81 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAV   81 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceE
Confidence            478999999999999999999999999999986322 233332211133445789999999999999999998  47999


Q ss_pred             EecCCCCCCCCc--chhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCC-hhhhhh
Q 043792          103 FYSFEPPSDHST--YDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSD-VNLCKK  179 (294)
Q Consensus       103 ih~a~~~~~~~~--~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~-~~~~~~  179 (294)
                      +|+|+......+  .+-..+..|+.|+.++++++++. +++.+||.||++  +||...    ..|++|+.+.. |.    
T Consensus        82 ~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~-~~~~~V~sssat--vYG~p~----~ip~te~~~t~~p~----  150 (343)
T KOG1371|consen   82 MHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAH-NVKALVFSSSAT--VYGLPT----KVPITEEDPTDQPT----  150 (343)
T ss_pred             EeehhhhccchhhhCchhheehhhhhHHHHHHHHHHc-CCceEEEeccee--eecCcc----eeeccCcCCCCCCC----
Confidence            999987665433  33478899999999999999999 799999999985  777766    78999999887 66    


Q ss_pred             ccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeC--CCCCCCCc-------cc----------------cccc--cc
Q 043792          180 FKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMG--PDVTISNP-------YL----------------KGAA--EM  232 (294)
Q Consensus       180 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G--~~~~~~~~-------~~----------------~~~~--~~  232 (294)
                        ++||.+|.+.|..+..+...+++.++.||.++++|  |.......       +.                -|..  ..
T Consensus       151 --~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~  228 (343)
T KOG1371|consen  151 --NPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTI  228 (343)
T ss_pred             --CcchhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCccccc
Confidence              89999999999999999998899999999999999  43322221       11                0111  11


Q ss_pred             cCCCccccccHHHHHHHHHhhhcCcCCC---CeEEee-cccccHHHHHHHHHHHhCCCCCCCCCC
Q 043792          233 YEDGVMASVDLRFYVDAHICVFEDVSSY---GRYLCF-NHVINCNEDAMKLARMLLPPSDTSTPP  293 (294)
Q Consensus       233 ~~~~~~~~v~v~D~a~~i~~~~~~~~~~---~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~p  293 (294)
                      .++....++|+-|.|+....++.....-   +.|+.. +...+..+++..+++..|.++++...|
T Consensus       229 dgt~vrdyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~~v~  293 (343)
T KOG1371|consen  229 DGTIVRDYIHVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKKVVP  293 (343)
T ss_pred             CCCeeecceeeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCccccC
Confidence            1233344999999999999999875442   247665 456889999999999999998876544

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=100.00  E-value=1.7e-31  Score=229.44  Aligned_cols=228  Identities=16%  Similarity=0.132  Sum_probs=173.3

Q ss_pred             EEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCCEEEecCC
Q 043792           30 CVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCSGLFYSFE  107 (294)
Q Consensus        30 lItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~Vih~a~  107 (294)
                      ||||||||||++|++.|+++|++|+++.+..                      .+|++|.+++.++++  ++|+|||||+
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~~----------------------~~Dl~~~~~l~~~~~~~~~d~Vih~A~   58 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTHK----------------------ELDLTRQADVEAFFAKEKPTYVILAAA   58 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeeccc----------------------cCCCCCHHHHHHHHhccCCCEEEEeee
Confidence            6999999999999999999999988654321                      369999999999887  4799999998


Q ss_pred             CCCC---CCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchh
Q 043792          108 PPSD---HSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWH  184 (294)
Q Consensus       108 ~~~~---~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y  184 (294)
                      ....   ...++...++.|+.++.+++++|++. ++++||++||..  +|+...    ..+++|+++..... ......|
T Consensus        59 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~SS~~--vyg~~~----~~~~~E~~~~~~~~-~p~~~~Y  130 (306)
T PLN02725         59 KVGGIHANMTYPADFIRENLQIQTNVIDAAYRH-GVKKLLFLGSSC--IYPKFA----PQPIPETALLTGPP-EPTNEWY  130 (306)
T ss_pred             eecccchhhhCcHHHHHHHhHHHHHHHHHHHHc-CCCeEEEeCcee--ecCCCC----CCCCCHHHhccCCC-CCCcchH
Confidence            7432   22334477899999999999999998 899999999985  566443    44788876432110 0000359


Q ss_pred             HhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCC---Cc----c--------ccccc-cc-cCCCc--cccccHHH
Q 043792          185 GLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTIS---NP----Y--------LKGAA-EM-YEDGV--MASVDLRF  245 (294)
Q Consensus       185 ~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~---~~----~--------~~~~~-~~-~~~~~--~~~v~v~D  245 (294)
                      +.+|.++|++++.+..+.+++++++||+.+|||.....   ..    +        ..+.+ .. ++++.  ..|+|++|
T Consensus       131 ~~sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D  210 (306)
T PLN02725        131 AIAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDD  210 (306)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHH
Confidence            99999999999999888899999999999999985321   00    1        22333 22 44444  35999999


Q ss_pred             HHHHHHhhhcCcCCCCeEEee-cccccHHHHHHHHHHHhCCCC
Q 043792          246 YVDAHICVFEDVSSYGRYLCF-NHVINCNEDAMKLARMLLPPS  287 (294)
Q Consensus       246 ~a~~i~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~  287 (294)
                      ++++++.+++.....+.|+++ ++.+++.|+++.+.+.++.+.
T Consensus       211 v~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~  253 (306)
T PLN02725        211 LADAVVFLMRRYSGAEHVNVGSGDEVTIKELAELVKEVVGFEG  253 (306)
T ss_pred             HHHHHHHHHhccccCcceEeCCCCcccHHHHHHHHHHHhCCCC
Confidence            999999999865444567665 567999999999999888654

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=4.7e-32  Score=216.86  Aligned_cols=244  Identities=15%  Similarity=0.148  Sum_probs=195.2

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHC--CCeEEEEecC--CCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCC
Q 043792           27 KTVCVMDASGHFASALVRRLLLR--GYTVHAALHN--HGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCS  100 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~--~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d  100 (294)
                      ++++||||.||||++.++.+...  .++.+.++.-  .+....+.+    ....++.+++.+|+.+...+...+.  ++|
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~----~~n~p~ykfv~~di~~~~~~~~~~~~~~id   82 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEP----VRNSPNYKFVEGDIADADLVLYLFETEEID   82 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhh----hccCCCceEeeccccchHHHHhhhccCchh
Confidence            79999999999999999999986  4566655541  112333333    2345689999999999888877774  689


Q ss_pred             EEEecCCCCCCCCcch--hhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCC-CCCCCChhhh
Q 043792          101 GLFYSFEPPSDHSTYD--ELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFD-ERNWSDVNLC  177 (294)
Q Consensus       101 ~Vih~a~~~~~~~~~~--~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~-e~~~~~~~~~  177 (294)
                      .|||.|+..+...++-  -.....|+.++..|+++++..+++++|||+||..  +||+..    +.... |...++|.  
T Consensus        83 ~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTde--VYGds~----~~~~~~E~s~~nPt--  154 (331)
T KOG0747|consen   83 TVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDE--VYGDSD----EDAVVGEASLLNPT--  154 (331)
T ss_pred             hhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccc--eecCcc----ccccccccccCCCC--
Confidence            9999999877654432  2778899999999999999998899999999995  777766    44555 88888888  


Q ss_pred             hhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-------cccccc-cccCCCccc--cccHHHHH
Q 043792          178 KKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-------YLKGAA-EMYEDGVMA--SVDLRFYV  247 (294)
Q Consensus       178 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-------~~~~~~-~~~~~~~~~--~v~v~D~a  247 (294)
                          ++|+++|.++|..++.|..+++++++++|.++||||++.....       ...+.+ +..++|.+.  |+|++|++
T Consensus       155 ----npyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~  230 (331)
T KOG0747|consen  155 ----NPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVS  230 (331)
T ss_pred             ----CchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHH
Confidence                9999999999999999999999999999999999999654432       223444 677887766  99999999


Q ss_pred             HHHHhhhcCcCCCCeEEee-cccccHHHHHHHHHHHhCCC
Q 043792          248 DAHICVFEDVSSYGRYLCF-NHVINCNEDAMKLARMLLPP  286 (294)
Q Consensus       248 ~~i~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~  286 (294)
                      +++..+++.+..+..|+++ +.+.+..|+++.+.+.+...
T Consensus       231 ea~~~v~~Kg~~geIYNIgtd~e~~~~~l~k~i~eli~~~  270 (331)
T KOG0747|consen  231 EAFKAVLEKGELGEIYNIGTDDEMRVIDLAKDICELFEKR  270 (331)
T ss_pred             HHHHHHHhcCCccceeeccCcchhhHHHHHHHHHHHHHHh
Confidence            9999999985555568665 56789999999888877653

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=100.00  E-value=3.2e-31  Score=233.74  Aligned_cols=235  Identities=18%  Similarity=0.118  Sum_probs=179.2

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhh---HHHHHhhccCCCCeEEEECCCCChhHHHHHhc--
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQC---IEEELINYNEEKKLKVFQADPFDYHSLVNALK--   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--   97 (294)
                      ...+++|+|||||||||++++++|+++|++|++++|+.+....   ...   ......+++++.+|++|++.+.++++  
T Consensus        57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~---~~~~~~~v~~v~~Dl~d~~~l~~~~~~~  133 (390)
T PLN02657         57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKED---TKKELPGAEVVFGDVTDADSLRKVLFSE  133 (390)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhH---HhhhcCCceEEEeeCCCHHHHHHHHHHh
Confidence            4567899999999999999999999999999999998654321   111   11122478999999999999999988  


Q ss_pred             --cCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChh
Q 043792           98 --GCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVN  175 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~  175 (294)
                        ++|+||||++......   ...+++|+.++.++++++++. ++++||++||.+  .++. .                 
T Consensus       134 ~~~~D~Vi~~aa~~~~~~---~~~~~vn~~~~~~ll~aa~~~-gv~r~V~iSS~~--v~~p-~-----------------  189 (390)
T PLN02657        134 GDPVDVVVSCLASRTGGV---KDSWKIDYQATKNSLDAGREV-GAKHFVLLSAIC--VQKP-L-----------------  189 (390)
T ss_pred             CCCCcEEEECCccCCCCC---ccchhhHHHHHHHHHHHHHHc-CCCEEEEEeecc--ccCc-c-----------------
Confidence              5899999987543211   244678999999999999998 899999999975  2211 1                 


Q ss_pred             hhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCccccccc-cccCCCcc---ccccHHHHHHHHH
Q 043792          176 LCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAA-EMYEDGVM---ASVDLRFYVDAHI  251 (294)
Q Consensus       176 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~~~~~~~-~~~~~~~~---~~v~v~D~a~~i~  251 (294)
                            ..|..+|...|..++.  .+.+++++++||+.+||+.......+.+|.+ .+++++..   .+||++|+|++++
T Consensus       190 ------~~~~~sK~~~E~~l~~--~~~gl~~tIlRp~~~~~~~~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~  261 (390)
T PLN02657        190 ------LEFQRAKLKFEAELQA--LDSDFTYSIVRPTAFFKSLGGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIA  261 (390)
T ss_pred             ------hHHHHHHHHHHHHHHh--ccCCCCEEEEccHHHhcccHHHHHhhccCCceEEecCCcccccCceeHHHHHHHHH
Confidence                  4688999999998875  3468999999999999864221121445555 45677664   2799999999999


Q ss_pred             hhhcCcCCCC-eEEeec--ccccHHHHHHHHHHHhCCCCCCCCC
Q 043792          252 CVFEDVSSYG-RYLCFN--HVINCNEDAMKLARMLLPPSDTSTP  292 (294)
Q Consensus       252 ~~~~~~~~~~-~~~~~~--~~~s~~~~~~~~~~~~~~~~~~~~~  292 (294)
                      .++.++...+ .|++.+  +.+|++|+++.+.+.+|.+.++...
T Consensus       262 ~~~~~~~~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~~~~~~~v  305 (390)
T PLN02657        262 DCVLDESKINKVLPIGGPGKALTPLEQGEMLFRILGKEPKFFKV  305 (390)
T ss_pred             HHHhCccccCCEEEcCCCCcccCHHHHHHHHHHHhCCCCceEEc
Confidence            9987655444 477764  4799999999999999987665433

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=100.00  E-value=7.2e-31  Score=226.31  Aligned_cols=234  Identities=18%  Similarity=0.130  Sum_probs=173.0

Q ss_pred             EEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----cCCEEE
Q 043792           29 VCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----GCSGLF  103 (294)
Q Consensus        29 vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----~~d~Vi  103 (294)
                      |||||||||||+++++.|+++|+ +|++++|..... .+..   .     ....+..|+.+.+.++.+.+    ++|+||
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~~---~-----~~~~~~~d~~~~~~~~~~~~~~~~~~D~vv   71 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFLN---L-----ADLVIADYIDKEDFLDRLEKGAFGKIEAIF   71 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhhh---h-----hheeeeccCcchhHHHHHHhhccCCCCEEE
Confidence            69999999999999999999997 788887754322 2221   1     12356778888877776654    799999


Q ss_pred             ecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCC-Chhhhhhccc
Q 043792          104 YSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWS-DVNLCKKFKL  182 (294)
Q Consensus       104 h~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~~~~  182 (294)
                      |+|+.......+....+++|+.++.+++++|.+. ++ +||++||.+  +|+...    . +++|+++. .+.      +
T Consensus        72 h~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~-~~v~~SS~~--vy~~~~----~-~~~e~~~~~~p~------~  136 (314)
T TIGR02197        72 HQGACSDTTETDGEYMMENNYQYSKRLLDWCAEK-GI-PFIYASSAA--TYGDGE----A-GFREGRELERPL------N  136 (314)
T ss_pred             ECccccCccccchHHHHHHHHHHHHHHHHHHHHh-CC-cEEEEccHH--hcCCCC----C-CcccccCcCCCC------C
Confidence            9999765444445578899999999999999988 76 799999985  555433    2 45555432 233      7


Q ss_pred             hhHhhHHHHHHHHHHHHHh--cCCeEEEEecCceeCCCCCCCCc-----------cccccc-ccc------CCCc--ccc
Q 043792          183 WHGLSKTLAEKTAWALAMD--RGISMVSINGGLVMGPDVTISNP-----------YLKGAA-EMY------EDGV--MAS  240 (294)
Q Consensus       183 ~Y~~sK~~~e~~~~~~~~~--~~~~~~ilrp~~i~G~~~~~~~~-----------~~~~~~-~~~------~~~~--~~~  240 (294)
                      .|+.+|..+|.+++.+..+  .+++++++||+++|||+......           +..+.. .++      +++.  ..|
T Consensus       137 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  216 (314)
T TIGR02197       137 VYGYSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDF  216 (314)
T ss_pred             HHHHHHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeee
Confidence            8999999999999876433  35899999999999998543211           122322 222      2333  359


Q ss_pred             ccHHHHHHHHHhhhcCcCCCCeEEeec-ccccHHHHHHHHHHHhCCCC
Q 043792          241 VDLRFYVDAHICVFEDVSSYGRYLCFN-HVINCNEDAMKLARMLLPPS  287 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~  287 (294)
                      +|++|++++++.++.. ..++.|++++ +++++.|+++.+.+.+|.+.
T Consensus       217 i~v~D~a~~i~~~~~~-~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~  263 (314)
T TIGR02197       217 VYVKDVVDVNLWLLEN-GVSGIFNLGTGRARSFNDLADAVFKALGKDE  263 (314)
T ss_pred             EEHHHHHHHHHHHHhc-ccCceEEcCCCCCccHHHHHHHHHHHhCCCC
Confidence            9999999999999987 4455787654 67999999999999998654

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.98  E-value=3.1e-30  Score=211.61  Aligned_cols=217  Identities=18%  Similarity=0.147  Sum_probs=179.2

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc--CCEEEe
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG--CSGLFY  104 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~Vih  104 (294)
                      |+|||||++|.+|+.|++.|. .+++|++++|..                       .|++|++.+.+++++  .|+|||
T Consensus         1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-----------------------~Ditd~~~v~~~i~~~~PDvVIn   56 (281)
T COG1091           1 MKILITGANGQLGTELRRALP-GEFEVIATDRAE-----------------------LDITDPDAVLEVIRETRPDVVIN   56 (281)
T ss_pred             CcEEEEcCCChHHHHHHHHhC-CCceEEeccCcc-----------------------ccccChHHHHHHHHhhCCCEEEE
Confidence            459999999999999999998 779999988764                       499999999999984  699999


Q ss_pred             cCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccc
Q 043792          105 SFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL  182 (294)
Q Consensus       105 ~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  182 (294)
                      +|+.....  ...++..+.+|..++.|+.++|++. |. ++||+||.  +++....    ..+|.|+++..|.      +
T Consensus        57 ~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~-ga-~lVhiSTD--yVFDG~~----~~~Y~E~D~~~P~------n  122 (281)
T COG1091          57 AAAYTAVDKAESEPELAFAVNATGAENLARAAAEV-GA-RLVHISTD--YVFDGEK----GGPYKETDTPNPL------N  122 (281)
T ss_pred             CccccccccccCCHHHHHHhHHHHHHHHHHHHHHh-CC-eEEEeecc--eEecCCC----CCCCCCCCCCCCh------h
Confidence            99876543  4445689999999999999999999 86 89999998  4554333    4489999999999      9


Q ss_pred             hhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-------cccccc-cccCCCccccccHHHHHHHHHhhh
Q 043792          183 WHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-------YLKGAA-EMYEDGVMASVDLRFYVDAHICVF  254 (294)
Q Consensus       183 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-------~~~~~~-~~~~~~~~~~v~v~D~a~~i~~~~  254 (294)
                      .||+||+++|..++.+    +-+.+|+|.+++||...  .+.       ..+|+. .+..|-....+++.|+|+++..++
T Consensus       123 vYG~sKl~GE~~v~~~----~~~~~I~Rtswv~g~~g--~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll  196 (281)
T COG1091         123 VYGRSKLAGEEAVRAA----GPRHLILRTSWVYGEYG--NNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELL  196 (281)
T ss_pred             hhhHHHHHHHHHHHHh----CCCEEEEEeeeeecCCC--CCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHH
Confidence            9999999999988874    57779999999999984  121       233444 455565556999999999999999


Q ss_pred             cCcCCCCeEEeec-ccccHHHHHHHHHHHhCCCC
Q 043792          255 EDVSSYGRYLCFN-HVINCNEDAMKLARMLLPPS  287 (294)
Q Consensus       255 ~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~  287 (294)
                      ......+.|.+++ +.+||.|+++.+.+..+.+.
T Consensus       197 ~~~~~~~~yH~~~~g~~Swydfa~~I~~~~~~~~  230 (281)
T COG1091         197 EKEKEGGVYHLVNSGECSWYEFAKAIFEEAGVDG  230 (281)
T ss_pred             hccccCcEEEEeCCCcccHHHHHHHHHHHhCCCc
Confidence            8887777887665 45799999999999987544

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.98  E-value=2.6e-30  Score=226.17  Aligned_cols=244  Identities=21%  Similarity=0.157  Sum_probs=198.7

Q ss_pred             ccCccCCCCCCCCCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHH
Q 043792           14 AVDRDGYDSSNATKTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSL   92 (294)
Q Consensus        14 ~~~~~~~~~~~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~   92 (294)
                      +++....+....+|+||||||+|-||+.+|+++++.+ .+++.++|++.+...+..++.......++.++-+|+.|.+.+
T Consensus       238 ~~d~~~i~~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~  317 (588)
T COG1086         238 ALDTELIGAMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRV  317 (588)
T ss_pred             CCCHHHHHhHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHH
Confidence            4444444445678999999999999999999999986 678888999888777666543333356888999999999999


Q ss_pred             HHHhcc--CCEEEecCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           93 VNALKG--CSGLFYSFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        93 ~~~~~~--~d~Vih~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                      ..++++  +|+|||+|+..+..  ..++.+.+.+|+.||.|++++|.+. ++++||.+||..|+. +.            
T Consensus       318 ~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~-~V~~~V~iSTDKAV~-Pt------------  383 (588)
T COG1086         318 ERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKN-GVKKFVLISTDKAVN-PT------------  383 (588)
T ss_pred             HHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHh-CCCEEEEEecCcccC-Cc------------
Confidence            999997  99999999987754  4455699999999999999999999 999999999987533 11            


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc----cccccccccCCCccc--
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP----YLKGAAEMYEDGVMA--  239 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~----~~~~~~~~~~~~~~~--  239 (294)
                                   +.||.||+++|+.+..+..+.   +..++++|+|||.|....--.-    +.+|.+....+....  
T Consensus       384 -------------NvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~GgplTvTdp~mtRy  450 (588)
T COG1086         384 -------------NVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPLTVTDPDMTRF  450 (588)
T ss_pred             -------------hHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHHHHHHHHcCCCccccCCCceeE
Confidence                         789999999999999987643   3999999999999988432211    556777555555444  


Q ss_pred             cccHHHHHHHHHhhhcCcCCCCeEEe-ecccccHHHHHHHHHHHhC
Q 043792          240 SVDLRFYVDAHICVFEDVSSYGRYLC-FNHVINCNEDAMKLARMLL  284 (294)
Q Consensus       240 ~v~v~D~a~~i~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~  284 (294)
                      |+.+.|.++.++.+......+..|+. .|+++++.|+++.+.+..|
T Consensus       451 fMTI~EAv~LVlqA~a~~~gGeifvldMGepvkI~dLAk~mi~l~g  496 (588)
T COG1086         451 FMTIPEAVQLVLQAGAIAKGGEIFVLDMGEPVKIIDLAKAMIELAG  496 (588)
T ss_pred             EEEHHHHHHHHHHHHhhcCCCcEEEEcCCCCeEHHHHHHHHHHHhC
Confidence            99999999999999877665556876 4689999999999999887

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.97  E-value=8.5e-30  Score=220.73  Aligned_cols=245  Identities=19%  Similarity=0.111  Sum_probs=183.1

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC-hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCCEEEe
Q 043792           28 TVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK-LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCSGLFY  104 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~Vih  104 (294)
                      |||||||+|+||+++++.|+++|++|++++|.... ...+..   .. ...+++++.+|+.+.+.+.++++  ++|+|||
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~   76 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKR---GE-RITRVTFVEGDLRDRELLDRLFEEHKIDAVIH   76 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhh---hc-cccceEEEECCCCCHHHHHHHHHhCCCcEEEE
Confidence            68999999999999999999999999988764332 222221   11 11257788999999999999986  6899999


Q ss_pred             cCCCCCCCC--cchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccc
Q 043792          105 SFEPPSDHS--TYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL  182 (294)
Q Consensus       105 ~a~~~~~~~--~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  182 (294)
                      +|+......  ......++.|+.++.++++++.+. +++++|++||.+  .|+...    ..+++|+++..+.      +
T Consensus        77 ~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~ss~~--~~g~~~----~~~~~e~~~~~~~------~  143 (328)
T TIGR01179        77 FAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQT-GVKKFIFSSSAA--VYGEPS----SIPISEDSPLGPI------N  143 (328)
T ss_pred             CccccCcchhhcCchhhhhhhHHHHHHHHHHHHhc-CCCEEEEecchh--hcCCCC----CCCccccCCCCCC------C
Confidence            998753321  223367889999999999999988 888999999975  455433    3467888877665      7


Q ss_pred             hhHhhHHHHHHHHHHHHHh-cCCeEEEEecCceeCCCCCCC--------Cc-------cc--cccc-ccc------CC--
Q 043792          183 WHGLSKTLAEKTAWALAMD-RGISMVSINGGLVMGPDVTIS--------NP-------YL--KGAA-EMY------ED--  235 (294)
Q Consensus       183 ~Y~~sK~~~e~~~~~~~~~-~~~~~~ilrp~~i~G~~~~~~--------~~-------~~--~~~~-~~~------~~--  235 (294)
                      .|+.+|.++|.+++.++.+ .+++++++||+.+||+.....        ..       ..  .... ..+      ++  
T Consensus       144 ~y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  223 (328)
T TIGR01179       144 PYGRSKLMSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGT  223 (328)
T ss_pred             chHHHHHHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCc
Confidence            8999999999999998877 789999999999999863210        00       00  1111 111      12  


Q ss_pred             CccccccHHHHHHHHHhhhcCc---CCCCeEEee-cccccHHHHHHHHHHHhCCCCCC
Q 043792          236 GVMASVDLRFYVDAHICVFEDV---SSYGRYLCF-NHVINCNEDAMKLARMLLPPSDT  289 (294)
Q Consensus       236 ~~~~~v~v~D~a~~i~~~~~~~---~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~  289 (294)
                      ....|||++|++++++.++...   ..++.|+++ +++++++|+++.+++.+|.+.++
T Consensus       224 ~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~  281 (328)
T TIGR01179       224 CVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPV  281 (328)
T ss_pred             eEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcce
Confidence            2345999999999999988642   223458764 56799999999999999877654

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.97  E-value=3.3e-30  Score=218.62  Aligned_cols=251  Identities=21%  Similarity=0.147  Sum_probs=187.3

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ++.+++||||+||+|+||+++|++++  .+|++++..+.......+.  .......++++.+|+.|...+.+++.++ .|
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~--~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~V   79 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAEL--TGFRSGRVTVILGDLLDANSISNAFQGA-VV   79 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhh--hcccCCceeEEecchhhhhhhhhhccCc-eE
Confidence            46799999999999999999999998  8999999876543332221  1113568999999999999999999999 78


Q ss_pred             EecCCCCC-CCCc-chhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhc
Q 043792          103 FYSFEPPS-DHST-YDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKF  180 (294)
Q Consensus       103 ih~a~~~~-~~~~-~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~  180 (294)
                      +||++... .... ..+..+++|+.||.+++++|.+. +++++||+||..++.++...     ...+|+.+..    ..+
T Consensus        80 vh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~-~v~~lIYtSs~~Vvf~g~~~-----~n~~E~~p~p----~~~  149 (361)
T KOG1430|consen   80 VHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKEL-GVKRLIYTSSAYVVFGGEPI-----INGDESLPYP----LKH  149 (361)
T ss_pred             EEeccccCccccccchhhheeecchhHHHHHHHHHHh-CCCEEEEecCceEEeCCeec-----ccCCCCCCCc----ccc
Confidence            88855433 3222 35688999999999999999999 99999999999865555432     2344444333    122


Q ss_pred             cchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-----cccccc-cccC--CCccccccHHHHHHHHHh
Q 043792          181 KLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-----YLKGAA-EMYE--DGVMASVDLRFYVDAHIC  252 (294)
Q Consensus       181 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-----~~~~~~-~~~~--~~~~~~v~v~D~a~~i~~  252 (294)
                      ..+|+.||..+|+++.......++..+++||..||||++.....     +..|.. ...+  +...+|++++.++.+++.
T Consensus       150 ~d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahil  229 (361)
T KOG1430|consen  150 IDPYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHIL  229 (361)
T ss_pred             ccccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeeccccccceEEechhHHHHHH
Confidence            26899999999999999876667999999999999999654433     333443 2222  344459999999999876


Q ss_pred             hhc-----CcCCCCe-EEeec-ccccHHHHHHHHHHHhCCCCC
Q 043792          253 VFE-----DVSSYGR-YLCFN-HVINCNEDAMKLARMLLPPSD  288 (294)
Q Consensus       253 ~~~-----~~~~~~~-~~~~~-~~~s~~~~~~~~~~~~~~~~~  288 (294)
                      +..     .+...|+ |++.+ .++...+++..+.+.+|...+
T Consensus       230 A~~aL~~~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~  272 (361)
T KOG1430|consen  230 AARALLDKSPSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLP  272 (361)
T ss_pred             HHHHHHhcCCccCceEEEEeCCCcchhhHHHHHHHHhcCCCCC
Confidence            543     3445676 76655 567777777799998998776

>PLN02996 fatty acyl-CoA reductase

Probab=99.97  E-value=8.8e-30  Score=230.07  Aligned_cols=256  Identities=15%  Similarity=0.086  Sum_probs=176.0

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCC---CeEEEEecCCCCh---hhHHHHHhh-----------c-----cCCCCeEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRG---YTVHAALHNHGKL---QCIEEELIN-----------Y-----NEEKKLKV   81 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~---~~l~~~~~~-----------~-----~~~~~v~~   81 (294)
                      .++++|||||||||||++|++.|+..+   .+|+++.|..+..   +.+..++..           .     ....++++
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            457899999999999999999999864   4689999965432   122111000           0     00157899


Q ss_pred             EECCCC-------ChhHHHHHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeee
Q 043792           82 FQADPF-------DYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVW  154 (294)
Q Consensus        82 ~~~Dl~-------~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~  154 (294)
                      +.+|++       +.+.+..+++++|+|||+|+...... ......++|+.|+.+++++|++.+++++|||+||..  +|
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~-~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~--vy  165 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDE-RYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAY--VC  165 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcC-CHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeE--Ee
Confidence            999998       34456778889999999999876432 345788999999999999998864688999999985  55


Q ss_pred             CCCCCCCCCCCCCCCC-C-----CCh-----------------------------------hhhhhccchhHhhHHHHHH
Q 043792          155 NNHRDNPTSHDFDERN-W-----SDV-----------------------------------NLCKKFKLWHGLSKTLAEK  193 (294)
Q Consensus       155 ~~~~~~~~~~~~~e~~-~-----~~~-----------------------------------~~~~~~~~~Y~~sK~~~e~  193 (294)
                      |...-.-.+.++++.. +     ..+                                   .....+.+.|+.||.++|+
T Consensus       166 G~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~  245 (491)
T PLN02996        166 GEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEM  245 (491)
T ss_pred             cCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHH
Confidence            5422000011122100 0     000                                   0011123789999999999


Q ss_pred             HHHHHHHhcCCeEEEEecCceeCCCCCCCCcc--------------ccccc-cccCCCcc--ccccHHHHHHHHHhhhcC
Q 043792          194 TAWALAMDRGISMVSINGGLVMGPDVTISNPY--------------LKGAA-EMYEDGVM--ASVDLRFYVDAHICVFED  256 (294)
Q Consensus       194 ~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~~--------------~~~~~-~~~~~~~~--~~v~v~D~a~~i~~~~~~  256 (294)
                      ++..+.  .+++++++||++|||+.......+              .+|.. .+++++..  .+|||+|++.+++.++..
T Consensus       246 lv~~~~--~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~  323 (491)
T PLN02996        246 LLGNFK--ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAA  323 (491)
T ss_pred             HHHHhc--CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHH
Confidence            998874  389999999999999975332111              23333 35566543  399999999999998875


Q ss_pred             c--C-CCC-eEEeec---ccccHHHHHHHHHHHhC
Q 043792          257 V--S-SYG-RYLCFN---HVINCNEDAMKLARMLL  284 (294)
Q Consensus       257 ~--~-~~~-~~~~~~---~~~s~~~~~~~~~~~~~  284 (294)
                      .  . ..+ .|++++   .++++.++++.+.+.++
T Consensus       324 ~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~  358 (491)
T PLN02996        324 HAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFS  358 (491)
T ss_pred             hhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhh
Confidence            3  1 223 487764   47999999999988665

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.97  E-value=7.2e-31  Score=216.56  Aligned_cols=230  Identities=20%  Similarity=0.131  Sum_probs=168.6

Q ss_pred             EEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCChhhHHHHHhhccCCCCeEE----EECCCCChhHHHHHhc--cCCE
Q 043792           29 VCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEEELINYNEEKKLKV----FQADPFDYHSLVNALK--GCSG  101 (294)
Q Consensus        29 vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~----~~~Dl~~~~~~~~~~~--~~d~  101 (294)
                      ||||||+|.||+.||++|++.+ .++++++|++...-.+..+++......++++    +.+|+.|.+.+..+++  ++|+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            7999999999999999999987 6799999998877776665422223345544    4899999999999999  8999


Q ss_pred             EEecCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhh
Q 043792          102 LFYSFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKK  179 (294)
Q Consensus       102 Vih~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~  179 (294)
                      |||.|+..+..  ..++.+.+++|+.||.|++++|.++ ++++||++||..|+.                    |.    
T Consensus        81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~-~v~~~v~ISTDKAv~--------------------Pt----  135 (293)
T PF02719_consen   81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEH-GVERFVFISTDKAVN--------------------PT----  135 (293)
T ss_dssp             EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHT-T-SEEEEEEECGCSS--------------------------
T ss_pred             EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEccccccCC--------------------CC----
Confidence            99999987753  3445689999999999999999999 999999999986422                    11    


Q ss_pred             ccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc----ccccccccc--CCCccccccHHHHHHHH
Q 043792          180 FKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP----YLKGAAEMY--EDGVMASVDLRFYVDAH  250 (294)
Q Consensus       180 ~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~----~~~~~~~~~--~~~~~~~v~v~D~a~~i  250 (294)
                        +.||+||+.+|+++..+....   +..++++|+|||.|.....-..    +.+|.+...  ++-...|+.+++.++.+
T Consensus       136 --nvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lv  213 (293)
T PF02719_consen  136 --NVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLV  213 (293)
T ss_dssp             --SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHH
T ss_pred             --cHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHH
Confidence              789999999999999988765   6899999999999887322111    455666333  34444599999999999


Q ss_pred             HhhhcCcCCCCeEEe-ecccccHHHHHHHHHHHhCC
Q 043792          251 ICVFEDVSSYGRYLC-FNHVINCNEDAMKLARMLLP  285 (294)
Q Consensus       251 ~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~  285 (294)
                      +.++.....+..|+. .++++++.|+++.+.+..|.
T Consensus       214 l~a~~~~~~geifvl~mg~~v~I~dlA~~~i~~~g~  249 (293)
T PF02719_consen  214 LQAAALAKGGEIFVLDMGEPVKILDLAEAMIELSGL  249 (293)
T ss_dssp             HHHHHH--TTEEEEE---TCEECCCHHHHHHHHTT-
T ss_pred             HHHHhhCCCCcEEEecCCCCcCHHHHHHHHHhhccc
Confidence            999876655445766 46889999999999998874

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.97  E-value=9.3e-30  Score=217.13  Aligned_cols=235  Identities=17%  Similarity=0.126  Sum_probs=164.1

Q ss_pred             EEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEecCCC
Q 043792           29 VCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSFEP  108 (294)
Q Consensus        29 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~a~~  108 (294)
                      ||||||+||||+++++.|+++|++|++++|+......+..          ..  ..|+.. ..+.+.+.++|+|||+|+.
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----------~~--~~~~~~-~~~~~~~~~~D~Vvh~a~~   67 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW----------EG--YKPWAP-LAESEALEGADAVINLAGE   67 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc----------ee--eecccc-cchhhhcCCCCEEEECCCC
Confidence            6899999999999999999999999999998765322111          01  112222 4456677899999999987


Q ss_pred             CCCCC----cchhhhHhHhhHHHHHHHHHHHhcCCCc--EEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccc
Q 043792          109 PSDHS----TYDELTAEVETMAAHNVLEACAQTNTVD--KVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL  182 (294)
Q Consensus       109 ~~~~~----~~~~~~~~~n~~~~~~ll~~~~~~~~~~--~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  182 (294)
                      .....    ......++.|+.++.++++++++. +++  +||+.||.  ..|+...    ..+++|+.+..+.      +
T Consensus        68 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~i~~S~~--~~yg~~~----~~~~~E~~~~~~~------~  134 (292)
T TIGR01777        68 PIADKRWTEERKQEIRDSRIDTTRALVEAIAAA-EQKPKVFISASAV--GYYGTSE----DRVFTEEDSPAGD------D  134 (292)
T ss_pred             CcccccCCHHHHHHHHhcccHHHHHHHHHHHhc-CCCceEEEEeeeE--EEeCCCC----CCCcCcccCCCCC------C
Confidence            54321    123367889999999999999998 764  34444443  4566543    4477888754333      4


Q ss_pred             hhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCcc---cc-ccccccCC--CccccccHHHHHHHHHhhhcC
Q 043792          183 WHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPY---LK-GAAEMYED--GVMASVDLRFYVDAHICVFED  256 (294)
Q Consensus       183 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~~---~~-~~~~~~~~--~~~~~v~v~D~a~~i~~~~~~  256 (294)
                      .|+..+...|..+..+ .+.+++++++||+.+|||.......+   .. .....+++  ..++|+|++|+|+++..++++
T Consensus       135 ~~~~~~~~~e~~~~~~-~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l~~  213 (292)
T TIGR01777       135 FLAELCRDWEEAAQAA-EDLGTRVVLLRTGIVLGPKGGALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFALEN  213 (292)
T ss_pred             hHHHHHHHHHHHhhhc-hhcCCceEEEeeeeEECCCcchhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHhcC
Confidence            5666666667666543 34689999999999999974211111   11 11111333  335599999999999999987


Q ss_pred             cCCCCeEEee-cccccHHHHHHHHHHHhCCCCCCC
Q 043792          257 VSSYGRYLCF-NHVINCNEDAMKLARMLLPPSDTS  290 (294)
Q Consensus       257 ~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~  290 (294)
                      +...+.|+++ ++++++.|+++.+.+.+|.+..+.
T Consensus       214 ~~~~g~~~~~~~~~~s~~di~~~i~~~~g~~~~~~  248 (292)
T TIGR01777       214 ASISGPVNATAPEPVRNKEFAKALARALHRPAFFP  248 (292)
T ss_pred             cccCCceEecCCCccCHHHHHHHHHHHhCCCCcCc
Confidence            6666777665 567999999999999998765443

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.97  E-value=2e-30  Score=219.61  Aligned_cols=220  Identities=20%  Similarity=0.192  Sum_probs=161.7

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc--CCEEEe
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG--CSGLFY  104 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~Vih  104 (294)
                      ||||||||+|+||++|++.|.++|++|+++.|..                       .|+.|.+.+.+.++.  .|+|||
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~~-----------------------~dl~d~~~~~~~~~~~~pd~Vin   57 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRSD-----------------------LDLTDPEAVAKLLEAFKPDVVIN   57 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTTC-----------------------S-TTSHHHHHHHHHHH--SEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCchh-----------------------cCCCCHHHHHHHHHHhCCCeEec
Confidence            7999999999999999999999999999987662                       389999999999874  799999


Q ss_pred             cCCCCCC--CCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccc
Q 043792          105 SFEPPSD--HSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL  182 (294)
Q Consensus       105 ~a~~~~~--~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  182 (294)
                      ||+....  ...+++..+.+|+.++.+|+++|.+. ++ ++||+||..  +|+...    ..+++|+++..|.      +
T Consensus        58 ~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~-~~-~li~~STd~--VFdG~~----~~~y~E~d~~~P~------~  123 (286)
T PF04321_consen   58 CAAYTNVDACEKNPEEAYAINVDATKNLAEACKER-GA-RLIHISTDY--VFDGDK----GGPYTEDDPPNPL------N  123 (286)
T ss_dssp             ------HHHHHHSHHHHHHHHTHHHHHHHHHHHHC-T--EEEEEEEGG--GS-SST----SSSB-TTS----S------S
T ss_pred             cceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHc-CC-cEEEeeccE--EEcCCc----ccccccCCCCCCC------C
Confidence            9987543  23345588999999999999999998 75 899999985  554333    4479999998888      9


Q ss_pred             hhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-----cccccc-cccCCCccccccHHHHHHHHHhhhcC
Q 043792          183 WHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-----YLKGAA-EMYEDGVMASVDLRFYVDAHICVFED  256 (294)
Q Consensus       183 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-----~~~~~~-~~~~~~~~~~v~v~D~a~~i~~~~~~  256 (294)
                      .||.+|..+|+.++..    .-+++|+|++.+||+.......     +.+++. ....+....++|++|+|+++..++++
T Consensus       124 ~YG~~K~~~E~~v~~~----~~~~~IlR~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~  199 (286)
T PF04321_consen  124 VYGRSKLEGEQAVRAA----CPNALILRTSWVYGPSGRNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEK  199 (286)
T ss_dssp             HHHHHHHHHHHHHHHH-----SSEEEEEE-SEESSSSSSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHh----cCCEEEEecceecccCCCchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHh
Confidence            9999999999999883    2488999999999994211111     333444 55667777799999999999999987


Q ss_pred             cCC----CCeEEe-ecccccHHHHHHHHHHHhCCCC
Q 043792          257 VSS----YGRYLC-FNHVINCNEDAMKLARMLLPPS  287 (294)
Q Consensus       257 ~~~----~~~~~~-~~~~~s~~~~~~~~~~~~~~~~  287 (294)
                      ...    .|.|.+ +++.+|+.|+++.+++.++.+.
T Consensus       200 ~~~~~~~~Giyh~~~~~~~S~~e~~~~i~~~~~~~~  235 (286)
T PF04321_consen  200 NLSGASPWGIYHLSGPERVSRYEFAEAIAKILGLDP  235 (286)
T ss_dssp             HHH-GGG-EEEE---BS-EEHHHHHHHHHHHHTHCT
T ss_pred             cccccccceeEEEecCcccCHHHHHHHHHHHhCCCC
Confidence            654    567755 5577999999999999998765

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7.9e-29  Score=233.81  Aligned_cols=243  Identities=17%  Similarity=0.128  Sum_probs=175.6

Q ss_pred             CeEEEeCCCchHHHHHHHHHH--HCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCCh------hHHHHHhcc
Q 043792           27 KTVCVMDASGHFASALVRRLL--LRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDY------HSLVNALKG   98 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~--~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~------~~~~~~~~~   98 (294)
                      |+|||||||||||++|++.|+  ++|++|++++|+... ..+.... ......+++++.+|++|+      +.+.++ ++
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~-~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~   77 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLEALA-AYWGADRVVPLVGDLTEPGLGLSEADIAEL-GD   77 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHHHHH-HhcCCCcEEEEecccCCccCCcCHHHHHHh-cC
Confidence            589999999999999999999  579999999996532 2222200 011124789999999984      445555 88


Q ss_pred             CCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhh
Q 043792           99 CSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCK  178 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~  178 (294)
                      +|+|||||+...... ......++|+.++.+++++|.+. ++++|||+||.+  +|+...    . +++|+.+..+.   
T Consensus        78 ~D~Vih~Aa~~~~~~-~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~~SS~~--v~g~~~----~-~~~e~~~~~~~---  145 (657)
T PRK07201         78 IDHVVHLAAIYDLTA-DEEAQRAANVDGTRNVVELAERL-QAATFHHVSSIA--VAGDYE----G-VFREDDFDEGQ---  145 (657)
T ss_pred             CCEEEECceeecCCC-CHHHHHHHHhHHHHHHHHHHHhc-CCCeEEEEeccc--cccCcc----C-ccccccchhhc---
Confidence            999999998765433 23467889999999999999998 889999999986  444322    2 34554432211   


Q ss_pred             hccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc----------c---ccccc---cccC--CCcccc
Q 043792          179 KFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP----------Y---LKGAA---EMYE--DGVMAS  240 (294)
Q Consensus       179 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~----------~---~~~~~---~~~~--~~~~~~  240 (294)
                      .+.+.|+.+|..+|++++.   ..+++++++||++|||+.......          +   +...+   ....  .+...+
T Consensus       146 ~~~~~Y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (657)
T PRK07201        146 GLPTPYHRTKFEAEKLVRE---ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNI  222 (657)
T ss_pred             CCCCchHHHHHHHHHHHHH---cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeee
Confidence            1126799999999999875   358999999999999986432110          0   01111   1222  234459


Q ss_pred             ccHHHHHHHHHhhhcCcCCCC-eEEee-cccccHHHHHHHHHHHhCCCC
Q 043792          241 VDLRFYVDAHICVFEDVSSYG-RYLCF-NHVINCNEDAMKLARMLLPPS  287 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~~~~~-~~~~~-~~~~s~~~~~~~~~~~~~~~~  287 (294)
                      +|++|+++++..+++.+...+ .|+++ ++++++.|+++.+.+.+|.+.
T Consensus       223 v~vddva~ai~~~~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~  271 (657)
T PRK07201        223 VPVDYVADALDHLMHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPP  271 (657)
T ss_pred             eeHHHHHHHHHHHhcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCc
Confidence            999999999999987655545 58765 468999999999999998765

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.97  E-value=8.7e-29  Score=217.63  Aligned_cols=250  Identities=14%  Similarity=0.105  Sum_probs=175.1

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCCChh---hHHHHHhhcc-----CC-CCeEEEECCCCCh------h
Q 043792           28 TVCVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQ---CIEEELINYN-----EE-KKLKVFQADPFDY------H   90 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~---~l~~~~~~~~-----~~-~~v~~~~~Dl~~~------~   90 (294)
                      +|+|||||||||++|++.|+++|  ++|++++|+.+...   .+.+.+....     .. .+++++.+|++++      +
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999998  67999999876332   2222110100     01 4789999998754      4


Q ss_pred             HHHHHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCC
Q 043792           91 SLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERN  170 (294)
Q Consensus        91 ~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~  170 (294)
                      .+..+..++|+|||+|+....... .+...+.|+.++.+++++|.+. ++++||++||.+++  +...    ..+..|+.
T Consensus        81 ~~~~~~~~~d~vih~a~~~~~~~~-~~~~~~~nv~g~~~ll~~a~~~-~~~~~v~iSS~~v~--~~~~----~~~~~~~~  152 (367)
T TIGR01746        81 EWERLAENVDTIVHNGALVNWVYP-YSELRAANVLGTREVLRLAASG-RAKPLHYVSTISVL--AAID----LSTVTEDD  152 (367)
T ss_pred             HHHHHHhhCCEEEeCCcEeccCCc-HHHHhhhhhHHHHHHHHHHhhC-CCceEEEEcccccc--CCcC----CCCccccc
Confidence            667777889999999997654332 3467789999999999999988 88889999998743  3222    11233333


Q ss_pred             CCChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCC---c----ccccc--ccccCCC---cc
Q 043792          171 WSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISN---P----YLKGA--AEMYEDG---VM  238 (294)
Q Consensus       171 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~---~----~~~~~--~~~~~~~---~~  238 (294)
                      +...... ...+.|+.+|+.+|.+++.+... |++++++||+.+||+......   .    +..+.  ...+++.   ..
T Consensus       153 ~~~~~~~-~~~~~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  230 (367)
T TIGR01746       153 AIVTPPP-GLAGGYAQSKWVAELLVREASDR-GLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTE  230 (367)
T ss_pred             ccccccc-ccCCChHHHHHHHHHHHHHHHhc-CCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCcccc
Confidence            3221111 11267999999999999887654 999999999999997422111   0    11110  0122222   34


Q ss_pred             ccccHHHHHHHHHhhhcCcCC---CCeEEeec-ccccHHHHHHHHHHHhCCCCC
Q 043792          239 ASVDLRFYVDAHICVFEDVSS---YGRYLCFN-HVINCNEDAMKLARMLLPPSD  288 (294)
Q Consensus       239 ~~v~v~D~a~~i~~~~~~~~~---~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~  288 (294)
                      .|+|++|+|++++.++..+..   ++.|++.+ +++++.|+++.+.+ .|.+.+
T Consensus       231 ~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~~  283 (367)
T TIGR01746       231 DLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNLK  283 (367)
T ss_pred             CcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCCC
Confidence            499999999999999876553   34576654 77999999999998 776654

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN00016 RNA-binding protein; Provisional

Probab=99.97  E-value=7.9e-29  Score=218.58  Aligned_cols=228  Identities=13%  Similarity=0.122  Sum_probs=165.6

Q ss_pred             CCCCeEEEe----CCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHH-H-hh-ccCCCCeEEEECCCCChhHHHHHh
Q 043792           24 NATKTVCVM----DASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEE-L-IN-YNEEKKLKVFQADPFDYHSLVNAL   96 (294)
Q Consensus        24 ~~~~~vlIt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~-~-~~-~~~~~~v~~~~~Dl~~~~~~~~~~   96 (294)
                      .++++||||    |||||||++|++.|+++||+|++++|+......+... + .. .....+++++.+|+.|   +.+++
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~  126 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKV  126 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhhh
Confidence            446799999    9999999999999999999999999987543221100 0 00 0011358999999977   43444


Q ss_pred             --ccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCCh
Q 043792           97 --KGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDV  174 (294)
Q Consensus        97 --~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~  174 (294)
                        .++|+|||+++.              +..++.+++++|++. ++++|||+||.+  +|+...    ..+..|+++..+
T Consensus       127 ~~~~~d~Vi~~~~~--------------~~~~~~~ll~aa~~~-gvkr~V~~SS~~--vyg~~~----~~p~~E~~~~~p  185 (378)
T PLN00016        127 AGAGFDVVYDNNGK--------------DLDEVEPVADWAKSP-GLKQFLFCSSAG--VYKKSD----EPPHVEGDAVKP  185 (378)
T ss_pred             ccCCccEEEeCCCC--------------CHHHHHHHHHHHHHc-CCCEEEEEccHh--hcCCCC----CCCCCCCCcCCC
Confidence              478999999753              145688999999998 999999999986  455433    335667665443


Q ss_pred             hhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCC------ccccccc-cccCCCc--cccccHHH
Q 043792          175 NLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISN------PYLKGAA-EMYEDGV--MASVDLRF  245 (294)
Q Consensus       175 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~------~~~~~~~-~~~~~~~--~~~v~v~D  245 (294)
                      .      .    +|..+|.+++.    .+++++++||+++||+......      .+..+.+ .+++++.  ..|+|++|
T Consensus       186 ~------~----sK~~~E~~l~~----~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~D  251 (378)
T PLN00016        186 K------A----GHLEVEAYLQK----LGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKD  251 (378)
T ss_pred             c------c----hHHHHHHHHHH----cCCCeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHH
Confidence            3      2    79999987753    5899999999999999753221      0334444 3344444  34999999


Q ss_pred             HHHHHHhhhcCcCC-CCeEEeec-ccccHHHHHHHHHHHhCCCCCC
Q 043792          246 YVDAHICVFEDVSS-YGRYLCFN-HVINCNEDAMKLARMLLPPSDT  289 (294)
Q Consensus       246 ~a~~i~~~~~~~~~-~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~  289 (294)
                      +|++++.++.++.. ++.|++++ +.+++.|+++.+.+.+|.+.++
T Consensus       252 va~ai~~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~i  297 (378)
T PLN00016        252 LASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFPEEI  297 (378)
T ss_pred             HHHHHHHHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCCCCce
Confidence            99999999987644 34587765 5699999999999999976543

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.96  E-value=6.9e-28  Score=193.31  Aligned_cols=236  Identities=17%  Similarity=0.163  Sum_probs=172.5

Q ss_pred             EEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-cCCEEEecCC
Q 043792           29 VCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-GCSGLFYSFE  107 (294)
Q Consensus        29 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-~~d~Vih~a~  107 (294)
                      |+|||||||||++|+..|.+.||+|++++|++.+.+....        ..+       ...+.+.+... ++|+|||+||
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~--------~~v-------~~~~~~~~~~~~~~DavINLAG   65 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH--------PNV-------TLWEGLADALTLGIDAVINLAG   65 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC--------ccc-------cccchhhhcccCCCCEEEECCC
Confidence            6899999999999999999999999999999876543322        111       12234444555 7999999999


Q ss_pred             CCCCCC----cchhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccc
Q 043792          108 PPSDHS----TYDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL  182 (294)
Q Consensus       108 ~~~~~~----~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  182 (294)
                      .+....    ...+.+.+..+..|..|.++..+. .+.+.+|.-|.++  +||...    +..++|+++....+      
T Consensus        66 ~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvG--yYG~~~----~~~~tE~~~~g~~F------  133 (297)
T COG1090          66 EPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVG--YYGHSG----DRVVTEESPPGDDF------  133 (297)
T ss_pred             CccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEE--EecCCC----ceeeecCCCCCCCh------
Confidence            866544    223488999999999999998866 2444555555544  777777    77899986654442      


Q ss_pred             hhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc----cccccccccCCCccc--cccHHHHHHHHHhhhcC
Q 043792          183 WHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP----YLKGAAEMYEDGVMA--SVDLRFYVDAHICVFED  256 (294)
Q Consensus       183 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~----~~~~~~~~~~~~~~~--~v~v~D~a~~i~~~~~~  256 (294)
                       -+..-...|+....+ +..|.+++.+|.|.|.++....-..    +..+-..-+++|.++  |||++|++++|..++++
T Consensus       134 -la~lc~~WE~~a~~a-~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~  211 (297)
T COG1090         134 -LAQLCQDWEEEALQA-QQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLEN  211 (297)
T ss_pred             -HHHHHHHHHHHHhhh-hhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhC
Confidence             233334445555543 3458999999999999988322211    112222456777776  99999999999999999


Q ss_pred             cCCCCeEEe-ecccccHHHHHHHHHHHhCCCCCCCCCC
Q 043792          257 VSSYGRYLC-FNHVINCNEDAMKLARMLLPPSDTSTPP  293 (294)
Q Consensus       257 ~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~p  293 (294)
                      +...|.|+. ++.+++.+++...+.+.+.++..++.|.
T Consensus       212 ~~lsGp~N~taP~PV~~~~F~~al~r~l~RP~~~~vP~  249 (297)
T COG1090         212 EQLSGPFNLTAPNPVRNKEFAHALGRALHRPAILPVPS  249 (297)
T ss_pred             cCCCCcccccCCCcCcHHHHHHHHHHHhCCCccccCcH
Confidence            999898765 5688999999999999999887766653

>PLN02778 3,5-epimerase/4-reductase

Probab=99.96  E-value=1.4e-27  Score=203.76  Aligned_cols=222  Identities=11%  Similarity=0.066  Sum_probs=154.9

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCCE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCSG  101 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~  101 (294)
                      ...||||||||+||||++|+++|+++|++|+...+                          |+.|.+.+...++  ++|+
T Consensus         7 ~~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~--------------------------~~~~~~~v~~~l~~~~~D~   60 (298)
T PLN02778          7 SATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG--------------------------RLENRASLEADIDAVKPTH   60 (298)
T ss_pred             CCCCeEEEECCCCHHHHHHHHHHHhCCCEEEEecC--------------------------ccCCHHHHHHHHHhcCCCE
Confidence            34589999999999999999999999999875322                          3334444555554  6899


Q ss_pred             EEecCCCCCCC-----CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhh
Q 043792          102 LFYSFEPPSDH-----STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNL  176 (294)
Q Consensus       102 Vih~a~~~~~~-----~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~  176 (294)
                      |||+|+.....     ..++...+++|+.++.+++++|++. +++ ++++||.+.+.++...-.....+++|+++..+..
T Consensus        61 ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~-gv~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~  138 (298)
T PLN02778         61 VFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER-GLV-LTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTG  138 (298)
T ss_pred             EEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCC-EEEEecceEeCCCCCCCcccCCCCCcCCCCCCCC
Confidence            99999976432     1234578999999999999999999 886 5566766544443311000122467665433221


Q ss_pred             hhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc----cccccccccCCCccccccHHHHHHHHHh
Q 043792          177 CKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP----YLKGAAEMYEDGVMASVDLRFYVDAHIC  252 (294)
Q Consensus       177 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~----~~~~~~~~~~~~~~~~v~v~D~a~~i~~  252 (294)
                           +.|+.+|.++|.++..|.     +..++|++.++|++......    ++.+.....-.  ..++|++|++++++.
T Consensus       139 -----s~Yg~sK~~~E~~~~~y~-----~~~~lr~~~~~~~~~~~~~~fi~~~~~~~~~~~~~--~s~~yv~D~v~al~~  206 (298)
T PLN02778        139 -----SFYSKTKAMVEELLKNYE-----NVCTLRVRMPISSDLSNPRNFITKITRYEKVVNIP--NSMTILDELLPISIE  206 (298)
T ss_pred             -----CchHHHHHHHHHHHHHhh-----ccEEeeecccCCcccccHHHHHHHHHcCCCeeEcC--CCCEEHHHHHHHHHH
Confidence                 789999999999998875     34678888777765321111    23333211111  149999999999999


Q ss_pred             hhcCcCCCCeEEe-ecccccHHHHHHHHHHHhCCC
Q 043792          253 VFEDVSSYGRYLC-FNHVINCNEDAMKLARMLLPP  286 (294)
Q Consensus       253 ~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~  286 (294)
                      +++.+. +|.|++ +++.+|+.|+++.+++.+++.
T Consensus       207 ~l~~~~-~g~yNigs~~~iS~~el~~~i~~~~~~~  240 (298)
T PLN02778        207 MAKRNL-TGIYNFTNPGVVSHNEILEMYRDYIDPS  240 (298)
T ss_pred             HHhCCC-CCeEEeCCCCcccHHHHHHHHHHHhCCC
Confidence            987643 467876 456799999999999999975

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.96  E-value=2e-28  Score=203.92  Aligned_cols=215  Identities=16%  Similarity=0.154  Sum_probs=126.9

Q ss_pred             EeCCCchHHHHHHHHHHHCCC--eEEEEecCCCCh---hhHHHHHhh-----c---cCCCCeEEEECCCCCh------hH
Q 043792           31 VMDASGHFASALVRRLLLRGY--TVHAALHNHGKL---QCIEEELIN-----Y---NEEKKLKVFQADPFDY------HS   91 (294)
Q Consensus        31 ItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~---~~l~~~~~~-----~---~~~~~v~~~~~Dl~~~------~~   91 (294)
                      |||||||+|++|+++|++++.  +|+++.|..+..   +.+.+.+..     .   ...++++++.+|++++      +.
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999986  999999987542   223221100     0   1257999999999875      56


Q ss_pred             HHHHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCC
Q 043792           92 LVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNW  171 (294)
Q Consensus        92 ~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~  171 (294)
                      +..+.+++|+|||||+.......+. .++++|+.|+.++++.|... ..++|+|+||.  ++.+.......+..+.+...
T Consensus        81 ~~~L~~~v~~IiH~Aa~v~~~~~~~-~~~~~NV~gt~~ll~la~~~-~~~~~~~iSTa--~v~~~~~~~~~~~~~~~~~~  156 (249)
T PF07993_consen   81 YQELAEEVDVIIHCAASVNFNAPYS-ELRAVNVDGTRNLLRLAAQG-KRKRFHYISTA--YVAGSRPGTIEEKVYPEEED  156 (249)
T ss_dssp             HHHHHHH--EEEE--SS-SBS-S---EEHHHHHHHHHHHHHHHTSS-S---EEEEEEG--GGTTS-TTT--SSS-HHH--
T ss_pred             hhccccccceeeecchhhhhcccch-hhhhhHHHHHHHHHHHHHhc-cCcceEEeccc--cccCCCCCcccccccccccc
Confidence            7777789999999999988766544 68899999999999999977 55699999993  44443330000101101111


Q ss_pred             CChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc------------cccccc-cccCC--C
Q 043792          172 SDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP------------YLKGAA-EMYED--G  236 (294)
Q Consensus       172 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~------------~~~~~~-~~~~~--~  236 (294)
                       .........+.|..||+++|++++.+..+.|++++|+||+.|+|........            +..|.. ...++  .
T Consensus       157 -~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  235 (249)
T PF07993_consen  157 -DLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDA  235 (249)
T ss_dssp             -EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---T
T ss_pred             -cchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCc
Confidence             1111122238899999999999999998889999999999999943221111            111222 22222  2


Q ss_pred             ccccccHHHHHHHH
Q 043792          237 VMASVDLRFYVDAH  250 (294)
Q Consensus       237 ~~~~v~v~D~a~~i  250 (294)
                      ...++.||.+|++|
T Consensus       236 ~~d~vPVD~va~aI  249 (249)
T PF07993_consen  236 RLDLVPVDYVARAI  249 (249)
T ss_dssp             T--EEEHHHHHHHH
T ss_pred             eEeEECHHHHHhhC
Confidence            46699999999986

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.95  E-value=3.9e-26  Score=193.34  Aligned_cols=232  Identities=18%  Similarity=0.120  Sum_probs=166.0

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------c
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------G   98 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~   98 (294)
                      .++||||||+|+||++++++|+++|++|++++|+.+..+.+..+     ...++.++.+|++|.+++.++++       +
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKAR-----YGDRLWVLQLDVTDSAAVRAVVDRAFAALGR   76 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh-----ccCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            47899999999999999999999999999999987555544431     12468899999999998877764       4


Q ss_pred             CCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHH----HhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           99 CSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEAC----AQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                      +|+||||++.......      ..+..+++|+.++.++++++    ++. +.++||++||.++..... .    .     
T Consensus        77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~-~----~-----  145 (276)
T PRK06482         77 IDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQ-GGGRIVQVSSEGGQIAYP-G----F-----  145 (276)
T ss_pred             CCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEEcCcccccCCC-C----C-----
Confidence            7999999987543221      12367889999999999997    444 668999999975321100 0    1     


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCce---eCCCCCCCCc--cccccc-----cccCC
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLV---MGPDVTISNP--YLKGAA-----EMYED  235 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i---~G~~~~~~~~--~~~~~~-----~~~~~  235 (294)
                                   +.|+.+|.+.|.+++.++.+   ++++++++|||.+   ||++......  ...+.+     .....
T Consensus       146 -------------~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (276)
T PRK06482        146 -------------SLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALAD  212 (276)
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhh
Confidence                         67999999999999988766   5899999999988   5544221110  111111     11112


Q ss_pred             Cccc-cccHHHHHHHHHhhhcCcCCCCeEEeec-ccccHHHHHHHHHHHhCCC
Q 043792          236 GVMA-SVDLRFYVDAHICVFEDVSSYGRYLCFN-HVINCNEDAMKLARMLLPP  286 (294)
Q Consensus       236 ~~~~-~v~v~D~a~~i~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~  286 (294)
                      +.+. +.+++|++++++.++..+.....|++++ +..+..++++.+.+.+.+.
T Consensus       213 ~~~~~~~d~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  265 (276)
T PRK06482        213 GSFAIPGDPQKMVQAMIASADQTPAPRRLTLGSDAYASIRAALSERLAALEAQ  265 (276)
T ss_pred             ccCCCCCCHHHHHHHHHHHHcCCCCCeEEecChHHHHHHHHHHHHHHHHHHHH
Confidence            2222 5789999999999998665545677765 4577777777777666543

>PRK05865 hypothetical protein; Provisional

Probab=99.95  E-value=5.7e-26  Score=213.22  Aligned_cols=195  Identities=20%  Similarity=0.160  Sum_probs=153.1

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEecC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSF  106 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~a  106 (294)
                      |+|+||||+||||+++++.|+++|++|++++|+....        .   ..++.++.+|+.|.+++.++++++|+|||||
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~--------~---~~~v~~v~gDL~D~~~l~~al~~vD~VVHlA   69 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS--------W---PSSADFIAADIRDATAVESAMTGADVVAHCA   69 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh--------c---ccCceEEEeeCCCHHHHHHHHhCCCEEEECC
Confidence            5899999999999999999999999999999874321        1   1268899999999999999999999999999


Q ss_pred             CCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHh
Q 043792          107 EPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGL  186 (294)
Q Consensus       107 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~  186 (294)
                      +...       ..+++|+.++.+++++|++. ++++||++||.                                .    
T Consensus        70 a~~~-------~~~~vNv~GT~nLLeAa~~~-gvkr~V~iSS~--------------------------------~----  105 (854)
T PRK05865         70 WVRG-------RNDHINIDGTANVLKAMAET-GTGRIVFTSSG--------------------------------H----  105 (854)
T ss_pred             Cccc-------chHHHHHHHHHHHHHHHHHc-CCCeEEEECCc--------------------------------H----
Confidence            8643       24689999999999999998 88999999984                                1    


Q ss_pred             hHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-cccccccccC--CCc--cccccHHHHHHHHHhhhcCcC-CC
Q 043792          187 SKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-YLKGAAEMYE--DGV--MASVDLRFYVDAHICVFEDVS-SY  260 (294)
Q Consensus       187 sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~~~~--~~~--~~~v~v~D~a~~i~~~~~~~~-~~  260 (294)
                       |..+|+++.    +++++++++||+++|||+...... +. . ...++  ++.  ..|||++|+|++++.++++.. .+
T Consensus       106 -K~aaE~ll~----~~gl~~vILRp~~VYGP~~~~~i~~ll-~-~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~g  178 (854)
T PRK05865        106 -QPRVEQMLA----DCGLEWVAVRCALIFGRNVDNWVQRLF-A-LPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDS  178 (854)
T ss_pred             -HHHHHHHHH----HcCCCEEEEEeceEeCCChHHHHHHHh-c-CceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCC
Confidence             677787664    368999999999999997321000 11 1 12222  222  359999999999999986543 34


Q ss_pred             CeEEee-cccccHHHHHHHHHHHh
Q 043792          261 GRYLCF-NHVINCNEDAMKLARML  283 (294)
Q Consensus       261 ~~~~~~-~~~~s~~~~~~~~~~~~  283 (294)
                      +.|+++ ++.+|++|+++.+.+..
T Consensus       179 gvyNIgsg~~~Si~EIae~l~~~~  202 (854)
T PRK05865        179 GPVNLAAPGELTFRRIAAALGRPM  202 (854)
T ss_pred             CeEEEECCCcccHHHHHHHHhhhh
Confidence            568765 56799999999988743

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.94  E-value=2.7e-25  Score=202.52  Aligned_cols=251  Identities=14%  Similarity=0.158  Sum_probs=171.3

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCC---eEEEEecCCCCh---hhHHHHHh---------hc-c------CCCCeEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGY---TVHAALHNHGKL---QCIEEELI---------NY-N------EEKKLKV   81 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~---~~l~~~~~---------~~-~------~~~~v~~   81 (294)
                      .++++|||||||||||++|++.|++.+.   +|+++.|..+..   +.+.+++.         .. .      ...++.+
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            4679999999999999999999998753   689999965432   22221110         00 0      1357899


Q ss_pred             EECCCCCh------hHHHHHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeC
Q 043792           82 FQADPFDY------HSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWN  155 (294)
Q Consensus        82 ~~~Dl~~~------~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~  155 (294)
                      +.+|++++      +.+..+.+++|+|||+|+..... ...+...++|+.++.+++++|++.+++++|||+||.  ++||
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~-~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTa--yVyG  273 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFD-ERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTA--YVNG  273 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccc-cCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCc--eeec
Confidence            99999986      45566667899999999987643 234578999999999999999887467899999997  5666


Q ss_pred             CCCCCCCCCCCCCCCCC----------------------Ch-------------------------------hhhhhccc
Q 043792          156 NHRDNPTSHDFDERNWS----------------------DV-------------------------------NLCKKFKL  182 (294)
Q Consensus       156 ~~~~~~~~~~~~e~~~~----------------------~~-------------------------------~~~~~~~~  182 (294)
                      ...    . .+.|....                      .+                               .....+.+
T Consensus       274 ~~~----G-~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pN  348 (605)
T PLN02503        274 QRQ----G-RIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQD  348 (605)
T ss_pred             CCC----C-eeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCC
Confidence            542    1 12221110                      00                               00112238


Q ss_pred             hhHhhHHHHHHHHHHHHHhcCCeEEEEecCce----------eCCCCCCCCc----cccccc-cccCC--CccccccHHH
Q 043792          183 WHGLSKTLAEKTAWALAMDRGISMVSINGGLV----------MGPDVTISNP----YLKGAA-EMYED--GVMASVDLRF  245 (294)
Q Consensus       183 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i----------~G~~~~~~~~----~~~~~~-~~~~~--~~~~~v~v~D  245 (294)
                      .|..||.++|++++.+.  .+++++|+||+.|          ++++.....+    ..+|.. .++++  ....+|+||.
T Consensus       349 tYt~TK~lAE~lV~~~~--~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~  426 (605)
T PLN02503        349 TYVFTKAMGEMVINSMR--GDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADM  426 (605)
T ss_pred             hHHHHHHHHHHHHHHhc--CCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecH
Confidence            89999999999999754  4799999999999          4444222111    112222 23333  3445999999


Q ss_pred             HHHHHHhhhcC-c---C-CCCeEEee-c--ccccHHHHHHHHHHHhC
Q 043792          246 YVDAHICVFED-V---S-SYGRYLCF-N--HVINCNEDAMKLARMLL  284 (294)
Q Consensus       246 ~a~~i~~~~~~-~---~-~~~~~~~~-~--~~~s~~~~~~~~~~~~~  284 (294)
                      ++.+++.++.. .   . ....|+++ +  .++++.++.+.+.+.+.
T Consensus       427 vvna~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~  473 (605)
T PLN02503        427 VVNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYK  473 (605)
T ss_pred             HHHHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHh
Confidence            99999888432 1   1 12348775 4  57999999999887543

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.94  E-value=2.6e-25  Score=176.79  Aligned_cols=183  Identities=25%  Similarity=0.306  Sum_probs=140.6

Q ss_pred             EEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEecCCC
Q 043792           29 VCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSFEP  108 (294)
Q Consensus        29 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~a~~  108 (294)
                      |+|+||||++|+.++++|+++|++|++++|++++.+.          ..+++++.+|+.|++.+.++++++|+||++++.
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~----------~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~   70 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED----------SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGP   70 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH----------CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHS
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc----------ccccccceeeehhhhhhhhhhhhcchhhhhhhh
Confidence            7999999999999999999999999999999876443          358999999999999999999999999999976


Q ss_pred             CCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhH
Q 043792          109 PSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSK  188 (294)
Q Consensus       109 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK  188 (294)
                      ...           +...+.++++++++. +++|+|++||.+  .+....    .....+   ..+..     ..|...|
T Consensus        71 ~~~-----------~~~~~~~~~~a~~~~-~~~~~v~~s~~~--~~~~~~----~~~~~~---~~~~~-----~~~~~~~  124 (183)
T PF13460_consen   71 PPK-----------DVDAAKNIIEAAKKA-GVKRVVYLSSAG--VYRDPP----GLFSDE---DKPIF-----PEYARDK  124 (183)
T ss_dssp             TTT-----------HHHHHHHHHHHHHHT-TSSEEEEEEETT--GTTTCT----SEEEGG---TCGGG-----HHHHHHH
T ss_pred             hcc-----------ccccccccccccccc-ccccceeeeccc--cCCCCC----cccccc---cccch-----hhhHHHH
Confidence            553           277889999999999 999999999986  333222    100111   11111     4588888


Q ss_pred             HHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHHHHHHHHhhhcC
Q 043792          189 TLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVFED  256 (294)
Q Consensus       189 ~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~i~~~~~~  256 (294)
                      ..+|+.++    +.+++|+++||+.+||+...... +...    .+.....+|+.+|+|++++.++++
T Consensus       125 ~~~e~~~~----~~~~~~~ivrp~~~~~~~~~~~~-~~~~----~~~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  125 REAEEALR----ESGLNWTIVRPGWIYGNPSRSYR-LIKE----GGPQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             HHHHHHHH----HSTSEEEEEEESEEEBTTSSSEE-EESS----TSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred             HHHHHHHH----hcCCCEEEEECcEeEeCCCccee-EEec----cCCCCcCcCCHHHHHHHHHHHhCC
Confidence            88887764    35999999999999999833111 2111    223334599999999999998863

...

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.94  E-value=6.4e-25  Score=184.40  Aligned_cols=218  Identities=13%  Similarity=0.037  Sum_probs=154.2

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc-----
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG-----   98 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-----   98 (294)
                      .++++||||||+|+||+++++.|+++|++|++++|+++..+.+.+.+  .....++.++.+|++|.+.+.+++++     
T Consensus         5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (262)
T PRK13394          5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEI--NKAGGKAIGVAMDVTNEDAVNAGIDKVAERF   82 (262)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH--HhcCceEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            45689999999999999999999999999999999886665554432  22234678899999999988877653     


Q ss_pred             --CCEEEecCCCCCCCC----c--chhhhHhHhhHH----HHHHHHHH-HhcCCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           99 --CSGLFYSFEPPSDHS----T--YDELTAEVETMA----AHNVLEAC-AQTNTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        99 --~d~Vih~a~~~~~~~----~--~~~~~~~~n~~~----~~~ll~~~-~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                        +|+||||++......    .  ..+..+++|+.+    +.++++++ +.. +.++||++||..+.. +...    .  
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~~~~iv~~ss~~~~~-~~~~----~--  154 (262)
T PRK13394         83 GSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDD-RGGVVIYMGSVHSHE-ASPL----K--  154 (262)
T ss_pred             CCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhc-CCcEEEEEcchhhcC-CCCC----C--
Confidence              799999998754321    1  123668899999    56666666 555 678999999975321 1111    1  


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-ccc--cc-----c-ccc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YLK--GA-----A-EMY  233 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~~--~~-----~-~~~  233 (294)
                                      +.|+.+|.+.+.+++.++.+   .+++++++||+.++++....... ...  +.     . ..+
T Consensus       155 ----------------~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (262)
T PRK13394        155 ----------------SAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVM  218 (262)
T ss_pred             ----------------cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHH
Confidence                            67999999999999888766   48999999999999986321110 000  00     0 112


Q ss_pred             CC--CccccccHHHHHHHHHhhhcCcC--CCCe-EEeec
Q 043792          234 ED--GVMASVDLRFYVDAHICVFEDVS--SYGR-YLCFN  267 (294)
Q Consensus       234 ~~--~~~~~v~v~D~a~~i~~~~~~~~--~~~~-~~~~~  267 (294)
                      ..  ....|++++|++++++.++....  .+|+ |.+.+
T Consensus       219 ~~~~~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~  257 (262)
T PRK13394        219 LGKTVDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSH  257 (262)
T ss_pred             hcCCCCCCCCCHHHHHHHHHHHcCccccCCcCCEEeeCC
Confidence            11  22349999999999999987543  2455 44444

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.94  E-value=1.1e-24  Score=183.00  Aligned_cols=187  Identities=17%  Similarity=0.142  Sum_probs=140.7

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCCh---hhHHHHHh-----hccCCCCeEEEECCCCC------hhH
Q 043792           27 KTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKL---QCIEEELI-----NYNEEKKLKVFQADPFD------YHS   91 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~---~~l~~~~~-----~~~~~~~v~~~~~Dl~~------~~~   91 (294)
                      ++||+||||||+|++|+++|+.+- .+|++++|..+..   .++.+.+.     .....++++++.+|+..      ...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            579999999999999999999975 5999999976632   33333221     11345789999999973      467


Q ss_pred             HHHHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCC
Q 043792           92 LVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNW  171 (294)
Q Consensus        92 ~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~  171 (294)
                      +.++.+.+|.|||+++..+....+ .++...|+.||..+++.|... +.|.|.|+||+++..+.... .. ....+|+.+
T Consensus        81 ~~~La~~vD~I~H~gA~Vn~v~pY-s~L~~~NVlGT~evlrLa~~g-k~Kp~~yVSsisv~~~~~~~-~~-~~~~~~~~~  156 (382)
T COG3320          81 WQELAENVDLIIHNAALVNHVFPY-SELRGANVLGTAEVLRLAATG-KPKPLHYVSSISVGETEYYS-NF-TVDFDEISP  156 (382)
T ss_pred             HHHHhhhcceEEecchhhcccCcH-HHhcCcchHhHHHHHHHHhcC-CCceeEEEeeeeeccccccC-CC-ccccccccc
Confidence            888888999999999987765544 388999999999999999988 78899999999744333222 00 112222222


Q ss_pred             CChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCC
Q 043792          172 SDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDV  219 (294)
Q Consensus       172 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~  219 (294)
                      .... .....++|+.||+++|.+++....+ |++++|+|||.|-|...
T Consensus       157 ~~~~-~~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~gds~  202 (382)
T COG3320         157 TRNV-GQGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITGDSR  202 (382)
T ss_pred             cccc-cCccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeeccCc
Confidence            2211 1122288999999999999998877 99999999999999886

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.94  E-value=6.8e-25  Score=186.57  Aligned_cols=207  Identities=14%  Similarity=0.071  Sum_probs=150.8

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHh------cc-CC
Q 043792           28 TVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNAL------KG-CS  100 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~------~~-~d  100 (294)
                      +|+||||||++|++++++|+++|++|++++|++++..           ..+++.+.+|+.|++++.+++      ++ +|
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~-----------~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d   69 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA-----------GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEIS   69 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc-----------CCCCccccccCCCHHHHHHHHhcccCcCCcee
Confidence            5899999999999999999999999999999976431           126677889999999999998      56 99


Q ss_pred             EEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhc
Q 043792          101 GLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKF  180 (294)
Q Consensus       101 ~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~  180 (294)
                      .|+|+++....           ......+++++|++. +++|||++||..+. .+  .                      
T Consensus        70 ~v~~~~~~~~~-----------~~~~~~~~i~aa~~~-gv~~~V~~Ss~~~~-~~--~----------------------  112 (285)
T TIGR03649        70 AVYLVAPPIPD-----------LAPPMIKFIDFARSK-GVRRFVLLSASIIE-KG--G----------------------  112 (285)
T ss_pred             EEEEeCCCCCC-----------hhHHHHHHHHHHHHc-CCCEEEEeeccccC-CC--C----------------------
Confidence            99999874321           123456899999999 99999999986421 11  0                      


Q ss_pred             cchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCC--CCccccccc--cccCCCccccccHHHHHHHHHhhhcC
Q 043792          181 KLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTI--SNPYLKGAA--EMYEDGVMASVDLRFYVDAHICVFED  256 (294)
Q Consensus       181 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~--~~~~~~~~~--~~~~~~~~~~v~v~D~a~~i~~~~~~  256 (294)
                           ..+...|.+++.   ..+++++++||+.+|++....  ...+.++..  ...+++..+||+++|+|++++.++..
T Consensus       113 -----~~~~~~~~~l~~---~~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~  184 (285)
T TIGR03649       113 -----PAMGQVHAHLDS---LGGVEYTVLRPTWFMENFSEEFHVEAIRKENKIYSATGDGKIPFVSADDIARVAYRALTD  184 (285)
T ss_pred             -----chHHHHHHHHHh---ccCCCEEEEeccHHhhhhcccccccccccCCeEEecCCCCccCcccHHHHHHHHHHHhcC
Confidence                 011223333332   148999999999998654211  111222121  12245666799999999999999987


Q ss_pred             cCCCC-eEEe-ecccccHHHHHHHHHHHhCCCCCCC
Q 043792          257 VSSYG-RYLC-FNHVINCNEDAMKLARMLLPPSDTS  290 (294)
Q Consensus       257 ~~~~~-~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~  290 (294)
                      +...+ .|++ +++.+|+.|+++.+.+.+|++....
T Consensus       185 ~~~~~~~~~l~g~~~~s~~eia~~l~~~~g~~v~~~  220 (285)
T TIGR03649       185 KVAPNTDYVVLGPELLTYDDVAEILSRVLGRKITHV  220 (285)
T ss_pred             CCcCCCeEEeeCCccCCHHHHHHHHHHHhCCceEEE
Confidence            65444 5755 4578999999999999999886543

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.93  E-value=1.7e-24  Score=180.76  Aligned_cols=228  Identities=18%  Similarity=0.175  Sum_probs=156.2

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCC-hhHHHHHh-ccCCE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFD-YHSLVNAL-KGCSG  101 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~-~~~~~~~~-~~~d~  101 (294)
                      ..+|+|+||||||+||+++++.|+++|++|+++.|+.++...+..      ...++.++.+|++| .+.+.+.+ .++|+
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~------~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~   88 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP------QDPSLQIVRADVTEGSDKLVEAIGDDSDA   88 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc------cCCceEEEEeeCCCCHHHHHHHhhcCCCE
Confidence            346899999999999999999999999999999998764332211      12468999999998 46777777 68999


Q ss_pred             EEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhcc
Q 043792          102 LFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFK  181 (294)
Q Consensus       102 Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  181 (294)
                      |||+++.....  .....+++|..++.++++++.+. +++|||++||.+  +|+...    ..+..+..     ......
T Consensus        89 vi~~~g~~~~~--~~~~~~~~n~~~~~~ll~a~~~~-~~~~iV~iSS~~--v~g~~~----~~~~~~~~-----~~~~~~  154 (251)
T PLN00141         89 VICATGFRRSF--DPFAPWKVDNFGTVNLVEACRKA-GVTRFILVSSIL--VNGAAM----GQILNPAY-----IFLNLF  154 (251)
T ss_pred             EEECCCCCcCC--CCCCceeeehHHHHHHHHHHHHc-CCCEEEEEcccc--ccCCCc----ccccCcch-----hHHHHH
Confidence            99998764211  11133578899999999999988 889999999986  344322    11111110     000000


Q ss_pred             chhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCccccccccccCCC-ccccccHHHHHHHHHhhhcCcCCC
Q 043792          182 LWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDG-VMASVDLRFYVDAHICVFEDVSSY  260 (294)
Q Consensus       182 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~-~~~~v~v~D~a~~i~~~~~~~~~~  260 (294)
                      ..|..+|..+|++++.    .+++++++||+++++....... ...     ..+. ...+|+.+|+|++++.++.++...
T Consensus       155 ~~~~~~k~~~e~~l~~----~gi~~~iirpg~~~~~~~~~~~-~~~-----~~~~~~~~~i~~~dvA~~~~~~~~~~~~~  224 (251)
T PLN00141        155 GLTLVAKLQAEKYIRK----SGINYTIVRPGGLTNDPPTGNI-VME-----PEDTLYEGSISRDQVAEVAVEALLCPESS  224 (251)
T ss_pred             HHHHHHHHHHHHHHHh----cCCcEEEEECCCccCCCCCceE-EEC-----CCCccccCcccHHHHHHHHHHHhcChhhc
Confidence            3355678888876653    5899999999999976521110 110     0111 123899999999999999887654


Q ss_pred             C-eE-Eeec--c-cccHHHHHHHHHH
Q 043792          261 G-RY-LCFN--H-VINCNEDAMKLAR  281 (294)
Q Consensus       261 ~-~~-~~~~--~-~~s~~~~~~~~~~  281 (294)
                      + .+ ++..  . ..++.++...+++
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (251)
T PLN00141        225 YKVVEIVARADAPKRSYKDLFASIKQ  250 (251)
T ss_pred             CcEEEEecCCCCCchhHHHHHHHhhc
Confidence            4 34 3432  2 3788888877764

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.93  E-value=3.2e-25  Score=172.11  Aligned_cols=232  Identities=16%  Similarity=0.125  Sum_probs=178.4

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCC--eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCCE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGY--TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCSG  101 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~  101 (294)
                      ++||||||++|.+|++|++.+.++|.  +-.++.-+                      -.+|+++.++.+.+|+  +...
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s----------------------kd~DLt~~a~t~~lF~~ekPth   58 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS----------------------KDADLTNLADTRALFESEKPTH   58 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc----------------------ccccccchHHHHHHHhccCCce
Confidence            47999999999999999999999875  22222111                      1359999999999997  4699


Q ss_pred             EEecCCCCCCC---CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhh
Q 043792          102 LFYSFEPPSDH---STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCK  178 (294)
Q Consensus       102 Vih~a~~~~~~---~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~  178 (294)
                      |||+|+.....   ..+..+.+..|+....|++..|-+. +++++++..|+  +.|+...    ..|++|+......+..
T Consensus        59 VIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~-gv~K~vsclSt--CIfPdkt----~yPIdEtmvh~gpphp  131 (315)
T KOG1431|consen   59 VIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEH-GVKKVVSCLST--CIFPDKT----SYPIDETMVHNGPPHP  131 (315)
T ss_pred             eeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHh-chhhhhhhcce--eecCCCC----CCCCCHHHhccCCCCC
Confidence            99998775543   2333488999999999999999999 99999988887  4777766    6699998776655444


Q ss_pred             hccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc---------------ccccc-c-cccCCCcc--c
Q 043792          179 KFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP---------------YLKGA-A-EMYEDGVM--A  239 (294)
Q Consensus       179 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~---------------~~~~~-~-~~~~~~~~--~  239 (294)
                      .+ ..|+.+|+++.-.-+.|..++|..++.+-|+++|||++.....               ...|. . .+|+.|..  .
T Consensus       132 sN-~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRq  210 (315)
T KOG1431|consen  132 SN-FGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQ  210 (315)
T ss_pred             Cc-hHHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHH
Confidence            44 6799999999888899999999999999999999999654322               11222 1 56766543  3


Q ss_pred             cccHHHHHHHHHhhhcCcCCCCeEEe-ecc--cccHHHHHHHHHHHhCCCC
Q 043792          240 SVDLRFYVDAHICVFEDVSSYGRYLC-FNH--VINCNEDAMKLARMLLPPS  287 (294)
Q Consensus       240 ~v~v~D~a~~i~~~~~~~~~~~~~~~-~~~--~~s~~~~~~~~~~~~~~~~  287 (294)
                      |+|++|+|+++++++.+=..-...++ +++  ++|++|+++...++++-.-
T Consensus       211 Fiys~DLA~l~i~vlr~Y~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G  261 (315)
T KOG1431|consen  211 FIYSDDLADLFIWVLREYEGVEPIILSVGESDEVTIREAAEAVVEAVDFTG  261 (315)
T ss_pred             HhhHhHHHHHHHHHHHhhcCccceEeccCccceeEHHHHHHHHHHHhCCCc
Confidence            99999999999999976433223343 455  7999999999999887543

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=3.8e-24  Score=178.15  Aligned_cols=217  Identities=16%  Similarity=0.033  Sum_probs=154.3

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCCh-hhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKL-QCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      .+++++||||||+|+||+++++.|+++|++|+++.|+..+. +.+...  ......++.++.+|+.|.+++.++++    
T Consensus         3 ~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   80 (249)
T PRK12825          3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEA--VEALGRRAQAVQADVTDKAALEAAVAAAVE   80 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH--HHhcCCceEEEECCcCCHHHHHHHHHHHHH
Confidence            44568999999999999999999999999998877765432 222221  11234568899999999998887764    


Q ss_pred             ---cCCEEEecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHS----T--YDELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPTSH  164 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  164 (294)
                         ++|+|||+++......    .  .....++.|+.++.++++.+.    +. +.++||++||.+++ ++...    . 
T Consensus        81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~i~~SS~~~~-~~~~~----~-  153 (249)
T PRK12825         81 RFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQ-RGGRIVNISSVAGL-PGWPG----R-  153 (249)
T ss_pred             HcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEECccccC-CCCCC----c-
Confidence               4699999998644322    1  123778899999999998874    44 67899999998632 22111    1 


Q ss_pred             CCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-cccccccccCCCcccc
Q 043792          165 DFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YLKGAAEMYEDGVMAS  240 (294)
Q Consensus       165 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~  240 (294)
                                       ..|+.+|.+.+.+++.++.+   .+++++++||+.++|+....... .........  ....+
T Consensus       154 -----------------~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~--~~~~~  214 (249)
T PRK12825        154 -----------------SNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAKDAET--PLGRS  214 (249)
T ss_pred             -----------------hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhhhccC--CCCCC
Confidence                             67999999999999888765   58999999999999987432211 000000011  11228


Q ss_pred             ccHHHHHHHHHhhhcCcC--CCCe-EEeec
Q 043792          241 VDLRFYVDAHICVFEDVS--SYGR-YLCFN  267 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~~--~~~~-~~~~~  267 (294)
                      ++++|+++++.+++....  ..|+ |.+.+
T Consensus       215 ~~~~dva~~~~~~~~~~~~~~~g~~~~i~~  244 (249)
T PRK12825        215 GTPEDIARAVAFLCSDASDYITGQVIEVTG  244 (249)
T ss_pred             cCHHHHHHHHHHHhCccccCcCCCEEEeCC
Confidence            999999999999996643  3455 55544

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.93  E-value=3.8e-24  Score=191.77  Aligned_cols=233  Identities=16%  Similarity=0.160  Sum_probs=161.9

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhc-----c--CCCCeEEEECCCCChhHHHHH
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINY-----N--EEKKLKVFQADPFDYHSLVNA   95 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~-----~--~~~~v~~~~~Dl~~~~~~~~~   95 (294)
                      ..++++||||||+|+||++++++|+++|++|++++|+.++...+..++...     .  ...++.++.+|+.|.+++.++
T Consensus        77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a  156 (576)
T PLN03209         77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA  156 (576)
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence            345789999999999999999999999999999999887665544321100     0  113588999999999999999


Q ss_pred             hccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChh
Q 043792           96 LKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVN  175 (294)
Q Consensus        96 ~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~  175 (294)
                      +.++|+|||++|............+++|+.++.++++++.+. +++|||++||.++...+...          .. ....
T Consensus       157 LggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~a-gVgRIV~VSSiga~~~g~p~----------~~-~~sk  224 (576)
T PLN03209        157 LGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVA-KVNHFILVTSLGTNKVGFPA----------AI-LNLF  224 (576)
T ss_pred             hcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHh-CCCEEEEEccchhcccCccc----------cc-hhhH
Confidence            999999999998754322222366889999999999999998 88999999998632111100          00 0111


Q ss_pred             hhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCccccccccc-cCCCc-cccccHHHHHHHHHhh
Q 043792          176 LCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAAEM-YEDGV-MASVDLRFYVDAHICV  253 (294)
Q Consensus       176 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~-~~~~~-~~~v~v~D~a~~i~~~  253 (294)
                            ..|..+|..+|+++..    .|++|++||||+++++.+....   .+.... ..+.. ..++..+|+|++++.+
T Consensus       225 ------~~~~~~KraaE~~L~~----sGIrvTIVRPG~L~tp~d~~~~---t~~v~~~~~d~~~gr~isreDVA~vVvfL  291 (576)
T PLN03209        225 ------WGVLCWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE---THNLTLSEEDTLFGGQVSNLQVAELMACM  291 (576)
T ss_pred             ------HHHHHHHHHHHHHHHH----cCCCEEEEECCeecCCcccccc---ccceeeccccccCCCccCHHHHHHHHHHH
Confidence                  4577888888887754    6999999999999887532111   011111 11111 1268899999999999


Q ss_pred             hcCcC-CCCe-EEeeccc----ccHHHHHHHHH
Q 043792          254 FEDVS-SYGR-YLCFNHV----INCNEDAMKLA  280 (294)
Q Consensus       254 ~~~~~-~~~~-~~~~~~~----~s~~~~~~~~~  280 (294)
                      +.++. ..++ +-+.++.    ..+.++++.+-
T Consensus       292 asd~~as~~kvvevi~~~~~p~~~~~~~~~~ip  324 (576)
T PLN03209        292 AKNRRLSYCKVVEVIAETTAPLTPMEELLAKIP  324 (576)
T ss_pred             HcCchhccceEEEEEeCCCCCCCCHHHHHHhcc
Confidence            98664 3344 5444332    45666665543

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.93  E-value=2.8e-25  Score=178.19  Aligned_cols=228  Identities=16%  Similarity=0.138  Sum_probs=181.2

Q ss_pred             CCCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC-CChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCC
Q 043792           22 SSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNH-GKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCS  100 (294)
Q Consensus        22 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d  100 (294)
                      ++.++-.+-|+|||||+|+.+|+.|.+.|-+|++--|-. .....++    .-+....+-+...|+.|+++++++++..+
T Consensus        57 sS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lk----vmGdLGQvl~~~fd~~DedSIr~vvk~sN  132 (391)
T KOG2865|consen   57 SSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLK----VMGDLGQVLFMKFDLRDEDSIRAVVKHSN  132 (391)
T ss_pred             ccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhhee----ecccccceeeeccCCCCHHHHHHHHHhCc
Confidence            355677889999999999999999999999999998843 3333332    33455678999999999999999999999


Q ss_pred             EEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhc
Q 043792          101 GLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKF  180 (294)
Q Consensus       101 ~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~  180 (294)
                      +|||+.|-.-.....  ...++|+.++..|.+.|++. |+.|||++|+.++-+-+       .                 
T Consensus       133 VVINLIGrd~eTknf--~f~Dvn~~~aerlAricke~-GVerfIhvS~Lganv~s-------~-----------------  185 (391)
T KOG2865|consen  133 VVINLIGRDYETKNF--SFEDVNVHIAERLARICKEA-GVERFIHVSCLGANVKS-------P-----------------  185 (391)
T ss_pred             EEEEeeccccccCCc--ccccccchHHHHHHHHHHhh-ChhheeehhhccccccC-------h-----------------
Confidence            999999975544433  66789999999999999999 99999999987532111       1                 


Q ss_pred             cchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc---ccc--ccccccCCCccc---cccHHHHHHHHHh
Q 043792          181 KLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP---YLK--GAAEMYEDGVMA---SVDLRFYVDAHIC  252 (294)
Q Consensus       181 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~---~~~--~~~~~~~~~~~~---~v~v~D~a~~i~~  252 (294)
                       +-|-.+|.++|..++...    -..+|+||+.|||..+..-+.   +++  |..+.++.|+-.   .|||.|+|++|+.
T Consensus       186 -Sr~LrsK~~gE~aVrdaf----PeAtIirPa~iyG~eDrfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~Ivn  260 (391)
T KOG2865|consen  186 -SRMLRSKAAGEEAVRDAF----PEATIIRPADIYGTEDRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVN  260 (391)
T ss_pred             -HHHHHhhhhhHHHHHhhC----CcceeechhhhcccchhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHH
Confidence             568899999999998753    456999999999999655443   222  233566666433   8999999999999


Q ss_pred             hhcCcCCCCe-E-EeecccccHHHHHHHHHHHhCC
Q 043792          253 VFEDVSSYGR-Y-LCFNHVINCNEDAMKLARMLLP  285 (294)
Q Consensus       253 ~~~~~~~~~~-~-~~~~~~~s~~~~~~~~~~~~~~  285 (294)
                      +++++...|+ | ++++..+++.|+++++-+....
T Consensus       261 AvkDp~s~Gktye~vGP~~yql~eLvd~my~~~~~  295 (391)
T KOG2865|consen  261 AVKDPDSMGKTYEFVGPDRYQLSELVDIMYDMARE  295 (391)
T ss_pred             hccCccccCceeeecCCchhhHHHHHHHHHHHHhh
Confidence            9999988775 8 5566779999999998876644

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.4e-24  Score=180.92  Aligned_cols=223  Identities=15%  Similarity=0.102  Sum_probs=156.1

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC-hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK-LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      .++++++||||+|+||+++++.|+++|++|++++|+... .+.+..++  .....++.++.+|++|++++.++++     
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEI--EAAGGRASAVGADLTDEESVAALMDTAREE   81 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHH--HhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            456899999999999999999999999999999987542 33333321  1123467889999999998877765     


Q ss_pred             --cCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCCh
Q 043792           98 --GCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDV  174 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~  174 (294)
                        ++|+|||+++............+++|+.++.++++++.+. ....++|++||.++...+...          ..+  .
T Consensus        82 ~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~----------~~~--~  149 (248)
T PRK07806         82 FGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTVK----------TMP--E  149 (248)
T ss_pred             CCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcccc----------CCc--c
Confidence              4799999997643332233467889999999999999865 122589999996432211101          000  0


Q ss_pred             hhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccc-ccccc---CCCccccccHHHHH
Q 043792          175 NLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKG-AAEMY---EDGVMASVDLRFYV  247 (294)
Q Consensus       175 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~-~~~~~---~~~~~~~v~v~D~a  247 (294)
                      .      ..|+.+|.+.|.+++.++.+   .++++++++|+.+-++....   +... .+...   ......+++++|+|
T Consensus       150 ~------~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~dva  220 (248)
T PRK07806        150 Y------EPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTAT---LLNRLNPGAIEARREAAGKLYTVSEFA  220 (248)
T ss_pred             c------cHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhh---hhccCCHHHHHHHHhhhcccCCHHHHH
Confidence            1      67999999999999998765   47999999999887664211   1111 11000   00112489999999


Q ss_pred             HHHHhhhcCcCCCCe-EEeeccc
Q 043792          248 DAHICVFEDVSSYGR-YLCFNHV  269 (294)
Q Consensus       248 ~~i~~~~~~~~~~~~-~~~~~~~  269 (294)
                      ++++.+++....+|+ |++.++.
T Consensus       221 ~~~~~l~~~~~~~g~~~~i~~~~  243 (248)
T PRK07806        221 AEVARAVTAPVPSGHIEYVGGAD  243 (248)
T ss_pred             HHHHHHhhccccCccEEEecCcc
Confidence            999999987766676 6666654

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.93  E-value=3.7e-24  Score=181.15  Aligned_cols=228  Identities=17%  Similarity=0.040  Sum_probs=165.0

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------c
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------G   98 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~   98 (294)
                      +++|+||||+|+||+++++.|+++|++|++++|+.+..+.+..   .  ....+.++.+|++|.+++.++++       .
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~---~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAE---K--YGDRLLPLALDVTDRAAVFAAVETAVEHFGR   77 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---h--ccCCeeEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999998765544433   1  13467888999999988877765       4


Q ss_pred             CCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHH----HhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           99 CSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEAC----AQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                      +|+||||++......      ...++.+++|+.++.++++++    ++. +.+++|++||.+++.... .    .     
T Consensus        78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~-~----~-----  146 (275)
T PRK08263         78 LDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQ-RSGHIIQISSIGGISAFP-M----S-----  146 (275)
T ss_pred             CCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEEcChhhcCCCC-C----c-----
Confidence            699999998754321      122378999999998888876    344 567999999975322111 1    1     


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc---ccccccc---ccCC--Cc
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP---YLKGAAE---MYED--GV  237 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~---~~~~~~~---~~~~--~~  237 (294)
                                   ..|+.+|.+.+.+.+.++.+   +|++++++|||.+.++.......   .......   ...+  ..
T Consensus       147 -------------~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (275)
T PRK08263        147 -------------GIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSE  213 (275)
T ss_pred             -------------cHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHh
Confidence                         67999999999999888765   68999999999998765321110   0000000   0000  11


Q ss_pred             ccc-ccHHHHHHHHHhhhcCcCCCCeEEeec--ccccHHHHHHHHHHH
Q 043792          238 MAS-VDLRFYVDAHICVFEDVSSYGRYLCFN--HVINCNEDAMKLARM  282 (294)
Q Consensus       238 ~~~-v~v~D~a~~i~~~~~~~~~~~~~~~~~--~~~s~~~~~~~~~~~  282 (294)
                      ..+ ++++|+|++++.++..+...++|++..  ..+++.++.+.+.+.
T Consensus       214 ~~~~~~p~dva~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (275)
T PRK08263        214 RSVDGDPEAAAEALLKLVDAENPPLRLFLGSGVLDLAKADYERRLATW  261 (275)
T ss_pred             ccCCCCHHHHHHHHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHH
Confidence            125 899999999999999877767776654  458888888888764

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.93  E-value=9.7e-24  Score=178.73  Aligned_cols=217  Identities=15%  Similarity=0.045  Sum_probs=155.2

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------   97 (294)
                      .+++|+||||+|+||+++++.|+++|++|++++|+.++.+.+..   .  ...++.++.+|++|.+++.++++       
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~---~--~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~   77 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEA---L--HPDRALARLLDVTDFDAIDAVVADAEATFG   77 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHh---h--cCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Confidence            35789999999999999999999999999999998765544433   1  23468889999999998887776       


Q ss_pred             cCCEEEecCCCCCCCCc---c---hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           98 GCSGLFYSFEPPSDHST---Y---DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~~---~---~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                      .+|+|||+|+.......   .   ....+++|+.++.++++++...   .+.+++|++||.++..... .    .     
T Consensus        78 ~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~-~----~-----  147 (277)
T PRK06180         78 PIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMP-G----I-----  147 (277)
T ss_pred             CCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCC-C----c-----
Confidence            47999999987543211   1   1366899999999999986432   2557999999976432111 1    1     


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc----ccccccccc--------
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP----YLKGAAEMY--------  233 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~----~~~~~~~~~--------  233 (294)
                                   ..|+.+|.+.|.+++.++.+   .|++++++|||.+.++.......    ........+        
T Consensus       148 -------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (277)
T PRK06180        148 -------------GYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQARE  214 (277)
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHH
Confidence                         67999999999999888765   48999999999998764211110    000000000        


Q ss_pred             CCCccccccHHHHHHHHHhhhcCcCCCCeEEeeccc
Q 043792          234 EDGVMASVDLRFYVDAHICVFEDVSSYGRYLCFNHV  269 (294)
Q Consensus       234 ~~~~~~~v~v~D~a~~i~~~~~~~~~~~~~~~~~~~  269 (294)
                      ......+..++|+|++++.++..+....+|+.+.+.
T Consensus       215 ~~~~~~~~~~~dva~~~~~~l~~~~~~~~~~~g~~~  250 (277)
T PRK06180        215 AKSGKQPGDPAKAAQAILAAVESDEPPLHLLLGSDA  250 (277)
T ss_pred             hhccCCCCCHHHHHHHHHHHHcCCCCCeeEeccHHH
Confidence            011122678999999999999877655567666543

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.93  E-value=5.3e-24  Score=177.65  Aligned_cols=218  Identities=17%  Similarity=0.033  Sum_probs=155.6

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++|+||||+|+||+++++.|+++|++|++++|+.++...+.+.+  .....++.++.+|+.|.+++.++++      
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l--~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELV--EAAGGKARARQVDVRDRAALKAAVAAGVEDF   81 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            35689999999999999999999999999999999876554443322  2233458899999999998888875      


Q ss_pred             -cCCEEEecCCCCCCC----Cc--chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDH----ST--YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~----~~--~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                       .+|+|||+++.....    ..  .....++.|+.++.++++++...   .+.++||++||..+...+...    .    
T Consensus        82 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~----~----  153 (251)
T PRK12826         82 GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPG----L----  153 (251)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCC----c----
Confidence             579999999875531    11  12377999999999999987532   256799999997532011110    1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCcccccc-cccc-CC-Cccccc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGA-AEMY-ED-GVMASV  241 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~-~~~~-~~-~~~~~v  241 (294)
                                    ..|+.+|.+.+.+++.++.+   .+++++++||+.++|+......   ... ...+ .. ....++
T Consensus       154 --------------~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  216 (251)
T PRK12826        154 --------------AHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLG---DAQWAEAIAAAIPLGRLG  216 (251)
T ss_pred             --------------cHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcC---chHHHHHHHhcCCCCCCc
Confidence                          67999999999999988765   4899999999999998732211   110 0001 01 111389


Q ss_pred             cHHHHHHHHHhhhcCcCC--CCe-EEeecc
Q 043792          242 DLRFYVDAHICVFEDVSS--YGR-YLCFNH  268 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~~~--~~~-~~~~~~  268 (294)
                      +++|+|++++.++.....  .|+ +.+.++
T Consensus       217 ~~~dva~~~~~l~~~~~~~~~g~~~~~~~g  246 (251)
T PRK12826        217 EPEDIAAAVLFLASDEARYITGQTLPVDGG  246 (251)
T ss_pred             CHHHHHHHHHHHhCccccCcCCcEEEECCC
Confidence            999999999998865432  455 555544

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.93  E-value=8.5e-24  Score=177.14  Aligned_cols=217  Identities=14%  Similarity=0.047  Sum_probs=153.2

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------   97 (294)
                      ++++|+||||+|+||++++++|+++|++|++++|++++.+.+..++  .....++.++.+|+.|++++.++++       
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   80 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEAL--QKAGGKAIGVAMDVTDEEAINAGIDYAVETFG   80 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH--HhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3579999999999999999999999999999999887665554432  2234578899999999998888775       


Q ss_pred             cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHH----HhcCCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEAC----AQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                      .+|+|||+++.......      ..+..+++|+.++.++++.+    ++. +.++||++||..+. ++...    .    
T Consensus        81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~iss~~~~-~~~~~----~----  150 (258)
T PRK12429         81 GVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQ-GGGRIINMASVHGL-VGSAG----K----  150 (258)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-CCeEEEEEcchhhc-cCCCC----c----
Confidence            47999999986543211      11266788999965555554    445 67899999997532 22211    1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-ccc--ccc------cccC-
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YLK--GAA------EMYE-  234 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~~--~~~------~~~~-  234 (294)
                                    +.|+.+|.+.+.+.+.++.+   .+++++++||+.++++....... ...  +..      ..+. 
T Consensus       151 --------------~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (258)
T PRK12429        151 --------------AAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLP  216 (258)
T ss_pred             --------------chhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhc
Confidence                          67999999999998887765   37999999999999887421110 000  111      0111 


Q ss_pred             -CCccccccHHHHHHHHHhhhcCcC--CCCe-EEeec
Q 043792          235 -DGVMASVDLRFYVDAHICVFEDVS--SYGR-YLCFN  267 (294)
Q Consensus       235 -~~~~~~v~v~D~a~~i~~~~~~~~--~~~~-~~~~~  267 (294)
                       .....|++++|+|++++.++....  .+|+ |.+.+
T Consensus       217 ~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~  253 (258)
T PRK12429        217 LVPQKRFTTVEEIADYALFLASFAAKGVTGQAWVVDG  253 (258)
T ss_pred             cCCccccCCHHHHHHHHHHHcCccccCccCCeEEeCC
Confidence             122349999999999999987543  3466 44443

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.92  E-value=5e-24  Score=178.23  Aligned_cols=216  Identities=14%  Similarity=0.062  Sum_probs=152.2

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------c
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------G   98 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~   98 (294)
                      +++||||||+|+||+++++.|+++|++|++++|+.+..+.+..++  .....++.++.+|+.|.+++.++++       +
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVA--TDAGGSVIYLVADVTKEDEIADMIAAAAAEFGG   78 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            368999999999999999999999999999999876655554422  1123468899999999997765543       5


Q ss_pred             CCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHH----HhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           99 CSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEAC----AQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                      +|+|||+++.......      ..+..+..|+.++..+++++    ++. +++++|++||.+++. +...    .     
T Consensus        79 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~~v~~ss~~~~~-~~~~----~-----  147 (255)
T TIGR01963        79 LDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQ-GWGRIINIASAHGLV-ASPF----K-----  147 (255)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEEcchhhcC-CCCC----C-----
Confidence            7999999987543211      12366789999988888876    444 678999999975322 2111    1     


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc--cc-cccc-------cc-cC
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP--YL-KGAA-------EM-YE  234 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~--~~-~~~~-------~~-~~  234 (294)
                                   ..|+.+|.+.+.+++.++.+   .+++++++||+.++++.......  .. .+..       .. ..
T Consensus       148 -------------~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (255)
T TIGR01963       148 -------------SAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPG  214 (255)
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHcc
Confidence                         67999999999999887765   38999999999999886211000  00 0000       00 12


Q ss_pred             CCccccccHHHHHHHHHhhhcCc--CCCCe-EEeec
Q 043792          235 DGVMASVDLRFYVDAHICVFEDV--SSYGR-YLCFN  267 (294)
Q Consensus       235 ~~~~~~v~v~D~a~~i~~~~~~~--~~~~~-~~~~~  267 (294)
                      .....+++++|+|++++.++...  ...|+ |++.+
T Consensus       215 ~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~  250 (255)
T TIGR01963       215 QPTKRFVTVDEVAETALFLASDAAAGITGQAIVLDG  250 (255)
T ss_pred             CccccCcCHHHHHHHHHHHcCccccCccceEEEEcC
Confidence            22334999999999999999764  23455 55544

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.92  E-value=9e-24  Score=214.28  Aligned_cols=256  Identities=17%  Similarity=0.101  Sum_probs=175.3

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCC----CeEEEEecCCCChhhHH---HHHhh-----ccCCCCeEEEECCCCC----
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRG----YTVHAALHNHGKLQCIE---EELIN-----YNEEKKLKVFQADPFD----   88 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~l~---~~~~~-----~~~~~~v~~~~~Dl~~----   88 (294)
                      ..++|+|||||||+|+++++.|++++    ++|+++.|..+....+.   ..+..     .....+++++.+|+.+    
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            35799999999999999999999987    89999999765433221   11000     0112378999999974    


Q ss_pred             --hhHHHHHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCC-----
Q 043792           89 --YHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNP-----  161 (294)
Q Consensus        89 --~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~-----  161 (294)
                        .+.+.++..++|+|||+|+....... .......|+.|+.+++++|.+. ++++|+|+||.+++  +...+.+     
T Consensus      1050 l~~~~~~~l~~~~d~iiH~Aa~~~~~~~-~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~vSS~~v~--~~~~~~~~~~~~ 1125 (1389)
T TIGR03443      1050 LSDEKWSDLTNEVDVIIHNGALVHWVYP-YSKLRDANVIGTINVLNLCAEG-KAKQFSFVSSTSAL--DTEYYVNLSDEL 1125 (1389)
T ss_pred             cCHHHHHHHHhcCCEEEECCcEecCccC-HHHHHHhHHHHHHHHHHHHHhC-CCceEEEEeCeeec--Ccccccchhhhh
Confidence              45677777889999999998764333 2355568999999999999988 88999999998743  2111000     


Q ss_pred             ---CCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-------cccccc-
Q 043792          162 ---TSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-------YLKGAA-  230 (294)
Q Consensus       162 ---~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-------~~~~~~-  230 (294)
                         ....+.|+.+..+.. ....+.|+.+|+++|.+++.+.. .|++++++||+.|||+.......       ++++.. 
T Consensus      1126 ~~~~~~~~~e~~~~~~~~-~~~~~~Y~~sK~~aE~l~~~~~~-~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~ 1203 (1389)
T TIGR03443      1126 VQAGGAGIPESDDLMGSS-KGLGTGYGQSKWVAEYIIREAGK-RGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQ 1203 (1389)
T ss_pred             hhccCCCCCccccccccc-ccCCCChHHHHHHHHHHHHHHHh-CCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHH
Confidence               011234443322211 11126799999999999998765 49999999999999996443211       222211 


Q ss_pred             -cccCC--CccccccHHHHHHHHHhhhcCcCC--CC-eEEeec-ccccHHHHHHHHHHHhCCCC
Q 043792          231 -EMYED--GVMASVDLRFYVDAHICVFEDVSS--YG-RYLCFN-HVINCNEDAMKLARMLLPPS  287 (294)
Q Consensus       231 -~~~~~--~~~~~v~v~D~a~~i~~~~~~~~~--~~-~~~~~~-~~~s~~~~~~~~~~~~~~~~  287 (294)
                       ..+++  +...|++|+|+|++++.++..+..  .+ .|++.+ ..+++.++++.+.+ .|.+.
T Consensus      1204 ~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~-~g~~~ 1266 (1389)
T TIGR03443      1204 LGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKT-YGYDV 1266 (1389)
T ss_pred             hCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHH-hCCCC
Confidence             22333  234599999999999999876532  22 365654 46899999999975 45443

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.92  E-value=3.1e-24  Score=172.26  Aligned_cols=250  Identities=14%  Similarity=0.066  Sum_probs=191.9

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhh----HHHHHhhccCCCCeEEEECCCCChhHHHHHhcc--
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQC----IEEELINYNEEKKLKVFQADPFDYHSLVNALKG--   98 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--   98 (294)
                      ++|+.||||-||+-|+.|++.|+++||+|.++.|+.+....    +.+.  ......++..+.+|++|...+..+++.  
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~--~~~~~~~l~l~~gDLtD~~~l~r~l~~v~   78 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYED--PHLNDPRLHLHYGDLTDSSNLLRILEEVQ   78 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccc--cccCCceeEEEeccccchHHHHHHHHhcC
Confidence            36899999999999999999999999999999986443221    2220  112344588999999999999999974  


Q ss_pred             CCEEEecCCCCCCCCcchh--hhHhHhhHHHHHHHHHHHhcCC-CcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChh
Q 043792           99 CSGLFYSFEPPSDHSTYDE--LTAEVETMAAHNVLEACAQTNT-VDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVN  175 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~~~~~--~~~~~n~~~~~~ll~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~  175 (294)
                      .|-|+|+|+......+.++  ...+++..|+.+|+++++..+. --||...||+  ..||...    ..|.+|.+|..|.
T Consensus        79 PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStS--E~fG~v~----~~pq~E~TPFyPr  152 (345)
T COG1089          79 PDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTS--ELYGLVQ----EIPQKETTPFYPR  152 (345)
T ss_pred             chhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccH--HhhcCcc----cCccccCCCCCCC
Confidence            6999999999877666543  7788899999999999998722 2478888887  5888777    7799999999988


Q ss_pred             hhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc----------cccccc-c-ccCC--Cccccc
Q 043792          176 LCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP----------YLKGAA-E-MYED--GVMASV  241 (294)
Q Consensus       176 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~----------~~~~~~-~-~~~~--~~~~~v  241 (294)
                            ++|+.+|..+--+...|.+.+|+-.+.-..+|--+|......-          +..|.. . -.++  ....|-
T Consensus       153 ------SPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG  226 (345)
T COG1089         153 ------SPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWG  226 (345)
T ss_pred             ------CHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEecccccccccc
Confidence                  9999999999999999999999887765555554554211110          333433 1 2232  344499


Q ss_pred             cHHHHHHHHHhhhcCcCCCCeE-EeecccccHHHHHHHHHHHhCCCCCC
Q 043792          242 DLRFYVDAHICVFEDVSSYGRY-LCFNHVINCNEDAMKLARMLLPPSDT  289 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~  289 (294)
                      |+.|.++++...++.+.. ..| +.+++..|++|+++...+..|.++.+
T Consensus       227 ~A~DYVe~mwlmLQq~~P-ddyViATg~t~sVrefv~~Af~~~g~~l~w  274 (345)
T COG1089         227 HAKDYVEAMWLMLQQEEP-DDYVIATGETHSVREFVELAFEMVGIDLEW  274 (345)
T ss_pred             chHHHHHHHHHHHccCCC-CceEEecCceeeHHHHHHHHHHHcCceEEE
Confidence            999999999999988764 346 56788899999999999999966553

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2e-23  Score=176.79  Aligned_cols=235  Identities=15%  Similarity=0.068  Sum_probs=163.5

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++.......++.++.+|+.|++++.++++      
T Consensus         5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (276)
T PRK05875          5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH   84 (276)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            34689999999999999999999999999999999866554443322111112468889999999998887765      


Q ss_pred             -cCCEEEecCCCCCC---C--Ccc--hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSD---H--STY--DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 -~~d~Vih~a~~~~~---~--~~~--~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                       .+|+|||+++....   .  ...  ....+++|+.++.++++++.+.   .+..+||++||.....  ...    .   
T Consensus        85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~----~---  155 (276)
T PRK05875         85 GRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASN--THR----W---  155 (276)
T ss_pred             CCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcC--CCC----C---
Confidence             57999999985421   1  111  1367889999999998877654   1345899999975311  100    0   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccc---ccc-CCCccc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAA---EMY-EDGVMA  239 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~---~~~-~~~~~~  239 (294)
                              .      +.|+.+|.+.|.+++.++.+.   +++++++||+.+.++....   ......   ... ......
T Consensus       156 --------~------~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~---~~~~~~~~~~~~~~~~~~~  218 (276)
T PRK05875        156 --------F------GAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAP---ITESPELSADYRACTPLPR  218 (276)
T ss_pred             --------C------cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccc---cccCHHHHHHHHcCCCCCC
Confidence                    0      679999999999999988764   6999999999997765211   111111   001 111122


Q ss_pred             cccHHHHHHHHHhhhcCcCC--CCe-EEeecc-cc----cHHHHHHHHHHHhC
Q 043792          240 SVDLRFYVDAHICVFEDVSS--YGR-YLCFNH-VI----NCNEDAMKLARMLL  284 (294)
Q Consensus       240 ~v~v~D~a~~i~~~~~~~~~--~~~-~~~~~~-~~----s~~~~~~~~~~~~~  284 (294)
                      +++++|+|++++.++..+..  .|+ +.+.++ .+    +..|+++.+.+..+
T Consensus       219 ~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  271 (276)
T PRK05875        219 VGEVEDVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADG  271 (276)
T ss_pred             CcCHHHHHHHHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHH
Confidence            78899999999999976543  355 555443 33    77888877776544

>PRK09135 pteridine reductase; Provisional

Probab=99.92  E-value=1.5e-23  Score=174.72  Aligned_cols=220  Identities=15%  Similarity=0.077  Sum_probs=148.0

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC-hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK-LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      .++++||||||+|+||++++++|+++|++|++++|+... .+.+...+. ......+.++.+|++|.+++..+++     
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   82 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELN-ALRPGSAAALQADLLDPDALPELVAACVAA   82 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH-hhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            445899999999999999999999999999999986432 333322110 1112357889999999998888776     


Q ss_pred             --cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                        ++|+|||+++......      ...+..+++|+.++.++++++.+.  .....++++++..+                
T Consensus        83 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~----------------  146 (249)
T PRK09135         83 FGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHA----------------  146 (249)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhh----------------
Confidence              4799999998643211      112378889999999999998653  12245666655321                


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc--CCeEEEEecCceeCCCCCCCCc-cccccccccCCCccccccHH
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR--GISMVSINGGLVMGPDVTISNP-YLKGAAEMYEDGVMASVDLR  244 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~v~v~  244 (294)
                       ..+..+.      +.|+.+|.++|.+++.++.+.  +++++++||+.++|+....... ..... .........+.+++
T Consensus       147 -~~~~~~~------~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  218 (249)
T PRK09135        147 -ERPLKGY------PVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEARQA-ILARTPLKRIGTPE  218 (249)
T ss_pred             -cCCCCCc------hhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHHHH-HHhcCCcCCCcCHH
Confidence             0111112      689999999999999998775  5999999999999998432111 00000 00011111155789


Q ss_pred             HHHHHHHhhhcCc-CCCCe-EEeecc
Q 043792          245 FYVDAHICVFEDV-SSYGR-YLCFNH  268 (294)
Q Consensus       245 D~a~~i~~~~~~~-~~~~~-~~~~~~  268 (294)
                      |+|+++..++... ...|. |++.++
T Consensus       219 d~a~~~~~~~~~~~~~~g~~~~i~~g  244 (249)
T PRK09135        219 DIAEAVRFLLADASFITGQILAVDGG  244 (249)
T ss_pred             HHHHHHHHHcCccccccCcEEEECCC
Confidence            9999997666443 23454 666554

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.92  E-value=9.8e-24  Score=179.00  Aligned_cols=218  Identities=18%  Similarity=0.078  Sum_probs=153.9

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------   97 (294)
                      ++++||||||+|+||+++++.|+++|++|++++|+++..+.+.+++.......++.++.+|++|++++.+ ++       
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~   80 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG   80 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence            3578999999999999999999999999999999877665554422111223478899999999988766 43       


Q ss_pred             cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHH----HhcCCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEAC----AQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                      .+|+||||++.......      ..++.+++|+.++.++++++    ++. +.++||++||.++ .++...    .    
T Consensus        81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~vsS~~~-~~~~~~----~----  150 (280)
T PRK06914         81 RIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQ-KSGKIINISSISG-RVGFPG----L----  150 (280)
T ss_pred             CeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEECcccc-cCCCCC----C----
Confidence            46999999987543211      12367889999998888885    444 5679999999753 222211    1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHH---hcCCeEEEEecCceeCCCCCCCCcc----ccc-cc---------
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAM---DRGISMVSINGGLVMGPDVTISNPY----LKG-AA---------  230 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~---~~~~~~~ilrp~~i~G~~~~~~~~~----~~~-~~---------  230 (294)
                                    ..|+.+|.+.+.+++.++.   .++++++++|||.++++........    ... ..         
T Consensus       151 --------------~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (280)
T PRK06914        151 --------------SPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQ  216 (280)
T ss_pred             --------------chhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHH
Confidence                          6799999999999988873   4589999999999988742211100    000 00         


Q ss_pred             cccCCCccccccHHHHHHHHHhhhcCcCCCCeEEeec
Q 043792          231 EMYEDGVMASVDLRFYVDAHICVFEDVSSYGRYLCFN  267 (294)
Q Consensus       231 ~~~~~~~~~~v~v~D~a~~i~~~~~~~~~~~~~~~~~  267 (294)
                      .........+++++|+|++++.++.++.....|++++
T Consensus       217 ~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~  253 (280)
T PRK06914        217 KHINSGSDTFGNPIDVANLIVEIAESKRPKLRYPIGK  253 (280)
T ss_pred             HHHhhhhhccCCHHHHHHHHHHHHcCCCCCcccccCC
Confidence            0001122237899999999999998876654566653

>PRK12320 hypothetical protein; Provisional

Probab=99.92  E-value=6.8e-24  Score=195.54  Aligned_cols=199  Identities=13%  Similarity=0.054  Sum_probs=144.9

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEecC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSF  106 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~a  106 (294)
                      ||||||||+||||++|++.|+++|++|++++|.....           ...+++++.+|+++.. +.+++.++|+|||+|
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~-----------~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLA   68 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA-----------LDPRVDYVCASLRNPV-LQELAGEADAVIHLA   68 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc-----------ccCCceEEEccCCCHH-HHHHhcCCCEEEEcC
Confidence            5899999999999999999999999999999865321           1236889999999985 788888999999999


Q ss_pred             CCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHh
Q 043792          107 EPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGL  186 (294)
Q Consensus       107 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~  186 (294)
                      +....      ....+|+.++.|++++|++. ++ ++||+||..    |...                        .|. 
T Consensus        69 a~~~~------~~~~vNv~Gt~nLleAA~~~-Gv-RiV~~SS~~----G~~~------------------------~~~-  111 (699)
T PRK12320         69 PVDTS------APGGVGITGLAHVANAAARA-GA-RLLFVSQAA----GRPE------------------------LYR-  111 (699)
T ss_pred             ccCcc------chhhHHHHHHHHHHHHHHHc-CC-eEEEEECCC----CCCc------------------------ccc-
Confidence            86421      12358999999999999998 76 799999852    2111                        122 


Q ss_pred             hHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCC-ccccccc-cccCCCccccccHHHHHHHHHhhhcCcCCCCeEE
Q 043792          187 SKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISN-PYLKGAA-EMYEDGVMASVDLRFYVDAHICVFEDVSSYGRYL  264 (294)
Q Consensus       187 sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~-~~~~~~~-~~~~~~~~~~v~v~D~a~~i~~~~~~~~~~~~~~  264 (294)
                         .+|.++..    ++++++++|++++||+...... .++.... .........++|++|++++++.+++.+. .|.|+
T Consensus       112 ---~aE~ll~~----~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~pI~vIyVdDvv~alv~al~~~~-~GiyN  183 (699)
T PRK12320        112 ---QAETLVST----GWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSARPIRVLHLDDLVRFLVLALNTDR-NGVVD  183 (699)
T ss_pred             ---HHHHHHHh----cCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHcCCceEEEEHHHHHHHHHHHHhCCC-CCEEE
Confidence               35555443    4699999999999999643211 0110000 1111222336899999999999997643 45776


Q ss_pred             ee-cccccHHHHHHHHHHH
Q 043792          265 CF-NHVINCNEDAMKLARM  282 (294)
Q Consensus       265 ~~-~~~~s~~~~~~~~~~~  282 (294)
                      ++ ++.+|+.|+++.+...
T Consensus       184 IG~~~~~Si~el~~~i~~~  202 (699)
T PRK12320        184 LATPDTTNVVTAWRLLRSV  202 (699)
T ss_pred             EeCCCeeEHHHHHHHHHHh
Confidence            65 5679999998888764

>PRK06182 short chain dehydrogenase; Validated

Probab=99.92  E-value=1.8e-23  Score=176.67  Aligned_cols=212  Identities=21%  Similarity=0.154  Sum_probs=150.3

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------   97 (294)
                      ++++|+||||+|+||++++++|+++|++|++++|+.++.+.+..        .++.++.+|++|.+++.++++       
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~--------~~~~~~~~Dv~~~~~~~~~~~~~~~~~~   73 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS--------LGVHPLSLDVTDEASIKAAVDTIIAEEG   73 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh--------CCCeEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            36899999999999999999999999999999998755443332        258899999999999888776       


Q ss_pred             cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHH----HHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLE----ACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~----~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                      ++|+|||+++......      ...+..+++|+.++.++++    .+++. +.+++|++||.++..+....         
T Consensus        74 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~g~iv~isS~~~~~~~~~~---------  143 (273)
T PRK06182         74 RIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQ-RSGRIINISSMGGKIYTPLG---------  143 (273)
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhc-CCCEEEEEcchhhcCCCCCc---------
Confidence            6799999998754321      1123778999988655554    55555 66799999997533322211         


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-cccccc-cc----------
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YLKGAA-EM----------  232 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~~~~~-~~----------  232 (294)
                                    ..|+.+|.+.+.+.+.++.+   ++++++++|||.+.++....... +..... ..          
T Consensus       144 --------------~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (273)
T PRK06182        144 --------------AWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAA  209 (273)
T ss_pred             --------------cHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHH
Confidence                          57999999999988877644   58999999999998875321111 111000 00          


Q ss_pred             -cCC--CccccccHHHHHHHHHhhhcCcCCCCeEEeecc
Q 043792          233 -YED--GVMASVDLRFYVDAHICVFEDVSSYGRYLCFNH  268 (294)
Q Consensus       233 -~~~--~~~~~v~v~D~a~~i~~~~~~~~~~~~~~~~~~  268 (294)
                       +..  ....+.+++|+|++++.++........|+++..
T Consensus       210 ~~~~~~~~~~~~~~~~vA~~i~~~~~~~~~~~~~~~g~~  248 (273)
T PRK06182        210 SMRSTYGSGRLSDPSVIADAISKAVTARRPKTRYAVGFG  248 (273)
T ss_pred             HHHHhhccccCCCHHHHHHHHHHHHhCCCCCceeecCcc
Confidence             000  112277999999999999986544445665443

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.92  E-value=3.6e-23  Score=164.45  Aligned_cols=207  Identities=15%  Similarity=0.121  Sum_probs=158.1

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ....|.++|||||+.||..+++.|.++|++|++..|+.++.+.+..++.   . ..+..+..|++|.+++..+++     
T Consensus         3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~---~-~~~~~~~~DVtD~~~~~~~i~~~~~~   78 (246)
T COG4221           3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIG---A-GAALALALDVTDRAAVEAAIEALPEE   78 (246)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhc---c-CceEEEeeccCCHHHHHHHHHHHHHh
Confidence            3456899999999999999999999999999999999999988887431   1 468899999999988666553     


Q ss_pred             --cCCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                        ++|++|||||......-.      .+.++++|+.|..+..+++...   .+..++|++||+++.......        
T Consensus        79 ~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~--------  150 (246)
T COG4221          79 FGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGG--------  150 (246)
T ss_pred             hCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCC--------
Confidence              589999999986653222      1389999999999999887644   244699999998743333223        


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccc----cccCCCccc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAA----EMYEDGVMA  239 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~----~~~~~~~~~  239 (294)
                                     +.|+.+|++...+...+..+.   +++++.+-||.+-........  .+|..    .++.+.  .
T Consensus       151 ---------------~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~--~~g~~~~~~~~y~~~--~  211 (246)
T COG4221         151 ---------------AVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVR--FEGDDERADKVYKGG--T  211 (246)
T ss_pred             ---------------ccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceeccccc--CCchhhhHHHHhccC--C
Confidence                           789999999999998888774   799999999999543311111  11111    222222  2


Q ss_pred             cccHHHHHHHHHhhhcCcCCC
Q 043792          240 SVDLRFYVDAHICVFEDVSSY  260 (294)
Q Consensus       240 ~v~v~D~a~~i~~~~~~~~~~  260 (294)
                      ++..+|+|+++++++..+..-
T Consensus       212 ~l~p~dIA~~V~~~~~~P~~v  232 (246)
T COG4221         212 ALTPEDIAEAVLFAATQPQHV  232 (246)
T ss_pred             CCCHHHHHHHHHHHHhCCCcc
Confidence            889999999999999988763

>PRK06194 hypothetical protein; Provisional

Probab=99.92  E-value=5e-23  Score=175.30  Aligned_cols=169  Identities=15%  Similarity=0.021  Sum_probs=126.6

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++||||||+|+||++++++|+++|++|++++|+.+..+....++  ...+.++.++.+|++|.+++.++++      
T Consensus         4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~   81 (287)
T PRK06194          4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAEL--RAQGAEVLGVRTDVSDAAQVEALADAALERF   81 (287)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH--HhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            45689999999999999999999999999999999876555444422  1223468889999999999988876      


Q ss_pred             -cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHH----HhcCCC------cEEEEecCcceeeeCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEAC----AQTNTV------DKVVFTSSLTAVVWNNHRDN  160 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~----~~~~~~------~~~v~~Ss~~~~~~~~~~~~  160 (294)
                       .+|+|||||+......      ...+..+++|+.++.++++++    .+. +.      .++|++||.+++. +...  
T Consensus        82 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~~~~~~~g~iv~~sS~~~~~-~~~~--  157 (287)
T PRK06194         82 GAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAA-AEKDPAYEGHIVNTASMAGLL-APPA--  157 (287)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc-CCCCCCCCeEEEEeCChhhcc-CCCC--
Confidence             3799999999855421      111367899999999987774    333 22      5899999986332 1111  


Q ss_pred             CCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc-----CCeEEEEecCceeCCC
Q 043792          161 PTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR-----GISMVSINGGLVMGPD  218 (294)
Q Consensus       161 ~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~ilrp~~i~G~~  218 (294)
                        .                  ..|+.+|.+.+.+++.++.+.     ++++.++.|+.+..+.
T Consensus       158 --~------------------~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~  200 (287)
T PRK06194        158 --M------------------GIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGI  200 (287)
T ss_pred             --C------------------cchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcc
Confidence              1                  679999999999999887764     4777888888775543

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.92  E-value=5.3e-23  Score=173.90  Aligned_cols=231  Identities=14%  Similarity=0.027  Sum_probs=155.8

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      ..+++++||||+|+||+++++.|+++|++|++++|+......+..++  .....++.++.+|++|.+++.++++      
T Consensus         8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   85 (274)
T PRK07775          8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKI--RADGGEAVAFPLDVTDPDSVKSFVAQAEEAL   85 (274)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCeEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            45679999999999999999999999999999998765444433321  1123467888999999999887775      


Q ss_pred             -cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                       .+|+|||+++.......      ...+.+++|+.++.++++++...   .+..+||++||...+.  ...    .    
T Consensus        86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~--~~~----~----  155 (274)
T PRK07775         86 GEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALR--QRP----H----  155 (274)
T ss_pred             CCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcC--CCC----C----
Confidence             46999999987543211      12266799999999998887532   2456899999975221  111    0    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCC-Ccccc---ccccccC-CCccc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTIS-NPYLK---GAAEMYE-DGVMA  239 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~-~~~~~---~~~~~~~-~~~~~  239 (294)
                             .      ..|+.+|.+.|.+++.++.+.   |++++++|||.+.++..... .....   .....++ .....
T Consensus       156 -------~------~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (274)
T PRK07775        156 -------M------GAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDY  222 (274)
T ss_pred             -------c------chHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhccccccc
Confidence                   0      679999999999999988664   89999999998865531111 10000   0001111 11233


Q ss_pred             cccHHHHHHHHHhhhcCcCCCCeEEee---cccccHHHHHHHH
Q 043792          240 SVDLRFYVDAHICVFEDVSSYGRYLCF---NHVINCNEDAMKL  279 (294)
Q Consensus       240 ~v~v~D~a~~i~~~~~~~~~~~~~~~~---~~~~s~~~~~~~~  279 (294)
                      +++++|+|++++.++..+..+..|++.   ..++...+-.+.+
T Consensus       223 ~~~~~dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (274)
T PRK07775        223 FLRASDLARAITFVAETPRGAHVVNMEVQPEAPLRAPADRQKL  265 (274)
T ss_pred             ccCHHHHHHHHHHHhcCCCCCCeeEEeeccCCCCCCcchhhhh
Confidence            899999999999999875433335432   2334444444433

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.92  E-value=1.3e-23  Score=198.28  Aligned_cols=220  Identities=10%  Similarity=0.095  Sum_probs=153.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCCE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCSG  101 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~  101 (294)
                      .+.||||||||+||||++|++.|.++|++|...                          .+|++|.+.+...+.  ++|+
T Consensus       378 ~~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~--------------------------~~~l~d~~~v~~~i~~~~pd~  431 (668)
T PLN02260        378 KPSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG--------------------------KGRLEDRSSLLADIRNVKPTH  431 (668)
T ss_pred             CCCceEEEECCCchHHHHHHHHHHhCCCeEEee--------------------------ccccccHHHHHHHHHhhCCCE
Confidence            356799999999999999999999999887321                          125677777777776  6899


Q ss_pred             EEecCCCCCCC-----CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhh
Q 043792          102 LFYSFEPPSDH-----STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNL  176 (294)
Q Consensus       102 Vih~a~~~~~~-----~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~  176 (294)
                      |||||+.....     ..++...+++|+.++.+++++|++. +++ +|++||.+++.|+.........+++|+++..+..
T Consensus       432 Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~-g~~-~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~  509 (668)
T PLN02260        432 VFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN-GLL-MMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTG  509 (668)
T ss_pred             EEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc-CCe-EEEEcccceecCCcccccccCCCCCcCCCCCCCC
Confidence            99999875421     2244588999999999999999999 885 6777876544443211000023678876543321


Q ss_pred             hhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCC-Cc---ccccccc-ccCCCccccccHHHHHHHHH
Q 043792          177 CKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTIS-NP---YLKGAAE-MYEDGVMASVDLRFYVDAHI  251 (294)
Q Consensus       177 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~-~~---~~~~~~~-~~~~~~~~~v~v~D~a~~i~  251 (294)
                           +.||.+|.++|++++.+.     ++.++|+.++||...... +.   +++.... ..+.   ...+++|++.+++
T Consensus       510 -----~~Yg~sK~~~E~~~~~~~-----~~~~~r~~~~~~~~~~~~~nfv~~~~~~~~~~~vp~---~~~~~~~~~~~~~  576 (668)
T PLN02260        510 -----SFYSKTKAMVEELLREYD-----NVCTLRVRMPISSDLSNPRNFITKISRYNKVVNIPN---SMTVLDELLPISI  576 (668)
T ss_pred             -----ChhhHHHHHHHHHHHhhh-----hheEEEEEEecccCCCCccHHHHHHhccceeeccCC---CceehhhHHHHHH
Confidence                 789999999999998863     356778887886542211 11   2222221 1221   2677889999988


Q ss_pred             hhhcCcCCCCeEEeec-ccccHHHHHHHHHHHhCC
Q 043792          252 CVFEDVSSYGRYLCFN-HVINCNEDAMKLARMLLP  285 (294)
Q Consensus       252 ~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~  285 (294)
                      .+++. ..+|.|++++ +.+|+.|+++.+++.+++
T Consensus       577 ~l~~~-~~~giyni~~~~~~s~~e~a~~i~~~~~~  610 (668)
T PLN02260        577 EMAKR-NLRGIWNFTNPGVVSHNEILEMYKDYIDP  610 (668)
T ss_pred             HHHHh-CCCceEEecCCCcCcHHHHHHHHHHhcCC
Confidence            88864 3357787765 569999999999998753

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.2e-22  Score=170.07  Aligned_cols=210  Identities=14%  Similarity=0.004  Sum_probs=148.2

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++++++||||+|+||+++++.|+++|++|++++|+.+..+.+.+++  .....++.++.+|++|.+++.++++     
T Consensus         3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l--~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   80 (275)
T PRK05876          3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHL--RAEGFDVHGVMCDVRHREEVTHLADEAFRL   80 (275)
T ss_pred             CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999876555544432  1223467889999999998887775     


Q ss_pred             --cCCEEEecCCCCCCCCc---c---hhhhHhHhhHHHHHHHHHHHh----cCCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHST---Y---DELTAEVETMAAHNVLEACAQ----TNTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~~---~---~~~~~~~n~~~~~~ll~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                        ++|+|||+|+.......   .   .+..+++|+.++.++++++..    .+..+++|++||..++......       
T Consensus        81 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~-------  153 (275)
T PRK05876         81 LGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGL-------  153 (275)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCC-------
Confidence              36999999986432211   1   136789999999999998753    2124689999997643211111       


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCcccc---cc--c-cccCC-
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLK---GA--A-EMYED-  235 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~---~~--~-~~~~~-  235 (294)
                                      ..|+.+|.+.+.+.+.++.+   .|+++++++|+.+.++..........   +.  . ...+. 
T Consensus       154 ----------------~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (275)
T PRK05876        154 ----------------GAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPL  217 (275)
T ss_pred             ----------------chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccc
Confidence                            67999999877666666654   48999999999998775321110100   00  0 11111 


Q ss_pred             -CccccccHHHHHHHHHhhhcCc
Q 043792          236 -GVMASVDLRFYVDAHICVFEDV  257 (294)
Q Consensus       236 -~~~~~v~v~D~a~~i~~~~~~~  257 (294)
                       ....+++++|+|++++.++.++
T Consensus       218 ~~~~~~~~~~dva~~~~~ai~~~  240 (275)
T PRK05876        218 PLQDDNLGVDDIAQLTADAILAN  240 (275)
T ss_pred             cccccCCCHHHHHHHHHHHHHcC
Confidence             1223899999999999999754

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.91  E-value=1.3e-22  Score=168.64  Aligned_cols=217  Identities=17%  Similarity=0.062  Sum_probs=154.2

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc-----
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG-----   98 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-----   98 (294)
                      +++++|+||||+|+||+++++.|+++|++|++++|++.+.+.+...  ......++.++.+|+.|++++.+++++     
T Consensus         3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (246)
T PRK05653          3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAE--LRAAGGEARVLVFDVSDEAAVRALIEAAVEAF   80 (246)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHH--HHhcCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            3457999999999999999999999999999999988765554442  122345688999999999988777753     


Q ss_pred             --CCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           99 --CSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        99 --~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                        +|+|||+++.......      .....++.|+.+..++++++.    +. +.++||++||.... ++...    .   
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~ii~~ss~~~~-~~~~~----~---  151 (246)
T PRK05653         81 GALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKA-RYGRIVNISSVSGV-TGNPG----Q---  151 (246)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEECcHHhc-cCCCC----C---
Confidence              5999999886543211      113678899999999998875    34 66899999997532 22111    1   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-cccccccccCCCcccccc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YLKGAAEMYEDGVMASVD  242 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~v~  242 (294)
                                     ..|+.+|.+.+.+++.++++   .+++++++||+.++++....... ..+......  ....+++
T Consensus       152 ---------------~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  214 (246)
T PRK05653        152 ---------------TNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEVKAEILKEI--PLGRLGQ  214 (246)
T ss_pred             ---------------cHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHHHHHHHhcC--CCCCCcC
Confidence                           67999999999999888765   47999999999999887421110 011110111  1133788


Q ss_pred             HHHHHHHHHhhhcCcC--CCCe-EEeecc
Q 043792          243 LRFYVDAHICVFEDVS--SYGR-YLCFNH  268 (294)
Q Consensus       243 v~D~a~~i~~~~~~~~--~~~~-~~~~~~  268 (294)
                      ++|+++++..++....  .+++ |.+.++
T Consensus       215 ~~dva~~~~~~~~~~~~~~~g~~~~~~gg  243 (246)
T PRK05653        215 PEEVANAVAFLASDAASYITGQVIPVNGG  243 (246)
T ss_pred             HHHHHHHHHHHcCchhcCccCCEEEeCCC
Confidence            9999999999986532  2455 445443

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2e-22  Score=168.56  Aligned_cols=216  Identities=17%  Similarity=0.063  Sum_probs=149.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEE-ecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAA-LHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      .++++|+||||+|+||++++++|+++|++|.++ .|+.++.+.+...  ....+.++.++.+|++|.+++.++++     
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~--~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~   81 (254)
T PRK12746          4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIRE--IESNGGKAFLIEADLNSIDGVKKLVEQLKNE   81 (254)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH--HHhcCCcEEEEEcCcCCHHHHHHHHHHHHHH
Confidence            456899999999999999999999999999875 5655443333321  11223468899999999998877765     


Q ss_pred             --------cCCEEEecCCCCCCCCc---ch---hhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCC
Q 043792           98 --------GCSGLFYSFEPPSDHST---YD---ELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPT  162 (294)
Q Consensus        98 --------~~d~Vih~a~~~~~~~~---~~---~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~  162 (294)
                              ++|+|||+++.......   ..   +..+++|+.++.++++++.+. ...+++|++||..++. +...    
T Consensus        82 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~-~~~~----  156 (254)
T PRK12746         82 LQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRL-GFTG----  156 (254)
T ss_pred             hccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcC-CCCC----
Confidence                    47999999987543221   11   367789999999999998764 2335899999975321 1111    


Q ss_pred             CCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCcccccc-c-ccc--CC
Q 043792          163 SHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGA-A-EMY--ED  235 (294)
Q Consensus       163 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~-~-~~~--~~  235 (294)
                      .                  ..|+.+|.+.+.+.+.++.+   .++++++++||.++++....   ...+. . ...  ..
T Consensus       157 ~------------------~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~---~~~~~~~~~~~~~~~  215 (254)
T PRK12746        157 S------------------IAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAK---LLDDPEIRNFATNSS  215 (254)
T ss_pred             C------------------cchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhh---hccChhHHHHHHhcC
Confidence            1                  67999999999998888765   47999999999998875321   11100 0 000  01


Q ss_pred             CccccccHHHHHHHHHhhhcCcCC--CCe-EEeec
Q 043792          236 GVMASVDLRFYVDAHICVFEDVSS--YGR-YLCFN  267 (294)
Q Consensus       236 ~~~~~v~v~D~a~~i~~~~~~~~~--~~~-~~~~~  267 (294)
                      ....+++++|+|+++..++..+..  .|. |.+.+
T Consensus       216 ~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~  250 (254)
T PRK12746        216 VFGRIGQVEDIADAVAFLASSDSRWVTGQIIDVSG  250 (254)
T ss_pred             CcCCCCCHHHHHHHHHHHcCcccCCcCCCEEEeCC
Confidence            112378999999999988875432  343 55544

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=1.4e-22  Score=169.10  Aligned_cols=216  Identities=14%  Similarity=0.026  Sum_probs=152.0

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++||||||+|+||+++++.|+++|++|++++|+.++.+.+...+  .. ..++.++.+|+.|++++..+++      
T Consensus         3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (251)
T PRK07231          3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEI--LA-GGRAIAVAADVSDEADVEAAVAAALERF   79 (251)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--hc-CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            34689999999999999999999999999999999987665554421  11 3458899999999999987775      


Q ss_pred             -cCCEEEecCCCCCCCC-------cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS-------TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~-------~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                       .+|+|||+++......       ...+..+++|+.++.++++.+...   .+.++||++||..++. +...    .   
T Consensus        80 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-~~~~----~---  151 (251)
T PRK07231         80 GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLR-PRPG----L---  151 (251)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcC-CCCC----c---
Confidence             4699999998643221       112377899999988887776542   2568999999975322 1111    1   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCcc-ccccc-cc-cCCCcccc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPY-LKGAA-EM-YEDGVMAS  240 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~-~~~~~-~~-~~~~~~~~  240 (294)
                                     ..|+.+|...+.+++.++.+.   ++++++++||.+.++........ ..... .. .......+
T Consensus       152 ---------------~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (251)
T PRK07231        152 ---------------GWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRL  216 (251)
T ss_pred             ---------------hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCC
Confidence                           679999999999998887653   79999999999976652211000 00000 01 11112238


Q ss_pred             ccHHHHHHHHHhhhcCcC--CCCeEEe
Q 043792          241 VDLRFYVDAHICVFEDVS--SYGRYLC  265 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~~--~~~~~~~  265 (294)
                      ++++|+|++++.++....  ..|+++.
T Consensus       217 ~~~~dva~~~~~l~~~~~~~~~g~~~~  243 (251)
T PRK07231        217 GTPEDIANAALFLASDEASWITGVTLV  243 (251)
T ss_pred             cCHHHHHHHHHHHhCccccCCCCCeEE
Confidence            899999999999996543  2456543

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1e-22  Score=171.26  Aligned_cols=218  Identities=16%  Similarity=0.061  Sum_probs=151.4

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++++||||||+|+||++++++|+++|++|++++|+.+..+.+.+.   .. ..++.++.+|++|++++.++++     
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~---~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAAR---LP-GAKVTATVADVADPAQVERVFDTAVER   83 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---Hh-cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999987655554441   11 1157889999999998877764     


Q ss_pred             --cCCEEEecCCCCCCCC-------cchhhhHhHhhHHHHHHHHHHHhc---CCC-cEEEEecCcceeeeCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS-------TYDELTAEVETMAAHNVLEACAQT---NTV-DKVVFTSSLTAVVWNNHRDNPTSH  164 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~-------~~~~~~~~~n~~~~~~ll~~~~~~---~~~-~~~v~~Ss~~~~~~~~~~~~~~~~  164 (294)
                        ++|+|||+++......       ......++.|+.++.++++++...   .+. ++|+++||.++ ..+...    . 
T Consensus        84 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~-~~~~~~----~-  157 (264)
T PRK12829         84 FGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAG-RLGYPG----R-  157 (264)
T ss_pred             hCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEeccccc-ccCCCC----C-
Confidence              5799999998752211       112378899999999998887432   244 57888887642 112111    1 


Q ss_pred             CCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc-cc--cccc------c-
Q 043792          165 DFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP-YL--KGAA------E-  231 (294)
Q Consensus       165 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~-~~--~~~~------~-  231 (294)
                                       ..|+.+|.+.|.+++.++.+.   +++++++|||.++|+....... ..  .+..      . 
T Consensus       158 -----------------~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (264)
T PRK12829        158 -----------------TPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEY  220 (264)
T ss_pred             -----------------chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHH
Confidence                             569999999999999887653   8999999999999987321110 00  0000      0 


Q ss_pred             ccCCCccccccHHHHHHHHHhhhcCc--CCCCe-EEeec
Q 043792          232 MYEDGVMASVDLRFYVDAHICVFEDV--SSYGR-YLCFN  267 (294)
Q Consensus       232 ~~~~~~~~~v~v~D~a~~i~~~~~~~--~~~~~-~~~~~  267 (294)
                      ........+++++|+|+++..++...  ...|+ |.+.+
T Consensus       221 ~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~  259 (264)
T PRK12829        221 LEKISLGRMVEPEDIAATALFLASPAARYITGQAISVDG  259 (264)
T ss_pred             HhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEEeCC
Confidence            00011223899999999998888643  23455 44444

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.91  E-value=1.4e-22  Score=169.61  Aligned_cols=217  Identities=15%  Similarity=0.041  Sum_probs=153.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      ..+++||||||+|+||++++++|+++|++|++++|+.++.+.+.+.+  ...+.++.++.+|++|.+++.++++      
T Consensus         8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (255)
T PRK07523          8 LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESL--KGQGLSAHALAFDVTDHDAVRAAIDAFEAEI   85 (255)
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH--HhcCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            45789999999999999999999999999999999876555444422  1223458889999999998888875      


Q ss_pred             -cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                       .+|+|||+++.......      ..++.+++|+.++.++++++.+.   .+.+++|++||........ .    .    
T Consensus        86 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~-~----~----  156 (255)
T PRK07523         86 GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARP-G----I----  156 (255)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCC-C----C----
Confidence             37999999987543211      11377889999999999988754   2457899999974211110 0    1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccc-ccc--CCCccccc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAA-EMY--EDGVMASV  241 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~-~~~--~~~~~~~v  241 (294)
                                    ..|+.+|.+.+.+.+.++.+   +|++++++||+.+.++.......  .... ...  ......|.
T Consensus       157 --------------~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~--~~~~~~~~~~~~~~~~~~  220 (255)
T PRK07523        157 --------------APYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVA--DPEFSAWLEKRTPAGRWG  220 (255)
T ss_pred             --------------ccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhcc--CHHHHHHHHhcCCCCCCc
Confidence                          67999999999999988864   58999999999998886321100  0000 000  01112278


Q ss_pred             cHHHHHHHHHhhhcCcC--CCCe-EEeec
Q 043792          242 DLRFYVDAHICVFEDVS--SYGR-YLCFN  267 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~~--~~~~-~~~~~  267 (294)
                      .++|+|++++.++..+.  ..|+ +++.+
T Consensus       221 ~~~dva~~~~~l~~~~~~~~~G~~i~~~g  249 (255)
T PRK07523        221 KVEELVGACVFLASDASSFVNGHVLYVDG  249 (255)
T ss_pred             CHHHHHHHHHHHcCchhcCccCcEEEECC
Confidence            89999999999987533  2455 44443

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=2.7e-22  Score=167.89  Aligned_cols=217  Identities=14%  Similarity=0.038  Sum_probs=149.4

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC-hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK-LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------   97 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------   97 (294)
                      +++|+||||+|+||+++++.|+++|++|++++|+... .....+.  ......++.++.+|+++++++.++++       
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQE--LRALGVEVIFFPADVADLSAHEAMLDAAQAAWG   79 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHH--HHhcCCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            4789999999999999999999999999999986432 2222221  11223478899999999988877664       


Q ss_pred             cCCEEEecCCCCCCC--------CcchhhhHhHhhHHHHHHHHHHHhc----CC-----CcEEEEecCcceeeeCCCCCC
Q 043792           98 GCSGLFYSFEPPSDH--------STYDELTAEVETMAAHNVLEACAQT----NT-----VDKVVFTSSLTAVVWNNHRDN  160 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~--------~~~~~~~~~~n~~~~~~ll~~~~~~----~~-----~~~~v~~Ss~~~~~~~~~~~~  160 (294)
                      .+|+||||++.....        ....+..+++|+.++.++++++.+.    .+     .++||++||..+.. +...  
T Consensus        80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-~~~~--  156 (256)
T PRK12745         80 RIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIM-VSPN--  156 (256)
T ss_pred             CCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhcc-CCCC--
Confidence            579999999864321        1122377999999999998887543    11     56799999976322 2111  


Q ss_pred             CCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCCCc
Q 043792          161 PTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGV  237 (294)
Q Consensus       161 ~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~  237 (294)
                        .                  +.|+.+|.+.+.+++.++.+   ++++++++|||.+.++....................
T Consensus       157 --~------------------~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~  216 (256)
T PRK12745        157 --R------------------GEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDALIAKGLVPM  216 (256)
T ss_pred             --C------------------cccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhHHhhhhhcCCCc
Confidence              1                  67999999999999998865   589999999999988753211100000000000011


Q ss_pred             cccccHHHHHHHHHhhhcCcC--CCCe-EEeec
Q 043792          238 MASVDLRFYVDAHICVFEDVS--SYGR-YLCFN  267 (294)
Q Consensus       238 ~~~v~v~D~a~~i~~~~~~~~--~~~~-~~~~~  267 (294)
                      ..|.+++|+++++..++....  ..|. |.+.+
T Consensus       217 ~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~g  249 (256)
T PRK12745        217 PRWGEPEDVARAVAALASGDLPYSTGQAIHVDG  249 (256)
T ss_pred             CCCcCHHHHHHHHHHHhCCcccccCCCEEEECC
Confidence            227799999999998886432  2454 45544

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.91  E-value=3.5e-22  Score=165.38  Aligned_cols=208  Identities=15%  Similarity=0.034  Sum_probs=150.4

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++||||||+|+||+++++.|+++|++|++++|++.+......++    ....++++.+|+.|.+++.++++      
T Consensus         5 ~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (239)
T PRK12828          5 LQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGV----PADALRIGGIDLVDPQAARRAVDEVNRQF   80 (239)
T ss_pred             CCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHH----hhcCceEEEeecCCHHHHHHHHHHHHHHh
Confidence            45689999999999999999999999999999999876544333311    11357788899999998887775      


Q ss_pred             -cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                       ++|+|||+++......      ....+.++.|+.++.++++++.+.   .+.+++|++||.+++......         
T Consensus        81 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~---------  151 (239)
T PRK12828         81 GRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGM---------  151 (239)
T ss_pred             CCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCc---------
Confidence             4799999988643211      111266889999999998887532   267899999998632211111         


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHH
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLR  244 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~  244 (294)
                                    ..|+.+|.+.+.+++.++.+   .+++++++|||.++++.....         ........|++++
T Consensus       152 --------------~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~---------~~~~~~~~~~~~~  208 (239)
T PRK12828        152 --------------GAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRAD---------MPDADFSRWVTPE  208 (239)
T ss_pred             --------------chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhc---------CCchhhhcCCCHH
Confidence                          67999999999988877654   489999999999998752110         0111112289999


Q ss_pred             HHHHHHHhhhcCcC--CCCeE-Eeec
Q 043792          245 FYVDAHICVFEDVS--SYGRY-LCFN  267 (294)
Q Consensus       245 D~a~~i~~~~~~~~--~~~~~-~~~~  267 (294)
                      |+|++++.++.+..  ..|++ .+.+
T Consensus       209 dva~~~~~~l~~~~~~~~g~~~~~~g  234 (239)
T PRK12828        209 QIAAVIAFLLSDEAQAITGASIPVDG  234 (239)
T ss_pred             HHHHHHHHHhCcccccccceEEEecC
Confidence            99999999997643  34654 4444

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.91  E-value=2.7e-22  Score=163.98  Aligned_cols=206  Identities=16%  Similarity=0.114  Sum_probs=157.5

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++++++|||||+.||..+++.|+++|++|+.+.|+.++...+..++.. ..+-.++++.+|+++++++..+.+     
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~-~~~v~v~vi~~DLs~~~~~~~l~~~l~~~   81 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELED-KTGVEVEVIPADLSDPEALERLEDELKER   81 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHH-hhCceEEEEECcCCChhHHHHHHHHHHhc
Confidence            44678999999999999999999999999999999999998888776422 224567899999999988877664     


Q ss_pred             --cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                        .+|++|||||......      ....+++++|+.+...|..+....   .+-.++|+++|.+++.+.+..        
T Consensus        82 ~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~--------  153 (265)
T COG0300          82 GGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYM--------  153 (265)
T ss_pred             CCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcch--------
Confidence              4899999998755431      222399999999988887776543   255799999998765544333        


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccH
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDL  243 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v  243 (294)
                                     +.|++||...-.+.+.+..+   .|+.++++.||.+.......     ++...-.......++..
T Consensus       154 ---------------avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~-----~~~~~~~~~~~~~~~~~  213 (265)
T COG0300         154 ---------------AVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDA-----KGSDVYLLSPGELVLSP  213 (265)
T ss_pred             ---------------HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccc-----cccccccccchhhccCH
Confidence                           78999999998888887766   47999999999996555210     11111111123348999


Q ss_pred             HHHHHHHHhhhcCc
Q 043792          244 RFYVDAHICVFEDV  257 (294)
Q Consensus       244 ~D~a~~i~~~~~~~  257 (294)
                      +|+|+..+.++.+.
T Consensus       214 ~~va~~~~~~l~~~  227 (265)
T COG0300         214 EDVAEAALKALEKG  227 (265)
T ss_pred             HHHHHHHHHHHhcC
Confidence            99999999999864

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.7e-22  Score=168.02  Aligned_cols=214  Identities=21%  Similarity=0.132  Sum_probs=152.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc---cCC
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK---GCS  100 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---~~d  100 (294)
                      .++++++||||+|+||+++++.|+++|++|++++|+.++.+.+.+.       .+..++.+|+++.+.+.++++   .+|
T Consensus         7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~-------~~~~~~~~D~~~~~~v~~~~~~~~~~d   79 (245)
T PRK07060          7 FSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGE-------TGCEPLRLDVGDDAAIRAALAAAGAFD   79 (245)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------hCCeEEEecCCCHHHHHHHHHHhCCCC
Confidence            4568999999999999999999999999999999987655544431       146788999999988888876   479


Q ss_pred             EEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---CC-CcEEEEecCcceeeeCCCCCCCCCCCCCCCC
Q 043792          101 GLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---NT-VDKVVFTSSLTAVVWNNHRDNPTSHDFDERN  170 (294)
Q Consensus       101 ~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~  170 (294)
                      +|||+++......      ...++.+.+|+.++.++++++.+.   .+ .++||++||.+++. +...    .       
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-~~~~----~-------  147 (245)
T PRK07060         80 GLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALV-GLPD----H-------  147 (245)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcC-CCCC----C-------
Confidence            9999998754321      112366789999999999988654   12 36899999975322 2111    1       


Q ss_pred             CCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCcccccccccc-CCCccccccHHHH
Q 043792          171 WSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMY-EDGVMASVDLRFY  246 (294)
Q Consensus       171 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~-~~~~~~~v~v~D~  246 (294)
                                 ..|+.+|.+.+.+++.++.+   .+++++++||+.++++.......-........ ......|++++|+
T Consensus       148 -----------~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  216 (245)
T PRK07060        148 -----------LAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDV  216 (245)
T ss_pred             -----------cHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHH
Confidence                       67999999999999998865   37999999999999886321100000000111 1122238999999


Q ss_pred             HHHHHhhhcCcC--CCCeEEeec
Q 043792          247 VDAHICVFEDVS--SYGRYLCFN  267 (294)
Q Consensus       247 a~~i~~~~~~~~--~~~~~~~~~  267 (294)
                      |++++.++..+.  ..|+++..+
T Consensus       217 a~~~~~l~~~~~~~~~G~~~~~~  239 (245)
T PRK07060        217 AAPILFLLSDAASMVSGVSLPVD  239 (245)
T ss_pred             HHHHHHHcCcccCCccCcEEeEC
Confidence            999999997543  346654433

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.91  E-value=3.6e-22  Score=166.74  Aligned_cols=214  Identities=16%  Similarity=0.031  Sum_probs=152.4

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++|+||||+|+||++++++|+++|++|+++.|+.+.......++.   ...++.++.+|++|++++.++++      
T Consensus         3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   79 (252)
T PRK06138          3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA---AGGRAFARQGDVGSAEAVEALVDFVAARW   79 (252)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh---cCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            346899999999999999999999999999999998765554444221   23468899999999998887765      


Q ss_pred             -cCCEEEecCCCCCCCC---cc---hhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS---TY---DELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~---~~---~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                       ++|+|||+++......   ..   .+..+++|+.++.++.+++.    +. +.++||++||.++. ++...    .   
T Consensus        80 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~~sS~~~~-~~~~~----~---  150 (252)
T PRK06138         80 GRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQ-GGGSIVNTASQLAL-AGGRG----R---  150 (252)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-CCeEEEEECChhhc-cCCCC----c---
Confidence             5799999998654221   11   12668899999877776653    44 66799999997532 22211    1   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc-cccccc--ccc-CCCcc-
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP-YLKGAA--EMY-EDGVM-  238 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~-~~~~~~--~~~-~~~~~-  238 (294)
                                     ..|+.+|.+.+.+++.++.+.   +++++++|||.++++....... ......  ... ..... 
T Consensus       151 ---------------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (252)
T PRK06138        151 ---------------AAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMN  215 (252)
T ss_pred             ---------------cHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCC
Confidence                           679999999999999988765   8999999999998886321100 000000  001 01112 


Q ss_pred             ccccHHHHHHHHHhhhcCcCC--CCeEE
Q 043792          239 ASVDLRFYVDAHICVFEDVSS--YGRYL  264 (294)
Q Consensus       239 ~~v~v~D~a~~i~~~~~~~~~--~~~~~  264 (294)
                      .|++++|+|++++.++..+..  .|.++
T Consensus       216 ~~~~~~d~a~~~~~l~~~~~~~~~g~~~  243 (252)
T PRK06138        216 RFGTAEEVAQAALFLASDESSFATGTTL  243 (252)
T ss_pred             CCcCHHHHHHHHHHHcCchhcCccCCEE
Confidence            288999999999999877543  35543

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.91  E-value=2.1e-22  Score=167.99  Aligned_cols=216  Identities=17%  Similarity=0.129  Sum_probs=149.7

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEE-ecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAA-LHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------   97 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------   97 (294)
                      +++|+||||+|+||+++++.|+++|++|+++ .|+..+.+.+.++  ....+.++.++.+|++|++++..+++       
T Consensus         4 ~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          4 GKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEE--IEALGRKALAVKANVGDVEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH--HHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5799999999999999999999999998774 6665444443332  22234568899999999998888776       


Q ss_pred             cCCEEEecCCCCCCCCc---ch---hhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           98 GCSGLFYSFEPPSDHST---YD---ELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~~---~~---~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                      .+|+|||+++.......   ..   ...+++|+.++.++++++.+.   .+.++||++||..+.......          
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~----------  151 (250)
T PRK08063         82 RLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENY----------  151 (250)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCc----------
Confidence            47999999986432211   11   256889999999999888754   255799999997532211111          


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc---cccccccccCCCcccccc
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP---YLKGAAEMYEDGVMASVD  242 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~---~~~~~~~~~~~~~~~~v~  242 (294)
                                   ..|+.+|.+.+.+++.++.+   .++++++++|+.+..+.......   +.......  .....+++
T Consensus       152 -------------~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~  216 (250)
T PRK08063        152 -------------TTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAK--TPAGRMVE  216 (250)
T ss_pred             -------------cHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcC--CCCCCCcC
Confidence                         67999999999999988765   48999999999997665211100   00000000  01122799


Q ss_pred             HHHHHHHHHhhhcCcC--CCCe-EEeecc
Q 043792          243 LRFYVDAHICVFEDVS--SYGR-YLCFNH  268 (294)
Q Consensus       243 v~D~a~~i~~~~~~~~--~~~~-~~~~~~  268 (294)
                      ++|+|++++.++..+.  ..|+ +++.++
T Consensus       217 ~~dva~~~~~~~~~~~~~~~g~~~~~~gg  245 (250)
T PRK08063        217 PEDVANAVLFLCSPEADMIRGQTIIVDGG  245 (250)
T ss_pred             HHHHHHHHHHHcCchhcCccCCEEEECCC
Confidence            9999999999987543  2455 444443

>PRK09186 flagellin modification protein A; Provisional

Probab=99.91  E-value=1.7e-22  Score=169.09  Aligned_cols=225  Identities=19%  Similarity=0.120  Sum_probs=150.5

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc------
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG------   98 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~------   98 (294)
                      ++|+|+||||+|+||+++++.|+++|++|++++|+.++.+.+...+........+.++.+|++|++++.+++++      
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   82 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG   82 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999999998776655544321111233567789999999998888763      


Q ss_pred             -CCEEEecCCCCCCC-------C--cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           99 -CSGLFYSFEPPSDH-------S--TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        99 -~d~Vih~a~~~~~~-------~--~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                       +|+|||||+.....       .  ......+++|+.++..+++++.+.   .+.++||++||..+.. +...      .
T Consensus        83 ~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-~~~~------~  155 (256)
T PRK09186         83 KIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVV-APKF------E  155 (256)
T ss_pred             CccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhc-cccc------h
Confidence             79999999753211       1  112367788988877766655432   2567999999975322 1111      1


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCCCcccccc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVD  242 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~  242 (294)
                      ..+..+....      ..|+.+|.+.+.+.+.++.+   .++++++++||.++++.   ...+.+......  ....+++
T Consensus       156 ~~~~~~~~~~------~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~---~~~~~~~~~~~~--~~~~~~~  224 (256)
T PRK09186        156 IYEGTSMTSP------VEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQ---PEAFLNAYKKCC--NGKGMLD  224 (256)
T ss_pred             hccccccCCc------chhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCC---CHHHHHHHHhcC--CccCCCC
Confidence            1122211111      46999999999999887765   47999999999987654   111111100111  1123889


Q ss_pred             HHHHHHHHHhhhcCcC--CCCeEEeec
Q 043792          243 LRFYVDAHICVFEDVS--SYGRYLCFN  267 (294)
Q Consensus       243 v~D~a~~i~~~~~~~~--~~~~~~~~~  267 (294)
                      ++|+|++++.++.+..  .+|+++..+
T Consensus       225 ~~dva~~~~~l~~~~~~~~~g~~~~~~  251 (256)
T PRK09186        225 PDDICGTLVFLLSDQSKYITGQNIIVD  251 (256)
T ss_pred             HHHhhhhHhheeccccccccCceEEec
Confidence            9999999999997543  246654433

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=3.2e-22  Score=165.81  Aligned_cols=201  Identities=14%  Similarity=0.038  Sum_probs=148.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      ..+++|+||||+|+||++++++|+++|++|++++|+..+.+.+.+++  .....++.++.+|+++++++.++++      
T Consensus         5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (239)
T PRK07666          5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEV--EAYGVKVVIATADVSDYEEVTAAIEQLKNEL   82 (239)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HHhCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            44678999999999999999999999999999999876655544432  1223468899999999999888775      


Q ss_pred             -cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                       ++|+|||+++......      ...+..+++|+.++.++++++...   .+.+++|++||..+.. +...    .    
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~-~~~~----~----  153 (239)
T PRK07666         83 GSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQK-GAAV----T----  153 (239)
T ss_pred             CCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhcc-CCCC----C----
Confidence             6899999998754321      111367899999999998887642   2567899999976322 2111    1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHH
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLR  244 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~  244 (294)
                                    ..|+.+|.+.+.+++.++.+   .+++++++|||.+.++...... ...+       ....++..+
T Consensus       154 --------------~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~-~~~~-------~~~~~~~~~  211 (239)
T PRK07666        154 --------------SAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLG-LTDG-------NPDKVMQPE  211 (239)
T ss_pred             --------------cchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcc-cccc-------CCCCCCCHH
Confidence                          57999999999998887754   4899999999999876521110 0011       112368899


Q ss_pred             HHHHHHHhhhcCc
Q 043792          245 FYVDAHICVFEDV  257 (294)
Q Consensus       245 D~a~~i~~~~~~~  257 (294)
                      |+|++++.++..+
T Consensus       212 ~~a~~~~~~l~~~  224 (239)
T PRK07666        212 DLAEFIVAQLKLN  224 (239)
T ss_pred             HHHHHHHHHHhCC
Confidence            9999999999765

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2e-22  Score=168.07  Aligned_cols=214  Identities=17%  Similarity=0.076  Sum_probs=152.1

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++|+||||+|+||+++++.|+++|++|++++|+.+..+.+.+++  .....++.++.+|++|.+++.++++      
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (250)
T PRK07774          4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQI--VADGGTAIAVQVDVSDPDSAKAMADATVSAF   81 (250)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            45689999999999999999999999999999999865554444421  1223467788999999988877665      


Q ss_pred             -cCCEEEecCCCCCCC---------CcchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDH---------STYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSH  164 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~---------~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~  164 (294)
                       .+|+|||+++.....         ....++.+++|+.++.++++++.+.   .+.++||++||..++.  . .      
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--~-~------  152 (250)
T PRK07774         82 GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL--Y-S------  152 (250)
T ss_pred             CCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC--C-c------
Confidence             479999999864311         1112367889999999999988754   2456999999975321  0 1      


Q ss_pred             CCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccc--cccC-CCcc
Q 043792          165 DFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAA--EMYE-DGVM  238 (294)
Q Consensus       165 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~--~~~~-~~~~  238 (294)
                                       +.|+.+|.+.+.+++.++.+.   ++++++++||.+..+.......   ...  .... ....
T Consensus       153 -----------------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~---~~~~~~~~~~~~~~  212 (250)
T PRK07774        153 -----------------NFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTP---KEFVADMVKGIPLS  212 (250)
T ss_pred             -----------------cccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCC---HHHHHHHHhcCCCC
Confidence                             579999999999999988764   7999999999987766321110   000  0000 0111


Q ss_pred             ccccHHHHHHHHHhhhcCcC--CCCe-EEeecc
Q 043792          239 ASVDLRFYVDAHICVFEDVS--SYGR-YLCFNH  268 (294)
Q Consensus       239 ~~v~v~D~a~~i~~~~~~~~--~~~~-~~~~~~  268 (294)
                      .+.+++|+|++++.++....  ..|+ |++.++
T Consensus       213 ~~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~g  245 (250)
T PRK07774        213 RMGTPEDLVGMCLFLLSDEASWITGQIFNVDGG  245 (250)
T ss_pred             CCcCHHHHHHHHHHHhChhhhCcCCCEEEECCC
Confidence            26789999999999887642  2455 555443

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.90  E-value=3.1e-22  Score=167.66  Aligned_cols=218  Identities=13%  Similarity=0.046  Sum_probs=154.9

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++++|+||||+|+||+++++.|+++|++|++++|+.+..+.+.+.+     ..++.++.+|++|.+++.++++     
T Consensus         3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (257)
T PRK07067          3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-----GPAAIAVSLDVTRQDSIDRIVAAAVER   77 (257)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            345689999999999999999999999999999999876655554421     2358889999999998887775     


Q ss_pred             --cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---C-CCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---N-TVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~-~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                        .+|++||+++......      ...+..+++|+.++.++++++...   . .-.++|++||... .++...    .  
T Consensus        78 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~-~~~~~~----~--  150 (257)
T PRK07067         78 FGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAG-RRGEAL----V--  150 (257)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHh-CCCCCC----C--
Confidence              4799999988643221      112377999999999999998653   1 1248999999642 222111    1  


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccc-------cccc-cccC
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYL-------KGAA-EMYE  234 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~-------~~~~-~~~~  234 (294)
                                      ..|+.+|.+.+.+.+.++.+   +++++++++||.++++.........       .+.. ..+.
T Consensus       151 ----------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (257)
T PRK07067        151 ----------------SHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVG  214 (257)
T ss_pred             ----------------chhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHh
Confidence                            67999999999999988764   5899999999999987532111000       0010 1111


Q ss_pred             C--CccccccHHHHHHHHHhhhcCcC--CCCe-EEeecc
Q 043792          235 D--GVMASVDLRFYVDAHICVFEDVS--SYGR-YLCFNH  268 (294)
Q Consensus       235 ~--~~~~~v~v~D~a~~i~~~~~~~~--~~~~-~~~~~~  268 (294)
                      .  ....+.+++|+|++++.++....  ..|+ +++.++
T Consensus       215 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg  253 (257)
T PRK07067        215 EAVPLGRMGVPDDLTGMALFLASADADYIVAQTYNVDGG  253 (257)
T ss_pred             hcCCCCCccCHHHHHHHHHHHhCcccccccCcEEeecCC
Confidence            1  12238999999999999987543  2444 555544

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.90  E-value=4.6e-22  Score=166.67  Aligned_cols=225  Identities=18%  Similarity=0.093  Sum_probs=160.7

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------c
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------G   98 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~   98 (294)
                      +++++||||+|+||+++++.|+++|++|++++|+..+.+.+...+    ...++.++.+|+.|.+++..++.       +
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADAL----GDARFVPVACDLTDAASLAAALANAAAERGP   77 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----cCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999999876655554421    23468899999999998887775       3


Q ss_pred             CCEEEecCCCCCCCCc---ch---hhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCCCC
Q 043792           99 CSGLFYSFEPPSDHST---YD---ELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDER  169 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~~---~~---~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~  169 (294)
                      +|+|||+++.......   ..   ...+.+|+.++.++++++...   .+.+++|++||.....  ...    .      
T Consensus        78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~----~------  145 (257)
T PRK07074         78 VDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMA--ALG----H------  145 (257)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcC--CCC----C------
Confidence            7999999986432211   11   255779999999998887432   2557899999964211  001    1      


Q ss_pred             CCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCcccccccccc-----CCCccccc
Q 043792          170 NWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAAEMY-----EDGVMASV  241 (294)
Q Consensus       170 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~-----~~~~~~~v  241 (294)
                                  ..|+.+|.+.+.+++.++.+.   +++++++||+.++++......   ...+...     ......|+
T Consensus       146 ------------~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~  210 (257)
T PRK07074        146 ------------PAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARV---AANPQVFEELKKWYPLQDFA  210 (257)
T ss_pred             ------------cccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhccc---ccChHHHHHHHhcCCCCCCC
Confidence                        469999999999999988664   799999999999887632111   1011110     11223499


Q ss_pred             cHHHHHHHHHhhhcCc--CCCCeE-Eeec-ccccHHHHHHHHHH
Q 043792          242 DLRFYVDAHICVFEDV--SSYGRY-LCFN-HVINCNEDAMKLAR  281 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~--~~~~~~-~~~~-~~~s~~~~~~~~~~  281 (294)
                      +++|++++++.++...  ...|++ .+.+ ......|+++.+.+
T Consensus       211 ~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~  254 (257)
T PRK07074        211 TPDDVANAVLFLASPAARAITGVCLPVDGGLTAGNREMARTLTL  254 (257)
T ss_pred             CHHHHHHHHHHHcCchhcCcCCcEEEeCCCcCcCChhhhhhhcc
Confidence            9999999999999643  334664 3443 44668888877643

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.90  E-value=3.1e-22  Score=166.66  Aligned_cols=219  Identities=12%  Similarity=0.016  Sum_probs=151.6

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecC-CCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc----
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHN-HGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG----   98 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~----   98 (294)
                      .++++++||||+|+||++++++|+++|++|+++.++ ++..+.+.++  ......++.++.+|++|++++.+++++    
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNE--LGKEGHDVYAVQADVSKVEDANRLVEEAVNH   81 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHH--HHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            456899999999999999999999999999876553 3333333332  222234688999999999998888764    


Q ss_pred             ---CCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           99 ---CSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        99 ---~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                         +|+|||+++......      ...+..+++|+.++.++++++...   .+.+++|++||..+.. +...    .   
T Consensus        82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-~~~~----~---  153 (247)
T PRK12935         82 FGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQA-GGFG----Q---  153 (247)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcC-CCCC----C---
Confidence               799999998754322      122377899999999999988743   1346899999975322 1111    1   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccccccCCCccccccH
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDL  243 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v  243 (294)
                                     ..|+.+|.+.+.+++.++.+.   ++++++++||.+.++............ .........+.++
T Consensus       154 ---------------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~  217 (247)
T PRK12935        154 ---------------TNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEEVRQK-IVAKIPKKRFGQA  217 (247)
T ss_pred             ---------------cchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHHHHHH-HHHhCCCCCCcCH
Confidence                           679999999999988887664   899999999999765421111000000 0001112238999


Q ss_pred             HHHHHHHHhhhcCcC-CCCe-EEeecc
Q 043792          244 RFYVDAHICVFEDVS-SYGR-YLCFNH  268 (294)
Q Consensus       244 ~D~a~~i~~~~~~~~-~~~~-~~~~~~  268 (294)
                      +|++++++.+++... ..|. |++.++
T Consensus       218 edva~~~~~~~~~~~~~~g~~~~i~~g  244 (247)
T PRK12935        218 DEIAKGVVYLCRDGAYITGQQLNINGG  244 (247)
T ss_pred             HHHHHHHHHHcCcccCccCCEEEeCCC
Confidence            999999999986542 3444 666554

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.90  E-value=4.2e-22  Score=166.30  Aligned_cols=221  Identities=14%  Similarity=-0.018  Sum_probs=151.0

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC-hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK-LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      ...+++||||||+|+||++++++|+++|++|++..|+... .......  ......++.++.+|+++++++..+++    
T Consensus         3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (252)
T PRK06077          3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKM--VKENGGEGIGVLADVSTREGCETLAKATID   80 (252)
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHH--HHHcCCeeEEEEeccCCHHHHHHHHHHHHH
Confidence            3456899999999999999999999999999887764322 2221111  11223356788999999988877665    


Q ss_pred             ---cCCEEEecCCCCCCCC----cch--hhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHS----TYD--ELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~----~~~--~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                         ++|+|||++|......    ..+  +..+++|+.++.++++++.+. ...++||++||..++.....     .    
T Consensus        81 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----~----  151 (252)
T PRK06077         81 RYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAYG-----L----  151 (252)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCCC-----c----
Confidence               5799999998633221    111  367899999999999988755 22358999999753211111     1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc--CCeEEEEecCceeCCCCCCCCccccccc-cccC--CCcccccc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR--GISMVSINGGLVMGPDVTISNPYLKGAA-EMYE--DGVMASVD  242 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ilrp~~i~G~~~~~~~~~~~~~~-~~~~--~~~~~~v~  242 (294)
                                    +.|+.+|.+.+.+++.++.+.  ++.+.+++||.+.++............. ....  .....+++
T Consensus       152 --------------~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (252)
T PRK06077        152 --------------SIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILD  217 (252)
T ss_pred             --------------hHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCC
Confidence                          679999999999999988775  6899999999998775321111111000 0000  11123899


Q ss_pred             HHHHHHHHHhhhcCcCCCCe-EEeecc
Q 043792          243 LRFYVDAHICVFEDVSSYGR-YLCFNH  268 (294)
Q Consensus       243 v~D~a~~i~~~~~~~~~~~~-~~~~~~  268 (294)
                      ++|+|++++.++......|+ |++.++
T Consensus       218 ~~dva~~~~~~~~~~~~~g~~~~i~~g  244 (252)
T PRK06077        218 PEEVAEFVAAILKIESITGQVFVLDSG  244 (252)
T ss_pred             HHHHHHHHHHHhCccccCCCeEEecCC
Confidence            99999999999976655554 666554

>PLN02253 xanthoxin dehydrogenase

Probab=99.90  E-value=4.1e-22  Score=169.06  Aligned_cols=219  Identities=12%  Similarity=0.004  Sum_probs=152.7

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++++++||||+|+||++++++|+++|++|++++|+.+..+.+.+++   ....++.++.+|++|.+++.++++     
T Consensus        15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   91 (280)
T PLN02253         15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSL---GGEPNVCFFHCDVTVEDDVSRAVDFTVDK   91 (280)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---cCCCceEEEEeecCCHHHHHHHHHHHHHH
Confidence            345689999999999999999999999999999998765554444421   223468899999999999888776     


Q ss_pred             --cCCEEEecCCCCCCCC--------cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS--------TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSH  164 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~--------~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~  164 (294)
                        ++|+|||||+......        ...+..+++|+.++.++++++.+.   .+..++|++||..+..+....      
T Consensus        92 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~------  165 (280)
T PLN02253         92 FGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGP------  165 (280)
T ss_pred             hCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCC------
Confidence              5899999998643211        112378999999999999887643   133589999987643222111      


Q ss_pred             CCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCC--Ccc-cccc----ccccC
Q 043792          165 DFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTIS--NPY-LKGA----AEMYE  234 (294)
Q Consensus       165 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~--~~~-~~~~----~~~~~  234 (294)
                                       ..|+.+|.+.|.+.+.++.+.   ++++.+++||.+.++.....  ... ....    .....
T Consensus       166 -----------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  228 (280)
T PLN02253        166 -----------------HAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAG  228 (280)
T ss_pred             -----------------cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhh
Confidence                             579999999999999988764   79999999999987642110  000 0000    00001


Q ss_pred             C-C--ccccccHHHHHHHHHhhhcCcC--CCCe-EEeec
Q 043792          235 D-G--VMASVDLRFYVDAHICVFEDVS--SYGR-YLCFN  267 (294)
Q Consensus       235 ~-~--~~~~v~v~D~a~~i~~~~~~~~--~~~~-~~~~~  267 (294)
                      . .  ....++++|+|++++.++....  ..|+ +.+.+
T Consensus       229 ~~~~l~~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdg  267 (280)
T PLN02253        229 KNANLKGVELTVDDVANAVLFLASDEARYISGLNLMIDG  267 (280)
T ss_pred             cCCCCcCCCCCHHHHHHHHHhhcCcccccccCcEEEECC
Confidence            0 0  0125789999999999986532  2455 44444

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.90  E-value=4.2e-22  Score=166.14  Aligned_cols=213  Identities=15%  Similarity=0.014  Sum_probs=150.8

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------   97 (294)
                      ++++||||||+|+||++++++|+++|++|++++|+.+....+...+  .....++.++.+|+.|.+++.++++       
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   79 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADI--RAKGGNAQAFACDITDRDSVDTAVAAAEQALG   79 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHH--HhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999999876655554422  1223468899999999998887765       


Q ss_pred             cCCEEEecCCCCCCCCc---c---hhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 GCSGLFYSFEPPSDHST---Y---DELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~~---~---~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                      ++|+|||+++.......   .   .+..+++|+.++.++++++.    +. +.+++|++||.+++. +...    .    
T Consensus        80 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~iss~~~~~-~~~~----~----  149 (250)
T TIGR03206        80 PVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVER-GAGRIVNIASDAARV-GSSG----E----  149 (250)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEECchhhcc-CCCC----C----
Confidence            47999999986432111   1   12678999999999888775    34 567999999986422 2111    1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCcc-ccccc---cccCC-Cccc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPY-LKGAA---EMYED-GVMA  239 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~-~~~~~---~~~~~-~~~~  239 (294)
                                    ..|+.+|.+.+.+.+.++.+.   +++++++||+.++++........ .....   ..... ....
T Consensus       150 --------------~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (250)
T TIGR03206       150 --------------AVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGR  215 (250)
T ss_pred             --------------chHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccC
Confidence                          679999999999999888764   89999999999988852211000 00000   00011 1112


Q ss_pred             cccHHHHHHHHHhhhcCcC--CCCeE
Q 043792          240 SVDLRFYVDAHICVFEDVS--SYGRY  263 (294)
Q Consensus       240 ~v~v~D~a~~i~~~~~~~~--~~~~~  263 (294)
                      +...+|+|+++..++..+.  ..|+.
T Consensus       216 ~~~~~dva~~~~~l~~~~~~~~~g~~  241 (250)
T TIGR03206       216 LGQPDDLPGAILFFSSDDASFITGQV  241 (250)
T ss_pred             CcCHHHHHHHHHHHcCcccCCCcCcE
Confidence            6778999999999886543  24554

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK05717 oxidoreductase; Validated

Probab=99.90  E-value=3.9e-22  Score=166.90  Aligned_cols=205  Identities=12%  Similarity=0.035  Sum_probs=147.0

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      +.++++|+||||+|+||+++++.|+++|++|++++|+..+...+.++     ...++.++.+|+++.+++.++++     
T Consensus         7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (255)
T PRK05717          7 GHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKA-----LGENAWFIAMDVADEAQVAAGVAEVLGQ   81 (255)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHH-----cCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999998876554444331     12467899999999988766553     


Q ss_pred             --cCCEEEecCCCCCCCC------c--chhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS------T--YDELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~------~--~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                        .+|+|||||+......      .  ..+..+++|+.++.++++++.+.  ....++|++||..+.. +...    .  
T Consensus        82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~-~~~~----~--  154 (255)
T PRK05717         82 FGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQ-SEPD----T--  154 (255)
T ss_pred             hCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcC-CCCC----C--
Confidence              3799999998754211      1  11378999999999999998642  1235899999975322 2111    1  


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc--CCeEEEEecCceeCCCCCCCCc--cccccccccCCCccccc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR--GISMVSINGGLVMGPDVTISNP--YLKGAAEMYEDGVMASV  241 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ilrp~~i~G~~~~~~~~--~~~~~~~~~~~~~~~~v  241 (294)
                                      +.|+.+|.+.+.+++.++.+.  ++++++++||.+.++.......  +........+  ...+.
T Consensus       155 ----------------~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~--~~~~~  216 (255)
T PRK05717        155 ----------------EAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRAEPLSEADHAQHP--AGRVG  216 (255)
T ss_pred             ----------------cchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccchHHHHHHhhcCC--CCCCc
Confidence                            679999999999999998875  4899999999998875221100  0000000011  12277


Q ss_pred             cHHHHHHHHHhhhcCc
Q 043792          242 DLRFYVDAHICVFEDV  257 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~  257 (294)
                      +++|+|.++..++...
T Consensus       217 ~~~~va~~~~~l~~~~  232 (255)
T PRK05717        217 TVEDVAAMVAWLLSRQ  232 (255)
T ss_pred             CHHHHHHHHHHHcCch
Confidence            8999999999888643

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.90  E-value=5.5e-22  Score=166.47  Aligned_cols=215  Identities=14%  Similarity=0.032  Sum_probs=146.0

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++++||||+|+||+++++.|+++|++|++++|+.. ...+..+  +.....++.++.+|++|.+++.++++      
T Consensus         6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK12823          6 FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAE--LRAAGGEALALTADLETYAGAQAAMAAAVEAF   82 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHH--HHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            45689999999999999999999999999999998753 2223221  22223467889999999988777665      


Q ss_pred             -cCCEEEecCCCCCCC-------CcchhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDH-------STYDELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~-------~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                       ++|++||||+.....       ....+..+++|+.++..+++++.    +. +.+++|++||..+  ++...       
T Consensus        83 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~--~~~~~-------  152 (260)
T PRK12823         83 GRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQ-GGGAIVNVSSIAT--RGINR-------  152 (260)
T ss_pred             CCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCeEEEEcCccc--cCCCC-------
Confidence             479999999753211       11113667899988876666554    34 5578999999752  22111       


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCcc---ccccc--------c
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPY---LKGAA--------E  231 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~---~~~~~--------~  231 (294)
                                      .+|+.+|.+.+.+.+.++.+.   ++++++++||.++++........   .....        .
T Consensus       153 ----------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (260)
T PRK12823        153 ----------------VPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQ  216 (260)
T ss_pred             ----------------CccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHH
Confidence                            579999999999999988765   89999999999999741100000   00000        0


Q ss_pred             ccCC-CccccccHHHHHHHHHhhhcCcC--CCCe-EEeec
Q 043792          232 MYED-GVMASVDLRFYVDAHICVFEDVS--SYGR-YLCFN  267 (294)
Q Consensus       232 ~~~~-~~~~~v~v~D~a~~i~~~~~~~~--~~~~-~~~~~  267 (294)
                      .... ....+.+++|+|++++.++....  ..|+ +.+.+
T Consensus       217 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~g  256 (260)
T PRK12823        217 TLDSSLMKRYGTIDEQVAAILFLASDEASYITGTVLPVGG  256 (260)
T ss_pred             HhccCCcccCCCHHHHHHHHHHHcCcccccccCcEEeecC
Confidence            0011 11126789999999999886542  3454 44544

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3.6e-22  Score=164.10  Aligned_cols=202  Identities=16%  Similarity=0.039  Sum_probs=142.1

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc---cCCEE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK---GCSGL  102 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---~~d~V  102 (294)
                      +|+||||||+|+||+++++.|+++ ++|++++|+.+..+.+.+.      ..++.++.+|++|.+++.++++   ++|+|
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~id~v   75 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAE------LPGATPFPVDLTDPEAIAAAVEQLGRLDVL   75 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHH------hccceEEecCCCCHHHHHHHHHhcCCCCEE
Confidence            579999999999999999999999 9999999986554444331      1357899999999999998887   48999


Q ss_pred             EecCCCCCCCC---cc---hhhhHhHhhHHHHHHHHH----HHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCC
Q 043792          103 FYSFEPPSDHS---TY---DELTAEVETMAAHNVLEA----CAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWS  172 (294)
Q Consensus       103 ih~a~~~~~~~---~~---~~~~~~~n~~~~~~ll~~----~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~  172 (294)
                      ||+++......   .+   ..+.++.|+.+..++.++    +++.  .+++|++||..++......              
T Consensus        76 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~v~~ss~~~~~~~~~~--------------  139 (227)
T PRK08219         76 VHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA--HGHVVFINSGAGLRANPGW--------------  139 (227)
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCeEEEEcchHhcCcCCCC--------------
Confidence            99998754321   11   125688888885555554    4333  3689999997532211111              


Q ss_pred             ChhhhhhccchhHhhHHHHHHHHHHHHHhc-C-CeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHHHHHHH
Q 043792          173 DVNLCKKFKLWHGLSKTLAEKTAWALAMDR-G-ISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAH  250 (294)
Q Consensus       173 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~-~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~i  250 (294)
                               ..|+.+|.+.+.+++.++.+. + +++.+++||.+.++...   .+..+....+  ....|++++|+|+++
T Consensus       140 ---------~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~---~~~~~~~~~~--~~~~~~~~~dva~~~  205 (227)
T PRK08219        140 ---------GSYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQR---GLVAQEGGEY--DPERYLRPETVAKAV  205 (227)
T ss_pred             ---------chHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHhh---hhhhhhcccc--CCCCCCCHHHHHHHH
Confidence                     679999999999888876542 4 89999999987665411   1111111111  112389999999999


Q ss_pred             HhhhcCcCCCCeEE
Q 043792          251 ICVFEDVSSYGRYL  264 (294)
Q Consensus       251 ~~~~~~~~~~~~~~  264 (294)
                      +.+++++..+..+.
T Consensus       206 ~~~l~~~~~~~~~~  219 (227)
T PRK08219        206 RFAVDAPPDAHITE  219 (227)
T ss_pred             HHHHcCCCCCccce
Confidence            99998764333343

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3.5e-22  Score=168.56  Aligned_cols=207  Identities=14%  Similarity=0.034  Sum_probs=148.7

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc-------
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG-------   98 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-------   98 (294)
                      +++|+||||+|+||++++++|+++|++|++++|+++....          ..++.++.+|++|++++.+++++       
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~----------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~   73 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP----------IPGVELLELDVTDDASVQAAVDEVIARAGR   73 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----------cCCCeeEEeecCCHHHHHHHHHHHHHhCCC
Confidence            4789999999999999999999999999999998643211          23688999999999999888764       


Q ss_pred             CCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHH----HhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           99 CSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEAC----AQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                      +|+||||++.......      ..+..+++|+.++.++++++    ++. +.+++|++||..++.....     .     
T Consensus        74 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~-----~-----  142 (270)
T PRK06179         74 IDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQ-GSGRIINISSVLGFLPAPY-----M-----  142 (270)
T ss_pred             CCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEECCccccCCCCC-----c-----
Confidence            6999999987543211      12378999999999998885    344 6789999999753221111     1     


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccc----------cccCC
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAA----------EMYED  235 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~----------~~~~~  235 (294)
                                   ..|+.+|.+.+.+.+.++.+   +|+++++++||.+.++.............          .....
T Consensus       143 -------------~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (270)
T PRK06179        143 -------------ALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAK  209 (270)
T ss_pred             -------------cHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHh
Confidence                         67999999999999887755   58999999999998775322110000000          00001


Q ss_pred             CccccccHHHHHHHHHhhhcCcCCCCeEEee
Q 043792          236 GVMASVDLRFYVDAHICVFEDVSSYGRYLCF  266 (294)
Q Consensus       236 ~~~~~v~v~D~a~~i~~~~~~~~~~~~~~~~  266 (294)
                      ........+|+|+.++.++..+.....|...
T Consensus       210 ~~~~~~~~~~va~~~~~~~~~~~~~~~~~~~  240 (270)
T PRK06179        210 AVKKADAPEVVADTVVKAALGPWPKMRYTAG  240 (270)
T ss_pred             ccccCCCHHHHHHHHHHHHcCCCCCeeEecC
Confidence            1112567899999999999776544446553

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.1e-22  Score=168.80  Aligned_cols=226  Identities=14%  Similarity=0.042  Sum_probs=156.8

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      +.++++||||||+|+||+++++.|+++|++|++++|+++.. .+..+  ......++.++.+|+++.+++.++++     
T Consensus         4 ~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (258)
T PRK08628          4 NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEE--LRALQPRAEFVQVDLTDDAQCRDAVEQTVAK   80 (258)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHH--HHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            34568999999999999999999999999999999987655 33222  22234568899999999998887775     


Q ss_pred             --cCCEEEecCCCCCCCC-----cchhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS-----TYDELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~-----~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                        .+|+|||+++......     ...+..+++|+.++.++.+++.+.  .+.++||++||..+.. +...    .     
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~-~~~~----~-----  150 (258)
T PRK08628         81 FGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALT-GQGG----T-----  150 (258)
T ss_pred             cCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhcc-CCCC----C-----
Confidence              4799999998533211     112377899999999998887542  1346899999976432 2111    1     


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-cccccc---cccCCCc--cc
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YLKGAA---EMYEDGV--MA  239 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~~~~~---~~~~~~~--~~  239 (294)
                                   ..|+.+|.+.+.+++.++.+   .+++++.++||.++++....... ......   .......  ..
T Consensus       151 -------------~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (258)
T PRK08628        151 -------------SGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHR  217 (258)
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCcccc
Confidence                         67999999999999998764   48999999999999885211000 000000   0000111  13


Q ss_pred             cccHHHHHHHHHhhhcCc--CCCCe-EEeecccccHHH
Q 043792          240 SVDLRFYVDAHICVFEDV--SSYGR-YLCFNHVINCNE  274 (294)
Q Consensus       240 ~v~v~D~a~~i~~~~~~~--~~~~~-~~~~~~~~s~~~  274 (294)
                      ++.++|+|++++.++...  ..+|. +.+.++...+++
T Consensus       218 ~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~~~~~  255 (258)
T PRK08628        218 MTTAEEIADTAVFLLSERSSHTTGQWLFVDGGYVHLDR  255 (258)
T ss_pred             CCCHHHHHHHHHHHhChhhccccCceEEecCCcccccc
Confidence            788999999999998654  33455 455554444443

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.90  E-value=1.3e-22  Score=167.52  Aligned_cols=217  Identities=25%  Similarity=0.266  Sum_probs=154.1

Q ss_pred             EEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC--hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEecC
Q 043792           29 VCVMDASGHFASALVRRLLLRGYTVHAALHNHGK--LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSF  106 (294)
Q Consensus        29 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~a  106 (294)
                      |+|+||||.+|+++++.|++.+++|++++|+.++  .+.+..        .+++++.+|+.|.+++.++|+++|+||.+.
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~--------~g~~vv~~d~~~~~~l~~al~g~d~v~~~~   72 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQA--------LGAEVVEADYDDPESLVAALKGVDAVFSVT   72 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHH--------TTTEEEES-TT-HHHHHHHHTTCSEEEEES
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhc--------ccceEeecccCCHHHHHHHHcCCceEEeec
Confidence            7999999999999999999999999999998743  223333        378899999999999999999999999988


Q ss_pred             CCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHh
Q 043792          107 EPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGL  186 (294)
Q Consensus       107 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~  186 (294)
                      +...          ........++++++++. ++++||+ ||.+ ..+            .+.....|.      .....
T Consensus        73 ~~~~----------~~~~~~~~~li~Aa~~a-gVk~~v~-ss~~-~~~------------~~~~~~~p~------~~~~~  121 (233)
T PF05368_consen   73 PPSH----------PSELEQQKNLIDAAKAA-GVKHFVP-SSFG-ADY------------DESSGSEPE------IPHFD  121 (233)
T ss_dssp             SCSC----------CCHHHHHHHHHHHHHHH-T-SEEEE-SEES-SGT------------TTTTTSTTH------HHHHH
T ss_pred             Ccch----------hhhhhhhhhHHHhhhcc-ccceEEE-EEec-ccc------------ccccccccc------chhhh
Confidence            7654          12356678999999999 8999986 4432 111            111111111      33445


Q ss_pred             hHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc---ccccc--ccccCCCc--ccc-ccHHHHHHHHHhhhcCcC
Q 043792          187 SKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP---YLKGA--AEMYEDGV--MAS-VDLRFYVDAHICVFEDVS  258 (294)
Q Consensus       187 sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~---~~~~~--~~~~~~~~--~~~-v~v~D~a~~i~~~~~~~~  258 (294)
                      .|...|+++++    .+++++++||+.++.........   .....  .....++.  ..+ ++.+|++++++.++.++.
T Consensus       122 ~k~~ie~~l~~----~~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~  197 (233)
T PF05368_consen  122 QKAEIEEYLRE----SGIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPE  197 (233)
T ss_dssp             HHHHHHHHHHH----CTSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGG
T ss_pred             hhhhhhhhhhh----ccccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChH
Confidence            77777777765    59999999999887554221111   11111  13334443  345 499999999999998876


Q ss_pred             CC--Ce-EEeecccccHHHHHHHHHHHhCCCCC
Q 043792          259 SY--GR-YLCFNHVINCNEDAMKLARMLLPPSD  288 (294)
Q Consensus       259 ~~--~~-~~~~~~~~s~~~~~~~~~~~~~~~~~  288 (294)
                      ..  ++ +.+.++.+|+.|+++.+.+.+|++.+
T Consensus       198 ~~~~~~~~~~~~~~~t~~eia~~~s~~~G~~v~  230 (233)
T PF05368_consen  198 KHNNGKTIFLAGETLTYNEIAAILSKVLGKKVK  230 (233)
T ss_dssp             GTTEEEEEEEGGGEEEHHHHHHHHHHHHTSEEE
T ss_pred             HhcCCEEEEeCCCCCCHHHHHHHHHHHHCCccE
Confidence            65  34 45667889999999999999998754

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.90  E-value=5.9e-22  Score=164.39  Aligned_cols=204  Identities=13%  Similarity=0.066  Sum_probs=147.7

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..+|++++||||+|+||+.++++|+++|++|++++|++++.+.+.+.+  .....++.++.+|++|++++..+++     
T Consensus         3 ~~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (241)
T PRK07454          3 LNSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAEL--RSTGVKAAAYSIDLSNPEAIAPGIAELLEQ   80 (241)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999876555544422  1223468899999999998877765     


Q ss_pred             --cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                        ++|+|||+++......      ...+..+++|+.++.++++++...   .+.+++|++||..+.  ....    .   
T Consensus        81 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~--~~~~----~---  151 (241)
T PRK07454         81 FGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAAR--NAFP----Q---  151 (241)
T ss_pred             cCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhC--cCCC----C---
Confidence              4799999998644321      112377889999988888776432   255789999997532  1111    0   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccH
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDL  243 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v  243 (294)
                              .      ..|+.+|.+.+.+.+.++.+   .+++++++|||.+-.+...... ..    ....  ...++..
T Consensus       152 --------~------~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~-~~----~~~~--~~~~~~~  210 (241)
T PRK07454        152 --------W------GAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTET-VQ----ADFD--RSAMLSP  210 (241)
T ss_pred             --------c------cHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccccc-cc----cccc--cccCCCH
Confidence                    0      67999999999998887644   4899999999999766521100 00    0111  1236889


Q ss_pred             HHHHHHHHhhhcCcC
Q 043792          244 RFYVDAHICVFEDVS  258 (294)
Q Consensus       244 ~D~a~~i~~~~~~~~  258 (294)
                      +|+|++++.++.++.
T Consensus       211 ~~va~~~~~l~~~~~  225 (241)
T PRK07454        211 EQVAQTILHLAQLPP  225 (241)
T ss_pred             HHHHHHHHHHHcCCc
Confidence            999999999998764

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.90  E-value=6.1e-22  Score=166.49  Aligned_cols=205  Identities=17%  Similarity=0.075  Sum_probs=147.8

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------c
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------G   98 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~   98 (294)
                      +++||||||+|+||+++++.|+++|++|++++|+....+.+.+++  .....++.++.+|+.|.+++..+++       +
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l--~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   78 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQEL--ADHGGEALVVPTDVSDAEACERLIEAAVARFGG   78 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999999999999999999876555444422  2234468899999999998887775       5


Q ss_pred             CCEEEecCCCCCCCCc----c---hhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCCCCCCCCCCC
Q 043792           99 CSGLFYSFEPPSDHST----Y---DELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDER  169 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~~----~---~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~  169 (294)
                      +|+||||++.......    .   ....+++|+.++.++++.+...  .+.+++|++||..++. +...    .      
T Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~-~~~~----~------  147 (263)
T PRK06181         79 IDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLT-GVPT----R------  147 (263)
T ss_pred             CCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccC-CCCC----c------
Confidence            7999999986443211    1   1266899999999999988642  1346899999976332 1111    1      


Q ss_pred             CCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccc-cccCCCccccccHHH
Q 043792          170 NWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAA-EMYEDGVMASVDLRF  245 (294)
Q Consensus       170 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~-~~~~~~~~~~v~v~D  245 (294)
                                  ..|+.+|.+.+.+.+.++.+   .++++++++||.+..+...... -..+.. ...+.....+++++|
T Consensus       148 ------------~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d  214 (263)
T PRK06181        148 ------------SGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRAL-DGDGKPLGKSPMQESKIMSAEE  214 (263)
T ss_pred             ------------cHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhc-cccccccccccccccCCCCHHH
Confidence                        67999999999998887654   4899999999999776522110 001111 111111124899999


Q ss_pred             HHHHHHhhhcC
Q 043792          246 YVDAHICVFED  256 (294)
Q Consensus       246 ~a~~i~~~~~~  256 (294)
                      +|++++.++..
T Consensus       215 va~~i~~~~~~  225 (263)
T PRK06181        215 CAEAILPAIAR  225 (263)
T ss_pred             HHHHHHHHhhC
Confidence            99999999975

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.9e-22  Score=167.87  Aligned_cols=214  Identities=14%  Similarity=0.105  Sum_probs=151.6

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------   97 (294)
                      ++++|+||||+|+||++++++|+++|++|++++|++...+.+..++  .....++.++.+|++|.+++..+++       
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEI--DDLGRRALAVPTDITDEDQCANLVALALERFG   81 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH--HHhCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999999876555554432  1223468899999999998877764       


Q ss_pred             cCCEEEecCCCCCCC-----C--cchhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           98 GCSGLFYSFEPPSDH-----S--TYDELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~-----~--~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                      ++|+|||+++.....     .  ...++.+++|+.++..+++++...  +..++||++||..+.. +...    .     
T Consensus        82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~-~~~~----~-----  151 (258)
T PRK07890         82 RVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRH-SQPK----Y-----  151 (258)
T ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhcc-CCCC----c-----
Confidence            479999999864321     1  112378999999999999998753  1225899999975321 1111    1     


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-cccc--c--cccc----C-C
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YLKG--A--AEMY----E-D  235 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~~~--~--~~~~----~-~  235 (294)
                                   ..|+.+|.+.+.+++.++.+   .+++++++|||.++++....... ..++  .  ....    . .
T Consensus       152 -------------~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (258)
T PRK07890        152 -------------GAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANS  218 (258)
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcC
Confidence                         67999999999999998865   48999999999999986321100 0000  0  0001    0 1


Q ss_pred             CccccccHHHHHHHHHhhhcCc--CCCCeE
Q 043792          236 GVMASVDLRFYVDAHICVFEDV--SSYGRY  263 (294)
Q Consensus       236 ~~~~~v~v~D~a~~i~~~~~~~--~~~~~~  263 (294)
                      ....+.+++|+|++++.++...  ..+|+.
T Consensus       219 ~~~~~~~~~dva~a~~~l~~~~~~~~~G~~  248 (258)
T PRK07890        219 DLKRLPTDDEVASAVLFLASDLARAITGQT  248 (258)
T ss_pred             CccccCCHHHHHHHHHHHcCHhhhCccCcE
Confidence            1122788999999999988742  335554

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.1e-21  Score=163.40  Aligned_cols=204  Identities=17%  Similarity=0.087  Sum_probs=145.9

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC----hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK----LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--   97 (294)
                      .++|+|+||||+|+||+++++.|+++|++|++++|....    .+.+..+  ......++.++.+|+.|.+++.++++  
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   81 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAG--IEAAGGKALGLAFDVRDFAATRAALDAG   81 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHH--HHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            356899999999999999999999999999998764322    2222221  12224568899999999998887764  


Q ss_pred             -----cCCEEEecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHHH-----hcCCCcEEEEecCcceeeeCCCCCCC
Q 043792           98 -----GCSGLFYSFEPPSDHS----T--YDELTAEVETMAAHNVLEACA-----QTNTVDKVVFTSSLTAVVWNNHRDNP  161 (294)
Q Consensus        98 -----~~d~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~~-----~~~~~~~~v~~Ss~~~~~~~~~~~~~  161 (294)
                           ++|+|||+++......    .  .....+++|+.++.++++++.     +. +.+++|++||..++. +...   
T Consensus        82 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~iv~~sS~~~~~-~~~~---  156 (249)
T PRK12827         82 VEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRAR-RGGRIVNIASVAGVR-GNRG---  156 (249)
T ss_pred             HHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-CCeEEEEECCchhcC-CCCC---
Confidence                 4799999998755211    1  123678999999999999987     34 567899999976322 2111   


Q ss_pred             CCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCC-Cc
Q 043792          162 TSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYED-GV  237 (294)
Q Consensus       162 ~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~-~~  237 (294)
                       .                  ..|+.+|.+.+.+++.++.+   .+++++++|||.++++...... ..   ...... ..
T Consensus       157 -~------------------~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~-~~---~~~~~~~~~  213 (249)
T PRK12827        157 -Q------------------VNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAA-PT---EHLLNPVPV  213 (249)
T ss_pred             -C------------------chhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccc-hH---HHHHhhCCC
Confidence             1                  67999999999999888765   3899999999999987632111 00   000001 11


Q ss_pred             cccccHHHHHHHHHhhhcCc
Q 043792          238 MASVDLRFYVDAHICVFEDV  257 (294)
Q Consensus       238 ~~~v~v~D~a~~i~~~~~~~  257 (294)
                      ..+.+++|+|++++.++...
T Consensus       214 ~~~~~~~~va~~~~~l~~~~  233 (249)
T PRK12827        214 QRLGEPDEVAALVAFLVSDA  233 (249)
T ss_pred             cCCcCHHHHHHHHHHHcCcc
Confidence            12568999999999888653

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.90  E-value=5e-22  Score=166.42  Aligned_cols=194  Identities=16%  Similarity=0.112  Sum_probs=143.6

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc-------
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG-------   98 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-------   98 (294)
                      +++|+||||+|+||+++++.|+++|++|++++|+.+..+.+.+++  .. ..++.++.+|++|.+++.++++.       
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~--~~-~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   78 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARL--PK-AARVSVYAADVRDADALAAAAADFIAAHGL   78 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc--cc-CCeeEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999999999999876554444421  11 12688999999999988877653       


Q ss_pred             CCEEEecCCCCCCCC-------cchhhhHhHhhHHHHHHHHH----HHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           99 CSGLFYSFEPPSDHS-------TYDELTAEVETMAAHNVLEA----CAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~-------~~~~~~~~~n~~~~~~ll~~----~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                      +|++||+++......       ...+..+++|+.++.+++++    +++. +.+++|++||..++. +...    .    
T Consensus        79 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~-~~~~iv~isS~~~~~-~~~~----~----  148 (257)
T PRK07024         79 PDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAA-RRGTLVGIASVAGVR-GLPG----A----  148 (257)
T ss_pred             CCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhc-CCCEEEEEechhhcC-CCCC----C----
Confidence            699999998644211       11237899999999998774    4444 557999999976332 2111    1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHH
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLR  244 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~  244 (294)
                                    ..|+.+|.+.+.+.+.++.+   ++++++++|||.+.++......         +..  ..++..+
T Consensus       149 --------------~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~---------~~~--~~~~~~~  203 (257)
T PRK07024        149 --------------GAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHNP---------YPM--PFLMDAD  203 (257)
T ss_pred             --------------cchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcCC---------CCC--CCccCHH
Confidence                          67999999999999888644   5899999999999877521100         000  1146799


Q ss_pred             HHHHHHHhhhcCc
Q 043792          245 FYVDAHICVFEDV  257 (294)
Q Consensus       245 D~a~~i~~~~~~~  257 (294)
                      |+|+.++.++.++
T Consensus       204 ~~a~~~~~~l~~~  216 (257)
T PRK07024        204 RFAARAARAIARG  216 (257)
T ss_pred             HHHHHHHHHHhCC
Confidence            9999999999764

>PRK06128 oxidoreductase; Provisional

Probab=99.90  E-value=1.7e-21  Score=166.84  Aligned_cols=219  Identities=12%  Similarity=-0.004  Sum_probs=151.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC--hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK--LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      .++|+||||||+|+||+++++.|+++|++|++..++.+.  .+.+...  ......++.++.+|++|.+++.++++    
T Consensus        53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  130 (300)
T PRK06128         53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQL--IQAEGRKAVALPGDLKDEAFCRQLVERAVK  130 (300)
T ss_pred             cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHH--HHHcCCeEEEEecCCCCHHHHHHHHHHHHH
Confidence            446899999999999999999999999999887765432  2223221  11223467889999999988877764    


Q ss_pred             ---cCCEEEecCCCCCCCC-------cchhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHS-------TYDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~-------~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                         ++|+|||||+......       ...+..+++|+.++.++++++.+. ..-.++|++||..++......        
T Consensus       131 ~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--------  202 (300)
T PRK06128        131 ELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPTL--------  202 (300)
T ss_pred             HhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCCc--------
Confidence               5799999998643211       112388999999999999998764 122589999998632211111        


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCC--Cccccc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYED--GVMASV  241 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~--~~~~~v  241 (294)
                                     ..|+.+|.+.+.+++.++.+   .|+++++++||.+.++...... ........+..  ....+.
T Consensus       203 ---------------~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~-~~~~~~~~~~~~~p~~r~~  266 (300)
T PRK06128        203 ---------------LDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGG-QPPEKIPDFGSETPMKRPG  266 (300)
T ss_pred             ---------------hhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCC-CCHHHHHHHhcCCCCCCCc
Confidence                           56999999999999998876   4899999999999988632111 00000011111  111277


Q ss_pred             cHHHHHHHHHhhhcCcC--CCCe-EEeecc
Q 043792          242 DLRFYVDAHICVFEDVS--SYGR-YLCFNH  268 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~~--~~~~-~~~~~~  268 (294)
                      +.+|+|.+++.++....  ..|+ +.+.++
T Consensus       267 ~p~dva~~~~~l~s~~~~~~~G~~~~v~gg  296 (300)
T PRK06128        267 QPVEMAPLYVLLASQESSYVTGEVFGVTGG  296 (300)
T ss_pred             CHHHHHHHHHHHhCccccCccCcEEeeCCC
Confidence            89999999999886543  2455 445443

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.90  E-value=9.5e-22  Score=164.86  Aligned_cols=217  Identities=15%  Similarity=0.055  Sum_probs=149.4

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC-CChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNH-GKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      +.++|++|||||+|+||+++++.|+++|++|+++.++. +..+.+..+  ......++.++.+|++|.+++.++++    
T Consensus         6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   83 (258)
T PRK09134          6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAE--IRALGRRAVALQADLADEAEVRALVARASA   83 (258)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH--HHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            34568999999999999999999999999999887653 333333332  11224468899999999998887765    


Q ss_pred             ---cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                         .+|+|||||+......      ...+..+++|+.++.++++++...   ..-+++|+++|...+.+....       
T Consensus        84 ~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~-------  156 (258)
T PRK09134         84 ALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDF-------  156 (258)
T ss_pred             HcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCc-------
Confidence               3799999998643321      112378999999999999987754   133578888775321110000       


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc--CCeEEEEecCceeCCCCCCCCccccccccccCCCccccccH
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR--GISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDL  243 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v  243 (294)
                                      ..|+.+|.+.+.+.+.++.+.  ++++++++||.++.........+ .........+  ...++
T Consensus       157 ----------------~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~~~~~-~~~~~~~~~~--~~~~~  217 (258)
T PRK09134        157 ----------------LSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQSPEDF-ARQHAATPLG--RGSTP  217 (258)
T ss_pred             ----------------hHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccChHHH-HHHHhcCCCC--CCcCH
Confidence                            579999999999999988764  48999999999875431111101 1000111111  25789


Q ss_pred             HHHHHHHHhhhcCcCCCCe-EEeec
Q 043792          244 RFYVDAHICVFEDVSSYGR-YLCFN  267 (294)
Q Consensus       244 ~D~a~~i~~~~~~~~~~~~-~~~~~  267 (294)
                      +|+|++++.+++.+..+|+ +.+.+
T Consensus       218 ~d~a~~~~~~~~~~~~~g~~~~i~g  242 (258)
T PRK09134        218 EEIAAAVRYLLDAPSVTGQMIAVDG  242 (258)
T ss_pred             HHHHHHHHHHhcCCCcCCCEEEECC
Confidence            9999999999987766676 44444

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.90  E-value=5.5e-22  Score=166.35  Aligned_cols=220  Identities=16%  Similarity=0.121  Sum_probs=151.3

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------c
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------G   98 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~   98 (294)
                      +++||||||+|+||+++++.|+++|++|++++|+....+.+...++......++.++.+|++|.+++.++++       .
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999999876555544422111112368899999999988877664       4


Q ss_pred             CCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---CC-CcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           99 CSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---NT-VDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                      +|+|||+++......      ...+..+++|+.++.++++++.+.   .+ -.++|++||..+. ++...    .     
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~-~~~~~----~-----  151 (259)
T PRK12384         82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGK-VGSKH----N-----  151 (259)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccc-cCCCC----C-----
Confidence            699999998654321      112377899999998888877543   24 3589999996522 22111    1     


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCC-c-cc--cc----cc-cccCC-
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISN-P-YL--KG----AA-EMYED-  235 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~-~-~~--~~----~~-~~~~~-  235 (294)
                                   ..|+.+|.+.+.+++.++.+   +|+++.++|||.++++...... . ..  .+    .. ..+.+ 
T Consensus       152 -------------~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (259)
T PRK12384        152 -------------SGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDK  218 (259)
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHh
Confidence                         67999999999998888754   6899999999998876532110 0 00  00    00 11111 


Q ss_pred             -CccccccHHHHHHHHHhhhcCcC--CCCe-EEeecc
Q 043792          236 -GVMASVDLRFYVDAHICVFEDVS--SYGR-YLCFNH  268 (294)
Q Consensus       236 -~~~~~v~v~D~a~~i~~~~~~~~--~~~~-~~~~~~  268 (294)
                       ....+++++|++++++.++....  ..|+ |++.++
T Consensus       219 ~~~~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g  255 (259)
T PRK12384        219 VPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGG  255 (259)
T ss_pred             CcccCCCCHHHHHHHHHHHcCcccccccCceEEEcCC
Confidence             12238999999999998876542  2454 666554

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.90  E-value=7e-22  Score=164.77  Aligned_cols=215  Identities=19%  Similarity=0.110  Sum_probs=152.9

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ...+++|+||||+|+||+++++.|+++|++|++++|++++...+.+.+  .....++.++.+|++|.+++.++++     
T Consensus         4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (250)
T PRK12939          4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAAL--EAAGGRAHAIAADLADPASVQRFFDAAAAA   81 (250)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH--HhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            445789999999999999999999999999999998876555444422  2223468999999999998887774     


Q ss_pred             --cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                        ++|+|||+++.......      ..+..++.|+.++.++++++.+.   .+..+||++||..... +...    .   
T Consensus        82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-~~~~----~---  153 (250)
T PRK12939         82 LGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALW-GAPK----L---  153 (250)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhcc-CCCC----c---
Confidence              57999999987543211      11266889999999999887643   1345999999975321 1111    1   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccc-ccc--CCCcccc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAA-EMY--EDGVMAS  240 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~-~~~--~~~~~~~  240 (294)
                                     ..|+.+|.+.+.+++.++.+   .++++++++||.+..+......   .+.. ..+  ......+
T Consensus       154 ---------------~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~  215 (250)
T PRK12939        154 ---------------GAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVP---ADERHAYYLKGRALERL  215 (250)
T ss_pred             ---------------chHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccC---ChHHHHHHHhcCCCCCC
Confidence                           56999999999999988765   4799999999998766532111   1010 001  1122238


Q ss_pred             ccHHHHHHHHHhhhcCcC--CCCeEEe
Q 043792          241 VDLRFYVDAHICVFEDVS--SYGRYLC  265 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~~--~~~~~~~  265 (294)
                      ++++|+|++++.++....  ..|+++.
T Consensus       216 ~~~~dva~~~~~l~~~~~~~~~G~~i~  242 (250)
T PRK12939        216 QVPDDVAGAVLFLLSDAARFVTGQLLP  242 (250)
T ss_pred             CCHHHHHHHHHHHhCccccCccCcEEE
Confidence            999999999999997542  3555543

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1e-21  Score=166.32  Aligned_cols=209  Identities=16%  Similarity=0.124  Sum_probs=146.0

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------   97 (294)
                      ++++|+||||+|+||+++++.|+++|++|++++|+++..+.+..        .++.++.+|++|.+++.++++       
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~--------~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   74 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA--------EGLEAFQLDYAEPESIAALVAQVLELSG   74 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--------CCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999999999999999999998766554443        267889999999988877664       


Q ss_pred             -cCCEEEecCCCCCCCCc------chhhhHhHhhHH----HHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHST------YDELTAEVETMA----AHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~----~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                       .+|+|||||+.......      ..+..+++|+.+    +.++++.+++. +.+++|++||..+.......        
T Consensus        75 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~-~~g~iv~isS~~~~~~~~~~--------  145 (277)
T PRK05993         75 GRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ-GQGRIVQCSSILGLVPMKYR--------  145 (277)
T ss_pred             CCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc-CCCEEEEECChhhcCCCCcc--------
Confidence             46999999886443211      113678999999    45556666666 66899999997532211101        


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccc----ccc----cc--
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKG----AAE----MY--  233 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~----~~~----~~--  233 (294)
                                     ..|+.+|.+.+.+.+.++.+   +|+++++++||.+-.+...........    ...    .+  
T Consensus       146 ---------------~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (277)
T PRK05993        146 ---------------GAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQ  210 (277)
T ss_pred             ---------------chHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHH
Confidence                           67999999999999887644   589999999999976642111000000    000    00  


Q ss_pred             --------CCCccccccHHHHHHHHHhhhcCcCCCCeEEe
Q 043792          234 --------EDGVMASVDLRFYVDAHICVFEDVSSYGRYLC  265 (294)
Q Consensus       234 --------~~~~~~~v~v~D~a~~i~~~~~~~~~~~~~~~  265 (294)
                              .......+..+++|+.++.++.++.....|++
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~va~~i~~a~~~~~~~~~~~~  250 (277)
T PRK05993        211 QMARLEGGGSKSRFKLGPEAVYAVLLHALTAPRPRPHYRV  250 (277)
T ss_pred             HHHHHHhhhhccccCCCHHHHHHHHHHHHcCCCCCCeeee
Confidence                    00111146889999999999987654334544

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.89  E-value=1.2e-21  Score=163.25  Aligned_cols=199  Identities=17%  Similarity=0.147  Sum_probs=144.1

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------cC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------GC   99 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~   99 (294)
                      |+|+||||+|+||+++++.|+++|++|++++|++++.+.+...     ...++.++.+|++|.+++.++++       ++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   75 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDE-----LGDNLYIAQLDVRNRAAIEEMLASLPAEWRNI   75 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-----hccceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            6899999999999999999999999999999987665554441     12368899999999988877764       58


Q ss_pred             CEEEecCCCCCCC-------CcchhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792          100 SGLFYSFEPPSDH-------STYDELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus       100 d~Vih~a~~~~~~-------~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                      |+|||+++.....       ....++++++|+.++.++++++.    +. +.+++|++||.++.. +...    .     
T Consensus        76 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~-~~~~----~-----  144 (248)
T PRK10538         76 DVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER-NHGHIINIGSTAGSW-PYAG----G-----  144 (248)
T ss_pred             CEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEECCcccCC-CCCC----C-----
Confidence            9999999863211       11123788999999777766654    34 667999999975221 1111    1     


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccc----cccCCCccccc
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAA----EMYEDGVMASV  241 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~----~~~~~~~~~~v  241 (294)
                                   ..|+.+|.+.+.+.+.++.+.   ++++.+++||.+.|+.....  ...+..    ..+.  ...++
T Consensus       145 -------------~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~--~~~~~~~~~~~~~~--~~~~~  207 (248)
T PRK10538        145 -------------NVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNV--RFKGDDGKAEKTYQ--NTVAL  207 (248)
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchh--hccCcHHHHHhhcc--ccCCC
Confidence                         679999999999999887664   79999999999986652211  011111    1111  11367


Q ss_pred             cHHHHHHHHHhhhcCcC
Q 043792          242 DLRFYVDAHICVFEDVS  258 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~~  258 (294)
                      ..+|+|++++.++..+.
T Consensus       208 ~~~dvA~~~~~l~~~~~  224 (248)
T PRK10538        208 TPEDVSEAVWWVATLPA  224 (248)
T ss_pred             CHHHHHHHHHHHhcCCC
Confidence            89999999999987553

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.6e-21  Score=161.80  Aligned_cols=216  Identities=14%  Similarity=0.029  Sum_probs=149.9

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++++++||||+|+||.++++.|+++|++|++++|++++.+.+.+++  .....++.++.+|+++++++.++++     
T Consensus         3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (254)
T PRK07478          3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEI--RAEGGEAVALAGDVRDEAYAKALVALAVER   80 (254)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            345689999999999999999999999999999999877666555432  1223468889999999988877765     


Q ss_pred             --cCCEEEecCCCCCCCC-----c--chhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS-----T--YDELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPTSH  164 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~-----~--~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  164 (294)
                        .+|++||+|+......     .  ..+..+++|+.++..+.+++.    +. +.+++|++||..+...+...    . 
T Consensus        81 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~-~~~~iv~~sS~~~~~~~~~~----~-  154 (254)
T PRK07478         81 FGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLAR-GGGSLIFTSTFVGHTAGFPG----M-  154 (254)
T ss_pred             cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEechHhhccCCCC----c-
Confidence              5799999998643211     1  123779999988887766544    34 55789999997532211111    1 


Q ss_pred             CCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccccccCC--Cccc
Q 043792          165 DFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAAEMYED--GVMA  239 (294)
Q Consensus       165 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~--~~~~  239 (294)
                                       ..|+.+|.+.+.+.+.++.+.   ++++++++||.+-.+........ .........  ....
T Consensus       155 -----------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~  216 (254)
T PRK07478        155 -----------------AAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDT-PEALAFVAGLHALKR  216 (254)
T ss_pred             -----------------chhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCC-HHHHHHHHhcCCCCC
Confidence                             679999999999999988764   69999999999976632111000 000000000  1112


Q ss_pred             cccHHHHHHHHHhhhcCcC--CCCeEE
Q 043792          240 SVDLRFYVDAHICVFEDVS--SYGRYL  264 (294)
Q Consensus       240 ~v~v~D~a~~i~~~~~~~~--~~~~~~  264 (294)
                      +..++|+|+++++++....  .+|+.+
T Consensus       217 ~~~~~~va~~~~~l~s~~~~~~~G~~~  243 (254)
T PRK07478        217 MAQPEEIAQAALFLASDAASFVTGTAL  243 (254)
T ss_pred             CcCHHHHHHHHHHHcCchhcCCCCCeE
Confidence            6789999999999886542  245533

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.89  E-value=1.6e-21  Score=162.42  Aligned_cols=214  Identities=12%  Similarity=0.000  Sum_probs=151.3

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++|+||||+|+||++++++|+++|++|++++|+..  +.+.+.  ......++.++.+|+++.+++.++++      
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (248)
T TIGR01832         3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQ--VEALGRRFLSLTADLSDIEAIKALVDSAVEEF   78 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHH--HHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999998642  222221  11223468899999999998876664      


Q ss_pred             -cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc---CC-CcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT---NT-VDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~---~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                       ++|++||+++.......      ..++.+++|+.++.++++++.+.   ++ .+++|++||..++......        
T Consensus        79 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~--------  150 (248)
T TIGR01832        79 GHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRV--------  150 (248)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCC--------
Confidence             47999999987543211      12377899999999999987643   13 4689999997533211111        


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccc---ccc-CCCccc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAA---EMY-EDGVMA  239 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~---~~~-~~~~~~  239 (294)
                                     ..|+.+|.+.+.+.+.++.+.   ++++++++||.+..+....   +.....   ... ......
T Consensus       151 ---------------~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~---~~~~~~~~~~~~~~~~~~~  212 (248)
T TIGR01832       151 ---------------PSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQA---LRADEDRNAAILERIPAGR  212 (248)
T ss_pred             ---------------chhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhc---cccChHHHHHHHhcCCCCC
Confidence                           569999999999999998874   8999999999998775221   111000   000 011123


Q ss_pred             cccHHHHHHHHHhhhcCcC--CCCeEEeec
Q 043792          240 SVDLRFYVDAHICVFEDVS--SYGRYLCFN  267 (294)
Q Consensus       240 ~v~v~D~a~~i~~~~~~~~--~~~~~~~~~  267 (294)
                      |+.++|+|++++.++....  ..|+++..+
T Consensus       213 ~~~~~dva~~~~~l~s~~~~~~~G~~i~~d  242 (248)
T TIGR01832       213 WGTPDDIGGPAVFLASSASDYVNGYTLAVD  242 (248)
T ss_pred             CcCHHHHHHHHHHHcCccccCcCCcEEEeC
Confidence            8999999999999997533  346665443

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.1e-21  Score=161.84  Aligned_cols=206  Identities=15%  Similarity=0.065  Sum_probs=144.6

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++|+||||+|+||++++++|+++|++|++++|+.+....+.++     ...++.++.+|++|.+++..+++      
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (249)
T PRK06500          4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAE-----LGESALVIRADAGDVAAQKALAQALAEAF   78 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHH-----hCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            4568999999999999999999999999999999876544433331     13467889999999887765543      


Q ss_pred             -cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDER  169 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~  169 (294)
                       ++|+|||+++......      ...+..+++|+.++.++++++.+. ....++|++||..+ .++...    .      
T Consensus        79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~-~~~~~~----~------  147 (249)
T PRK06500         79 GRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINA-HIGMPN----S------  147 (249)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHh-ccCCCC----c------
Confidence             5799999998644221      112378999999999999999753 12257888888653 222211    1      


Q ss_pred             CCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCC---Cccccccc-cccCC-Cccccc
Q 043792          170 NWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTIS---NPYLKGAA-EMYED-GVMASV  241 (294)
Q Consensus       170 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~---~~~~~~~~-~~~~~-~~~~~v  241 (294)
                                  ..|+.+|.+.|.+++.++.+.   +++++++|||.++++.....   ........ .+... ....+.
T Consensus       148 ------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (249)
T PRK06500        148 ------------SVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFG  215 (249)
T ss_pred             ------------cHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCc
Confidence                        679999999999998887654   89999999999998852110   00000000 00000 011266


Q ss_pred             cHHHHHHHHHhhhcCc
Q 043792          242 DLRFYVDAHICVFEDV  257 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~  257 (294)
                      .++|+|++++.++..+
T Consensus       216 ~~~~va~~~~~l~~~~  231 (249)
T PRK06500        216 TPEEIAKAVLYLASDE  231 (249)
T ss_pred             CHHHHHHHHHHHcCcc
Confidence            8999999999988653

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.89  E-value=4.7e-21  Score=163.36  Aligned_cols=199  Identities=13%  Similarity=0.088  Sum_probs=145.6

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      ..+++|+||||+|+||+++++.|+++|++|++++|+.+..+.+.+++  .....++.++.+|++|.+++.++++      
T Consensus        38 ~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l--~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  115 (293)
T PRK05866         38 LTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRI--TRAGGDAMAVPCDLSDLDAVDALVADVEKRI  115 (293)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH--HhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45689999999999999999999999999999999876655554432  1223467889999999998888776      


Q ss_pred             -cCCEEEecCCCCCCCC--------cchhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS--------TYDELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPTSH  164 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~--------~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  164 (294)
                       ++|+||||||......        ...+..+++|+.++.++++++.    +. +..++|++||.++.......    . 
T Consensus       116 g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~p~----~-  189 (293)
T PRK05866        116 GGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLER-GDGHIINVATWGVLSEASPL----F-  189 (293)
T ss_pred             CCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcEEEEECChhhcCCCCCC----c-
Confidence             6899999998653321        1113678999999888888764    34 56799999997522100000    1 


Q ss_pred             CCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccccccCCCccccc
Q 043792          165 DFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASV  241 (294)
Q Consensus       165 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v  241 (294)
                                       ..|+.+|.+.+.+.+.++.+.   ++++++++||.+-.+....       ... .  .....+
T Consensus       190 -----------------~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~-------~~~-~--~~~~~~  242 (293)
T PRK05866        190 -----------------SVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAP-------TKA-Y--DGLPAL  242 (293)
T ss_pred             -----------------chHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccc-------ccc-c--cCCCCC
Confidence                             679999999999988887654   8999999999885554211       000 0  011246


Q ss_pred             cHHHHHHHHHhhhcCc
Q 043792          242 DLRFYVDAHICVFEDV  257 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~  257 (294)
                      ..+++|+.++.+++++
T Consensus       243 ~pe~vA~~~~~~~~~~  258 (293)
T PRK05866        243 TADEAAEWMVTAARTR  258 (293)
T ss_pred             CHHHHHHHHHHHHhcC
Confidence            8899999999999764

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.9e-21  Score=161.60  Aligned_cols=213  Identities=15%  Similarity=0.033  Sum_probs=151.1

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      ..+++||||||+|+||+++++.|+++|++|++++|+.........   .  ...++.++.+|+++++++.++++      
T Consensus        13 ~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~---~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   87 (255)
T PRK06841         13 LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQ---L--LGGNAKGLVCDVSDSQSVEAAVAAVISAF   87 (255)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---h--hCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            456899999999999999999999999999999997653222222   1  12356789999999998877765      


Q ss_pred             -cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                       ++|+|||+++.......      ..+..+++|+.++.++++++...   .+.++||++||..+. ++...    .    
T Consensus        88 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-~~~~~----~----  158 (255)
T PRK06841         88 GRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGV-VALER----H----  158 (255)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhc-cCCCC----C----
Confidence             46999999987543211      11267899999999999987643   245799999997532 22111    1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccc-ccc--CCCccccc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAA-EMY--EDGVMASV  241 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~-~~~--~~~~~~~v  241 (294)
                                    ..|+.+|.+.+.+.+.++.+   .++++++++||.+..+....   ...+.. ..+  ......+.
T Consensus       159 --------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~---~~~~~~~~~~~~~~~~~~~~  221 (255)
T PRK06841        159 --------------VAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKK---AWAGEKGERAKKLIPAGRFA  221 (255)
T ss_pred             --------------chHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCccccc---ccchhHHHHHHhcCCCCCCc
Confidence                          67999999999999988876   48999999999997765211   111111 001  01112288


Q ss_pred             cHHHHHHHHHhhhcCcC--CCCeEEeec
Q 043792          242 DLRFYVDAHICVFEDVS--SYGRYLCFN  267 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~~--~~~~~~~~~  267 (294)
                      +++|+|++++.++....  ..|+.+..+
T Consensus       222 ~~~~va~~~~~l~~~~~~~~~G~~i~~d  249 (255)
T PRK06841        222 YPEEIAAAALFLASDAAAMITGENLVID  249 (255)
T ss_pred             CHHHHHHHHHHHcCccccCccCCEEEEC
Confidence            99999999999987542  356654433

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.89  E-value=2.9e-21  Score=161.89  Aligned_cols=214  Identities=14%  Similarity=0.037  Sum_probs=149.8

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++||||||+|+||+++++.|+++|++|++++|+ +..+.+.+.  ......++.++.+|+++.+++.++++      
T Consensus        13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   89 (258)
T PRK06935         13 LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRL--IEKEGRKVTFVQVDLTKPESAEKVVKEALEEF   89 (258)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHH--HHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            456899999999999999999999999999999987 444444432  11223568899999999998887775      


Q ss_pred             -cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                       .+|++||+++......      ...+..+++|+.++.++++++.+.   ++.+++|++||..++......         
T Consensus        90 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  160 (258)
T PRK06935         90 GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFV---------  160 (258)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCc---------
Confidence             5799999998643211      112377899999988888776542   245789999998532211111         


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCcccccc-ccccCC-Ccccccc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGA-AEMYED-GVMASVD  242 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~-~~~~~~-~~~~~v~  242 (294)
                                    ..|+.+|.+.+.+.+.++.+.   |+++++++||.+..+....... .... ...... ....+..
T Consensus       161 --------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~  225 (258)
T PRK06935        161 --------------PAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRA-DKNRNDEILKRIPAGRWGE  225 (258)
T ss_pred             --------------hhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhccc-ChHHHHHHHhcCCCCCCCC
Confidence                          579999999999999998764   7999999999997765221100 0000 001111 1122788


Q ss_pred             HHHHHHHHHhhhcCcC--CCCeEE
Q 043792          243 LRFYVDAHICVFEDVS--SYGRYL  264 (294)
Q Consensus       243 v~D~a~~i~~~~~~~~--~~~~~~  264 (294)
                      .+|+|..++.++....  ..|..+
T Consensus       226 ~~dva~~~~~l~s~~~~~~~G~~i  249 (258)
T PRK06935        226 PDDLMGAAVFLASRASDYVNGHIL  249 (258)
T ss_pred             HHHHHHHHHHHcChhhcCCCCCEE
Confidence            8999999999886432  245533

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.89  E-value=6.6e-21  Score=162.27  Aligned_cols=217  Identities=12%  Similarity=0.037  Sum_probs=152.7

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC-hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK-LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      ..++|+||||||+|+||++++++|+++|++|++++|+... .+.+...  ......++.++.+|++|.+.+.++++    
T Consensus        43 ~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~--~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~  120 (290)
T PRK06701         43 KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQR--VEKEGVKCLLIPGDVSDEAFCKDAVEETVR  120 (290)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHH--HHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            4456899999999999999999999999999999987543 3333331  12223467889999999998877765    


Q ss_pred             ---cCCEEEecCCCCCCCCc-------chhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHST-------YDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~~-------~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                         ++|+|||+|+.......       .....+++|+.++.++++++.+. ....++|++||.+++. +...    .   
T Consensus       121 ~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~-~~~~----~---  192 (290)
T PRK06701        121 ELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYE-GNET----L---  192 (290)
T ss_pred             HcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccC-CCCC----c---
Confidence               47999999986432111       11378999999999999998764 1225899999976322 1111    1   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccc-ccc--CCCcccc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAA-EMY--EDGVMAS  240 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~-~~~--~~~~~~~  240 (294)
                                     ..|+.+|.+.+.+++.++.+.   ++++++++||.++.+......   .+.. ..+  ......+
T Consensus       193 ---------------~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~---~~~~~~~~~~~~~~~~~  254 (290)
T PRK06701        193 ---------------IDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDF---DEEKVSQFGSNTPMQRP  254 (290)
T ss_pred             ---------------chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccccc---CHHHHHHHHhcCCcCCC
Confidence                           569999999999999998774   899999999999887532111   1110 001  1112238


Q ss_pred             ccHHHHHHHHHhhhcCcC--CCCeE-Eeec
Q 043792          241 VDLRFYVDAHICVFEDVS--SYGRY-LCFN  267 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~~--~~~~~-~~~~  267 (294)
                      .+++|+|+++++++....  ..|.. .+.+
T Consensus       255 ~~~~dva~~~~~ll~~~~~~~~G~~i~idg  284 (290)
T PRK06701        255 GQPEELAPAYVFLASPDSSYITGQMLHVNG  284 (290)
T ss_pred             cCHHHHHHHHHHHcCcccCCccCcEEEeCC
Confidence            899999999999987643  34553 4443

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.89  E-value=5e-21  Score=159.26  Aligned_cols=216  Identities=17%  Similarity=0.078  Sum_probs=148.9

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC-hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK-LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .+++|+||||+|+||+++++.|+++|++|+++.|+..+ ...+.++  ......++.++.+|+.+.+++.++++      
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAE--IGALGGKALAVQGDVSDAESVERAVDEAKAEF   81 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHH--HHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45799999999999999999999999999888887653 2333332  12234578889999999998877765      


Q ss_pred             -cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                       ++|+|||+++.......      ..+..++.|+.++.++++++...   .+.++||++||..+ .++...    .    
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~-~~~~~~----~----  152 (248)
T PRK05557         82 GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVG-LMGNPG----Q----  152 (248)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEccccc-CcCCCC----C----
Confidence             57999999987543211      12367889999999999888754   25578999999742 333221    1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-cccccccccCCCccccccH
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YLKGAAEMYEDGVMASVDL  243 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~v~v  243 (294)
                                    ..|+.+|.+.+.+++.++.+   .++++++++|+.+.++....... ..+....  ......+.++
T Consensus       153 --------------~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  216 (248)
T PRK05557        153 --------------ANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPEDVKEAILA--QIPLGRLGQP  216 (248)
T ss_pred             --------------chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccChHHHHHHHh--cCCCCCCcCH
Confidence                          67999999999888877654   47999999999886554211100 0000000  0111227899


Q ss_pred             HHHHHHHHhhhcC--cCCCCe-EEeec
Q 043792          244 RFYVDAHICVFED--VSSYGR-YLCFN  267 (294)
Q Consensus       244 ~D~a~~i~~~~~~--~~~~~~-~~~~~  267 (294)
                      +|+++++..++..  ....|+ +.+.+
T Consensus       217 ~~va~~~~~l~~~~~~~~~g~~~~i~~  243 (248)
T PRK05557        217 EEIASAVAFLASDEAAYITGQTLHVNG  243 (248)
T ss_pred             HHHHHHHHHHcCcccCCccccEEEecC
Confidence            9999999888865  333455 44443

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.89  E-value=3.5e-21  Score=161.62  Aligned_cols=221  Identities=14%  Similarity=-0.029  Sum_probs=152.6

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++|+||||+|+||+++++.|+++|++|++++|+.+..+.+.+++.......++.++.+|++|++++.++++      
T Consensus         5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (260)
T PRK07063          5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF   84 (260)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            45689999999999999999999999999999999876665555432111124468899999999988887775      


Q ss_pred             -cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                       .+|++||+|+......      ...+..+++|+.++.++++++...   .+..++|++||..........         
T Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  155 (260)
T PRK07063         85 GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGC---------  155 (260)
T ss_pred             CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCc---------
Confidence             5799999998643211      112377899999999998887542   244689999997532211111         


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccc----cccC-CCccc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAA----EMYE-DGVMA  239 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~----~~~~-~~~~~  239 (294)
                                    ..|+.+|.+.+.+.+.++.+.   |+++++++||.+-.+.............    .... .....
T Consensus       156 --------------~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r  221 (260)
T PRK07063        156 --------------FPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKR  221 (260)
T ss_pred             --------------hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCC
Confidence                          679999999999999988764   7999999999986654211000000000    0000 01112


Q ss_pred             cccHHHHHHHHHhhhcCc--CCCCeEEeec
Q 043792          240 SVDLRFYVDAHICVFEDV--SSYGRYLCFN  267 (294)
Q Consensus       240 ~v~v~D~a~~i~~~~~~~--~~~~~~~~~~  267 (294)
                      +...+|+|.+++.++...  ...|+.+..+
T Consensus       222 ~~~~~~va~~~~fl~s~~~~~itG~~i~vd  251 (260)
T PRK07063        222 IGRPEEVAMTAVFLASDEAPFINATCITID  251 (260)
T ss_pred             CCCHHHHHHHHHHHcCccccccCCcEEEEC
Confidence            678999999999998653  2356544433

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.89  E-value=3.4e-21  Score=159.41  Aligned_cols=199  Identities=17%  Similarity=0.066  Sum_probs=145.9

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++|+||||+|+||++++++|+++|++|++++|++.+...+..++.  . ..++.++.+|+.|.+++.++++      
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~--~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELN--N-KGNVLGLAADVRDEADVQRAVDAIVAAF   80 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHh--c-cCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            446899999999999999999999999999999998765555544221  1 1468899999999998877775      


Q ss_pred             -cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                       ++|+|||+++......      ...+..+++|+.++.++++++.+.  .+.+++|++||..+.......          
T Consensus        81 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~----------  150 (237)
T PRK07326         81 GGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFAGG----------  150 (237)
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCCCC----------
Confidence             5899999998654321      112377899999999998887643  244689999987532111111          


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHH
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRF  245 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  245 (294)
                                   ..|+.+|.+.+.+.+.++.+   .+++++++||+.+.++....       .+   ......++..+|
T Consensus       151 -------------~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~-------~~---~~~~~~~~~~~d  207 (237)
T PRK07326        151 -------------AAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGH-------TP---SEKDAWKIQPED  207 (237)
T ss_pred             -------------chHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCccccc-------cc---chhhhccCCHHH
Confidence                         57999999999888887644   48999999999997654211       00   000112578999


Q ss_pred             HHHHHHhhhcCcC
Q 043792          246 YVDAHICVFEDVS  258 (294)
Q Consensus       246 ~a~~i~~~~~~~~  258 (294)
                      ++++++.++..+.
T Consensus       208 ~a~~~~~~l~~~~  220 (237)
T PRK07326        208 IAQLVLDLLKMPP  220 (237)
T ss_pred             HHHHHHHHHhCCc
Confidence            9999999997664

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.8e-21  Score=162.48  Aligned_cols=207  Identities=13%  Similarity=0.053  Sum_probs=148.0

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      ..+++||||||+|+||.++++.|+++|++|++++|+.++.+.+...+  .....++.++.+|+++++++.++++      
T Consensus         8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (263)
T PRK07814          8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQI--RAAGRRAHVVAADLAHPEATAGLAGQAVEAF   85 (263)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45689999999999999999999999999999999876555544432  1223468899999999998877665      


Q ss_pred             -cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc----CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT----NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                       ++|+|||+|+......      ......+++|+.++.++++++.+.    .+.+++|++||..+......     .   
T Consensus        86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-----~---  157 (263)
T PRK07814         86 GRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRG-----F---  157 (263)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCC-----C---
Confidence             5799999998643221      112378899999999999998742    24578999999753221111     1   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc--CCeEEEEecCceeCCCCCCCCccccccc--cccCC-Cccccc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR--GISMVSINGGLVMGPDVTISNPYLKGAA--EMYED-GVMASV  241 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ilrp~~i~G~~~~~~~~~~~~~~--~~~~~-~~~~~v  241 (294)
                                     ..|+.+|.+.+.+++.++.+.  .++++.++||.+..+.......  ....  ..... ....+.
T Consensus       158 ---------------~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~  220 (263)
T PRK07814        158 ---------------AAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAA--NDELRAPMEKATPLRRLG  220 (263)
T ss_pred             ---------------chhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccC--CHHHHHHHHhcCCCCCCc
Confidence                           679999999999999988764  5889999999987654211000  0000  11111 111267


Q ss_pred             cHHHHHHHHHhhhcCc
Q 043792          242 DLRFYVDAHICVFEDV  257 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~  257 (294)
                      .++|+|++++.++...
T Consensus       221 ~~~~va~~~~~l~~~~  236 (263)
T PRK07814        221 DPEDIAAAAVYLASPA  236 (263)
T ss_pred             CHHHHHHHHHHHcCcc
Confidence            8899999999998653

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.89  E-value=4.3e-21  Score=162.19  Aligned_cols=195  Identities=14%  Similarity=-0.010  Sum_probs=143.5

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------   97 (294)
                      ++++|+||||+|+||+++++.|+++|++|++++|+++..+.+..++      .++.++.+|++|++++.++++       
T Consensus         4 ~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (273)
T PRK07825          4 RGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAEL------GLVVGGPLDVTDPASFAAFLDAVEADLG   77 (273)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh------ccceEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999999876655444321      257889999999988776654       


Q ss_pred             cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           98 GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                      ++|++||++|.......      ...+.+++|+.++.++++++...   .+.+++|++||.++.......          
T Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  147 (273)
T PRK07825         78 PIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGM----------  147 (273)
T ss_pred             CCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCC----------
Confidence            46999999987543211      12378899999988887776432   266799999997633211111          


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHH
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRF  245 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  245 (294)
                                   ..|+.+|.+.+.+.+.++.+   .|+++++++|+.+..+..       .+..   ......+++++|
T Consensus       148 -------------~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~-------~~~~---~~~~~~~~~~~~  204 (273)
T PRK07825        148 -------------ATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELI-------AGTG---GAKGFKNVEPED  204 (273)
T ss_pred             -------------cchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhh-------cccc---cccCCCCCCHHH
Confidence                         67999999998887777655   489999999998855431       1110   111223789999


Q ss_pred             HHHHHHhhhcCcC
Q 043792          246 YVDAHICVFEDVS  258 (294)
Q Consensus       246 ~a~~i~~~~~~~~  258 (294)
                      +|++++.++.++.
T Consensus       205 va~~~~~~l~~~~  217 (273)
T PRK07825        205 VAAAIVGTVAKPR  217 (273)
T ss_pred             HHHHHHHHHhCCC
Confidence            9999999997654

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.89  E-value=4e-21  Score=160.45  Aligned_cols=200  Identities=16%  Similarity=0.062  Sum_probs=145.6

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc-----
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG-----   98 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-----   98 (294)
                      .+++++|||||+|+||+++++.|+++|++|++++|+.     +..      ...++.++.+|+++.+++.+++++     
T Consensus         6 ~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~~~------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   74 (252)
T PRK08220          6 FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----LTQ------EDYPFATFVLDVSDAAAVAQVCQRLLAET   74 (252)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----hhh------cCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            3468999999999999999999999999999999875     111      134688999999999988887753     


Q ss_pred             --CCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           99 --CSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        99 --~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                        +|+||||++......      ......+++|+.++.++++++...   .+..++|++||..+.. +...    .    
T Consensus        75 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~-~~~~----~----  145 (252)
T PRK08220         75 GPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHV-PRIG----M----  145 (252)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhcc-CCCC----C----
Confidence              799999998754321      112378999999999999987542   2446899999975321 1100    1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-------ccccccccc--CC
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-------YLKGAAEMY--ED  235 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-------~~~~~~~~~--~~  235 (294)
                                    ..|+.+|.+.+.+++.++.+   +++++++++||.++++.......       ...+.....  ..
T Consensus       146 --------------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (252)
T PRK08220        146 --------------AAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGI  211 (252)
T ss_pred             --------------chhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcC
Confidence                          67999999999999988876   68999999999999886321100       000000000  11


Q ss_pred             CccccccHHHHHHHHHhhhcCc
Q 043792          236 GVMASVDLRFYVDAHICVFEDV  257 (294)
Q Consensus       236 ~~~~~v~v~D~a~~i~~~~~~~  257 (294)
                      ....+++++|+|++++.++...
T Consensus       212 ~~~~~~~~~dva~~~~~l~~~~  233 (252)
T PRK08220        212 PLGKIARPQEIANAVLFLASDL  233 (252)
T ss_pred             CCcccCCHHHHHHHHHHHhcch
Confidence            1223899999999999988653

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.89  E-value=5.5e-21  Score=161.63  Aligned_cols=209  Identities=14%  Similarity=0.084  Sum_probs=146.2

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------c
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------G   98 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~   98 (294)
                      ||+++||||+|+||+++++.|+++|++|++++|+.+..+.+..        .++.++.+|+++.+++.++++       +
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   72 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA--------AGFTAVQLDVNDGAALARLAEELEAEHGG   72 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------CCCeEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            4789999999999999999999999999999998655444333        257888999999988877764       5


Q ss_pred             CCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCC
Q 043792           99 CSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERN  170 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~  170 (294)
                      +|+|||+++......      ...+..+++|+.++.++++++...  .+..++|++||..+......     .       
T Consensus        73 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----~-------  140 (274)
T PRK05693         73 LDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTPF-----A-------  140 (274)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCCC-----c-------
Confidence            799999998643221      112377899999999999887542  13468999999753221111     1       


Q ss_pred             CCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc----cccccccccC---------
Q 043792          171 WSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP----YLKGAAEMYE---------  234 (294)
Q Consensus       171 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~----~~~~~~~~~~---------  234 (294)
                                 ..|+.+|.+.+.+.+.++.+   +|+++++++||.+.++.......    ......+.++         
T Consensus       141 -----------~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (274)
T PRK05693        141 -----------GAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARA  209 (274)
T ss_pred             -----------cHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHH
Confidence                       67999999999998887765   58999999999997664221110    1111100000         


Q ss_pred             -CCccccccHHHHHHHHHhhhcCcCCCCeEEe
Q 043792          235 -DGVMASVDLRFYVDAHICVFEDVSSYGRYLC  265 (294)
Q Consensus       235 -~~~~~~v~v~D~a~~i~~~~~~~~~~~~~~~  265 (294)
                       .........+|+|+.++.+++++.....+..
T Consensus       210 ~~~~~~~~~~~~~a~~i~~~~~~~~~~~~~~~  241 (274)
T PRK05693        210 RASQDNPTPAAEFARQLLAAVQQSPRPRLVRL  241 (274)
T ss_pred             HhccCCCCCHHHHHHHHHHHHhCCCCCceEEe
Confidence             0011146789999999999986554333433

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.89  E-value=3e-21  Score=160.04  Aligned_cols=192  Identities=16%  Similarity=0.111  Sum_probs=144.0

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc----CCE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG----CSG  101 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~----~d~  101 (294)
                      |++|+||||+|+||+++++.|+++|++|++++|+++..+.+.+      ...++.++.+|++|.+++.+++++    .|.
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~   74 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHT------QSANIFTLAFDVTDHPGTKAALSQLPFIPEL   74 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH------hcCCCeEEEeeCCCHHHHHHHHHhcccCCCE
Confidence            4789999999999999999999999999999998655444433      224688999999999999988875    589


Q ss_pred             EEecCCCCCCCC---cc---hhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCCh
Q 043792          102 LFYSFEPPSDHS---TY---DELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDV  174 (294)
Q Consensus       102 Vih~a~~~~~~~---~~---~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~  174 (294)
                      +||+++......   ..   .++.+++|+.++.++++++... .+.+++|++||..+.. +...    .           
T Consensus        75 ~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~-~~~~----~-----------  138 (240)
T PRK06101         75 WIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASEL-ALPR----A-----------  138 (240)
T ss_pred             EEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhcc-CCCC----C-----------
Confidence            999987532111   11   1378999999999999998764 1235799999875322 1111    1           


Q ss_pred             hhhhhccchhHhhHHHHHHHHHHHHH---hcCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHHHHHHHH
Q 043792          175 NLCKKFKLWHGLSKTLAEKTAWALAM---DRGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHI  251 (294)
Q Consensus       175 ~~~~~~~~~Y~~sK~~~e~~~~~~~~---~~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~i~  251 (294)
                             ..|+.+|.+.+.+.+.++.   ..+++++++|||.++++......       ..  .  ..++..+|+|+.++
T Consensus       139 -------~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~-------~~--~--~~~~~~~~~a~~i~  200 (240)
T PRK06101        139 -------EAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNT-------FA--M--PMIITVEQASQEIR  200 (240)
T ss_pred             -------chhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCC-------CC--C--CcccCHHHHHHHHH
Confidence                   6799999999999988874   35899999999999887522110       00  0  01578999999999


Q ss_pred             hhhcCc
Q 043792          252 CVFEDV  257 (294)
Q Consensus       252 ~~~~~~  257 (294)
                      ..++++
T Consensus       201 ~~i~~~  206 (240)
T PRK06101        201 AQLARG  206 (240)
T ss_pred             HHHhcC
Confidence            999864

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.89  E-value=4.3e-21  Score=161.15  Aligned_cols=211  Identities=15%  Similarity=0.064  Sum_probs=150.3

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++++++||||+|+||+++++.|+++|++|++++|+.+..+.+..+     ...++.++.+|++|++++.++++     
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   77 (261)
T PRK08265          3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAAS-----LGERARFIATDITDDAAIERAVATVVAR   77 (261)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-----hCCeeEEEEecCCCHHHHHHHHHHHHHH
Confidence            34568999999999999999999999999999999987665555442     13468899999999998887765     


Q ss_pred             --cCCEEEecCCCCCCC-----CcchhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDH-----STYDELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~-----~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                        .+|++||||+.....     ....++.+++|+.++.++++++...  ++-.++|++||..+.. +...    .     
T Consensus        78 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~-~~~~----~-----  147 (261)
T PRK08265         78 FGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKF-AQTG----R-----  147 (261)
T ss_pred             hCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhcc-CCCC----C-----
Confidence              469999999864321     1112378899999999998876643  1346899999976322 2111    1     


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccc----cccC--CCccc
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAA----EMYE--DGVMA  239 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~----~~~~--~~~~~  239 (294)
                                   ..|+.+|.+.+.+.+.++.+.   ++++++++||.+..+....   +..+..    ....  .....
T Consensus       148 -------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~---~~~~~~~~~~~~~~~~~p~~r  211 (261)
T PRK08265        148 -------------WLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDE---LSGGDRAKADRVAAPFHLLGR  211 (261)
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhh---hcccchhHHHHhhcccCCCCC
Confidence                         679999999999999888663   7999999999987664211   111111    0000  01112


Q ss_pred             cccHHHHHHHHHhhhcCc--CCCCeEE
Q 043792          240 SVDLRFYVDAHICVFEDV--SSYGRYL  264 (294)
Q Consensus       240 ~v~v~D~a~~i~~~~~~~--~~~~~~~  264 (294)
                      +...+|+|++++.++...  ..+|+.+
T Consensus       212 ~~~p~dva~~~~~l~s~~~~~~tG~~i  238 (261)
T PRK08265        212 VGDPEEVAQVVAFLCSDAASFVTGADY  238 (261)
T ss_pred             ccCHHHHHHHHHHHcCccccCccCcEE
Confidence            677899999999998753  2355543

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.89  E-value=3.3e-21  Score=160.11  Aligned_cols=197  Identities=14%  Similarity=0.088  Sum_probs=145.6

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----cCCE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----GCSG  101 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----~~d~  101 (294)
                      ||+|+||||+|+||.++++.|+++|++|++++|+.++.+.+.+++.. ....++.++.+|++|++++.++++    .+|+
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~   79 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRA-RGAVAVSTHELDILDTASHAAFLDSLPALPDI   79 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHH-hcCCeEEEEecCCCChHHHHHHHHHHhhcCCE
Confidence            57899999999999999999999999999999987655544432211 123478999999999998887775    3699


Q ss_pred             EEecCCCCCCCCc---c---hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCC
Q 043792          102 LFYSFEPPSDHST---Y---DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWS  172 (294)
Q Consensus       102 Vih~a~~~~~~~~---~---~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~  172 (294)
                      |||+++.......   .   ..+.+++|+.++.++++++...   .+.+++|++||..+.. +...    .         
T Consensus        80 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-~~~~----~---------  145 (243)
T PRK07102         80 VLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDR-GRAS----N---------  145 (243)
T ss_pred             EEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccC-CCCC----C---------
Confidence            9999886432211   1   1267889999999999887643   2567999999974211 1111    1         


Q ss_pred             ChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHHHHHH
Q 043792          173 DVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDA  249 (294)
Q Consensus       173 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~  249 (294)
                               ..|+.+|...+.+.+.++.+   .|+++++++|+.++++....       ..  .  ....+..++|+|+.
T Consensus       146 ---------~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~-------~~--~--~~~~~~~~~~~a~~  205 (243)
T PRK07102        146 ---------YVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAG-------LK--L--PGPLTAQPEEVAKD  205 (243)
T ss_pred             ---------cccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhc-------cC--C--CccccCCHHHHHHH
Confidence                     57999999999999888654   48999999999998774211       00  0  11226789999999


Q ss_pred             HHhhhcCc
Q 043792          250 HICVFEDV  257 (294)
Q Consensus       250 i~~~~~~~  257 (294)
                      ++.++.++
T Consensus       206 i~~~~~~~  213 (243)
T PRK07102        206 IFRAIEKG  213 (243)
T ss_pred             HHHHHhCC
Confidence            99998864

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.89  E-value=3.3e-21  Score=162.68  Aligned_cols=202  Identities=11%  Similarity=-0.006  Sum_probs=146.1

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------cC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------GC   99 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~   99 (294)
                      |+|+||||+|+||+++++.|+++|++|++++|+.++.+.+..++  ...+.++.++.+|++|++++.++++       ++
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l--~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   78 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLL--REAGGDGFYQRCDVRDYSQLTALAQACEEKWGGI   78 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999876655544432  2234568889999999988877765       58


Q ss_pred             CEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHH----HhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCC
Q 043792          100 SGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEAC----AQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDER  169 (294)
Q Consensus       100 d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~  169 (294)
                      |+|||+++.......      ..+..+++|+.++.++.+++    .+. +..++|++||..+.......           
T Consensus        79 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~~~-----------  146 (270)
T PRK05650         79 DVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQ-KSGRIVNIASMAGLMQGPAM-----------  146 (270)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC-CCCEEEEECChhhcCCCCCc-----------
Confidence            999999987543211      11257889998888877764    444 66799999997532211111           


Q ss_pred             CCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCcccccccc---cc-CCCcccccc
Q 043792          170 NWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAAE---MY-EDGVMASVD  242 (294)
Q Consensus       170 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~~---~~-~~~~~~~v~  242 (294)
                                  ..|+.+|.+.+.+.+.++.+.   ++++++++|+.+.++....   +....+.   .. ......+++
T Consensus       147 ------------~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~~~~~~~~~~  211 (270)
T PRK05650        147 ------------SSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDS---FRGPNPAMKAQVGKLLEKSPIT  211 (270)
T ss_pred             ------------hHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccc---cccCchhHHHHHHHHhhcCCCC
Confidence                        679999999998888888763   7999999999998775221   1111110   00 001123689


Q ss_pred             HHHHHHHHHhhhcCc
Q 043792          243 LRFYVDAHICVFEDV  257 (294)
Q Consensus       243 v~D~a~~i~~~~~~~  257 (294)
                      ++|+|+.++.++.++
T Consensus       212 ~~~vA~~i~~~l~~~  226 (270)
T PRK05650        212 AADIADYIYQQVAKG  226 (270)
T ss_pred             HHHHHHHHHHHHhCC
Confidence            999999999999764

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.88  E-value=5.8e-21  Score=159.60  Aligned_cols=219  Identities=13%  Similarity=0.027  Sum_probs=152.0

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .+++++|||||+|+||+++++.|+++|++|++++|+.+..+.+.+++  .....++.++.+|++|++++.++++      
T Consensus         7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T PRK05867          7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEI--GTSGGKVVPVCCDVSQHQQVTSMLDQVTAEL   84 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHH--HhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999999876666555432  1223467889999999998877764      


Q ss_pred             -cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc---CC-CcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT---NT-VDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~---~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                       .+|++|||++.......      ..++.+++|+.++..+++++...   ++ -.++|++||..+.......    .   
T Consensus        85 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~----~---  157 (253)
T PRK05867         85 GGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQ----Q---  157 (253)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCC----C---
Confidence             57999999987543211      11267889999999999887543   12 2479999886422111000    0   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccccccCCCccccccH
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDL  243 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v  243 (294)
                              .      ..|+.+|.+.+.+.+.++.+.   |+++.+++||.+-.+.........+......+.  ..+..+
T Consensus       158 --------~------~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~--~r~~~p  221 (253)
T PRK05867        158 --------V------SHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEYQPLWEPKIPL--GRLGRP  221 (253)
T ss_pred             --------c------cchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHHHHHHHhcCCC--CCCcCH
Confidence                    0      569999999999999988664   899999999999766421110000000001111  127889


Q ss_pred             HHHHHHHHhhhcCcC--CCCeEEeec
Q 043792          244 RFYVDAHICVFEDVS--SYGRYLCFN  267 (294)
Q Consensus       244 ~D~a~~i~~~~~~~~--~~~~~~~~~  267 (294)
                      +|+|++++.++....  .+|+.+..+
T Consensus       222 ~~va~~~~~L~s~~~~~~tG~~i~vd  247 (253)
T PRK05867        222 EELAGLYLYLASEASSYMTGSDIVID  247 (253)
T ss_pred             HHHHHHHHHHcCcccCCcCCCeEEEC
Confidence            999999999986532  355544433

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.88  E-value=4.9e-21  Score=160.33  Aligned_cols=218  Identities=15%  Similarity=0.054  Sum_probs=154.5

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++++|+||||+|+||+.+++.|+++|++|++++|+.+..+.+..++  .....++.++.+|++|++++.++++     
T Consensus         8 ~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (256)
T PRK06124          8 SLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAAL--RAAGGAAEALAFDIADEEAVAAAFARIDAE   85 (256)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHH--HhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            456799999999999999999999999999999999876555444432  1233468899999999998887765     


Q ss_pred             --cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                        .+|+|||+++.......      ..++.+++|+.++.++++++.+.   .+.+++|++||..+.. +...    .   
T Consensus        86 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~-~~~~----~---  157 (256)
T PRK06124         86 HGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQV-ARAG----D---  157 (256)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhcc-CCCC----c---
Confidence              35999999986443211      11267899999999999776542   1567999999975322 1111    1   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccc-ccc--CCCcccc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAA-EMY--EDGVMAS  240 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~-~~~--~~~~~~~  240 (294)
                                     ..|+.+|.+.+.+++.++.+.   ++++++++|+.+.++......  ..... ..+  ......|
T Consensus       158 ---------------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~  220 (256)
T PRK06124        158 ---------------AVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMA--ADPAVGPWLAQRTPLGRW  220 (256)
T ss_pred             ---------------cHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhc--cChHHHHHHHhcCCCCCC
Confidence                           679999999999988877653   799999999999887521110  00000 000  0111238


Q ss_pred             ccHHHHHHHHHhhhcCcC--CCCeEEeec
Q 043792          241 VDLRFYVDAHICVFEDVS--SYGRYLCFN  267 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~~--~~~~~~~~~  267 (294)
                      ++++|++.+++.++..+.  ..|+++..+
T Consensus       221 ~~~~~~a~~~~~l~~~~~~~~~G~~i~~d  249 (256)
T PRK06124        221 GRPEEIAGAAVFLASPAASYVNGHVLAVD  249 (256)
T ss_pred             CCHHHHHHHHHHHcCcccCCcCCCEEEEC
Confidence            999999999999997653  346655443

>PRK08643 acetoin reductase; Validated

Probab=99.88  E-value=6.9e-21  Score=159.42  Aligned_cols=217  Identities=15%  Similarity=0.097  Sum_probs=150.1

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------c
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------G   98 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~   98 (294)
                      +++++||||+|+||+++++.|+++|++|++++|+.+..+.+..++  .....++.++.+|+++++++.++++       +
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKL--SKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGD   79 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            579999999999999999999999999999999876655554432  1223467889999999998877765       4


Q ss_pred             CCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc----CCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           99 CSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT----NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                      +|+||||++.......      ..+..+++|+.++..+++++.+.    +...++|++||..+. ++...    .     
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-~~~~~----~-----  149 (256)
T PRK08643         80 LNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGV-VGNPE----L-----  149 (256)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccc-cCCCC----C-----
Confidence            7999999986432211      11367889999988877776543    123589999997532 22111    1     


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-c--cccccc------ccCC-
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-Y--LKGAAE------MYED-  235 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~--~~~~~~------~~~~-  235 (294)
                                   ..|+.+|.+.+.+++.++.+   .|+++++++||.+.++....... .  ..+.+.      .... 
T Consensus       150 -------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (256)
T PRK08643        150 -------------AVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDI  216 (256)
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccC
Confidence                         67999999999999888865   47999999999998775221000 0  000110      0011 


Q ss_pred             CccccccHHHHHHHHHhhhcCc--CCCCeEEeec
Q 043792          236 GVMASVDLRFYVDAHICVFEDV--SSYGRYLCFN  267 (294)
Q Consensus       236 ~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~  267 (294)
                      ....+...+|+|.++..++...  ..+|..+..+
T Consensus       217 ~~~~~~~~~~va~~~~~L~~~~~~~~~G~~i~vd  250 (256)
T PRK08643        217 TLGRLSEPEDVANCVSFLAGPDSDYITGQTIIVD  250 (256)
T ss_pred             CCCCCcCHHHHHHHHHHHhCccccCccCcEEEeC
Confidence            1112778999999999998654  3456654433

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.88  E-value=4.4e-21  Score=160.64  Aligned_cols=206  Identities=19%  Similarity=0.148  Sum_probs=142.7

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-cCCEEEe
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-GCSGLFY  104 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-~~d~Vih  104 (294)
                      +++||||||+|+||+++++.|+++|++|++++|+......+....  .....++.++.+|++|++++.+++. ++|+|||
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~   79 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEA--ARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLN   79 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEE
Confidence            578999999999999999999999999999999865544444321  1223468899999999999998887 7999999


Q ss_pred             cCCCCCCCCc------chhhhHhHhhHHHHHHHHHH----HhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCCh
Q 043792          105 SFEPPSDHST------YDELTAEVETMAAHNVLEAC----AQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDV  174 (294)
Q Consensus       105 ~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~  174 (294)
                      |++.......      ..+..+++|+.++.++.+++    .+. +.++||++||..+.......                
T Consensus        80 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~SS~~~~~~~~~~----------------  142 (257)
T PRK09291         80 NAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVAR-GKGKVVFTSSMAGLITGPFT----------------  142 (257)
T ss_pred             CCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEcChhhccCCCCc----------------
Confidence            9986543211      11267888998877766654    344 55899999997532211111                


Q ss_pred             hhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc----ccccccc-c-cCCC--ccccccH
Q 043792          175 NLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP----YLKGAAE-M-YEDG--VMASVDL  243 (294)
Q Consensus       175 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~----~~~~~~~-~-~~~~--~~~~v~v  243 (294)
                             ..|+.+|.+.|.+.+.++.+   .|++++++|||.+..+.......    +...... + ..+.  ...++..
T Consensus       143 -------~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (257)
T PRK09291        143 -------GAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPLEQFDP  215 (257)
T ss_pred             -------chhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccccCCCH
Confidence                   67999999999988877654   58999999999875432110000    1111110 0 1111  1125789


Q ss_pred             HHHHHHHHhhhcCc
Q 043792          244 RFYVDAHICVFEDV  257 (294)
Q Consensus       244 ~D~a~~i~~~~~~~  257 (294)
                      +|+++.++.++..+
T Consensus       216 ~~~~~~~~~~l~~~  229 (257)
T PRK09291        216 QEMIDAMVEVIPAD  229 (257)
T ss_pred             HHHHHHHHHHhcCC
Confidence            99999999888654

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.1e-20  Score=162.32  Aligned_cols=185  Identities=14%  Similarity=0.033  Sum_probs=127.8

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      +.++++|+||||+|+||+++++.|+++|++|++++|+.++.....+++.......++.++.+|+.|.+++.++++     
T Consensus        13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   92 (306)
T PRK06197         13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA   92 (306)
T ss_pred             cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh
Confidence            446789999999999999999999999999999999876554433322111123468899999999998887765     


Q ss_pred             --cCCEEEecCCCCCCCC----cchhhhHhHhhHHH----HHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS----TYDELTAEVETMAA----HNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~----~~~~~~~~~n~~~~----~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                        ++|+|||||+......    ...+..+++|+.++    ..+++.+++. +.+++|++||.++..++...    .....
T Consensus        93 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~vSS~~~~~~~~~~----~~~~~  167 (306)
T PRK06197         93 YPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPV-PGSRVVTVSSGGHRIRAAIH----FDDLQ  167 (306)
T ss_pred             CCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhC-CCCEEEEECCHHHhccCCCC----ccccC
Confidence              4799999998643221    12236789999994    4555555555 55799999998644433211    00111


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEE--EecCceeCCC
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVS--INGGLVMGPD  218 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i--lrp~~i~G~~  218 (294)
                      +..+..+.      ..|+.||.+.+.+.+.++.+.   ++++++  +.||.+..+.
T Consensus       168 ~~~~~~~~------~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~  217 (306)
T PRK06197        168 WERRYNRV------AAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTEL  217 (306)
T ss_pred             cccCCCcH------HHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcc
Confidence            11111222      679999999999999888764   555554  4799886554

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.88  E-value=7.8e-21  Score=164.15  Aligned_cols=207  Identities=14%  Similarity=0.014  Sum_probs=149.0

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ...+++|+||||+|+||+++++.|+++|++|++++|+.+..+.+.+++  ...+.++.++.+|++|.+++.++++     
T Consensus         4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~--~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~   81 (330)
T PRK06139          4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEEC--RALGAEVLVVPTDVTDADQVKALATQAASF   81 (330)
T ss_pred             CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH--HhcCCcEEEEEeeCCCHHHHHHHHHHHHHh
Confidence            455789999999999999999999999999999999877665555432  1234467888999999998887764     


Q ss_pred             --cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                        .+|++||||+.......      ..++.+++|+.++.++.+++...   .+..++|++||..++.....     .   
T Consensus        82 ~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~-----~---  153 (330)
T PRK06139         82 GGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPY-----A---  153 (330)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCC-----c---
Confidence              57999999986443211      11378999999999888776432   14468999999753221111     1   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh----cCCeEEEEecCceeCCCCCCCCccccccccccCCCcccccc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD----RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVD  242 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~  242 (294)
                                     ..|+.+|.+.+.+.+.++.+    .+++++++.||.+.++.............    .....+++
T Consensus       154 ---------------~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~~~~~----~~~~~~~~  214 (330)
T PRK06139        154 ---------------AAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYTGRRL----TPPPPVYD  214 (330)
T ss_pred             ---------------hhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccccccccccc----cCCCCCCC
Confidence                           67999999988888877665    37999999999998876322111111110    01122678


Q ss_pred             HHHHHHHHHhhhcCcC
Q 043792          243 LRFYVDAHICVFEDVS  258 (294)
Q Consensus       243 v~D~a~~i~~~~~~~~  258 (294)
                      .+|+|++++.++.++.
T Consensus       215 pe~vA~~il~~~~~~~  230 (330)
T PRK06139        215 PRRVAKAVVRLADRPR  230 (330)
T ss_pred             HHHHHHHHHHHHhCCC
Confidence            9999999999997653

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=8.8e-21  Score=157.79  Aligned_cols=214  Identities=16%  Similarity=0.043  Sum_probs=150.3

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEE-ecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAA-LHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      .++++||||||+|+||+++++.|+++|++|+++ +|+.++...+...+  .....++.++.+|++|++++.++++     
T Consensus         3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T PRK05565          3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEI--KEEGGDAIAVKADVSSEEDVENLVEQIVEK   80 (247)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH--HhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            346799999999999999999999999999998 88766555444422  1223468899999999998877765     


Q ss_pred             --cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                        ++|+|||+++......      ...+..+++|+.++.++++++...   .+.+++|++||.+.+. +...    .   
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~-~~~~----~---  152 (247)
T PRK05565         81 FGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLI-GASC----E---  152 (247)
T ss_pred             hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhcc-CCCC----c---
Confidence              6899999998753211      112377899999988888877643   2457899999976332 2211    1   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCcccccccc-cc-CCCccccc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAE-MY-EDGVMASV  241 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~-~~-~~~~~~~v  241 (294)
                                     ..|+.+|.+.+.+++.++.+   .+++++++|||.+.++......   ..... .. ......+.
T Consensus       153 ---------------~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~  214 (247)
T PRK05565        153 ---------------VLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFS---EEDKEGLAEEIPLGRLG  214 (247)
T ss_pred             ---------------cHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccC---hHHHHHHHhcCCCCCCC
Confidence                           57999999998888887765   3899999999998665422111   11110 00 01112267


Q ss_pred             cHHHHHHHHHhhhcCc--CCCCeEEe
Q 043792          242 DLRFYVDAHICVFEDV--SSYGRYLC  265 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~--~~~~~~~~  265 (294)
                      .++|++++++.++...  ..+|+++.
T Consensus       215 ~~~~va~~~~~l~~~~~~~~~g~~~~  240 (247)
T PRK05565        215 KPEEIAKVVLFLASDDASYITGQIIT  240 (247)
T ss_pred             CHHHHHHHHHHHcCCccCCccCcEEE
Confidence            8999999999998653  33566543

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.88  E-value=9.4e-21  Score=158.43  Aligned_cols=216  Identities=13%  Similarity=0.028  Sum_probs=151.6

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      ..++++|||||+|+||++++++|+++|++|++++|+.++.+.+..++  .....++.++.+|++|++++.+++.      
T Consensus         7 l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l--~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (254)
T PRK08085          7 LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKL--RQEGIKAHAAPFNVTHKQEVEAAIEHIEKDI   84 (254)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHH--HhcCCeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            45789999999999999999999999999999999876655544432  1223467788999999998887764      


Q ss_pred             -cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                       .+|+|||+++......      ...+..+++|+.++.++++++.+.   .+..++|++||..+.. +...    .    
T Consensus        85 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-~~~~----~----  155 (254)
T PRK08085         85 GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSEL-GRDT----I----  155 (254)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhcc-CCCC----C----
Confidence             3799999998643211      112368999999999988877653   2457899999975321 1111    1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCcccccccc-cc-CCCcccccc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAAE-MY-EDGVMASVD  242 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~~-~~-~~~~~~~v~  242 (294)
                                    ..|+.+|.+.+.+++.++.+.   |+++++++||.+.++....... ...... .. ......+..
T Consensus       156 --------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~-~~~~~~~~~~~~p~~~~~~  220 (254)
T PRK08085        156 --------------TPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVE-DEAFTAWLCKRTPAARWGD  220 (254)
T ss_pred             --------------cchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhcc-CHHHHHHHHhcCCCCCCcC
Confidence                          679999999999999988663   8999999999998875321100 000000 00 011122788


Q ss_pred             HHHHHHHHHhhhcCc--CCCCeEEe
Q 043792          243 LRFYVDAHICVFEDV--SSYGRYLC  265 (294)
Q Consensus       243 v~D~a~~i~~~~~~~--~~~~~~~~  265 (294)
                      .+|+|.+++.++...  ..+|+.+.
T Consensus       221 ~~~va~~~~~l~~~~~~~i~G~~i~  245 (254)
T PRK08085        221 PQELIGAAVFLSSKASDFVNGHLLF  245 (254)
T ss_pred             HHHHHHHHHHHhCccccCCcCCEEE
Confidence            999999999988743  33555443

>PRK07985 oxidoreductase; Provisional

Probab=99.88  E-value=9.1e-21  Score=161.71  Aligned_cols=214  Identities=12%  Similarity=0.000  Sum_probs=147.8

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC--ChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG--KLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~--~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      .++++++||||+|+||+++++.|+++|++|++..|+.+  ..+.+.+.  ......++.++.+|++|.+++.++++    
T Consensus        47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  124 (294)
T PRK07985         47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKI--IEECGRKAVLLPGDLSDEKFARSLVHEAHK  124 (294)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHH--HHHcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            34589999999999999999999999999998876543  23333331  11223467889999999988876654    


Q ss_pred             ---cCCEEEecCCCCCCC-------CcchhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDH-------STYDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~-------~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                         ++|++||+|+.....       .....+.+++|+.++.++++++... ..-.+||++||..++......        
T Consensus       125 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~~--------  196 (294)
T PRK07985        125 ALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHL--------  196 (294)
T ss_pred             HhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCCc--------
Confidence               479999999853211       1112378999999999999998754 122589999998632211111        


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCC--Cccccc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYED--GVMASV  241 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~--~~~~~v  241 (294)
                                     ..|+.+|.+.+.+.+.++.+   +|+++.+++||.++++...... ........+..  ....+.
T Consensus       197 ---------------~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~r~~  260 (294)
T PRK07985        197 ---------------LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGG-QTQDKIPQFGQQTPMKRAG  260 (294)
T ss_pred             ---------------chhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccC-CCHHHHHHHhccCCCCCCC
Confidence                           67999999999999998876   4899999999999988632111 00000000100  111267


Q ss_pred             cHHHHHHHHHhhhcCcC--CCCeE
Q 043792          242 DLRFYVDAHICVFEDVS--SYGRY  263 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~~--~~~~~  263 (294)
                      ..+|+|++++.++....  ..|..
T Consensus       261 ~pedva~~~~fL~s~~~~~itG~~  284 (294)
T PRK07985        261 QPAELAPVYVYLASQESSYVTAEV  284 (294)
T ss_pred             CHHHHHHHHHhhhChhcCCccccE
Confidence            89999999999986543  24553

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.88  E-value=4.4e-21  Score=161.01  Aligned_cols=202  Identities=15%  Similarity=0.060  Sum_probs=145.1

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--------
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--------   97 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--------   97 (294)
                      |++||||||+|+||++++++|+++|++|++++|+.+..+.+...+    .+.++.++.+|++|.+++.++++        
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   76 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAEL----GAGNAWTGALDVTDRAAWDAALADFAAATGG   76 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh----cCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            478999999999999999999999999999999877665554421    13478999999999988877765        


Q ss_pred             cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           98 GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                      ++|+|||||+......      ...+..+++|+.++.++++++...   .+..++|++||..+ .++...    .     
T Consensus        77 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~-~~~~~~----~-----  146 (260)
T PRK08267         77 RLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASA-IYGQPG----L-----  146 (260)
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhh-CcCCCC----c-----
Confidence            3599999998754321      112378999999999998887532   24578999999753 222211    1     


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHH
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRF  245 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  245 (294)
                                   ..|+.+|.+.+.+.+.++.+   .++++++++|+.+..+.........  ........ ...+..+|
T Consensus       147 -------------~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~--~~~~~~~~-~~~~~~~~  210 (260)
T PRK08267        147 -------------AVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEV--DAGSTKRL-GVRLTPED  210 (260)
T ss_pred             -------------hhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccchh--hhhhHhhc-cCCCCHHH
Confidence                         67999999999999888755   4799999999998655421100000  00001011 11467799


Q ss_pred             HHHHHHhhhcCc
Q 043792          246 YVDAHICVFEDV  257 (294)
Q Consensus       246 ~a~~i~~~~~~~  257 (294)
                      +|++++.++...
T Consensus       211 va~~~~~~~~~~  222 (260)
T PRK08267        211 VAEAVWAAVQHP  222 (260)
T ss_pred             HHHHHHHHHhCC
Confidence            999999998653

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.88  E-value=8.9e-21  Score=158.40  Aligned_cols=214  Identities=14%  Similarity=0.084  Sum_probs=149.3

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++++|+||||+|+||.++++.|+++|++|++++|+.+..+.+.+++  .....++.++.+|+.+.+++.++++     
T Consensus         5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (252)
T PRK07035          5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAI--VAAGGKAEALACHIGEMEQIDALFAHIRER   82 (252)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            445689999999999999999999999999999999876655554432  1223457789999999988877664     


Q ss_pred             --cCCEEEecCCCCCC-----CCc--chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSD-----HST--YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 --~~d~Vih~a~~~~~-----~~~--~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                        .+|+|||+++....     ...  ..+..+++|+.++..+++++.+.   .+..++|++||..+.......       
T Consensus        83 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-------  155 (252)
T PRK07035         83 HGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQ-------  155 (252)
T ss_pred             cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCC-------
Confidence              47999999985321     111  12368899999998888776432   255799999997532211111       


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccc---cccCC-Ccc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAA---EMYED-GVM  238 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~---~~~~~-~~~  238 (294)
                                      ..|+.+|.+.+.+++.++.+.   |+++++++||.+..+....   ......   ..... ...
T Consensus       156 ----------------~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~---~~~~~~~~~~~~~~~~~~  216 (252)
T PRK07035        156 ----------------GIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASA---LFKNDAILKQALAHIPLR  216 (252)
T ss_pred             ----------------cchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCccccc---ccCCHHHHHHHHccCCCC
Confidence                            679999999999999998764   7999999999986554211   111110   00000 111


Q ss_pred             ccccHHHHHHHHHhhhcCcC--CCCeEE
Q 043792          239 ASVDLRFYVDAHICVFEDVS--SYGRYL  264 (294)
Q Consensus       239 ~~v~v~D~a~~i~~~~~~~~--~~~~~~  264 (294)
                      .+..++|+|++++.++.+..  ..|+.+
T Consensus       217 ~~~~~~~va~~~~~l~~~~~~~~~g~~~  244 (252)
T PRK07035        217 RHAEPSEMAGAVLYLASDASSYTTGECL  244 (252)
T ss_pred             CcCCHHHHHHHHHHHhCccccCccCCEE
Confidence            26788999999999887543  355543

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.88  E-value=3.7e-21  Score=166.39  Aligned_cols=193  Identities=18%  Similarity=0.078  Sum_probs=132.1

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++++|+||||+|+||+++++.|+++|++|++++|+.++.+.+.+++  .....++.++.+|++|.+++.++++     
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l--~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   80 (322)
T PRK07453          3 QDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQEL--GIPPDSYTIIHIDLGDLDSVRRFVDDFRAL   80 (322)
T ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--hccCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence            345789999999999999999999999999999999876655554432  1223468899999999998887775     


Q ss_pred             --cCCEEEecCCCCCCC----C-c--chhhhHhHhhHHHHHHHHHHHhc---CC--CcEEEEecCcceeeeCCC-CCCCC
Q 043792           98 --GCSGLFYSFEPPSDH----S-T--YDELTAEVETMAAHNVLEACAQT---NT--VDKVVFTSSLTAVVWNNH-RDNPT  162 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~----~-~--~~~~~~~~n~~~~~~ll~~~~~~---~~--~~~~v~~Ss~~~~~~~~~-~~~~~  162 (294)
                        ++|+|||+||.....    . .  ..+..+++|+.++.++++++...   .+  ..|+|++||..+.. +.. ...+.
T Consensus        81 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~-~~~~~~~~~  159 (322)
T PRK07453         81 GKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANP-KELGGKIPI  159 (322)
T ss_pred             CCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCc-cccCCccCC
Confidence              389999999864321    1 1  12377899999999998887643   12  35999999976322 110 00000


Q ss_pred             CCCCCCCCC-------CCh-----hhhhhccchhHhhHHHHHHHHHHHHHhc----CCeEEEEecCceeCCC
Q 043792          163 SHDFDERNW-------SDV-----NLCKKFKLWHGLSKTLAEKTAWALAMDR----GISMVSINGGLVMGPD  218 (294)
Q Consensus       163 ~~~~~e~~~-------~~~-----~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~ilrp~~i~G~~  218 (294)
                      ..+.+.++.       ..+     .....+...|+.||.+.+.+.+.+++++    |++++++|||+|++..
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~  231 (322)
T PRK07453        160 PAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTP  231 (322)
T ss_pred             CCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCc
Confidence            000000000       000     0001122789999999988888887664    7999999999998654

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.2e-20  Score=157.28  Aligned_cols=197  Identities=18%  Similarity=0.142  Sum_probs=145.6

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------c
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------G   98 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~   98 (294)
                      +++++||||+|+||++++++|+++|++|++++|+.++.+.+..++.......++.++.+|++|.+++.++++       +
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999999876665554432221224468899999999988877664       5


Q ss_pred             CCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           99 CSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                      +|+|||+++......      ....+.+++|+.++.++++++.    +. +.++||++||..+.. +...    .     
T Consensus        82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~sS~~~~~-~~~~----~-----  150 (248)
T PRK08251         82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQ-GSGHLVLISSVSAVR-GLPG----V-----  150 (248)
T ss_pred             CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCeEEEEecccccc-CCCC----C-----
Confidence            799999998644321      1123678999999999888764    33 567999999975322 2110    0     


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHH
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRF  245 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  245 (294)
                            .      ..|+.+|.+.+.+.+.++.+.   ++++++++||.+.++......       .     ...++..+|
T Consensus       151 ------~------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~-------~-----~~~~~~~~~  206 (248)
T PRK08251        151 ------K------AAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAK-------S-----TPFMVDTET  206 (248)
T ss_pred             ------c------ccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhccc-------c-----CCccCCHHH
Confidence                  0      579999999999988887653   799999999999765421110       0     112678999


Q ss_pred             HHHHHHhhhcCc
Q 043792          246 YVDAHICVFEDV  257 (294)
Q Consensus       246 ~a~~i~~~~~~~  257 (294)
                      .|++++.+++++
T Consensus       207 ~a~~i~~~~~~~  218 (248)
T PRK08251        207 GVKALVKAIEKE  218 (248)
T ss_pred             HHHHHHHHHhcC
Confidence            999999999754

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.88  E-value=7.6e-21  Score=164.84  Aligned_cols=205  Identities=14%  Similarity=0.014  Sum_probs=145.8

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ...+++|+||||+|+||+++++.|+++|++|++++|+.+..+.+.+++  ...+.++.++.+|++|.+++.++++     
T Consensus         5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l--~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~   82 (334)
T PRK07109          5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEI--RAAGGEALAVVADVADAEAVQAAADRAEEE   82 (334)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH--HHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            345689999999999999999999999999999999876655554432  2234568899999999998887764     


Q ss_pred             --cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                        .+|++||+++......      ...+..+++|+.+..++.+++.    +. +..+||++||..++.....     .  
T Consensus        83 ~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~-~~g~iV~isS~~~~~~~~~-----~--  154 (334)
T PRK07109         83 LGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPR-DRGAIIQVGSALAYRSIPL-----Q--  154 (334)
T ss_pred             CCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEeCChhhccCCCc-----c--
Confidence              5799999998643221      1113778899888777655544    44 4578999999863321111     1  


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh-----cCCeEEEEecCceeCCCCCCCCccccccccccCCCcccc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD-----RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMAS  240 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~  240 (294)
                                      ..|+.+|.+.+.+.+.++.+     .++++++++|+.+.++............    ......+
T Consensus       155 ----------------~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~~~~~----~~~~~~~  214 (334)
T PRK07109        155 ----------------SAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSRLPVE----PQPVPPI  214 (334)
T ss_pred             ----------------hHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhhcccc----ccCCCCC
Confidence                            67999999999888877655     2699999999999776521111011100    1111236


Q ss_pred             ccHHHHHHHHHhhhcCc
Q 043792          241 VDLRFYVDAHICVFEDV  257 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~  257 (294)
                      ..++|+|++++.++.++
T Consensus       215 ~~pe~vA~~i~~~~~~~  231 (334)
T PRK07109        215 YQPEVVADAILYAAEHP  231 (334)
T ss_pred             CCHHHHHHHHHHHHhCC
Confidence            78999999999999865

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.88  E-value=6.3e-21  Score=158.87  Aligned_cols=216  Identities=12%  Similarity=0.058  Sum_probs=145.8

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecC-CCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHN-HGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------   97 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------   97 (294)
                      +++|+||||+|+||++++++|+++|++|+...++ ++....+...+  ...+.++.++.+|++|.+++.++++       
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAI--RRQGGEALAVAADVADEADVLRLFEAVDRELG   79 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHH--HhCCCcEEEEEeccCCHHHHHHHHHHHHHHhC
Confidence            4689999999999999999999999998877644 33333333221  1223467889999999998888775       


Q ss_pred             cCCEEEecCCCCCCCCc-------chhhhHhHhhHHHHHHHHHHHhc---C---CCcEEEEecCcceeeeCCCCCCCCCC
Q 043792           98 GCSGLFYSFEPPSDHST-------YDELTAEVETMAAHNVLEACAQT---N---TVDKVVFTSSLTAVVWNNHRDNPTSH  164 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~~-------~~~~~~~~n~~~~~~ll~~~~~~---~---~~~~~v~~Ss~~~~~~~~~~~~~~~~  164 (294)
                      .+|+|||+++.......       .....+++|+.++.++++++.+.   .   .-.++|++||.++. ++...    ..
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~-~~~~~----~~  154 (248)
T PRK06123         80 RLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAAR-LGSPG----EY  154 (248)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhc-CCCCC----Cc
Confidence            57999999987543211       11277999999999998887653   0   12369999997532 22211    00


Q ss_pred             CCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc--cccccccccCCCccc
Q 043792          165 DFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP--YLKGAAEMYEDGVMA  239 (294)
Q Consensus       165 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~--~~~~~~~~~~~~~~~  239 (294)
                                       ..|+.+|.+.+.+++.++.+.   +++++++||+.++++.......  ..+......+  ...
T Consensus       155 -----------------~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p--~~~  215 (248)
T PRK06123        155 -----------------IDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIP--MGR  215 (248)
T ss_pred             -----------------cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHHHHhcCC--CCC
Confidence                             359999999999999888764   8999999999999986321110  0000000001  111


Q ss_pred             cccHHHHHHHHHhhhcCcC--CCCe-EEeec
Q 043792          240 SVDLRFYVDAHICVFEDVS--SYGR-YLCFN  267 (294)
Q Consensus       240 ~v~v~D~a~~i~~~~~~~~--~~~~-~~~~~  267 (294)
                      +.+++|++++++.++....  ..|+ |.+.+
T Consensus       216 ~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~g  246 (248)
T PRK06123        216 GGTAEEVARAILWLLSDEASYTTGTFIDVSG  246 (248)
T ss_pred             CcCHHHHHHHHHHHhCccccCccCCEEeecC
Confidence            4578999999999887542  3454 44443

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.88  E-value=9.5e-21  Score=158.30  Aligned_cols=215  Identities=10%  Similarity=-0.027  Sum_probs=151.8

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      ..+++|+||||+|+||++++++|+++|++|++++|+.+..+.+.+++  ...+.++.++.+|++|.+++.++++      
T Consensus         5 l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   82 (253)
T PRK06172          5 FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALI--REAGGEALFVACDVTRDAEVKALVEQTIAAY   82 (253)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH--HhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            45689999999999999999999999999999999876655444422  2234568899999999988887765      


Q ss_pred             -cCCEEEecCCCCCCCC-------cchhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS-------TYDELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~-------~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                       ++|+|||+++......       +..+..+++|+.++.++++++.    +. +..++|++||..++......       
T Consensus        83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~~sS~~~~~~~~~~-------  154 (253)
T PRK06172         83 GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQ-GGGAIVNTASVAGLGAAPKM-------  154 (253)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEECchhhccCCCCC-------
Confidence             3599999998643211       1123678899999987776543    33 45789999997633211111       


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCcccccccc----ccC-CCc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAAE----MYE-DGV  237 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~~----~~~-~~~  237 (294)
                                      ..|+.+|.+.+.+.+.++.+.   ++++.+++||.+-.+....   ...+.+.    ... ...
T Consensus       155 ----------------~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~---~~~~~~~~~~~~~~~~~~  215 (253)
T PRK06172        155 ----------------SIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRR---AYEADPRKAEFAAAMHPV  215 (253)
T ss_pred             ----------------chhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhh---hcccChHHHHHHhccCCC
Confidence                            679999999999999988774   7999999999996664211   1111110    000 111


Q ss_pred             cccccHHHHHHHHHhhhcCc--CCCCeEEeec
Q 043792          238 MASVDLRFYVDAHICVFEDV--SSYGRYLCFN  267 (294)
Q Consensus       238 ~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~  267 (294)
                      ..+...+|+++.+++++...  ...|+++..+
T Consensus       216 ~~~~~p~~ia~~~~~l~~~~~~~~~G~~i~~d  247 (253)
T PRK06172        216 GRIGKVEEVASAVLYLCSDGASFTTGHALMVD  247 (253)
T ss_pred             CCccCHHHHHHHHHHHhCccccCcCCcEEEEC
Confidence            22678999999999998754  3366655433

>PRK06398 aldose dehydrogenase; Validated

Probab=99.88  E-value=2e-20  Score=156.77  Aligned_cols=206  Identities=13%  Similarity=0.035  Sum_probs=146.0

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++++||||||+|+||+++++.|+++|++|++++|+....             .++.++.+|++|++++.++++     
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-------------~~~~~~~~D~~~~~~i~~~~~~~~~~   69 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-------------NDVDYFKVDVSNKEQVIKGIDYVISK   69 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-------------CceEEEEccCCCHHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999875321             257899999999988877765     


Q ss_pred             --cCCEEEecCCCCCCCCc---c---hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHST---Y---DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~~---~---~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                        ++|+|||+|+.......   .   .+..+++|+.++.++++++.+.   .+..++|++||..+.......        
T Consensus        70 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  141 (258)
T PRK06398         70 YGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNA--------  141 (258)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCC--------
Confidence              57999999986432211   1   1267899999999998887543   245799999997533211111        


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc--CCeEEEEecCceeCCCCCCCCcccccc-c-------cccC--
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR--GISMVSINGGLVMGPDVTISNPYLKGA-A-------EMYE--  234 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ilrp~~i~G~~~~~~~~~~~~~-~-------~~~~--  234 (294)
                                     ..|+.+|.+.+.+.+.++.+.  .+++++++||.+..+..........+. +       ..+.  
T Consensus       142 ---------------~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (258)
T PRK06398        142 ---------------AAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEM  206 (258)
T ss_pred             ---------------chhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhc
Confidence                           679999999999999998775  499999999998766421110000000 0       0000  


Q ss_pred             CCccccccHHHHHHHHHhhhcCc--CCCCeEE
Q 043792          235 DGVMASVDLRFYVDAHICVFEDV--SSYGRYL  264 (294)
Q Consensus       235 ~~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~  264 (294)
                      .....+..++|+|++++.++...  ...|+.+
T Consensus       207 ~~~~~~~~p~eva~~~~~l~s~~~~~~~G~~i  238 (258)
T PRK06398        207 HPMKRVGKPEEVAYVVAFLASDLASFITGECV  238 (258)
T ss_pred             CCcCCCcCHHHHHHHHHHHcCcccCCCCCcEE
Confidence            01112678999999999988653  2355543

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.88  E-value=8.2e-21  Score=159.11  Aligned_cols=216  Identities=16%  Similarity=0.080  Sum_probs=152.3

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      ..+++|+||||+|+||+++++.|+++|++|++++|+.+..+.+..++  .....++.++.+|+++.+++.++++      
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEI--EAEGGAAHVVSLDVTDYQSIKAAVAHAETEA   84 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            45689999999999999999999999999999999876665554432  1223468899999999998888775      


Q ss_pred             -cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---CC--------CcEEEEecCcceeeeCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---NT--------VDKVVFTSSLTAVVWNNHRD  159 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~~--------~~~~v~~Ss~~~~~~~~~~~  159 (294)
                       .+|+|||+++......      ...+.++++|+.++.++++++...   ..        ..++|++||..+....... 
T Consensus        85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~-  163 (258)
T PRK06949         85 GTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQI-  163 (258)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCc-
Confidence             4799999998643221      112377899999999998876532   11        2589999997532111101 


Q ss_pred             CCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCcccccc-ccccCC
Q 043792          160 NPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGA-AEMYED  235 (294)
Q Consensus       160 ~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~-~~~~~~  235 (294)
                                            .+|+.+|.+.+.+++.++.+   .++++++++||.++++......  .... ......
T Consensus       164 ----------------------~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~  219 (258)
T PRK06949        164 ----------------------GLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHW--ETEQGQKLVSM  219 (258)
T ss_pred             ----------------------cHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhcc--ChHHHHHHHhc
Confidence                                  67999999999999988766   4899999999999988632111  0100 011111


Q ss_pred             -CccccccHHHHHHHHHhhhcCcC--CCCeEEee
Q 043792          236 -GVMASVDLRFYVDAHICVFEDVS--SYGRYLCF  266 (294)
Q Consensus       236 -~~~~~v~v~D~a~~i~~~~~~~~--~~~~~~~~  266 (294)
                       ....+...+|+++++.+++....  .+|+.+..
T Consensus       220 ~~~~~~~~p~~~~~~~~~l~~~~~~~~~G~~i~~  253 (258)
T PRK06949        220 LPRKRVGKPEDLDGLLLLLAADESQFINGAIISA  253 (258)
T ss_pred             CCCCCCcCHHHHHHHHHHHhChhhcCCCCcEEEe
Confidence             11126678999999999987432  35665543

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1e-20  Score=157.98  Aligned_cols=217  Identities=14%  Similarity=0.034  Sum_probs=150.9

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++++++||||+|+||+++++.|+++|++|++++|+.+.     .   .  ...++.++.+|+.+++++.++++     
T Consensus         3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~-----~---~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~   72 (252)
T PRK07856          3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-----T---V--DGRPAEFHAADVRDPDQVAALVDAIVER   72 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh-----h---h--cCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999997643     1   1  12368899999999998887775     


Q ss_pred             --cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc----CCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT----NTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                        ++|+||||++......      ...++.+++|+.++.++++++...    .+..++|++||..+.......       
T Consensus        73 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~-------  145 (252)
T PRK07856         73 HGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGT-------  145 (252)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCC-------
Confidence              3599999998643211      112378899999999999987642    134689999997532211111       


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc--CCeEEEEecCceeCCCCCCCCccccccc---cccC-CCccc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR--GISMVSINGGLVMGPDVTISNPYLKGAA---EMYE-DGVMA  239 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ilrp~~i~G~~~~~~~~~~~~~~---~~~~-~~~~~  239 (294)
                                      ..|+.+|.+.+.+++.++.+.  .+++.+++||.+..+....   ......   .... .....
T Consensus       146 ----------------~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~---~~~~~~~~~~~~~~~~~~~  206 (252)
T PRK07856        146 ----------------AAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSEL---HYGDAEGIAAVAATVPLGR  206 (252)
T ss_pred             ----------------chhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhh---hccCHHHHHHHhhcCCCCC
Confidence                            679999999999999988764  3899999999997765211   000000   0000 01112


Q ss_pred             cccHHHHHHHHHhhhcCc--CCCCeEEeecccccHHHH
Q 043792          240 SVDLRFYVDAHICVFEDV--SSYGRYLCFNHVINCNED  275 (294)
Q Consensus       240 ~v~v~D~a~~i~~~~~~~--~~~~~~~~~~~~~s~~~~  275 (294)
                      +..++|+|++++.++...  ..+|+.+..++......+
T Consensus       207 ~~~p~~va~~~~~L~~~~~~~i~G~~i~vdgg~~~~~~  244 (252)
T PRK07856        207 LATPADIAWACLFLASDLASYVSGANLEVHGGGERPAF  244 (252)
T ss_pred             CcCHHHHHHHHHHHcCcccCCccCCEEEECCCcchHHH
Confidence            678999999999988653  235665444433333333

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.1e-20  Score=158.89  Aligned_cols=221  Identities=16%  Similarity=0.054  Sum_probs=149.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++++||||+|+||+++++.|+++|++|++++|+....+....   ......++.++.+|+++++++.++++      
T Consensus         4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~---~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   80 (263)
T PRK08226          4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADE---LCGRGHRCTAVVADVRDPASVAAAIKRAKEKE   80 (263)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHH---HHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            346899999999999999999999999999999987642222222   21223467889999999998887765      


Q ss_pred             -cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                       .+|+|||+++.......      ..++.+++|+.++.++++++.+.   .+..++|++||..+...+...    .    
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~----~----  152 (263)
T PRK08226         81 GRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPG----E----  152 (263)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCC----c----
Confidence             46999999986432211      11267899999999999987642   245689999986431111111    1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCcccc-ccc-----cccCC-Cc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLK-GAA-----EMYED-GV  237 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~-~~~-----~~~~~-~~  237 (294)
                                    ..|+.+|.+.+.+++.++.+.   +++++.++||.+.++.......... ...     ..... ..
T Consensus       153 --------------~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~  218 (263)
T PRK08226        153 --------------TAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPL  218 (263)
T ss_pred             --------------chHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCC
Confidence                          679999999999999988764   7999999999998875221000000 000     00000 11


Q ss_pred             cccccHHHHHHHHHhhhcCc--CCCCeEEeeccc
Q 043792          238 MASVDLRFYVDAHICVFEDV--SSYGRYLCFNHV  269 (294)
Q Consensus       238 ~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~~~  269 (294)
                      ..+...+|+|++++.++...  ..+|+.+..++.
T Consensus       219 ~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~dgg  252 (263)
T PRK08226        219 RRLADPLEVGELAAFLASDESSYLTGTQNVIDGG  252 (263)
T ss_pred             CCCCCHHHHHHHHHHHcCchhcCCcCceEeECCC
Confidence            12678999999998887543  335665444433

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.87  E-value=6.5e-21  Score=158.64  Aligned_cols=206  Identities=15%  Similarity=0.063  Sum_probs=140.5

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEE-ecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc------
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAA-LHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG------   98 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~------   98 (294)
                      |++|+||||+|+||+++++.|+++|++|+++ .|+.++......+  ....+.++.++.+|+.|.+++.+++++      
T Consensus         1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~   78 (247)
T PRK09730          1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNL--ITQAGGKAFVLQADISDENQVVAMFTAIDQHDE   78 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHH--HHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            4689999999999999999999999999875 4555443333332  112234688899999999988887763      


Q ss_pred             -CCEEEecCCCCCCCCc-------chhhhHhHhhHHHHHHHHHHHhc------CCCcEEEEecCcceeeeCCCCCCCCCC
Q 043792           99 -CSGLFYSFEPPSDHST-------YDELTAEVETMAAHNVLEACAQT------NTVDKVVFTSSLTAVVWNNHRDNPTSH  164 (294)
Q Consensus        99 -~d~Vih~a~~~~~~~~-------~~~~~~~~n~~~~~~ll~~~~~~------~~~~~~v~~Ss~~~~~~~~~~~~~~~~  164 (294)
                       +|+|||+++.......       ..+..+++|+.++.++++++...      ++.++||++||..++. +...    ..
T Consensus        79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~-~~~~----~~  153 (247)
T PRK09730         79 PLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRL-GAPG----EY  153 (247)
T ss_pred             CCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcc-CCCC----cc
Confidence             5899999986432111       11277899999998887765543      1235799999975322 2111    00


Q ss_pred             CCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc--cccccccccCCCccc
Q 043792          165 DFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP--YLKGAAEMYEDGVMA  239 (294)
Q Consensus       165 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~--~~~~~~~~~~~~~~~  239 (294)
                                       ..|+.+|...+.+++.++.+   .+++++++||+.+|++.......  .........+  ...
T Consensus       154 -----------------~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~--~~~  214 (247)
T PRK09730        154 -----------------VDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIP--MQR  214 (247)
T ss_pred             -----------------cchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCC--CCC
Confidence                             45999999999998887755   48999999999999986322110  0000000001  111


Q ss_pred             cccHHHHHHHHHhhhcCc
Q 043792          240 SVDLRFYVDAHICVFEDV  257 (294)
Q Consensus       240 ~v~v~D~a~~i~~~~~~~  257 (294)
                      +.+++|+|++++.++...
T Consensus       215 ~~~~~dva~~~~~~~~~~  232 (247)
T PRK09730        215 GGQPEEVAQAIVWLLSDK  232 (247)
T ss_pred             CcCHHHHHHHHHhhcChh
Confidence            457899999999988654

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.87  E-value=1.2e-20  Score=156.75  Aligned_cols=216  Identities=16%  Similarity=0.078  Sum_probs=148.3

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++++++||||+|+||+++++.|+++|+.|.+..|+.++.+.+...     ...++.++.+|+++.+++.++++     
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAE-----LGERVKIFPANLSDRDEVKALGQKAEAD   77 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH-----hCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            34568999999999999999999999999998888876555544331     12468889999999998877754     


Q ss_pred             --cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                        ++|+||||++......      ...+..+++|+.++.++++++.+.   .+.++||++||..+. ++...    .   
T Consensus        78 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-~~~~~----~---  149 (245)
T PRK12936         78 LEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGV-TGNPG----Q---  149 (245)
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhC-cCCCC----C---
Confidence              4799999998743211      112377899999999988876532   255789999997532 22211    1   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccC-CCcccccc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYE-DGVMASVD  242 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~-~~~~~~v~  242 (294)
                                     ..|+.+|.+.+.+++.++.+   .++++++++|+.+..+..........  ..... .....+..
T Consensus       150 ---------------~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~--~~~~~~~~~~~~~~  212 (245)
T PRK12936        150 ---------------ANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDKQK--EAIMGAIPMKRMGT  212 (245)
T ss_pred             ---------------cchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChHHH--HHHhcCCCCCCCcC
Confidence                           67999999998888877655   47999999999886554211110000  00001 11122677


Q ss_pred             HHHHHHHHHhhhcCcC--CCCe-EEeecc
Q 043792          243 LRFYVDAHICVFEDVS--SYGR-YLCFNH  268 (294)
Q Consensus       243 v~D~a~~i~~~~~~~~--~~~~-~~~~~~  268 (294)
                      .+|+++++.+++....  ..|+ +.+.++
T Consensus       213 ~~~ia~~~~~l~~~~~~~~~G~~~~~~~g  241 (245)
T PRK12936        213 GAEVASAVAYLASSEAAYVTGQTIHVNGG  241 (245)
T ss_pred             HHHHHHHHHHHcCccccCcCCCEEEECCC
Confidence            9999999988875432  2455 444443

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.87  E-value=2e-20  Score=156.21  Aligned_cols=211  Identities=13%  Similarity=0.045  Sum_probs=144.2

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEec-CCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALH-NHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      ++++++||||+|+||+++++.|+++|++|.+..+ +.+..+.+..+  .......+..+.+|+.+.+++..+++      
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYE--IQSNGGSAFSIGANLESLHGVEALYSSLDNEL   80 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH--HHhcCCceEEEecccCCHHHHHHHHHHHHHHh
Confidence            3589999999999999999999999999988754 43333333332  22223457788999999876654332      


Q ss_pred             -------cCCEEEecCCCCCCCCc---c---hhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCC
Q 043792           98 -------GCSGLFYSFEPPSDHST---Y---DELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTS  163 (294)
Q Consensus        98 -------~~d~Vih~a~~~~~~~~---~---~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~  163 (294)
                             ++|++||||+.......   .   .+.++++|+.++..+++++.+. ....++|++||..+......     .
T Consensus        81 ~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~-----~  155 (252)
T PRK12747         81 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPD-----F  155 (252)
T ss_pred             hhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCCC-----c
Confidence                   58999999986432111   1   1377889999999999887664 12358999999863221111     1


Q ss_pred             CCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccc--ccc--CCC
Q 043792          164 HDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAA--EMY--EDG  236 (294)
Q Consensus       164 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~--~~~--~~~  236 (294)
                                        ..|+.+|.+.+.+.+.++.+.   ++++++++||.|.++....   ......  ...  ...
T Consensus       156 ------------------~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~---~~~~~~~~~~~~~~~~  214 (252)
T PRK12747        156 ------------------IAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAE---LLSDPMMKQYATTISA  214 (252)
T ss_pred             ------------------hhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhh---cccCHHHHHHHHhcCc
Confidence                              679999999999999987764   8999999999998875321   111100  000  001


Q ss_pred             ccccccHHHHHHHHHhhhcCcC--CCCeE
Q 043792          237 VMASVDLRFYVDAHICVFEDVS--SYGRY  263 (294)
Q Consensus       237 ~~~~v~v~D~a~~i~~~~~~~~--~~~~~  263 (294)
                      ...+.+++|+|++++.++....  ..|+.
T Consensus       215 ~~~~~~~~dva~~~~~l~s~~~~~~~G~~  243 (252)
T PRK12747        215 FNRLGEVEDIADTAAFLASPDSRWVTGQL  243 (252)
T ss_pred             ccCCCCHHHHHHHHHHHcCccccCcCCcE
Confidence            1237899999999999886432  34553

>PRK08017 oxidoreductase; Provisional

Probab=99.87  E-value=9.8e-21  Score=158.46  Aligned_cols=199  Identities=19%  Similarity=0.108  Sum_probs=140.5

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--------
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--------   97 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--------   97 (294)
                      +++|+||||+|+||+++++.|+++|++|++++|+.++.+.+..        .++..+.+|+.|.+++.++++        
T Consensus         2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~--------~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   73 (256)
T PRK08017          2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS--------LGFTGILLDLDDPESVERAADEVIALTDN   73 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh--------CCCeEEEeecCCHHHHHHHHHHHHHhcCC
Confidence            3689999999999999999999999999999998765544433        257889999999988766553        


Q ss_pred             cCCEEEecCCCCCCCC----c--chhhhHhHhhHHHHHH----HHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 GCSGLFYSFEPPSDHS----T--YDELTAEVETMAAHNV----LEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~l----l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                      .+|.+||+++......    .  ..++.++.|+.++.++    ++++.+. +.+++|++||..+..... .    .    
T Consensus        74 ~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~iv~~ss~~~~~~~~-~----~----  143 (256)
T PRK08017         74 RLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPH-GEGRIVMTSSVMGLISTP-G----R----  143 (256)
T ss_pred             CCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCCEEEEEcCcccccCCC-C----c----
Confidence            3589999988643211    1  1237889999988776    4555555 667999999964322111 1    1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHH---hcCCeEEEEecCceeCCCCCCCCcccccc--ccccCCCc--ccc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAM---DRGISMVSINGGLVMGPDVTISNPYLKGA--AEMYEDGV--MAS  240 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~---~~~~~~~ilrp~~i~G~~~~~~~~~~~~~--~~~~~~~~--~~~  240 (294)
                                    +.|+.+|...|.+.+.++.   ..+++++++|||.+..+....   ...+.  ......+.  ..+
T Consensus       144 --------------~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~---~~~~~~~~~~~~~~~~~~~~  206 (256)
T PRK08017        144 --------------GAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDN---VNQTQSDKPVENPGIAARFT  206 (256)
T ss_pred             --------------cHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhc---ccchhhccchhhhHHHhhcC
Confidence                          6799999999998776543   458999999999886543211   11111  11111111  237


Q ss_pred             ccHHHHHHHHHhhhcCcCC
Q 043792          241 VDLRFYVDAHICVFEDVSS  259 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~~~  259 (294)
                      ++++|+++++..++.++..
T Consensus       207 ~~~~d~a~~~~~~~~~~~~  225 (256)
T PRK08017        207 LGPEAVVPKLRHALESPKP  225 (256)
T ss_pred             CCHHHHHHHHHHHHhCCCC
Confidence            9999999999999977654

>PRK08589 short chain dehydrogenase; Validated

Probab=99.87  E-value=2.7e-20  Score=157.22  Aligned_cols=215  Identities=14%  Similarity=0.034  Sum_probs=148.5

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .+++++|||||+|+||+++++.|+++|++|++++|+ +..+.+.++  +.....++.++.+|+++++++..+++      
T Consensus         4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~--~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   80 (272)
T PRK08589          4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDK--IKSNGGKAKAYHVDISDEQQVKDFASEIKEQF   80 (272)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHH--HHhcCCeEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            457899999999999999999999999999999998 544444432  22223468899999999988877765      


Q ss_pred             -cCCEEEecCCCCCCC---Cc-c---hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDH---ST-Y---DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~---~~-~---~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                       .+|++||||+.....   .. .   .++.+++|+.++..+++++...   .+ .++|++||..+.......        
T Consensus        81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~--------  151 (272)
T PRK08589         81 GRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYR--------  151 (272)
T ss_pred             CCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCC--------
Confidence             479999999875321   11 1   1377889999998887776543   24 689999997532211111        


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCcccc---ccc--cc--cCCC
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLK---GAA--EM--YEDG  236 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~---~~~--~~--~~~~  236 (294)
                                     ..|+.+|.+.+.+++.++.+.   |+++++++||.|..+..........   +..  ..  ....
T Consensus       152 ---------------~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (272)
T PRK08589        152 ---------------SGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTP  216 (272)
T ss_pred             ---------------chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCC
Confidence                           679999999999999988764   7999999999997664211000000   000  00  0011


Q ss_pred             ccccccHHHHHHHHHhhhcCc--CCCCeEEe
Q 043792          237 VMASVDLRFYVDAHICVFEDV--SSYGRYLC  265 (294)
Q Consensus       237 ~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~  265 (294)
                      ...+..++|+|++++.++...  ..+|+.+.
T Consensus       217 ~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~  247 (272)
T PRK08589        217 LGRLGKPEEVAKLVVFLASDDSSFITGETIR  247 (272)
T ss_pred             CCCCcCHHHHHHHHHHHcCchhcCcCCCEEE
Confidence            112678999999999988643  33565443

>PRK12742 oxidoreductase; Provisional

Probab=99.87  E-value=2.3e-20  Score=154.41  Aligned_cols=212  Identities=14%  Similarity=0.096  Sum_probs=144.6

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecC-CCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc---c
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHN-HGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK---G   98 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---~   98 (294)
                      ..++++||||||+|+||+++++.|+++|++|+++.++ .+..+.+..+       .++.++.+|++|.+++.++++   .
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~-------~~~~~~~~D~~~~~~~~~~~~~~~~   75 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQE-------TGATAVQTDSADRDAVIDVVRKSGA   75 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH-------hCCeEEecCCCCHHHHHHHHHHhCC
Confidence            3456899999999999999999999999999887664 3333333331       145778899999988877765   3


Q ss_pred             CCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCC
Q 043792           99 CSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNW  171 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~  171 (294)
                      +|++||+++......      ...+..+++|+.++.++++.+.+. ....++|++||..+...+          .     
T Consensus        76 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~----------~-----  140 (237)
T PRK12742         76 LDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMP----------V-----  140 (237)
T ss_pred             CcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccCC----------C-----
Confidence            799999998643221      112378999999999998776654 233689999996421100          0     


Q ss_pred             CChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHHHHH
Q 043792          172 SDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVD  248 (294)
Q Consensus       172 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~  248 (294)
                       .+.      ..|+.+|.+.+.+++.++.+   .++++++++||.+..+.........+......+  ...+...+|+++
T Consensus       141 -~~~------~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~--~~~~~~p~~~a~  211 (237)
T PRK12742        141 -AGM------AAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGPMKDMMHSFMA--IKRHGRPEEVAG  211 (237)
T ss_pred             -CCC------cchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccHHHHHHHhcCC--CCCCCCHHHHHH
Confidence             001      67999999999999988765   479999999999976652211100000000111  112678999999


Q ss_pred             HHHhhhcCcC--CCCeEEe
Q 043792          249 AHICVFEDVS--SYGRYLC  265 (294)
Q Consensus       249 ~i~~~~~~~~--~~~~~~~  265 (294)
                      ++..++....  .+|..+.
T Consensus       212 ~~~~l~s~~~~~~~G~~~~  230 (237)
T PRK12742        212 MVAWLAGPEASFVTGAMHT  230 (237)
T ss_pred             HHHHHcCcccCcccCCEEE
Confidence            9999886532  3555443

>PRK08264 short chain dehydrogenase; Validated

Probab=99.87  E-value=1.2e-20  Score=156.16  Aligned_cols=189  Identities=19%  Similarity=0.066  Sum_probs=142.0

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc---c
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK---G   98 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---~   98 (294)
                      ...+++|+||||+|+||+++++.|+++|+ +|++++|+.++.+.         ...++.++.+|+.|.+++.++++   .
T Consensus         3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (238)
T PRK08264          3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---------LGPRVVPLQLDVTDPASVAAAAEAASD   73 (238)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---------cCCceEEEEecCCCHHHHHHHHHhcCC
Confidence            34568999999999999999999999998 99999998654322         12478899999999999888876   4


Q ss_pred             CCEEEecCCCCCCC-----C--cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           99 CSGLFYSFEPPSDH-----S--TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        99 ~d~Vih~a~~~~~~-----~--~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                      +|+|||+++.....     .  ......+++|+.++.++++++.+.   .+.++||++||..++. +...    .     
T Consensus        74 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~-~~~~----~-----  143 (238)
T PRK08264         74 VTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWV-NFPN----L-----  143 (238)
T ss_pred             CCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcc-CCCC----c-----
Confidence            79999999872211     1  112367889999999999986532   2567899999975321 1111    1     


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHH
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRF  245 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  245 (294)
                                   ..|+.+|.+.+.+.+.++.+.   +++++++||+.+.++..   .    +.       ....+..+|
T Consensus       144 -------------~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~---~----~~-------~~~~~~~~~  196 (238)
T PRK08264        144 -------------GTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMA---A----GL-------DAPKASPAD  196 (238)
T ss_pred             -------------hHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCccccccc---c----cC-------CcCCCCHHH
Confidence                         679999999999999887663   89999999999976541   1    00       011577899


Q ss_pred             HHHHHHhhhcCc
Q 043792          246 YVDAHICVFEDV  257 (294)
Q Consensus       246 ~a~~i~~~~~~~  257 (294)
                      +++.++..+..+
T Consensus       197 ~a~~~~~~~~~~  208 (238)
T PRK08264        197 VARQILDALEAG  208 (238)
T ss_pred             HHHHHHHHHhCC
Confidence            999998888753

>PRK06196 oxidoreductase; Provisional

Probab=99.87  E-value=5.6e-20  Score=158.52  Aligned_cols=216  Identities=15%  Similarity=-0.008  Sum_probs=144.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++|+||||+|+||++++++|+++|++|++++|+.++.+.+..++      .++.++.+|++|.+++.++++      
T Consensus        24 l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l------~~v~~~~~Dl~d~~~v~~~~~~~~~~~   97 (315)
T PRK06196         24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGI------DGVEVVMLDLADLESVRAFAERFLDSG   97 (315)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------hhCeEEEccCCCHHHHHHHHHHHHhcC
Confidence            35689999999999999999999999999999999876555443321      247899999999998877764      


Q ss_pred             -cCCEEEecCCCCCCCC----cchhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS----TYDELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~----~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                       ++|+||||||......    ...+..+++|+.++.++++++.    +. +..++|++||.+... +...    ......
T Consensus        98 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~vSS~~~~~-~~~~----~~~~~~  171 (315)
T PRK06196         98 RRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAG-AGARVVALSSAGHRR-SPIR----WDDPHF  171 (315)
T ss_pred             CCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCeEEEECCHHhcc-CCCC----ccccCc
Confidence             5799999998643211    1124778999999777766544    34 446999999975322 1111    000000


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCC-C-cc--ccc
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYED-G-VM--ASV  241 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~-~-~~--~~v  241 (294)
                      ..+..+.      ..|+.||.+.+.+.+.++.+   .|+++++++||.+.++.................. . ..  .+.
T Consensus       172 ~~~~~~~------~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (315)
T PRK06196        172 TRGYDKW------LAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFK  245 (315)
T ss_pred             cCCCChH------HHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcC
Confidence            1111112      67999999999998888765   4799999999999988632111000000000000 0 00  256


Q ss_pred             cHHHHHHHHHhhhcCc
Q 043792          242 DLRFYVDAHICVFEDV  257 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~  257 (294)
                      .++|+|..++.++..+
T Consensus       246 ~~~~~a~~~~~l~~~~  261 (315)
T PRK06196        246 TPAQGAATQVWAATSP  261 (315)
T ss_pred             CHhHHHHHHHHHhcCC
Confidence            7899999999888654

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.87  E-value=2.7e-20  Score=155.70  Aligned_cols=218  Identities=16%  Similarity=0.086  Sum_probs=149.9

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC-hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK-LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      ..++++++||||+|+||+++++.|+++|++|++++|+.+. .+.+.++  +.....++.++.+|++|++++.++++    
T Consensus         5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~--l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   82 (254)
T PRK06114          5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEH--IEAAGRRAIQIAADVTSKADLRAAVARTEA   82 (254)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHH--HHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999987643 2333332  22223468889999999988877765    


Q ss_pred             ---cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                         ++|+||||++......      ...+..+++|+.++..+++++...   .+.+++|++||.+........       
T Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-------  155 (254)
T PRK06114         83 ELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGL-------  155 (254)
T ss_pred             HcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCC-------
Confidence               3699999998754321      112377899999998887775432   245689999997532211100       


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccc---cccCCCccc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAA---EMYEDGVMA  239 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~---~~~~~~~~~  239 (294)
                              ..      ..|+.+|.+.+.+.+.++.+   .|+++.+++||.+.++...... ..+...   ...+.+  .
T Consensus       156 --------~~------~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~-~~~~~~~~~~~~p~~--r  218 (254)
T PRK06114        156 --------LQ------AHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPE-MVHQTKLFEEQTPMQ--R  218 (254)
T ss_pred             --------Cc------chHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCccccccc-chHHHHHHHhcCCCC--C
Confidence                    00      57999999999999988765   4899999999999877532111 110000   111111  2


Q ss_pred             cccHHHHHHHHHhhhcCc--CCCCeEEee
Q 043792          240 SVDLRFYVDAHICVFEDV--SSYGRYLCF  266 (294)
Q Consensus       240 ~v~v~D~a~~i~~~~~~~--~~~~~~~~~  266 (294)
                      +..++|+|.+++.++...  ..+|+.+..
T Consensus       219 ~~~~~dva~~~~~l~s~~~~~~tG~~i~~  247 (254)
T PRK06114        219 MAKVDEMVGPAVFLLSDAASFCTGVDLLV  247 (254)
T ss_pred             CcCHHHHHHHHHHHcCccccCcCCceEEE
Confidence            678899999999988643  335554433

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.87  E-value=3.1e-20  Score=154.41  Aligned_cols=215  Identities=16%  Similarity=0.043  Sum_probs=147.3

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC-hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK-LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      .++++|+||||+|+||+++++.|+++|++|+++.|+... .+.+.++  ......++.++.+|+++.+++.++++     
T Consensus         3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (245)
T PRK12937          3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAE--IEAAGGRAIAVQADVADAAAVTRLFDAAETA   80 (245)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH--HHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            356899999999999999999999999999888775432 2333332  12234578899999999998888776     


Q ss_pred             --cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                        ++|+|||+++......      ...+..+++|+.++.++++++.+. ...+++|++||.+... +...    .     
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~-~~~~----~-----  150 (245)
T PRK12937         81 FGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIAL-PLPG----Y-----  150 (245)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccC-CCCC----C-----
Confidence              5799999998643211      112377889999999999888654 1225899999865211 1111    1     


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccccccCC-CccccccHH
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAAEMYED-GVMASVDLR  244 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~-~~~~~v~v~  244 (294)
                                   ..|+.+|.+.+.+++.++.+.   ++++++++||.+.++........ ......... ....+.+++
T Consensus       151 -------------~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  216 (245)
T PRK12937        151 -------------GPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSA-EQIDQLAGLAPLERLGTPE  216 (245)
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCH-HHHHHHHhcCCCCCCCCHH
Confidence                         679999999999999887663   79999999998866541111000 000001111 112267899


Q ss_pred             HHHHHHHhhhcCcC--CCCeEE
Q 043792          245 FYVDAHICVFEDVS--SYGRYL  264 (294)
Q Consensus       245 D~a~~i~~~~~~~~--~~~~~~  264 (294)
                      |++++++.++....  ..|+++
T Consensus       217 d~a~~~~~l~~~~~~~~~g~~~  238 (245)
T PRK12937        217 EIAAAVAFLAGPDGAWVNGQVL  238 (245)
T ss_pred             HHHHHHHHHcCccccCccccEE
Confidence            99999999886543  245543

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.87  E-value=3e-20  Score=155.18  Aligned_cols=196  Identities=15%  Similarity=0.117  Sum_probs=140.2

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCC-hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGK-LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~-~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++|+||||+|+||++++++|+++| ++|++++|++++ .+.+.+++.. ....++.++.+|+.|.+++.++++     
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~-~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   85 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKA-AGASSVEVIDFDALDTDSHPKVIDAAFAG   85 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHh-cCCCceEEEEecCCChHHHHHHHHHHHhc
Confidence            35789999999999999999999995 999999998875 5554443211 122368899999999887665553     


Q ss_pred             -cCCEEEecCCCCCCCCc---ch---hhhHhHhhHHHHH----HHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHST---YD---ELTAEVETMAAHN----VLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~---~~---~~~~~~n~~~~~~----ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                       ++|++||+++.......   ..   .+.+++|+.++.+    +++.+.+. +..+||++||..+.. +...    .   
T Consensus        86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~-~~~~iv~isS~~g~~-~~~~----~---  156 (253)
T PRK07904         86 GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQ-GFGQIIAMSSVAGER-VRRS----N---  156 (253)
T ss_pred             CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhc-CCceEEEEechhhcC-CCCC----C---
Confidence             58999999887533211   11   1468999998876    45556555 668999999975311 1100    1   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccH
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDL  243 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v  243 (294)
                                     ..|+.||.+...+.+.++.+   +++++++++||.+..+..   .    ....     ....+..
T Consensus       157 ---------------~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~---~----~~~~-----~~~~~~~  209 (253)
T PRK07904        157 ---------------FVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMS---A----HAKE-----APLTVDK  209 (253)
T ss_pred             ---------------cchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchh---c----cCCC-----CCCCCCH
Confidence                           56999999998777766543   589999999999986542   1    0000     0125789


Q ss_pred             HHHHHHHHhhhcCc
Q 043792          244 RFYVDAHICVFEDV  257 (294)
Q Consensus       244 ~D~a~~i~~~~~~~  257 (294)
                      +|+|+.++.++.++
T Consensus       210 ~~~A~~i~~~~~~~  223 (253)
T PRK07904        210 EDVAKLAVTAVAKG  223 (253)
T ss_pred             HHHHHHHHHHHHcC
Confidence            99999999999765

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.87  E-value=2e-20  Score=157.31  Aligned_cols=202  Identities=16%  Similarity=0.015  Sum_probs=146.9

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------c
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------G   98 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------~   98 (294)
                      ++++|+||||+|+||+++++.|+++|++|++++|+.++.+.+..++   ....++.++.+|+.|.+++.++++      .
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~   80 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL---PYPGRHRWVVADLTSEAGREAVLARAREMGG   80 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH---hcCCceEEEEccCCCHHHHHHHHHHHHhcCC
Confidence            4689999999999999999999999999999999876655554422   224578899999999988877654      4


Q ss_pred             CCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCCCC
Q 043792           99 CSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDER  169 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~  169 (294)
                      +|+|||+++......      ....+.+++|+.++.++++++.+.   .+..++|++||..+.. +...    .      
T Consensus        81 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-~~~~----~------  149 (263)
T PRK09072         81 INVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSI-GYPG----Y------  149 (263)
T ss_pred             CCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCc-CCCC----c------
Confidence            799999998754221      112377889999999999987653   2346899998875321 2111    1      


Q ss_pred             CCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHHH
Q 043792          170 NWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFY  246 (294)
Q Consensus       170 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~  246 (294)
                                  ..|+.+|.+.+.+++.++.+   .+++++++.||.+.++....   ...   .........+..++|+
T Consensus       150 ------------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~---~~~---~~~~~~~~~~~~~~~v  211 (263)
T PRK09072        150 ------------ASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSE---AVQ---ALNRALGNAMDDPEDV  211 (263)
T ss_pred             ------------cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhh---hcc---cccccccCCCCCHHHH
Confidence                        67999999999988888865   37999999999886554211   100   0000111236789999


Q ss_pred             HHHHHhhhcCcC
Q 043792          247 VDAHICVFEDVS  258 (294)
Q Consensus       247 a~~i~~~~~~~~  258 (294)
                      |++++.+++++.
T Consensus       212 a~~i~~~~~~~~  223 (263)
T PRK09072        212 AAAVLQAIEKER  223 (263)
T ss_pred             HHHHHHHHhCCC
Confidence            999999998753

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.87  E-value=3.3e-20  Score=153.76  Aligned_cols=201  Identities=12%  Similarity=0.022  Sum_probs=142.0

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCC--hhHHHHHh----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFD--YHSLVNAL----   96 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~--~~~~~~~~----   96 (294)
                      ..++++|+||||+|+||+++++.|+++|++|++++|+.+..+.+..++.. .....+.++.+|+.+  .+++.+++    
T Consensus         3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~i~   81 (239)
T PRK08703          3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVE-AGHPEPFAIRFDLMSAEEKEFEQFAATIA   81 (239)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHH-cCCCCcceEEeeecccchHHHHHHHHHHH
Confidence            44568999999999999999999999999999999988766555443211 122356778899875  33444332    


Q ss_pred             ----ccCCEEEecCCCCCCC---C-c---chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCC
Q 043792           97 ----KGCSGLFYSFEPPSDH---S-T---YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPT  162 (294)
Q Consensus        97 ----~~~d~Vih~a~~~~~~---~-~---~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~  162 (294)
                          ..+|+|||+|+.....   . .   .....+++|+.++.++++++.+.   .+..++|++||..+.......    
T Consensus        82 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~----  157 (239)
T PRK08703         82 EATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYW----  157 (239)
T ss_pred             HHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCc----
Confidence                3579999999864221   1 1   11257899999999998887543   244689999986422111100    


Q ss_pred             CCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc----CCeEEEEecCceeCCCCCCCCccccccccccCCCcc
Q 043792          163 SHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR----GISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVM  238 (294)
Q Consensus       163 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~  238 (294)
                                         ..|+.+|.+.+.+++.++.+.    ++++++++||.|+++....   ...+.      ...
T Consensus       158 -------------------~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~---~~~~~------~~~  209 (239)
T PRK08703        158 -------------------GGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIK---SHPGE------AKS  209 (239)
T ss_pred             -------------------cchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccc---cCCCC------Ccc
Confidence                               579999999999999988774    5999999999999886221   11111      111


Q ss_pred             ccccHHHHHHHHHhhhcC
Q 043792          239 ASVDLRFYVDAHICVFED  256 (294)
Q Consensus       239 ~~v~v~D~a~~i~~~~~~  256 (294)
                      .+...+|++..++.++..
T Consensus       210 ~~~~~~~~~~~~~~~~~~  227 (239)
T PRK08703        210 ERKSYGDVLPAFVWWASA  227 (239)
T ss_pred             ccCCHHHHHHHHHHHhCc
Confidence            256889999999999873

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.87  E-value=3.5e-20  Score=157.09  Aligned_cols=217  Identities=15%  Similarity=0.109  Sum_probs=150.6

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      ..+++++||||+|+||+++++.|+++|++|++++|+.+..+.+.+++  .....++.++.+|+.|.+++..+++      
T Consensus         8 ~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   85 (278)
T PRK08277          8 LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEI--KAAGGEALAVKADVLDKESLEQARQQILEDF   85 (278)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            35689999999999999999999999999999999876555554432  1223468889999999988877664      


Q ss_pred             -cCCEEEecCCCCCCCC---------------------cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCccee
Q 043792           98 -GCSGLFYSFEPPSDHS---------------------TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAV  152 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~---------------------~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~  152 (294)
                       ++|++||+++......                     ......+++|+.++..+++++.+.   .+..++|++||..++
T Consensus        86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~  165 (278)
T PRK08277         86 GPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAF  165 (278)
T ss_pred             CCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhc
Confidence             5799999998543211                     112377889999988776655432   145789999997632


Q ss_pred             eeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccc-
Q 043792          153 VWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKG-  228 (294)
Q Consensus       153 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~-  228 (294)
                      ......                       ..|+.+|.+.+.+++.++.+.   ++++.+++||.+.++.....  ...+ 
T Consensus       166 ~~~~~~-----------------------~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~--~~~~~  220 (278)
T PRK08277        166 TPLTKV-----------------------PAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRAL--LFNED  220 (278)
T ss_pred             CCCCCC-----------------------chhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhh--hcccc
Confidence            211111                       679999999999999988775   79999999999988752210  1010 


Q ss_pred             -cc-----cccCC-CccccccHHHHHHHHHhhhcC-cC--CCCeEEeec
Q 043792          229 -AA-----EMYED-GVMASVDLRFYVDAHICVFED-VS--SYGRYLCFN  267 (294)
Q Consensus       229 -~~-----~~~~~-~~~~~v~v~D~a~~i~~~~~~-~~--~~~~~~~~~  267 (294)
                       ..     ..... ....+...+|+|++++.++.. ..  .+|+.+..+
T Consensus       221 ~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vd  269 (278)
T PRK08277        221 GSLTERANKILAHTPMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVD  269 (278)
T ss_pred             ccchhHHHHHhccCCccCCCCHHHHHHHHHHHcCccccCCcCCCEEEEC
Confidence             00     01011 111277899999999998875 32  356554433

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.87  E-value=2.1e-20  Score=155.73  Aligned_cols=215  Identities=12%  Similarity=0.056  Sum_probs=143.9

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEec-CCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALH-NHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------   97 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------   97 (294)
                      +++|+||||+|+||+.+++.|+++|++|+++.+ +++..+.+..+  ......++.++.+|++|.+++.++++       
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADA--VRAAGGRACVVAGDVANEADVIAMFDAVQSAFG   79 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH--HHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            579999999999999999999999999987654 43333333332  11223468899999999988877664       


Q ss_pred             cCCEEEecCCCCCCCC-----c--chhhhHhHhhHHHHHHHHHHHhc---CC---CcEEEEecCcceeeeCCCCCCCCCC
Q 043792           98 GCSGLFYSFEPPSDHS-----T--YDELTAEVETMAAHNVLEACAQT---NT---VDKVVFTSSLTAVVWNNHRDNPTSH  164 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~-----~--~~~~~~~~n~~~~~~ll~~~~~~---~~---~~~~v~~Ss~~~~~~~~~~~~~~~~  164 (294)
                      .+|+|||+++......     .  .....+++|+.++.++++++.+.   .+   -.+||++||.++. ++...    ..
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~-~~~~~----~~  154 (248)
T PRK06947         80 RLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASR-LGSPN----EY  154 (248)
T ss_pred             CCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhc-CCCCC----CC
Confidence            4799999998643211     1  11266899999998887654432   11   2469999997532 22111    00


Q ss_pred             CCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCcc-ccccccccCCCcccc
Q 043792          165 DFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPY-LKGAAEMYEDGVMAS  240 (294)
Q Consensus       165 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~-~~~~~~~~~~~~~~~  240 (294)
                                       ..|+.+|.+.+.+++.++.+.   +++++++|||.+..+........ ..... ........+
T Consensus       155 -----------------~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~-~~~~~~~~~  216 (248)
T PRK06947        155 -----------------VDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAARL-GAQTPLGRA  216 (248)
T ss_pred             -----------------cccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHHH-hhcCCCCCC
Confidence                             469999999999998888764   79999999999987752211100 00000 000011125


Q ss_pred             ccHHHHHHHHHhhhcCcC--CCCeEEe
Q 043792          241 VDLRFYVDAHICVFEDVS--SYGRYLC  265 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~~--~~~~~~~  265 (294)
                      ..++|+++.++.++.++.  ..|+++.
T Consensus       217 ~~~e~va~~~~~l~~~~~~~~~G~~~~  243 (248)
T PRK06947        217 GEADEVAETIVWLLSDAASYVTGALLD  243 (248)
T ss_pred             cCHHHHHHHHHHHcCccccCcCCceEe
Confidence            778999999999987653  3556543

>PRK12743 oxidoreductase; Provisional

Probab=99.87  E-value=5.5e-20  Score=153.99  Aligned_cols=213  Identities=13%  Similarity=0.050  Sum_probs=147.0

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC-ChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG-KLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------   97 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------   97 (294)
                      +++|+||||+|+||+++++.|+++|++|+++.++.. ..+.+..+  ......++.++.+|+++.++++.+++       
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEE--VRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLG   79 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHH--HHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            579999999999999999999999999998876543 33333332  22234578899999999988877665       


Q ss_pred             cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc----CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT----NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                      .+|+|||+++.......      .....+++|+.++.++++++...    ++-+++|++||........           
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~-----------  148 (256)
T PRK12743         80 RIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLP-----------  148 (256)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCC-----------
Confidence            47999999987543211      12377899999999999887654    1235899999974211111           


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-cccccccccCCCccccccH
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YLKGAAEMYEDGVMASVDL  243 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~v~v  243 (294)
                            +.      ..|+.+|.+.+.+++.++.+   .+++++.++||.+.++....... .........+.+  .+.+.
T Consensus       149 ------~~------~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~--~~~~~  214 (256)
T PRK12743        149 ------GA------SAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDVKPDSRPGIPLG--RPGDT  214 (256)
T ss_pred             ------Cc------chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChHHHHHHHhcCCCC--CCCCH
Confidence                  01      67999999999999888765   47999999999998875321110 000000111111  26688


Q ss_pred             HHHHHHHHhhhcCcC--CCCeEEe
Q 043792          244 RFYVDAHICVFEDVS--SYGRYLC  265 (294)
Q Consensus       244 ~D~a~~i~~~~~~~~--~~~~~~~  265 (294)
                      +|++.++..++....  ..|.++.
T Consensus       215 ~dva~~~~~l~~~~~~~~~G~~~~  238 (256)
T PRK12743        215 HEIASLVAWLCSEGASYTTGQSLI  238 (256)
T ss_pred             HHHHHHHHHHhCccccCcCCcEEE
Confidence            999999998886543  3465443

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.87  E-value=1.7e-20  Score=157.45  Aligned_cols=225  Identities=13%  Similarity=0.059  Sum_probs=147.2

Q ss_pred             CCCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC-CChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc---
Q 043792           22 SSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNH-GKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK---   97 (294)
Q Consensus        22 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---   97 (294)
                      ...++++|+||||+++||+++++.|+++|++|+++.|+. +..+.+..++.. ..+.++.++.+|++|+++++++++   
T Consensus         4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~   82 (260)
T PRK08416          4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQ-KYGIKAKAYPLNILEPETYKELFKKID   82 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHH-hcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            345678999999999999999999999999998886643 333333332111 123468899999999988877765   


Q ss_pred             ----cCCEEEecCCCCCC------CC------cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCC
Q 043792           98 ----GCSGLFYSFEPPSD------HS------TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHR  158 (294)
Q Consensus        98 ----~~d~Vih~a~~~~~------~~------~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~  158 (294)
                          ++|++||||+....      ..      ......+++|+.+...+.+.+...   .+..++|++||.++..+....
T Consensus        83 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  162 (260)
T PRK08416         83 EDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENY  162 (260)
T ss_pred             HhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCCc
Confidence                47999999975321      00      111267788888777666654432   144689999997533222111


Q ss_pred             CCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccccccCC
Q 043792          159 DNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAAEMYED  235 (294)
Q Consensus       159 ~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~  235 (294)
                                             ..|+.+|.+.+.+.+.++.+.   |+++.+++||.+-.+..................
T Consensus       163 -----------------------~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~  219 (260)
T PRK08416        163 -----------------------AGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEEL  219 (260)
T ss_pred             -----------------------ccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhc
Confidence                                   579999999999999998875   899999999988655311100000000000001


Q ss_pred             -CccccccHHHHHHHHHhhhcCc--CCCCeEEeecccc
Q 043792          236 -GVMASVDLRFYVDAHICVFEDV--SSYGRYLCFNHVI  270 (294)
Q Consensus       236 -~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~~~~  270 (294)
                       ....+..++|+|.++++++...  ...|+++..++..
T Consensus       220 ~~~~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vdgg~  257 (260)
T PRK08416        220 SPLNRMGQPEDLAGACLFLCSEKASWLTGQTIVVDGGT  257 (260)
T ss_pred             CCCCCCCCHHHHHHHHHHHcChhhhcccCcEEEEcCCe
Confidence             1112788999999999988643  2356654444333

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.87  E-value=2.5e-20  Score=155.59  Aligned_cols=214  Identities=11%  Similarity=-0.001  Sum_probs=147.8

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++|+++||||+|.||+.++++|+++|++|++++|+..  +.+...  ....+.++.++.+|++|++++.++++      
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~--~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12481          6 LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQ--VEALGRKFHFITADLIQQKDIDSIVSQAVEVM   81 (251)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHH--HHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHc
Confidence            45689999999999999999999999999999887642  222221  11224568899999999998888775      


Q ss_pred             -cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---CC-CcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---NT-VDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                       ++|++||||+......      ...+..+++|+.++..+.+++.+.   ++ -.++|++||..++......        
T Consensus        82 g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~--------  153 (251)
T PRK12481         82 GHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRV--------  153 (251)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCC--------
Confidence             4799999998644221      112378899999999888876543   12 3589999997533211111        


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc---cccccccccCCCcccc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP---YLKGAAEMYEDGVMAS  240 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~---~~~~~~~~~~~~~~~~  240 (294)
                                     ..|+.+|.+.+.+.+.++.+   +|+++.+++||.+-.+.......   ..+......+.  ..+
T Consensus       154 ---------------~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~--~~~  216 (251)
T PRK12481        154 ---------------PSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPA--SRW  216 (251)
T ss_pred             ---------------cchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCC--CCC
Confidence                           56999999999999988875   58999999999997654211000   00000001111  227


Q ss_pred             ccHHHHHHHHHhhhcCc--CCCCeEEee
Q 043792          241 VDLRFYVDAHICVFEDV--SSYGRYLCF  266 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~--~~~~~~~~~  266 (294)
                      ...+|+|++++.++...  ...|+.+..
T Consensus       217 ~~peeva~~~~~L~s~~~~~~~G~~i~v  244 (251)
T PRK12481        217 GTPDDLAGPAIFLSSSASDYVTGYTLAV  244 (251)
T ss_pred             cCHHHHHHHHHHHhCccccCcCCceEEE
Confidence            88999999999998643  335554433

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.87  E-value=7.1e-20  Score=154.71  Aligned_cols=214  Identities=16%  Similarity=0.099  Sum_probs=147.3

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCCh-------hhHHHHHhhccCCCCeEEEECCCCChhHHHHH
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKL-------QCIEEELINYNEEKKLKVFQADPFDYHSLVNA   95 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~   95 (294)
                      ..++++++||||+|+||+++++.|+++|++|++++|+.+..       +.+.++  ......++.++.+|+++++++.++
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~D~~~~~~i~~~   80 (273)
T PRK08278          3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEE--IEAAGGQALPLVGDVRDEDQVAAA   80 (273)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHH--HHhcCCceEEEEecCCCHHHHHHH
Confidence            34568999999999999999999999999999999976532       112221  112344688899999999988877


Q ss_pred             hc-------cCCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCC
Q 043792           96 LK-------GCSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRD  159 (294)
Q Consensus        96 ~~-------~~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~  159 (294)
                      ++       ++|+|||+++........      .++.+++|+.++.++++++...   ++-.++|++||..... + .  
T Consensus        81 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-~-~--  156 (273)
T PRK08278         81 VAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLD-P-K--  156 (273)
T ss_pred             HHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcc-c-c--
Confidence            65       579999999864322111      1377889999999999998643   2335899998853111 0 0  


Q ss_pred             CCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCc-eeCCCCCCCCccccccccccCC
Q 043792          160 NPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGL-VMGPDVTISNPYLKGAAEMYED  235 (294)
Q Consensus       160 ~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~-i~G~~~~~~~~~~~~~~~~~~~  235 (294)
                                 +..+.      ..|+.+|.+.+.+++.++.+.   +++++.+.|+. +-.+.   ...+..+..     
T Consensus       157 -----------~~~~~------~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~---~~~~~~~~~-----  211 (273)
T PRK08278        157 -----------WFAPH------TAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAA---VRNLLGGDE-----  211 (273)
T ss_pred             -----------ccCCc------chhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHH---HHhcccccc-----
Confidence                       00011      679999999999999998775   79999999984 43221   010111110     


Q ss_pred             CccccccHHHHHHHHHhhhcCcC--CCCeEEeec
Q 043792          236 GVMASVDLRFYVDAHICVFEDVS--SYGRYLCFN  267 (294)
Q Consensus       236 ~~~~~v~v~D~a~~i~~~~~~~~--~~~~~~~~~  267 (294)
                      ....+...+|+|++++.++....  .+|+++..+
T Consensus       212 ~~~~~~~p~~va~~~~~l~~~~~~~~~G~~~~~~  245 (273)
T PRK08278        212 AMRRSRTPEIMADAAYEILSRPAREFTGNFLIDE  245 (273)
T ss_pred             cccccCCHHHHHHHHHHHhcCccccceeEEEecc
Confidence            11126788999999999987543  356655433

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.87  E-value=2.1e-21  Score=151.91  Aligned_cols=239  Identities=16%  Similarity=0.080  Sum_probs=176.5

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHC-CCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLR-GYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GC   99 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~   99 (294)
                      ..+..+|||||+-|.+|..+++.|..+ |.+-++++.-..+.+...+         .-.++..|+.|...+++.+-  ++
T Consensus        41 ~~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~~---------~GPyIy~DILD~K~L~eIVVn~RI  111 (366)
T KOG2774|consen   41 TQKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVTD---------VGPYIYLDILDQKSLEEIVVNKRI  111 (366)
T ss_pred             cCCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhcc---------cCCchhhhhhccccHHHhhccccc
Confidence            445689999999999999999999886 7666666543333333322         44688899999999988874  58


Q ss_pred             CEEEecCCCCC-CCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhh
Q 043792          100 SGLFYSFEPPS-DHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCK  178 (294)
Q Consensus       100 d~Vih~a~~~~-~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~  178 (294)
                      |.+||..+..+ ....+-.-...+|+.|..|+++.++++ +. ++...|++++++.....    . |...-.      ..
T Consensus       112 dWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~-kL-~iFVPSTIGAFGPtSPR----N-PTPdlt------IQ  178 (366)
T KOG2774|consen  112 DWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKH-KL-KVFVPSTIGAFGPTSPR----N-PTPDLT------IQ  178 (366)
T ss_pred             ceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHc-Ce-eEeecccccccCCCCCC----C-CCCCee------ee
Confidence            99999944322 111122256789999999999999999 76 56678998865433222    1 222222      33


Q ss_pred             hccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-----------cccccc--cccCCCccccccHHH
Q 043792          179 KFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-----------YLKGAA--EMYEDGVMASVDLRF  245 (294)
Q Consensus       179 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-----------~~~~~~--~~~~~~~~~~v~v~D  245 (294)
                      .+.+.||.||..+|.+-+.+..+.|+++.++|++.++...-..++.           ..+|+-  ...+|...+++|..|
T Consensus       179 RPRTIYGVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~d  258 (366)
T KOG2774|consen  179 RPRTIYGVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTD  258 (366)
T ss_pred             cCceeechhHHHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHH
Confidence            3449999999999999999999999999999999998765443332           344554  455788888999999


Q ss_pred             HHHHHHhhhcCcCCC--C-eEEeecccccHHHHHHHHHHHh
Q 043792          246 YVDAHICVFEDVSSY--G-RYLCFNHVINCNEDAMKLARML  283 (294)
Q Consensus       246 ~a~~i~~~~~~~~~~--~-~~~~~~~~~s~~~~~~~~~~~~  283 (294)
                      |.++++..+..+...  . .|++.+-.+|..|++..+.+.+
T Consensus       259 c~~~~~~~~~a~~~~lkrr~ynvt~~sftpee~~~~~~~~~  299 (366)
T KOG2774|consen  259 CMASVIQLLAADSQSLKRRTYNVTGFSFTPEEIADAIRRVM  299 (366)
T ss_pred             HHHHHHHHHhCCHHHhhhheeeeceeccCHHHHHHHHHhhC
Confidence            999999988765432  2 3999999999999999998754

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.87  E-value=3.5e-20  Score=155.42  Aligned_cols=217  Identities=15%  Similarity=0.039  Sum_probs=148.9

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++||||||+|+||+++++.|+++|++|++++|+.++.+.+...+  .....++.++.+|++|++++.++++      
T Consensus        10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i--~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~   87 (259)
T PRK08213         10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHL--EALGIDALWIAADVADEADIERLAEETLERF   87 (259)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH--HhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            34689999999999999999999999999999999866554444321  1223467889999999998876654      


Q ss_pred             -cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc----CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT----NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                       .+|+|||+++.......      ..+..+++|+.++.++++++.+.    ++.++||++||...+ ++...    .  .
T Consensus        88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~-~~~~~----~--~  160 (259)
T PRK08213         88 GHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGL-GGNPP----E--V  160 (259)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhc-cCCCc----c--c
Confidence             47999999986432211      11267889999999999987543    255799999997532 22211    0  0


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccc-ccc-CCCccccc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAA-EMY-EDGVMASV  241 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~-~~~-~~~~~~~v  241 (294)
                            .+.      ..|+.+|.+.+.+++.++.+.   ++++.+++|+.+-++....   ...... ... ......+.
T Consensus       161 ------~~~------~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~---~~~~~~~~~~~~~~~~~~~  225 (259)
T PRK08213        161 ------MDT------IAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRG---TLERLGEDLLAHTPLGRLG  225 (259)
T ss_pred             ------cCc------chHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhh---hhHHHHHHHHhcCCCCCCc
Confidence                  011      679999999999999988764   7999999999886654211   111000 000 01111256


Q ss_pred             cHHHHHHHHHhhhcCc--CCCCeEE
Q 043792          242 DLRFYVDAHICVFEDV--SSYGRYL  264 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~--~~~~~~~  264 (294)
                      ..+|++.++..++...  ...|..+
T Consensus       226 ~~~~va~~~~~l~~~~~~~~~G~~~  250 (259)
T PRK08213        226 DDEDLKGAALLLASDASKHITGQIL  250 (259)
T ss_pred             CHHHHHHHHHHHhCccccCccCCEE
Confidence            6899999988888643  2345543

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.87  E-value=2.5e-20  Score=155.66  Aligned_cols=212  Identities=15%  Similarity=0.116  Sum_probs=145.5

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecC-CCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc-----
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHN-HGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG-----   98 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-----   98 (294)
                      ++++|+||||+|+||+++++.|+++|++|++..++ .+..+.+..+     ...++.++.+|+.|++++.+++++     
T Consensus         4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (253)
T PRK08642          4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADE-----LGDRAIALQADVTDREQVQAMFATATEHF   78 (253)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-----hCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            45799999999999999999999999999887654 3333333331     124688999999999988877753     


Q ss_pred             ---CCEEEecCCCCCC---------C-C--cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCC
Q 043792           99 ---CSGLFYSFEPPSD---------H-S--TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDN  160 (294)
Q Consensus        99 ---~d~Vih~a~~~~~---------~-~--~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~  160 (294)
                         +|++||+++....         . .  ....+.+++|+.++.++++++...   .+..++|++||...  ....   
T Consensus        79 g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~--~~~~---  153 (253)
T PRK08642         79 GKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLF--QNPV---  153 (253)
T ss_pred             CCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccc--cCCC---
Confidence               8999999875210         0 0  111367999999999999988632   24578999998631  1100   


Q ss_pred             CCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccc-ccc--C
Q 043792          161 PTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAA-EMY--E  234 (294)
Q Consensus       161 ~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~-~~~--~  234 (294)
                                  .+.      ..|+.+|.+.+.+++.++.+   .++++..++||.+..+......   .... ..+  .
T Consensus       154 ------------~~~------~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~---~~~~~~~~~~~  212 (253)
T PRK08642        154 ------------VPY------HDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAAT---PDEVFDLIAAT  212 (253)
T ss_pred             ------------CCc------cchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccC---CHHHHHHHHhc
Confidence                        011      67999999999999999876   3799999999999765321110   0000 000  0


Q ss_pred             CCccccccHHHHHHHHHhhhcCc--CCCCe-EEeec
Q 043792          235 DGVMASVDLRFYVDAHICVFEDV--SSYGR-YLCFN  267 (294)
Q Consensus       235 ~~~~~~v~v~D~a~~i~~~~~~~--~~~~~-~~~~~  267 (294)
                      .....+.+++|+|++++.++...  ...|. +.+.+
T Consensus       213 ~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~vdg  248 (253)
T PRK08642        213 TPLRKVTTPQEFADAVLFFASPWARAVTGQNLVVDG  248 (253)
T ss_pred             CCcCCCCCHHHHHHHHHHHcCchhcCccCCEEEeCC
Confidence            11123889999999999999743  33555 33433

>PRK09242 tropinone reductase; Provisional

Probab=99.87  E-value=4.3e-20  Score=154.74  Aligned_cols=215  Identities=15%  Similarity=0.084  Sum_probs=150.5

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      ..+++++||||+|.||+++++.|+++|++|++++|+.+..+.+..++.......++.++.+|+++.+++.++++      
T Consensus         7 ~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (257)
T PRK09242          7 LDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW   86 (257)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            35689999999999999999999999999999999876655554432111123468889999999988776664      


Q ss_pred             -cCCEEEecCCCCCCC------CcchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDH------STYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~------~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                       ++|+|||+++.....      ....+..+.+|+.++.++++++.+.   .+.+++|++||..+.......         
T Consensus        87 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~---------  157 (257)
T PRK09242         87 DGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSG---------  157 (257)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCC---------
Confidence             479999999863321      1112378899999999998887532   245789999997532211111         


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccc---cccCC-Ccccc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAA---EMYED-GVMAS  240 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~---~~~~~-~~~~~  240 (294)
                                    ..|+.+|.+.+.+++.++.+   .+++++.++||.+.++....   ......   ..... ....+
T Consensus       158 --------------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~---~~~~~~~~~~~~~~~~~~~~  220 (257)
T PRK09242        158 --------------APYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSG---PLSDPDYYEQVIERTPMRRV  220 (257)
T ss_pred             --------------cchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCccccc---ccCChHHHHHHHhcCCCCCC
Confidence                          67999999999999988765   48999999999998876321   111110   00011 11126


Q ss_pred             ccHHHHHHHHHhhhcCcC--CCCeEE
Q 043792          241 VDLRFYVDAHICVFEDVS--SYGRYL  264 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~~--~~~~~~  264 (294)
                      ...+|++.+++.++....  ..|+.+
T Consensus       221 ~~~~~va~~~~~l~~~~~~~~~g~~i  246 (257)
T PRK09242        221 GEPEEVAAAVAFLCMPAASYITGQCI  246 (257)
T ss_pred             cCHHHHHHHHHHHhCcccccccCCEE
Confidence            678999999999886432  245543

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.87  E-value=4.8e-20  Score=154.41  Aligned_cols=206  Identities=17%  Similarity=0.075  Sum_probs=140.5

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC----hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc---
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK----LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK---   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---   97 (294)
                      ++++++||||+|+||+++++.|+++|++|+++.++...    .+.+.+++  .....++.++.+|++|++++.++++   
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAV--KAAGAKAVAFQADLTTAAAVEKLFDDAK   84 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHH--HHhCCcEEEEecCcCCHHHHHHHHHHHH
Confidence            46899999999999999999999999997777664322    22222211  1123468889999999998887765   


Q ss_pred             ----cCCEEEecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEe-cCcceeeeCCCCCCCCCCC
Q 043792           98 ----GCSGLFYSFEPPSDHS----T--YDELTAEVETMAAHNVLEACAQT-NTVDKVVFT-SSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 ----~~d~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~-Ss~~~~~~~~~~~~~~~~~  165 (294)
                          ++|++||+|+......    .  ..++.+++|+.++..+++++.+. ....+++++ ||.. ..+....       
T Consensus        85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~-~~~~~~~-------  156 (257)
T PRK12744         85 AAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLL-GAFTPFY-------  156 (257)
T ss_pred             HhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchh-cccCCCc-------
Confidence                4799999998743211    1  12378899999999999998754 112466665 4432 1221111       


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc--c-c--cccccccCCCc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP--Y-L--KGAAEMYEDGV  237 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~--~-~--~~~~~~~~~~~  237 (294)
                                      ..|+.+|.+.|.+.+.++.+.   ++++++++||.+.++.......  . .  .......+...
T Consensus       157 ----------------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (257)
T PRK12744        157 ----------------SAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSK  220 (257)
T ss_pred             ----------------ccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhccccccccccccc
Confidence                            679999999999999998775   6999999999997764211110  0 0  00000111111


Q ss_pred             cccccHHHHHHHHHhhhcC
Q 043792          238 MASVDLRFYVDAHICVFED  256 (294)
Q Consensus       238 ~~~v~v~D~a~~i~~~~~~  256 (294)
                      ..+.+++|+|.++..++..
T Consensus       221 ~~~~~~~dva~~~~~l~~~  239 (257)
T PRK12744        221 TGLTDIEDIVPFIRFLVTD  239 (257)
T ss_pred             CCCCCHHHHHHHHHHhhcc
Confidence            2378999999999999974

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.87  E-value=4e-20  Score=153.05  Aligned_cols=202  Identities=17%  Similarity=0.130  Sum_probs=143.7

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------   97 (294)
                      ++++|+||||+|+||+++++.|+++|++|++++|+++..+.+...+   ....++.++.+|+++++++.++++       
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   80 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTL---SKYGNIHYVVGDVSSTESARNVIEKAAKVLN   80 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---HhcCCeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            4689999999999999999999999999999999876555543321   112368899999999988877664       


Q ss_pred             cCCEEEecCCCCCCCCcc----hhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCC
Q 043792           98 GCSGLFYSFEPPSDHSTY----DELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWS  172 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~~~----~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~  172 (294)
                      .+|.+||+++........    .+..++.|+.+..++++.+.+. ....++|++||..+. ++...              
T Consensus        81 ~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~-~~~~~--------------  145 (238)
T PRK05786         81 AIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGI-YKASP--------------  145 (238)
T ss_pred             CCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhc-ccCCC--------------
Confidence            369999998754322111    1266889999988888887654 122579999987421 11100              


Q ss_pred             ChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHHHHHH
Q 043792          173 DVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDA  249 (294)
Q Consensus       173 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~  249 (294)
                       ..      ..|+.+|.+.+.+++.++.+.   +++++++||++++++...... + +.    .......++..+|++++
T Consensus       146 -~~------~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~~-~-~~----~~~~~~~~~~~~~va~~  212 (238)
T PRK05786        146 -DQ------LSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPERN-W-KK----LRKLGDDMAPPEDFAKV  212 (238)
T ss_pred             -Cc------hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchhh-h-hh----hccccCCCCCHHHHHHH
Confidence             01      569999999999888887664   899999999999987521110 0 10    11111126778999999


Q ss_pred             HHhhhcCc
Q 043792          250 HICVFEDV  257 (294)
Q Consensus       250 i~~~~~~~  257 (294)
                      ++.++..+
T Consensus       213 ~~~~~~~~  220 (238)
T PRK05786        213 IIWLLTDE  220 (238)
T ss_pred             HHHHhccc
Confidence            99998653

>PRK08324 short chain dehydrogenase; Validated

Probab=99.86  E-value=4.2e-20  Score=174.17  Aligned_cols=219  Identities=18%  Similarity=0.117  Sum_probs=155.2

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      ..+++||||||+|+||+++++.|+++|++|++++|+.+..+.+..++   ....++.++.+|++|.+++.++++      
T Consensus       420 l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l---~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~  496 (681)
T PRK08324        420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAEL---GGPDRALGVACDVTDEAAVQAAFEEAALAF  496 (681)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHH---hccCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            35689999999999999999999999999999999876655544421   111478899999999998877765      


Q ss_pred             -cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc---CCC-cEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT---NTV-DKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~---~~~-~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                       ++|+||||+|.......      ..+..+++|+.++.++++++.+.   .+. .+||++||..+...+...        
T Consensus       497 g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~--------  568 (681)
T PRK08324        497 GGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNF--------  568 (681)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCc--------
Confidence             57999999986543211      12377899999999997776532   133 689999997643222111        


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCcee-CCCCCCCCc-----cccccc-----cc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVM-GPDVTISNP-----YLKGAA-----EM  232 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~-G~~~~~~~~-----~~~~~~-----~~  232 (294)
                                     ..|+.+|.+.+.+++.++.+.   ++++++++|+.+| +........     ...+..     ..
T Consensus       569 ---------------~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~  633 (681)
T PRK08324        569 ---------------GAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEF  633 (681)
T ss_pred             ---------------HHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHH
Confidence                           679999999999999988764   6999999999998 554221110     001111     11


Q ss_pred             cCCC--ccccccHHHHHHHHHhhhc--CcCCCCe-EEeecc
Q 043792          233 YEDG--VMASVDLRFYVDAHICVFE--DVSSYGR-YLCFNH  268 (294)
Q Consensus       233 ~~~~--~~~~v~v~D~a~~i~~~~~--~~~~~~~-~~~~~~  268 (294)
                      +.++  ...+++++|+|++++.++.  ....+|. +.+.++
T Consensus       634 ~~~~~~l~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdgG  674 (681)
T PRK08324        634 YRARNLLKREVTPEDVAEAVVFLASGLLSKTTGAIITVDGG  674 (681)
T ss_pred             HHhcCCcCCccCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence            2222  2238999999999999884  3444565 555443

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.86  E-value=7.9e-20  Score=152.93  Aligned_cols=201  Identities=15%  Similarity=0.057  Sum_probs=140.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++|+||||+|+||++++++|+++|++|++++|+....+.+.++  .     ...++.+|+++.+++.++++      
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~--~-----~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADE--V-----GGLFVPTDVTDEDAVNALFDTAAETY   77 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH--c-----CCcEEEeeCCCHHHHHHHHHHHHHHc
Confidence            4568999999999999999999999999999999986554444331  1     23678899999998887775      


Q ss_pred             -cCCEEEecCCCCCCCC-----c---chhhhHhHhhHHHHHHHHHHHh----cCCCcEEEEecCcceeeeCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS-----T---YDELTAEVETMAAHNVLEACAQ----TNTVDKVVFTSSLTAVVWNNHRDNPTSH  164 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~-----~---~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  164 (294)
                       ++|+|||+++......     .   ..+..+++|+.++.++++++..    . +..++|++||..+ .++...    . 
T Consensus        78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~~sS~~~-~~g~~~----~-  150 (255)
T PRK06057         78 GSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQ-GKGSIINTASFVA-VMGSAT----S-  150 (255)
T ss_pred             CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHh-CCcEEEEEcchhh-ccCCCC----C-
Confidence             4699999998643211     1   1237788999999888777643    3 4468999998642 222111    0 


Q ss_pred             CCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccc----c-ccCCC
Q 043792          165 DFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAA----E-MYEDG  236 (294)
Q Consensus       165 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~----~-~~~~~  236 (294)
                                .      ..|+.+|.+.+.+.+.++.+   .+++++++|||.+.++....   .....+    . ...-.
T Consensus       151 ----------~------~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~---~~~~~~~~~~~~~~~~~  211 (255)
T PRK06057        151 ----------Q------ISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQE---LFAKDPERAARRLVHVP  211 (255)
T ss_pred             ----------C------cchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhh---hccCCHHHHHHHHhcCC
Confidence                      0      56999998887777765543   37999999999998876321   111111    0 00001


Q ss_pred             ccccccHHHHHHHHHhhhcCc
Q 043792          237 VMASVDLRFYVDAHICVFEDV  257 (294)
Q Consensus       237 ~~~~v~v~D~a~~i~~~~~~~  257 (294)
                      ...+.+++|+++++..++...
T Consensus       212 ~~~~~~~~~~a~~~~~l~~~~  232 (255)
T PRK06057        212 MGRFAEPEEIAAAVAFLASDD  232 (255)
T ss_pred             CCCCcCHHHHHHHHHHHhCcc
Confidence            123789999999998887643

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.86  E-value=7.8e-20  Score=153.39  Aligned_cols=220  Identities=15%  Similarity=0.021  Sum_probs=151.8

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCe-EEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYT-VHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      ..++++|+||||+|+||+++++.|+++|++ |++++|+.++...+..++  .....++.++.+|+++++++.++++    
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAEL--EALGAKAVFVQADLSDVEDCRRVVAAADE   80 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHH--HhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            345689999999999999999999999999 999999865554433322  1233467889999999998887765    


Q ss_pred             ---cCCEEEecCCCCCCCCc---c---hhhhHhHhhHHHHHHHHHHHhc----CCCcEEEEecCcceeeeCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHST---Y---DELTAEVETMAAHNVLEACAQT----NTVDKVVFTSSLTAVVWNNHRDNPTSH  164 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~~---~---~~~~~~~n~~~~~~ll~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~  164 (294)
                         ++|+|||+++.......   .   .+..+++|+.++.++++++.+.    ....++|++||..++. +...    . 
T Consensus        81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~-~~~~----~-  154 (260)
T PRK06198         81 AFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHG-GQPF----L-  154 (260)
T ss_pred             HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCccccc-CCCC----c-
Confidence               47999999987542211   1   1367899999999998887543    1235799999975322 1111    1 


Q ss_pred             CCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc-ccccccccc-----CC
Q 043792          165 DFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP-YLKGAAEMY-----ED  235 (294)
Q Consensus       165 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~~~-----~~  235 (294)
                                       ..|+.+|.+.|.+.+.++.+.   +++++.++|+.++++....... +........     ..
T Consensus       155 -----------------~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~  217 (260)
T PRK06198        155 -----------------AAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQ  217 (260)
T ss_pred             -----------------chhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccC
Confidence                             679999999999999887664   6999999999998886311000 100000000     11


Q ss_pred             CccccccHHHHHHHHHhhhcCcC--CCCeE-Eeec
Q 043792          236 GVMASVDLRFYVDAHICVFEDVS--SYGRY-LCFN  267 (294)
Q Consensus       236 ~~~~~v~v~D~a~~i~~~~~~~~--~~~~~-~~~~  267 (294)
                      ....+++++|+++++++++....  ..|+. .+.+
T Consensus       218 ~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~~  252 (260)
T PRK06198        218 PFGRLLDPDEVARAVAFLLSDESGLMTGSVIDFDQ  252 (260)
T ss_pred             CccCCcCHHHHHHHHHHHcChhhCCccCceEeECC
Confidence            11237899999999999886543  24553 4444

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.86  E-value=6e-20  Score=153.68  Aligned_cols=218  Identities=12%  Similarity=0.066  Sum_probs=151.2

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      ..+++|+||||+|+||+++++.|+++|++|++++|+....+.+..++  .....++.++.+|++|.+++.++++      
T Consensus         9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l--~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   86 (255)
T PRK06113          9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEI--QQLGGQAFACRCDITSEQELSALADFALSKL   86 (255)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH--HhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999998766555544422  1223467888999999998877654      


Q ss_pred             -cCCEEEecCCCCCCCC-----cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS-----TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~-----~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                       ++|++||+++......     ...+..+++|+.++.++++++...   .+..++|++||..+.. +...    .     
T Consensus        87 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-~~~~----~-----  156 (255)
T PRK06113         87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN-KNIN----M-----  156 (255)
T ss_pred             CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccC-CCCC----c-----
Confidence             4699999998643221     112266899999999999998632   1345899999975321 1111    1     


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCC-ccccccccccCC-CccccccH
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISN-PYLKGAAEMYED-GVMASVDL  243 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~-~~~~~~~~~~~~-~~~~~v~v  243 (294)
                                   ..|+.+|.+.+.+++.++.+   .+++++++.||.+..+...... .....  ..... ....+..+
T Consensus       157 -------------~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~--~~~~~~~~~~~~~~  221 (255)
T PRK06113        157 -------------TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQ--KMLQHTPIRRLGQP  221 (255)
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHH--HHHhcCCCCCCcCH
Confidence                         67999999999999998765   4799999999999765421100 00000  00111 11127789


Q ss_pred             HHHHHHHHhhhcCcC--CCCeE-Eeecc
Q 043792          244 RFYVDAHICVFEDVS--SYGRY-LCFNH  268 (294)
Q Consensus       244 ~D~a~~i~~~~~~~~--~~~~~-~~~~~  268 (294)
                      +|++++++.++....  ..|+. .+.++
T Consensus       222 ~d~a~~~~~l~~~~~~~~~G~~i~~~gg  249 (255)
T PRK06113        222 QDIANAALFLCSPAASWVSGQILTVSGG  249 (255)
T ss_pred             HHHHHHHHHHcCccccCccCCEEEECCC
Confidence            999999999986532  24654 44443

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.86  E-value=7.2e-20  Score=151.16  Aligned_cols=202  Identities=15%  Similarity=0.085  Sum_probs=142.5

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------cC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------GC   99 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------~~   99 (294)
                      +++|+||||+|+||+++++.|+++|++|++++|+...     .   .     ..+++.+|++|.+++.++++      ++
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-----~---~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~~   69 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-----D---F-----PGELFACDLADIEQTAATLAQINEIHPV   69 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-----c---c-----CceEEEeeCCCHHHHHHHHHHHHHhCCC
Confidence            5789999999999999999999999999999998643     1   1     23578899999998887775      57


Q ss_pred             CEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCC
Q 043792          100 SGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERN  170 (294)
Q Consensus       100 d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~  170 (294)
                      |+|||+++.......      .....+++|+.++.++.+++...   .+.+++|++||.+  .++...    .       
T Consensus        70 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~--~~~~~~----~-------  136 (234)
T PRK07577         70 DAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRA--IFGALD----R-------  136 (234)
T ss_pred             cEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccc--ccCCCC----c-------
Confidence            999999987543221      11267889999988887765432   2567999999974  232211    1       


Q ss_pred             CCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccc-cccccCC-CccccccHHH
Q 043792          171 WSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKG-AAEMYED-GVMASVDLRF  245 (294)
Q Consensus       171 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~-~~~~~~~-~~~~~v~v~D  245 (294)
                                 ..|+.+|.+.+.+++.++.+   .+++++++|||.+.++........... ....... ....+...+|
T Consensus       137 -----------~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (234)
T PRK07577        137 -----------TSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEE  205 (234)
T ss_pred             -----------hHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCHHH
Confidence                       67999999999999887755   489999999999987652211100000 0011111 1112567899


Q ss_pred             HHHHHHhhhcCcC--CCCeEE
Q 043792          246 YVDAHICVFEDVS--SYGRYL  264 (294)
Q Consensus       246 ~a~~i~~~~~~~~--~~~~~~  264 (294)
                      +|++++.++..+.  ..|+++
T Consensus       206 ~a~~~~~l~~~~~~~~~g~~~  226 (234)
T PRK07577        206 VAAAIAFLLSDDAGFITGQVL  226 (234)
T ss_pred             HHHHHHHHhCcccCCccceEE
Confidence            9999999987643  345543

>PRK07069 short chain dehydrogenase; Validated

Probab=99.86  E-value=5.4e-20  Score=153.47  Aligned_cols=206  Identities=16%  Similarity=0.034  Sum_probs=141.3

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCCCeEEEEecC-CCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------cC
Q 043792           28 TVCVMDASGHFASALVRRLLLRGYTVHAALHN-HGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------GC   99 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~   99 (294)
                      +|+||||+|+||+++++.|+++|++|++++|+ .+..+.+.+.+........+.++.+|++|.+++.++++       ++
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            48999999999999999999999999999998 54444544422111111234567899999998877764       47


Q ss_pred             CEEEecCCCCCCCCc------chhhhHhHhhH----HHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCC
Q 043792          100 SGLFYSFEPPSDHST------YDELTAEVETM----AAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDER  169 (294)
Q Consensus       100 d~Vih~a~~~~~~~~------~~~~~~~~n~~----~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~  169 (294)
                      |+|||+++.......      .....+++|+.    ++.++++++++. +.++||++||..++......           
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~~ss~~~~~~~~~~-----------  148 (251)
T PRK07069         81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS-QPASIVNISSVAAFKAEPDY-----------  148 (251)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCcEEEEecChhhccCCCCC-----------
Confidence            999999987543211      11367888887    667777777766 66899999998643211111           


Q ss_pred             CCCChhhhhhccchhHhhHHHHHHHHHHHHHhc-----CCeEEEEecCceeCCCCCCCCc-cccccc-cccCC--Ccccc
Q 043792          170 NWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR-----GISMVSINGGLVMGPDVTISNP-YLKGAA-EMYED--GVMAS  240 (294)
Q Consensus       170 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~ilrp~~i~G~~~~~~~~-~~~~~~-~~~~~--~~~~~  240 (294)
                                  ..|+.+|.+.+.+.+.++.+.     +++++.++|+.+.++....... ...... .....  ....+
T Consensus       149 ------------~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (251)
T PRK07069        149 ------------TAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRL  216 (251)
T ss_pred             ------------chhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCC
Confidence                        679999999999999887653     4889999999998886321110 000000 00100  11126


Q ss_pred             ccHHHHHHHHHhhhcCc
Q 043792          241 VDLRFYVDAHICVFEDV  257 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~  257 (294)
                      .+++|+|++++.++..+
T Consensus       217 ~~~~~va~~~~~l~~~~  233 (251)
T PRK07069        217 GEPDDVAHAVLYLASDE  233 (251)
T ss_pred             cCHHHHHHHHHHHcCcc
Confidence            78999999999987653

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.86  E-value=6.9e-20  Score=154.07  Aligned_cols=217  Identities=16%  Similarity=0.117  Sum_probs=148.8

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++++|+||||+|+||+++++.|+++|++|++++|+.+....+..++  .....++.++.+|+++++++.++++     
T Consensus         6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~   83 (264)
T PRK07576          6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQL--QQAGPEGLGVSADVRDYAAVEAAFAQIADE   83 (264)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HHhCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999876544443322  1223457788999999998887765     


Q ss_pred             --cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                        ++|+|||+++......      ...+..+++|+.++.++++++...  +.-+++|++||..+.. +...    .    
T Consensus        84 ~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~-~~~~----~----  154 (264)
T PRK07576         84 FGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFV-PMPM----Q----  154 (264)
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhcc-CCCC----c----
Confidence              3699999987532211      112367889999999999887643  1225899999975321 1111    1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCcccc-ccc-ccc-CC-Ccccc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLK-GAA-EMY-ED-GVMAS  240 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~-~~~-~~~-~~-~~~~~  240 (294)
                                    ..|+.+|.+.+.+++.++.+   .++++++++|+.+.+.... .. ... ... ..+ .. ....+
T Consensus       155 --------------~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~-~~-~~~~~~~~~~~~~~~~~~~~  218 (264)
T PRK07576        155 --------------AHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGM-AR-LAPSPELQAAVAQSVPLKRN  218 (264)
T ss_pred             --------------cHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHH-hh-cccCHHHHHHHHhcCCCCCC
Confidence                          67999999999999988766   4799999999998753210 00 100 000 000 00 11126


Q ss_pred             ccHHHHHHHHHhhhcCcC--CCCeEEee
Q 043792          241 VDLRFYVDAHICVFEDVS--SYGRYLCF  266 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~~--~~~~~~~~  266 (294)
                      ...+|+|++++.++....  ..|.++..
T Consensus       219 ~~~~dva~~~~~l~~~~~~~~~G~~~~~  246 (264)
T PRK07576        219 GTKQDIANAALFLASDMASYITGVVLPV  246 (264)
T ss_pred             CCHHHHHHHHHHHcChhhcCccCCEEEE
Confidence            788999999999997532  35665443

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=6.7e-20  Score=151.46  Aligned_cols=208  Identities=16%  Similarity=0.088  Sum_probs=144.8

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCCh-hHHHHHhccCCEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDY-HSLVNALKGCSGL  102 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~-~~~~~~~~~~d~V  102 (294)
                      .++++++||||+|+||+++++.|+++|++|++++|+....           ...++.++.+|++++ +.+.+.+..+|+|
T Consensus         3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~-----------~~~~~~~~~~D~~~~~~~~~~~~~~id~l   71 (235)
T PRK06550          3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD-----------LSGNFHFLQLDLSDDLEPLFDWVPSVDIL   71 (235)
T ss_pred             CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc-----------cCCcEEEEECChHHHHHHHHHhhCCCCEE
Confidence            3468999999999999999999999999999999875321           123688999999987 4444445578999


Q ss_pred             EecCCCCCC-----CCc--chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCC
Q 043792          103 FYSFEPPSD-----HST--YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWS  172 (294)
Q Consensus       103 ih~a~~~~~-----~~~--~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~  172 (294)
                      ||+++....     ...  ..+..+++|+.++.++++++...   .+.+++|++||..+.......              
T Consensus        72 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--------------  137 (235)
T PRK06550         72 CNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGG--------------  137 (235)
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCC--------------
Confidence            999985321     111  12377999999999999987642   144689999997533211111              


Q ss_pred             ChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccc--ccc-CCCccccccHHHH
Q 043792          173 DVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAA--EMY-EDGVMASVDLRFY  246 (294)
Q Consensus       173 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~--~~~-~~~~~~~v~v~D~  246 (294)
                               ..|+.+|.+.+.+.+.++.+.   ++++++++||.+.++.....  +.....  ... ......+...+|+
T Consensus       138 ---------~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  206 (235)
T PRK06550        138 ---------AAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAAD--FEPGGLADWVARETPIKRWAEPEEV  206 (235)
T ss_pred             ---------cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccc--cCchHHHHHHhccCCcCCCCCHHHH
Confidence                     579999999999988888764   89999999999987753211  111000  000 0111227789999


Q ss_pred             HHHHHhhhcCc--CCCCeEEeec
Q 043792          247 VDAHICVFEDV--SSYGRYLCFN  267 (294)
Q Consensus       247 a~~i~~~~~~~--~~~~~~~~~~  267 (294)
                      |++++.++...  ...|..+..+
T Consensus       207 a~~~~~l~s~~~~~~~g~~~~~~  229 (235)
T PRK06550        207 AELTLFLASGKADYMQGTIVPID  229 (235)
T ss_pred             HHHHHHHcChhhccCCCcEEEEC
Confidence            99999998643  2345544333

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.86  E-value=4.8e-20  Score=157.53  Aligned_cols=209  Identities=19%  Similarity=0.113  Sum_probs=147.6

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ...+++|+||||+|.||+++++.|+++|++|++++|+.+..+.+.+++   .....+..+.+|++|.+++.++++     
T Consensus         6 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l---~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   82 (296)
T PRK05872          6 SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAEL---GGDDRVLTVVADVTDLAAMQAAAEEAVER   82 (296)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cCCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999876665555422   223356667799999988877764     


Q ss_pred             --cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                        .+|+||||||.......      ..++.+++|+.++.++++++...  ....++|++||.+++......         
T Consensus        83 ~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  153 (296)
T PRK05872         83 FGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPGM---------  153 (296)
T ss_pred             cCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCCCc---------
Confidence              47999999997542211      11377899999999999987643  123589999997633211111         


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc---cccccccccCCCccccc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP---YLKGAAEMYEDGVMASV  241 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~---~~~~~~~~~~~~~~~~v  241 (294)
                                    ..|+.+|.+.+.+.+.++.+   .|+.+++++||.+..+.......   .........+.....++
T Consensus       154 --------------~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~  219 (296)
T PRK05872        154 --------------AAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTT  219 (296)
T ss_pred             --------------hHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCC
Confidence                          67999999999999888754   58999999999997664221110   00000000011112378


Q ss_pred             cHHHHHHHHHhhhcCc
Q 043792          242 DLRFYVDAHICVFEDV  257 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~  257 (294)
                      .++|+|++++.++.+.
T Consensus       220 ~~~~va~~i~~~~~~~  235 (296)
T PRK05872        220 SVEKCAAAFVDGIERR  235 (296)
T ss_pred             CHHHHHHHHHHHHhcC
Confidence            8999999999998754

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.86  E-value=1.5e-19  Score=152.08  Aligned_cols=216  Identities=12%  Similarity=0.003  Sum_probs=152.5

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      ..+++++||||+|+||++++++|+++|++|+++.|+.++.+.+...+  .....++.++.+|++|.+++.+++.      
T Consensus         8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   85 (265)
T PRK07097          8 LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAY--RELGIEAHGYVCDVTDEDGVQAMVSQIEKEV   85 (265)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH--HhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            35689999999999999999999999999999998876655544422  1223468899999999999888775      


Q ss_pred             -cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                       .+|+|||+++......      ......+++|+.++..+++++...   .+..+||++||..+. ++...    .    
T Consensus        86 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~-~~~~~----~----  156 (265)
T PRK07097         86 GVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSE-LGRET----V----  156 (265)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCcccc-CCCCC----C----
Confidence             3799999998754321      112377889999998888876542   245789999997532 22111    1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc-ccccccc-----ccCC-Cc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP-YLKGAAE-----MYED-GV  237 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~-----~~~~-~~  237 (294)
                                    ..|+.+|.+.+.+.+.++.+.   +++++.++||.+.++....... ...+...     .... ..
T Consensus       157 --------------~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (265)
T PRK07097        157 --------------SAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPA  222 (265)
T ss_pred             --------------ccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCc
Confidence                          679999999999999998774   8999999999998875321110 0011110     0001 11


Q ss_pred             cccccHHHHHHHHHhhhcCc--CCCCeEE
Q 043792          238 MASVDLRFYVDAHICVFEDV--SSYGRYL  264 (294)
Q Consensus       238 ~~~v~v~D~a~~i~~~~~~~--~~~~~~~  264 (294)
                      ..+...+|+|..++.++...  ..+|+.+
T Consensus       223 ~~~~~~~dva~~~~~l~~~~~~~~~g~~~  251 (265)
T PRK07097        223 ARWGDPEDLAGPAVFLASDASNFVNGHIL  251 (265)
T ss_pred             cCCcCHHHHHHHHHHHhCcccCCCCCCEE
Confidence            12778899999999998753  3355543

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.86  E-value=5.8e-20  Score=154.17  Aligned_cols=212  Identities=13%  Similarity=0.052  Sum_probs=145.1

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++||||||+|+||+++++.|+++|++|++++|+....           ...++.++.+|+.|.+++.++++      
T Consensus         7 ~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~-----------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (260)
T PRK06523          7 LAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD-----------LPEGVEFVAADLTTAEGCAAVARAVLERL   75 (260)
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh-----------cCCceeEEecCCCCHHHHHHHHHHHHHHc
Confidence            4568999999999999999999999999999999975421           12368899999999988776553      


Q ss_pred             -cCCEEEecCCCCCCC--------CcchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDH--------STYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~--------~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                       .+|+|||+|+.....        ....+..+++|+.++.++++++...   .+.+++|++||..+.......       
T Consensus        76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~-------  148 (260)
T PRK06523         76 GGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPES-------  148 (260)
T ss_pred             CCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCC-------
Confidence             579999999853211        1112377889999998887665432   145689999997532110000       


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-cccc--cc------cc-
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YLKG--AA------EM-  232 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~~~--~~------~~-  232 (294)
                               .      ..|+.+|.+.+.+.+.++.+   .++++++++||.+.++....... +.+.  ..      .+ 
T Consensus       149 ---------~------~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (260)
T PRK06523        149 ---------T------TAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIM  213 (260)
T ss_pred             ---------c------chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHH
Confidence                     1      67999999999999988765   37999999999998875311000 0000  00      00 


Q ss_pred             --cC-CCccccccHHHHHHHHHhhhcCc--CCCCe-EEeecc
Q 043792          233 --YE-DGVMASVDLRFYVDAHICVFEDV--SSYGR-YLCFNH  268 (294)
Q Consensus       233 --~~-~~~~~~v~v~D~a~~i~~~~~~~--~~~~~-~~~~~~  268 (294)
                        .. .....+..++|+|++++.++...  ...|+ +.+.++
T Consensus       214 ~~~~~~p~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg  255 (260)
T PRK06523        214 DSLGGIPLGRPAEPEEVAELIAFLASDRAASITGTEYVIDGG  255 (260)
T ss_pred             HHhccCccCCCCCHHHHHHHHHHHhCcccccccCceEEecCC
Confidence              00 01112678899999999998653  33455 445443

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.86  E-value=6.7e-20  Score=151.73  Aligned_cols=212  Identities=14%  Similarity=0.040  Sum_probs=146.0

Q ss_pred             EEEeCCCchHHHHHHHHHHHCCCeEEEEecCC-CChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc-------CC
Q 043792           29 VCVMDASGHFASALVRRLLLRGYTVHAALHNH-GKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG-------CS  100 (294)
Q Consensus        29 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-------~d  100 (294)
                      |+|||++|+||+++++.|+++|++|++++|+. +..+.+...  ......++.++.+|++|.+++.+++.+       +|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEE--LKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPID   78 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHH--HHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            58999999999999999999999999999875 222233221  222234688999999999988877653       69


Q ss_pred             EEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCC
Q 043792          101 GLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNW  171 (294)
Q Consensus       101 ~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~  171 (294)
                      +|||+++......      ...+..+++|+.++.++++++.+.   .+.++||++||.++. ++...    .        
T Consensus        79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~-~g~~~----~--------  145 (239)
T TIGR01830        79 ILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGL-MGNAG----Q--------  145 (239)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCcccc-CCCCC----C--------
Confidence            9999998754321      112377889999999999988653   255799999997532 33221    1        


Q ss_pred             CChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCC-CccccccHHHHH
Q 043792          172 SDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYED-GVMASVDLRFYV  247 (294)
Q Consensus       172 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~-~~~~~v~v~D~a  247 (294)
                                ..|+.+|.+.+.+.+.++.+   .+++++++||+.+.++..........  ...... ....+.+++|++
T Consensus       146 ----------~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~a  213 (239)
T TIGR01830       146 ----------ANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLSEKVK--KKILSQIPLGRFGTPEEVA  213 (239)
T ss_pred             ----------chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcChHHH--HHHHhcCCcCCCcCHHHHH
Confidence                      67999999999988887765   48999999999886654211110000  000111 111277899999


Q ss_pred             HHHHhhhcCc--CCCCe-EEeec
Q 043792          248 DAHICVFEDV--SSYGR-YLCFN  267 (294)
Q Consensus       248 ~~i~~~~~~~--~~~~~-~~~~~  267 (294)
                      ++++.++...  ...|+ |++.+
T Consensus       214 ~~~~~~~~~~~~~~~g~~~~~~~  236 (239)
T TIGR01830       214 NAVAFLASDEASYITGQVIHVDG  236 (239)
T ss_pred             HHHHHHhCcccCCcCCCEEEeCC
Confidence            9999888543  22454 44443

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.86  E-value=7.1e-20  Score=153.92  Aligned_cols=216  Identities=13%  Similarity=0.013  Sum_probs=149.8

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++++||||+|+||+++++.|+++|++|++++|+.+..+.+.+.     ...++.++.+|++|.+++.++++      
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQR-----FGDHVLVVEGDVTSYADNQRAVDQTVDAF   78 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-----hCCcceEEEccCCCHHHHHHHHHHHHHhc
Confidence            4568999999999999999999999999999999987665555442     12357889999999988877764      


Q ss_pred             -cCCEEEecCCCCCCC-----Ccc------hhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDH-----STY------DELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDNPTS  163 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~-----~~~------~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~  163 (294)
                       .+|++||+|+.....     ...      .++.+++|+.++..+++++...  ..-.++|++||..++......     
T Consensus        79 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~-----  153 (263)
T PRK06200         79 GKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGGG-----  153 (263)
T ss_pred             CCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCC-----
Confidence             479999999864311     111      1256789999999988887643  122589999997643221111     


Q ss_pred             CCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc--CCeEEEEecCceeCCCCCCCCc-----cccccc---ccc
Q 043792          164 HDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR--GISMVSINGGLVMGPDVTISNP-----YLKGAA---EMY  233 (294)
Q Consensus       164 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ilrp~~i~G~~~~~~~~-----~~~~~~---~~~  233 (294)
                                        ..|+.+|.+.+.+.+.++.+.  ++++.++.||.+..+.......     .....+   ...
T Consensus       154 ------------------~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~  215 (263)
T PRK06200        154 ------------------PLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMI  215 (263)
T ss_pred             ------------------chhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHh
Confidence                              579999999999999988764  5999999999997664211100     000000   001


Q ss_pred             CC--CccccccHHHHHHHHHhhhcCc-C--CCCeEEeec
Q 043792          234 ED--GVMASVDLRFYVDAHICVFEDV-S--SYGRYLCFN  267 (294)
Q Consensus       234 ~~--~~~~~v~v~D~a~~i~~~~~~~-~--~~~~~~~~~  267 (294)
                      ..  ....+...+|+|.+++.++... .  .+|+.+..+
T Consensus       216 ~~~~p~~r~~~~~eva~~~~fl~s~~~~~~itG~~i~vd  254 (263)
T PRK06200        216 AAITPLQFAPQPEDHTGPYVLLASRRNSRALTGVVINAD  254 (263)
T ss_pred             hcCCCCCCCCCHHHHhhhhhheecccccCcccceEEEEc
Confidence            00  1112788999999999988644 2  355544333

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.86  E-value=1e-19  Score=152.09  Aligned_cols=212  Identities=10%  Similarity=-0.006  Sum_probs=148.2

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++++||||+|.||++++++|+++|++|++++++..  ....+.  ......++..+.+|++|.+++.++++      
T Consensus         8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~--~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (253)
T PRK08993          8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQ--VTALGRRFLSLTADLRKIDGIPALLERAVAEF   83 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHH--HHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            45689999999999999999999999999998877542  222221  21223467889999999988888775      


Q ss_pred             -cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---CC-CcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---NT-VDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                       ++|++||||+......      ...++.+++|+.++.++++++...   ++ -.++|++||..+..... .    .   
T Consensus        84 ~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-~----~---  155 (253)
T PRK08993         84 GHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGI-R----V---  155 (253)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCC-C----C---
Confidence             4799999998753221      122388999999999999887543   12 25899999975322111 1    1   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccc------cccCCCc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAA------EMYEDGV  237 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~------~~~~~~~  237 (294)
                                     ..|+.+|.+.+.+.+.++.+   +|+++..++||.+-.+....   +.....      ...+.+ 
T Consensus       156 ---------------~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~---~~~~~~~~~~~~~~~p~~-  216 (253)
T PRK08993        156 ---------------PSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQ---LRADEQRSAEILDRIPAG-  216 (253)
T ss_pred             ---------------cchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhh---hccchHHHHHHHhcCCCC-
Confidence                           56999999999999988776   48999999999997664211   111000      111111 


Q ss_pred             cccccHHHHHHHHHhhhcCc--CCCCeEEeec
Q 043792          238 MASVDLRFYVDAHICVFEDV--SSYGRYLCFN  267 (294)
Q Consensus       238 ~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~  267 (294)
                       .|...+|+|+.++.++...  ...|+.+..+
T Consensus       217 -r~~~p~eva~~~~~l~s~~~~~~~G~~~~~d  247 (253)
T PRK08993        217 -RWGLPSDLMGPVVFLASSASDYINGYTIAVD  247 (253)
T ss_pred             -CCcCHHHHHHHHHHHhCccccCccCcEEEEC
Confidence             2778899999999998754  2355544433

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.86  E-value=4.2e-20  Score=155.24  Aligned_cols=220  Identities=14%  Similarity=0.077  Sum_probs=149.8

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .+++++|||||+|.||+++++.|+++|++|++++|+.++.+.+.+++.. ....++.++.+|++|++++.++++      
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g   84 (263)
T PRK08339          6 LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKS-ESNVDVSYIVADLTKREDLERTVKELKNIG   84 (263)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-hcCCceEEEEecCCCHHHHHHHHHHHHhhC
Confidence            3568999999999999999999999999999999987665555443211 113468899999999998887775      


Q ss_pred             cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           98 GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                      .+|++||+++......      ...+..+++|+.+...+.+++...   ++..++|++||..+.. +...    .     
T Consensus        85 ~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~-~~~~----~-----  154 (263)
T PRK08339         85 EPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKE-PIPN----I-----  154 (263)
T ss_pred             CCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccC-CCCc----c-----
Confidence            4799999998643221      112377899988877766655432   2557999999975321 1111    1     


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCC--Ccc-cccc--c----cccCC-
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTIS--NPY-LKGA--A----EMYED-  235 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~--~~~-~~~~--~----~~~~~-  235 (294)
                                   ..|+.+|.+.+.+.+.++.+.   |+++.++.||.+..+.....  ... ..+.  .    ..... 
T Consensus       155 -------------~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (263)
T PRK08339        155 -------------ALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPI  221 (263)
T ss_pred             -------------hhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccC
Confidence                         569999999999999988764   79999999999976531100  000 0000  0    00000 


Q ss_pred             CccccccHHHHHHHHHhhhcCc--CCCCeEEeec
Q 043792          236 GVMASVDLRFYVDAHICVFEDV--SSYGRYLCFN  267 (294)
Q Consensus       236 ~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~  267 (294)
                      ....+..++|+|.+++.++...  ..+|+.+..+
T Consensus       222 p~~r~~~p~dva~~v~fL~s~~~~~itG~~~~vd  255 (263)
T PRK08339        222 PLGRLGEPEEIGYLVAFLASDLGSYINGAMIPVD  255 (263)
T ss_pred             CcccCcCHHHHHHHHHHHhcchhcCccCceEEEC
Confidence            1112778999999999988653  3356654443

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.86  E-value=3e-20  Score=153.02  Aligned_cols=209  Identities=16%  Similarity=0.115  Sum_probs=148.5

Q ss_pred             EEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc---CCEEEecC
Q 043792           30 CVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG---CSGLFYSF  106 (294)
Q Consensus        30 lItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~---~d~Vih~a  106 (294)
                      +||||+|+||+++++.|+++|++|++++|+.+..+.+.+++   ....++.++.+|++|.+++.++++.   +|++||++
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~a   77 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARAL---GGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITA   77 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---hcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECC
Confidence            59999999999999999999999999999865544443321   1234688999999999999988874   79999999


Q ss_pred             CCCCCCC------cchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhc
Q 043792          107 EPPSDHS------TYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKF  180 (294)
Q Consensus       107 ~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~  180 (294)
                      +......      ...++.+++|+.++.+++++.... +.+++|++||.+++......                      
T Consensus        78 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~g~iv~~ss~~~~~~~~~~----------------------  134 (230)
T PRK07041         78 ADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIA-PGGSLTFVSGFAAVRPSASG----------------------  134 (230)
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhc-CCeEEEEECchhhcCCCCcc----------------------
Confidence            8644321      112378999999999999966555 56799999998632211111                      


Q ss_pred             cchhHhhHHHHHHHHHHHHHhc-CCeEEEEecCceeCCCCCCCCc-----cccccccccCCCccccccHHHHHHHHHhhh
Q 043792          181 KLWHGLSKTLAEKTAWALAMDR-GISMVSINGGLVMGPDVTISNP-----YLKGAAEMYEDGVMASVDLRFYVDAHICVF  254 (294)
Q Consensus       181 ~~~Y~~sK~~~e~~~~~~~~~~-~~~~~ilrp~~i~G~~~~~~~~-----~~~~~~~~~~~~~~~~v~v~D~a~~i~~~~  254 (294)
                       +.|+.+|.+.+.+.+.++.+. ++++++++|+.+.++.......     ..+......+  ...+...+|+|++++.++
T Consensus       135 -~~Y~~sK~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~dva~~~~~l~  211 (230)
T PRK07041        135 -VLQGAINAALEALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLP--ARRVGQPEDVANAILFLA  211 (230)
T ss_pred             -hHHHHHHHHHHHHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCC--CCCCcCHHHHHHHHHHHh
Confidence             679999999999999988764 5899999999886654211000     0000000011  112567899999999999


Q ss_pred             cCcCCCCe-EEeec
Q 043792          255 EDVSSYGR-YLCFN  267 (294)
Q Consensus       255 ~~~~~~~~-~~~~~  267 (294)
                      ......|+ |.+.+
T Consensus       212 ~~~~~~G~~~~v~g  225 (230)
T PRK07041        212 ANGFTTGSTVLVDG  225 (230)
T ss_pred             cCCCcCCcEEEeCC
Confidence            87655565 55544

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.85  E-value=9.8e-20  Score=150.60  Aligned_cols=204  Identities=12%  Similarity=0.101  Sum_probs=141.5

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChh-hHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQ-CIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------   97 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------   97 (294)
                      ++++|||||+|+||+++++.|+++|++|++++|++++.. .+..        .++.++.+|+.|.+++.++++       
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~--------~~~~~~~~D~~~~~~~~~~~~~~~~~~~   73 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQ--------AGAQCIQADFSTNAGIMAFIDELKQHTD   73 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH--------cCCEEEEcCCCCHHHHHHHHHHHHhhCC
Confidence            579999999999999999999999999999999865432 2211        246789999999988877664       


Q ss_pred             cCCEEEecCCCCCCC--C----cchhhhHhHhhHHHHHHHHHHHhc---CC--CcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 GCSGLFYSFEPPSDH--S----TYDELTAEVETMAAHNVLEACAQT---NT--VDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~--~----~~~~~~~~~n~~~~~~ll~~~~~~---~~--~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                      .+|++||+++.....  .    ...++.+++|+.++..+.+++.+.   .+  ..++|++||..+.. +...    .   
T Consensus        74 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~-~~~~----~---  145 (236)
T PRK06483         74 GLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEK-GSDK----H---  145 (236)
T ss_pred             CccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhcc-CCCC----C---
Confidence            379999999863221  1    112378899999988877766543   12  35899999864211 1111    1   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc--CCeEEEEecCceeCCCCCCCCccccccccccCCC-ccccccH
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR--GISMVSINGGLVMGPDVTISNPYLKGAAEMYEDG-VMASVDL  243 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~-~~~~v~v  243 (294)
                                     ..|+.+|.+.+.+++.++.+.  ++++.+++||.+...... .....+   ...... ...+...
T Consensus       146 ---------------~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~  206 (236)
T PRK06483        146 ---------------IAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGD-DAAYRQ---KALAKSLLKIEPGE  206 (236)
T ss_pred             ---------------ccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCC-CHHHHH---HHhccCccccCCCH
Confidence                           679999999999999998875  599999999998533211 010100   001011 1115678


Q ss_pred             HHHHHHHHhhhcCcCCCCeEE
Q 043792          244 RFYVDAHICVFEDVSSYGRYL  264 (294)
Q Consensus       244 ~D~a~~i~~~~~~~~~~~~~~  264 (294)
                      +|+|+++..++......|+.+
T Consensus       207 ~~va~~~~~l~~~~~~~G~~i  227 (236)
T PRK06483        207 EEIIDLVDYLLTSCYVTGRSL  227 (236)
T ss_pred             HHHHHHHHHHhcCCCcCCcEE
Confidence            999999999997555566643

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=1e-19  Score=151.90  Aligned_cols=215  Identities=14%  Similarity=0.063  Sum_probs=148.1

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------   97 (294)
                      ++++++||||+|+||+.+++.|+++|++|++++|+..+.+...++  ......++.++.+|+++.+++.++++       
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAE--CGALGTEVRGYAANVTDEEDVEATFAQIAEDFG   81 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH--HHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999999999999999987554444332  12224568889999999988776654       


Q ss_pred             cCCEEEecCCCCCCC------------C---cchhhhHhHhhHHHHHHHHHHHhc----CCCcEEEEecCcceeeeCCCC
Q 043792           98 GCSGLFYSFEPPSDH------------S---TYDELTAEVETMAAHNVLEACAQT----NTVDKVVFTSSLTAVVWNNHR  158 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~------------~---~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~v~~Ss~~~~~~~~~~  158 (294)
                      .+|+|||+++.....            .   ......+++|+.++.++.+++...    ..-.++|++||.+  .++...
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~--~~~~~~  159 (253)
T PRK08217         82 QLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA--RAGNMG  159 (253)
T ss_pred             CCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc--ccCCCC
Confidence            369999999853321            0   111267789999998777654432    1224788998864  333211


Q ss_pred             CCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-cccccccccC
Q 043792          159 DNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YLKGAAEMYE  234 (294)
Q Consensus       159 ~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~~~~  234 (294)
                          .                  ..|+.+|.+.+.+++.++.+   .+++++.++|+.+.++....... ..+....  .
T Consensus       160 ----~------------------~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~--~  215 (253)
T PRK08217        160 ----Q------------------TNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEALERLEK--M  215 (253)
T ss_pred             ----C------------------chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHHHHHHHHh--c
Confidence                1                  67999999999999988765   48999999999998775321110 0000000  0


Q ss_pred             CCccccccHHHHHHHHHhhhcCcCCCCe-EEeec
Q 043792          235 DGVMASVDLRFYVDAHICVFEDVSSYGR-YLCFN  267 (294)
Q Consensus       235 ~~~~~~v~v~D~a~~i~~~~~~~~~~~~-~~~~~  267 (294)
                      .....+.+++|+|+++..++......|+ +.+.+
T Consensus       216 ~~~~~~~~~~~~a~~~~~l~~~~~~~g~~~~~~g  249 (253)
T PRK08217        216 IPVGRLGEPEEIAHTVRFIIENDYVTGRVLEIDG  249 (253)
T ss_pred             CCcCCCcCHHHHHHHHHHHHcCCCcCCcEEEeCC
Confidence            1112277899999999999876544665 44443

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.85  E-value=8e-20  Score=157.23  Aligned_cols=231  Identities=14%  Similarity=0.009  Sum_probs=151.3

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++++++||||+|+||.++++.|+++|++|+++.|+.++.+...+++.......++.++.+|+.|.++++++++     
T Consensus        11 ~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~   90 (313)
T PRK05854         11 DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAE   90 (313)
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence            345789999999999999999999999999999999877655544433222223468899999999998887764     


Q ss_pred             --cCCEEEecCCCCCCCC-----cchhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS-----TYDELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~-----~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                        .+|++|||||......     ...+..+.+|+.+...+.+.+...  .+..++|++||.... ++...    ...+.+
T Consensus        91 ~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~-~~~~~----~~~~~~  165 (313)
T PRK05854         91 GRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAAR-RGAIN----WDDLNW  165 (313)
T ss_pred             CCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhc-CCCcC----cccccc
Confidence              3799999998754221     222478999999988888776632  133589999998632 22111    112222


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHh-----cCCeEEEEecCceeCCCCCCCCccccccc----ccc---CCC
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD-----RGISMVSINGGLVMGPDVTISNPYLKGAA----EMY---EDG  236 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~ilrp~~i~G~~~~~~~~~~~~~~----~~~---~~~  236 (294)
                      +....+.      ..|+.||.+.+.+.+.++.+     .++.+.++.||.+..+..........+..    .+.   ...
T Consensus       166 ~~~~~~~------~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (313)
T PRK05854        166 ERSYAGM------RAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSAR  239 (313)
T ss_pred             cccCcch------hhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHhhc
Confidence            2222222      67999999999999988754     37999999999996554211100000000    000   000


Q ss_pred             ccccccHHHHHHHHHhhhcCcCC-CCeEE
Q 043792          237 VMASVDLRFYVDAHICVFEDVSS-YGRYL  264 (294)
Q Consensus       237 ~~~~v~v~D~a~~i~~~~~~~~~-~~~~~  264 (294)
                      ...+..+++.|...+.++..+.. +|.|+
T Consensus       240 ~~~~~~~~~ga~~~l~~a~~~~~~~g~~~  268 (313)
T PRK05854        240 GFLVGTVESAILPALYAATSPDAEGGAFY  268 (313)
T ss_pred             ccccCCHHHHHHHhhheeeCCCCCCCcEE
Confidence            11134677788888777765443 45554

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=3.1e-19  Score=149.40  Aligned_cols=214  Identities=14%  Similarity=0.041  Sum_probs=145.2

Q ss_pred             CCCeEEEeCCCc--hHHHHHHHHHHHCCCeEEEEecCCC-----------ChhhHHHHHhhccCCCCeEEEECCCCChhH
Q 043792           25 ATKTVCVMDASG--HFASALVRRLLLRGYTVHAALHNHG-----------KLQCIEEELINYNEEKKLKVFQADPFDYHS   91 (294)
Q Consensus        25 ~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~-----------~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~   91 (294)
                      ++++||||||+|  .||+++++.|+++|++|++++|++.           ....+..+  ......++.++.+|+++.++
T Consensus         4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~~   81 (256)
T PRK12748          4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEE--IESYGVRCEHMEIDLSQPYA   81 (256)
T ss_pred             CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHH--HHhcCCeEEEEECCCCCHHH
Confidence            468899999995  6999999999999999999998721           11112221  11223468899999999988


Q ss_pred             HHHHhc-------cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeC
Q 043792           92 LVNALK-------GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWN  155 (294)
Q Consensus        92 ~~~~~~-------~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~  155 (294)
                      +..+++       .+|+|||+|+.......      ..+..+++|+.++.++++++.+.   .+.+++|++||..++...
T Consensus        82 ~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~  161 (256)
T PRK12748         82 PNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPM  161 (256)
T ss_pred             HHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCC
Confidence            877664       36999999986432211      12367899999999999987643   134689999997532111


Q ss_pred             CCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccc
Q 043792          156 NHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEM  232 (294)
Q Consensus       156 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~  232 (294)
                      . .    .                  ..|+.+|.+.+.+++.++.+   .+++++.++||.+..+.... . ..+.....
T Consensus       162 ~-~----~------------------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~-~-~~~~~~~~  216 (256)
T PRK12748        162 P-D----E------------------LAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE-E-LKHHLVPK  216 (256)
T ss_pred             C-C----c------------------hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh-h-HHHhhhcc
Confidence            1 1    1                  67999999999999988765   48999999999887654211 0 10000011


Q ss_pred             cCCCccccccHHHHHHHHHhhhcCcC--CCCeEEeec
Q 043792          233 YEDGVMASVDLRFYVDAHICVFEDVS--SYGRYLCFN  267 (294)
Q Consensus       233 ~~~~~~~~v~v~D~a~~i~~~~~~~~--~~~~~~~~~  267 (294)
                      .+..  .+...+|+|+++.+++....  ..|+++..+
T Consensus       217 ~~~~--~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d  251 (256)
T PRK12748        217 FPQG--RVGEPVDAARLIAFLVSEEAKWITGQVIHSE  251 (256)
T ss_pred             CCCC--CCcCHHHHHHHHHHHhCcccccccCCEEEec
Confidence            1111  15567999999998886533  346654433

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=2.7e-19  Score=149.68  Aligned_cols=213  Identities=10%  Similarity=0.013  Sum_probs=143.9

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC-hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK-LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..+|+++||||+|+||+++++.|+++|++|+++.++... .+.+..        .++.++.+|++|++++.++++     
T Consensus         5 l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~--------~~~~~~~~Dl~~~~~~~~~~~~~~~~   76 (255)
T PRK06463          5 FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELRE--------KGVFTIKCDVGNRDQVKKSKEVVEKE   76 (255)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHh--------CCCeEEEecCCCHHHHHHHHHHHHHH
Confidence            346899999999999999999999999999988765432 222222        157889999999998887765     


Q ss_pred             --cCCEEEecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHH----HhcCCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS----T--YDELTAEVETMAAHNVLEAC----AQTNTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                        ++|+||||++......    .  ..+..+++|+.++..+.+++    ++. +..++|++||..++......    .  
T Consensus        77 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~g~iv~isS~~~~~~~~~~----~--  149 (255)
T PRK06463         77 FGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLS-KNGAIVNIASNAGIGTAAEG----T--  149 (255)
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcCHHhCCCCCCC----c--
Confidence              4799999998743211    1  12377899999976665554    334 45699999997532111101    1  


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccc----cccC-CCc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAA----EMYE-DGV  237 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~----~~~~-~~~  237 (294)
                                      ..|+.+|.+.+.+.+.++.+   .++++++++||.+-.+....... .....    .... ...
T Consensus       150 ----------------~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~  212 (255)
T PRK06463        150 ----------------TFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKS-QEEAEKLRELFRNKTVL  212 (255)
T ss_pred             ----------------cHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccC-ccchHHHHHHHHhCCCc
Confidence                            67999999999999998866   48999999999986553211000 00000    0000 111


Q ss_pred             cccccHHHHHHHHHhhhcCcC--CCCeE-Eeecc
Q 043792          238 MASVDLRFYVDAHICVFEDVS--SYGRY-LCFNH  268 (294)
Q Consensus       238 ~~~v~v~D~a~~i~~~~~~~~--~~~~~-~~~~~  268 (294)
                      ..+..++|+|++++.++....  ..|.. .+.++
T Consensus       213 ~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg  246 (255)
T PRK06463        213 KTTGKPEDIANIVLFLASDDARYITGQVIVADGG  246 (255)
T ss_pred             CCCcCHHHHHHHHHHHcChhhcCCCCCEEEECCC
Confidence            226789999999999986543  35654 44443

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.85  E-value=1.4e-19  Score=150.37  Aligned_cols=202  Identities=18%  Similarity=0.092  Sum_probs=140.5

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC-hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK-LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------   97 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------   97 (294)
                      +++|+||||+|+||+++++.|+++|++|++++|+... ...+...  ......++.++.+|+.|.+++.++++       
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   79 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEE--YGFTEDQVRLKELDVTDTEECAEALAEIEEEEG   79 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHH--hhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999988541 1112110  11223468899999999998877765       


Q ss_pred             cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHH----HhcCCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEAC----AQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                      .+|+|||+++......      ...+..+++|+.++.++.+++    ++. +.++||++||..+.. +...    .    
T Consensus        80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~iss~~~~~-~~~~----~----  149 (245)
T PRK12824         80 PVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ-GYGRIINISSVNGLK-GQFG----Q----  149 (245)
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-CCeEEEEECChhhcc-CCCC----C----
Confidence            4799999998643211      112377889999998886654    444 567999999975321 1111    1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCcccccccccc-C-CCcccccc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMY-E-DGVMASVD  242 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~-~-~~~~~~v~  242 (294)
                                    ..|+.+|.+.+.+++.++.+   .++++++++|+.+.++......   ......+ . .....+..
T Consensus       150 --------------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~---~~~~~~~~~~~~~~~~~~  212 (245)
T PRK12824        150 --------------TNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMG---PEVLQSIVNQIPMKRLGT  212 (245)
T ss_pred             --------------hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcC---HHHHHHHHhcCCCCCCCC
Confidence                          57999999999888888754   4899999999999877522111   0000000 0 11122677


Q ss_pred             HHHHHHHHHhhhcC
Q 043792          243 LRFYVDAHICVFED  256 (294)
Q Consensus       243 v~D~a~~i~~~~~~  256 (294)
                      ++|+++++..++..
T Consensus       213 ~~~va~~~~~l~~~  226 (245)
T PRK12824        213 PEEIAAAVAFLVSE  226 (245)
T ss_pred             HHHHHHHHHHHcCc
Confidence            89999999888854

>TIGR02415 23BDH acetoin reductases

Probab=99.85  E-value=1.1e-19  Score=151.83  Aligned_cols=216  Identities=14%  Similarity=0.087  Sum_probs=147.9

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------cC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------GC   99 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~   99 (294)
                      ++++||||+|+||.++++.|+++|++|+++.|+.+..+.+..++  .....++.++.+|++|++++.++++       .+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l--~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   78 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEI--NQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGF   78 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            47999999999999999999999999999999865544443321  2234468899999999998877764       46


Q ss_pred             CEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc----CCCcEEEEecCcceeeeCCCCCCCCCCCCCCC
Q 043792          100 SGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT----NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDER  169 (294)
Q Consensus       100 d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~  169 (294)
                      |+|||+++......      ...+..+++|+.++..+++++.+.    +..+++|++||..+. ++...    .      
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-~~~~~----~------  147 (254)
T TIGR02415        79 DVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGH-EGNPI----L------  147 (254)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhc-CCCCC----C------
Confidence            99999998643211      112377999999998887766542    123689999997532 22211    1      


Q ss_pred             CCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccc-c--ccc------cccC-CC
Q 043792          170 NWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYL-K--GAA------EMYE-DG  236 (294)
Q Consensus       170 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~-~--~~~------~~~~-~~  236 (294)
                                  ..|+.+|.+.+.+++.++.+.   ++++++++||.+..+......... +  +.+      .... ..
T Consensus       148 ------------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (254)
T TIGR02415       148 ------------SAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIA  215 (254)
T ss_pred             ------------cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCC
Confidence                        679999999999998887664   799999999998665421100000 0  000      0000 01


Q ss_pred             ccccccHHHHHHHHHhhhcCcCC--CCeEEeec
Q 043792          237 VMASVDLRFYVDAHICVFEDVSS--YGRYLCFN  267 (294)
Q Consensus       237 ~~~~v~v~D~a~~i~~~~~~~~~--~~~~~~~~  267 (294)
                      ...+..++|+++++..++.....  .|.++..+
T Consensus       216 ~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d  248 (254)
T TIGR02415       216 LGRPSEPEDVAGLVSFLASEDSDYITGQSILVD  248 (254)
T ss_pred             CCCCCCHHHHHHHHHhhcccccCCccCcEEEec
Confidence            11278899999999999976532  45655443

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.85  E-value=4.1e-19  Score=149.23  Aligned_cols=217  Identities=15%  Similarity=0.067  Sum_probs=148.9

Q ss_pred             CCCCeEEEeCCCc-hHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           24 NATKTVCVMDASG-HFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        24 ~~~~~vlItGatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      .++++++||||+| .||+.+++.|+++|++|++++|+.++.+...+++.......++.++.+|+++++++.++++     
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   94 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER   94 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3468999999997 6999999999999999999998876555444322111112368889999999988877764     


Q ss_pred             --cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---CC-CcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---NT-VDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                        .+|+||||++......      ....+.+++|+.++..+++++.+.   .+ -.++|++||..........       
T Consensus        95 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~-------  167 (262)
T PRK07831         95 LGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQ-------  167 (262)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCC-------
Confidence              4799999998643211      111267889999999988886543   12 4589998886422111111       


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc--cccccccccCCCcccc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP--YLKGAAEMYEDGVMAS  240 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~--~~~~~~~~~~~~~~~~  240 (294)
                                      ..|+.+|.+.+.+.+.++.+   +++++.+++||.+..+.......  ..+....  ......+
T Consensus       168 ----------------~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~--~~~~~r~  229 (262)
T PRK07831        168 ----------------AHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDELAA--REAFGRA  229 (262)
T ss_pred             ----------------cchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHHHHh--cCCCCCC
Confidence                            67999999999999999876   58999999999998875321100  0000000  0111227


Q ss_pred             ccHHHHHHHHHhhhcCcC--CCCeEEe
Q 043792          241 VDLRFYVDAHICVFEDVS--SYGRYLC  265 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~~--~~~~~~~  265 (294)
                      ...+|+|++++.++....  ..|+.+.
T Consensus       230 ~~p~~va~~~~~l~s~~~~~itG~~i~  256 (262)
T PRK07831        230 AEPWEVANVIAFLASDYSSYLTGEVVS  256 (262)
T ss_pred             cCHHHHHHHHHHHcCchhcCcCCceEE
Confidence            778999999999887542  3555443

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.85  E-value=2.7e-19  Score=167.95  Aligned_cols=220  Identities=16%  Similarity=0.124  Sum_probs=149.3

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      +..+++||||||+|+||++++++|+++|++|++++|+.+..+.+.+.+........+..+.+|++|.+++.++++     
T Consensus       411 ~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~  490 (676)
T TIGR02632       411 TLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALA  490 (676)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            445789999999999999999999999999999999876655544422111122357788999999999888876     


Q ss_pred             --cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                        ++|+|||||+.......      ..+..+++|+.+...+.+++.    +.+.-.++|++||..++..+...       
T Consensus       491 ~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~-------  563 (676)
T TIGR02632       491 YGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNA-------  563 (676)
T ss_pred             cCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCC-------
Confidence              57999999987543211      113678899988877765543    33112589999997543222111       


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCcee-CCCCCCCC----ccc-cccc-----c
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVM-GPDVTISN----PYL-KGAA-----E  231 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~-G~~~~~~~----~~~-~~~~-----~  231 (294)
                                      ..|+.+|.+.+.+++.++.+   .|+++++++|+.|+ |.......    ... .+..     .
T Consensus       564 ----------------~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~  627 (676)
T TIGR02632       564 ----------------SAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEE  627 (676)
T ss_pred             ----------------HHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHH
Confidence                            68999999999999998876   37999999999987 33221110    000 0000     1


Q ss_pred             ccC--CCccccccHHHHHHHHHhhhcCc--CCCCeEEe
Q 043792          232 MYE--DGVMASVDLRFYVDAHICVFEDV--SSYGRYLC  265 (294)
Q Consensus       232 ~~~--~~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~  265 (294)
                      .+.  .....+++++|+|+++..++...  ..+|.++.
T Consensus       628 ~~~~r~~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~  665 (676)
T TIGR02632       628 HYAKRTLLKRHIFPADIAEAVFFLASSKSEKTTGCIIT  665 (676)
T ss_pred             HHHhcCCcCCCcCHHHHHHHHHHHhCCcccCCcCcEEE
Confidence            111  11123789999999999887643  33466443

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.85  E-value=3.8e-19  Score=151.21  Aligned_cols=216  Identities=13%  Similarity=0.041  Sum_probs=146.5

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC---------CChhhHHHHHhhccCCCCeEEEECCCCChhHHH
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNH---------GKLQCIEEELINYNEEKKLKVFQADPFDYHSLV   93 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~   93 (294)
                      ..++++++||||++.||+.+++.|+++|++|++++|+.         +..+.+.+++  .....++.++.+|++|.+++.
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~Dv~~~~~v~   80 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEI--VAAGGEAVANGDDIADWDGAA   80 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHH--HhcCCceEEEeCCCCCHHHHH
Confidence            34578999999999999999999999999999988765         3333333322  122346788899999998887


Q ss_pred             HHhc-------cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc----C--C---CcEEEEecCcce
Q 043792           94 NALK-------GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT----N--T---VDKVVFTSSLTA  151 (294)
Q Consensus        94 ~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~----~--~---~~~~v~~Ss~~~  151 (294)
                      ++++       .+|++||||+......      ...+..+++|+.++..+++++...    .  +   -.+||++||.++
T Consensus        81 ~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~  160 (286)
T PRK07791         81 NLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAG  160 (286)
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhh
Confidence            7664       4799999998744221      112378999999999888876532    0  1   248999999764


Q ss_pred             eeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccc
Q 043792          152 VVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKG  228 (294)
Q Consensus       152 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~  228 (294)
                      .. +...    .                  ..|+.+|.+.+.+.+.++.+   +|+++++|.|+ +..+.   .......
T Consensus       161 ~~-~~~~----~------------------~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~---~~~~~~~  213 (286)
T PRK07791        161 LQ-GSVG----Q------------------GNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRM---TETVFAE  213 (286)
T ss_pred             Cc-CCCC----c------------------hhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCc---chhhHHH
Confidence            32 2111    1                  67999999999999988776   58999999998 43222   1101110


Q ss_pred             cccccCCCccccccHHHHHHHHHhhhcCc--CCCCeEEeec
Q 043792          229 AAEMYEDGVMASVDLRFYVDAHICVFEDV--SSYGRYLCFN  267 (294)
Q Consensus       229 ~~~~~~~~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~  267 (294)
                      .....+.+.+.+...+|+|+++++++...  ..+|+++..+
T Consensus       214 ~~~~~~~~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vd  254 (286)
T PRK07791        214 MMAKPEEGEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVE  254 (286)
T ss_pred             HHhcCcccccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEc
Confidence            00011112223568999999999988643  3466654433

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.84  E-value=8.1e-20  Score=152.46  Aligned_cols=209  Identities=16%  Similarity=0.078  Sum_probs=140.4

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC-ChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccC-----
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG-KLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGC-----   99 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~-----   99 (294)
                      ||+|+||||+|+||++++++|+++|++|++++|+.. ....+.+     ....++.++.+|++|++++.++++++     
T Consensus         1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   75 (251)
T PRK06924          1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAE-----QYNSNLTFHSLDLQDVHELETNFNEILSSIQ   75 (251)
T ss_pred             CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHh-----ccCCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            478999999999999999999999999999999763 2222222     12346889999999999988877532     


Q ss_pred             ----C--EEEecCCCCCCC-------CcchhhhHhHhhHHHHHHHHHHHhc----CCCcEEEEecCcceeeeCCCCCCCC
Q 043792          100 ----S--GLFYSFEPPSDH-------STYDELTAEVETMAAHNVLEACAQT----NTVDKVVFTSSLTAVVWNNHRDNPT  162 (294)
Q Consensus       100 ----d--~Vih~a~~~~~~-------~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~  162 (294)
                          +  ++||++|.....       .......+++|+.+...+++.+...    ++.++||++||..+.....      
T Consensus        76 ~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------  149 (251)
T PRK06924         76 EDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYF------  149 (251)
T ss_pred             cccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCC------
Confidence                1  789998764321       1112267888998877666655432    2346899999964211100      


Q ss_pred             CCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh-----cCCeEEEEecCceeCCCCCCCCccccccc-------
Q 043792          163 SHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD-----RGISMVSINGGLVMGPDVTISNPYLKGAA-------  230 (294)
Q Consensus       163 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~ilrp~~i~G~~~~~~~~~~~~~~-------  230 (294)
                                 +.      ..|+.+|.+.+.+++.++.+     .++++.+++||.+-.+.............       
T Consensus       150 -----------~~------~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  212 (251)
T PRK06924        150 -----------GW------SAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFI  212 (251)
T ss_pred             -----------Cc------HHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHH
Confidence                       01      67999999999999988765     36999999999886543110000000000       


Q ss_pred             cccCCCccccccHHHHHHHHHhhhcC-cCCCCeEE
Q 043792          231 EMYEDGVMASVDLRFYVDAHICVFED-VSSYGRYL  264 (294)
Q Consensus       231 ~~~~~~~~~~v~v~D~a~~i~~~~~~-~~~~~~~~  264 (294)
                      ...+.+  .+..++|+|+.++.++.. ...+|+++
T Consensus       213 ~~~~~~--~~~~~~dva~~~~~l~~~~~~~~G~~~  245 (251)
T PRK06924        213 TLKEEG--KLLSPEYVAKALRNLLETEDFPNGEVI  245 (251)
T ss_pred             HHhhcC--CcCCHHHHHHHHHHHHhcccCCCCCEe
Confidence            001112  278999999999999876 44456543

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.84  E-value=4e-19  Score=148.43  Aligned_cols=211  Identities=11%  Similarity=0.038  Sum_probs=145.9

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------c
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------G   98 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~   98 (294)
                      +|+++||||+|+||+++++.|+++|++|++++|+.+..+.+.+.+  .....++.++.+|++|++++.++++       .
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEI--EQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGR   78 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            478999999999999999999999999999999876655554422  1123578899999999988877664       4


Q ss_pred             CCEEEecCCCCCCCC----cc--hhhhHhHhhHHHHHHHHHHHhc----CCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           99 CSGLFYSFEPPSDHS----TY--DELTAEVETMAAHNVLEACAQT----NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~----~~--~~~~~~~n~~~~~~ll~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                      +|+|||+++......    +.  .+..+++|+.++.++++++.+.    ....++|++||..+.......          
T Consensus        79 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~----------  148 (252)
T PRK07677         79 IDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGV----------  148 (252)
T ss_pred             ccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCC----------
Confidence            699999998533211    11  1378999999999999988532    123689999987422111111          


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHh----cCCeEEEEecCceeCCCCCCCCccccccc---cccCC-Ccccc
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD----RGISMVSINGGLVMGPDVTISNPYLKGAA---EMYED-GVMAS  240 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~ilrp~~i~G~~~~~~~~~~~~~~---~~~~~-~~~~~  240 (294)
                                   ..|+.+|.+.+.+.+.++.+    +|+++.+++||.+.+....  ..+.....   ..... ....+
T Consensus       149 -------------~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  213 (252)
T PRK07677        149 -------------IHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGA--DKLWESEEAAKRTIQSVPLGRL  213 (252)
T ss_pred             -------------cchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeeccccccccc--ccccCCHHHHHHHhccCCCCCC
Confidence                         56999999999998887665    3799999999999754311  00111000   01111 11127


Q ss_pred             ccHHHHHHHHHhhhcCc--CCCCeE
Q 043792          241 VDLRFYVDAHICVFEDV--SSYGRY  263 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~--~~~~~~  263 (294)
                      ...+|+++++..++...  ...|+.
T Consensus       214 ~~~~~va~~~~~l~~~~~~~~~g~~  238 (252)
T PRK07677        214 GTPEEIAGLAYFLLSDEAAYINGTC  238 (252)
T ss_pred             CCHHHHHHHHHHHcCccccccCCCE
Confidence            78999999998887643  234543

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.84  E-value=1.8e-19  Score=149.99  Aligned_cols=205  Identities=12%  Similarity=0.043  Sum_probs=139.6

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecC-CCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHN-HGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      +++.++||||+|+||+++++.|+++|++|++..++ ........++  ....+..+..+.+|+.|.+++.++++      
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLED--QKALGFDFIASEGNVGDWDSTKAAFDKVKAEV   79 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHH--HHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            35789999999999999999999999999886543 2222222221  22223467788999999988877764      


Q ss_pred             -cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                       ++|+||||++......      ...+..+++|+.++.++++++...   .+.+++|++||..+.. +...    .    
T Consensus        80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-~~~~----~----  150 (246)
T PRK12938         80 GEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK-GQFG----Q----  150 (246)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccC-CCCC----C----
Confidence             5799999998754211      112377899999987776665432   2567999999974221 1111    1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCcccccccc-cc-CCCcccccc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAE-MY-EDGVMASVD  242 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~-~~-~~~~~~~v~  242 (294)
                                    ..|+.+|.+.+.+.+.++.+   .++++++++||.+.++....   ....... .. ......+..
T Consensus       151 --------------~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~---~~~~~~~~~~~~~~~~~~~~  213 (246)
T PRK12938        151 --------------TNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA---IRPDVLEKIVATIPVRRLGS  213 (246)
T ss_pred             --------------hhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhh---cChHHHHHHHhcCCccCCcC
Confidence                          67999999999888887765   47999999999998775321   1000000 00 011122678


Q ss_pred             HHHHHHHHHhhhcCc
Q 043792          243 LRFYVDAHICVFEDV  257 (294)
Q Consensus       243 v~D~a~~i~~~~~~~  257 (294)
                      .+|++.++..++...
T Consensus       214 ~~~v~~~~~~l~~~~  228 (246)
T PRK12938        214 PDEIGSIVAWLASEE  228 (246)
T ss_pred             HHHHHHHHHHHcCcc
Confidence            899999999888653

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.84  E-value=3.2e-19  Score=148.54  Aligned_cols=201  Identities=14%  Similarity=0.040  Sum_probs=141.6

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCC--ChhHHHHHh----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPF--DYHSLVNAL----   96 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~--~~~~~~~~~----   96 (294)
                      ..++++|+||||+|+||.++++.|+++|++|++++|+.++.+.+..++.. ....++.++.+|++  +.+++.+++    
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   87 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEA-AGGPQPAIIPLDLLTATPQNYQQLADTIE   87 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHh-cCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999987665555443211 12335677888885  555544443    


Q ss_pred             ---ccCCEEEecCCCCCCC-------CcchhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCC
Q 043792           97 ---KGCSGLFYSFEPPSDH-------STYDELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPT  162 (294)
Q Consensus        97 ---~~~d~Vih~a~~~~~~-------~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~  162 (294)
                         ..+|+|||+|+.....       .......+++|+.++.++++++.    +. +.++||++||..+.. +...    
T Consensus        88 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~-~~~~iv~~ss~~~~~-~~~~----  161 (247)
T PRK08945         88 EQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKS-PAASLVFTSSSVGRQ-GRAN----  161 (247)
T ss_pred             HHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC-CCCEEEEEccHhhcC-CCCC----
Confidence               3579999999864321       11123789999999888888764    34 567999999975321 1111    


Q ss_pred             CCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccccccCCCccc
Q 043792          163 SHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMA  239 (294)
Q Consensus       163 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~  239 (294)
                      .                  ..|+.+|.+.+.+++.++.+.   ++++++++|+.+-++..   .......      ....
T Consensus       162 ~------------------~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~---~~~~~~~------~~~~  214 (247)
T PRK08945        162 W------------------GAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMR---ASAFPGE------DPQK  214 (247)
T ss_pred             C------------------cccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcch---hhhcCcc------cccC
Confidence            1                  579999999999999887665   69999999998865531   1011111      0112


Q ss_pred             cccHHHHHHHHHhhhcCc
Q 043792          240 SVDLRFYVDAHICVFEDV  257 (294)
Q Consensus       240 ~v~v~D~a~~i~~~~~~~  257 (294)
                      +...+|++..++.++...
T Consensus       215 ~~~~~~~~~~~~~~~~~~  232 (247)
T PRK08945        215 LKTPEDIMPLYLYLMGDD  232 (247)
T ss_pred             CCCHHHHHHHHHHHhCcc
Confidence            678899999999988543

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.84  E-value=3.5e-19  Score=148.72  Aligned_cols=215  Identities=16%  Similarity=0.143  Sum_probs=146.7

Q ss_pred             CCCCeEEEeCCC--chHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           24 NATKTVCVMDAS--GHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        24 ~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      .++|+++||||+  +.||+.+++.|+++|++|++.+|+....+.+.+   .  ...++.++.+|++|++++.++++    
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~---~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~   79 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQK---L--VDEEDLLVECDVASDESIERAFATIKE   79 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHh---h--ccCceeEEeCCCCCHHHHHHHHHHHHH
Confidence            456899999999  799999999999999999999887322222222   1  12367889999999988877654    


Q ss_pred             ---cCCEEEecCCCCCCC--------Cc--chhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDH--------ST--YDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTS  163 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~--------~~--~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~  163 (294)
                         ++|++||||+.....        ..  ..+..+++|+.+...+.+++... ..-.++|++||.++......     .
T Consensus        80 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~~~-----~  154 (252)
T PRK06079         80 RVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIPN-----Y  154 (252)
T ss_pred             HhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccCCc-----c
Confidence               479999999864310        11  12377899999999998887654 12258999998752211000     1


Q ss_pred             CCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCC---ccccccccccCCCc
Q 043792          164 HDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISN---PYLKGAAEMYEDGV  237 (294)
Q Consensus       164 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~---~~~~~~~~~~~~~~  237 (294)
                                        ..|+.+|.+.+.+.+.++.+   +|+++.+|.||.|-.+......   ...+......+.  
T Consensus       155 ------------------~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--  214 (252)
T PRK06079        155 ------------------NVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVD--  214 (252)
T ss_pred             ------------------hhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcc--
Confidence                              67999999999999998876   4899999999999766421100   000000000111  


Q ss_pred             cccccHHHHHHHHHhhhcCc--CCCCeEEeecc
Q 043792          238 MASVDLRFYVDAHICVFEDV--SSYGRYLCFNH  268 (294)
Q Consensus       238 ~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~~  268 (294)
                      ..+..++|+|++++.++...  ...|+.+..++
T Consensus       215 ~r~~~pedva~~~~~l~s~~~~~itG~~i~vdg  247 (252)
T PRK06079        215 GVGVTIEEVGNTAAFLLSDLSTGVTGDIIYVDK  247 (252)
T ss_pred             cCCCCHHHHHHHHHHHhCcccccccccEEEeCC
Confidence            12788899999999998653  33566544433

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.84  E-value=7.6e-19  Score=147.51  Aligned_cols=218  Identities=12%  Similarity=-0.004  Sum_probs=145.7

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC-hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK-LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      ..++++++||||+|+||+++++.|+++|++|+++.|+..+ ...+.++  ......++.++.+|++|.+++.++++    
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~--l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~   81 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEE--IKKAGGEAIAVKGDVTVESDVVNLIQTAVK   81 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH--HHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Confidence            3467899999999999999999999999999988885432 2333332  11223467889999999998877764    


Q ss_pred             ---cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHH----HhcCCCcEEEEecCcceeeeCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEAC----AQTNTVDKVVFTSSLTAVVWNNHRDNPTSH  164 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  164 (294)
                         .+|++||+++.......      ..++.+++|+.++..+++++    .+.+.-.++|++||.........     . 
T Consensus        82 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~-----~-  155 (261)
T PRK08936         82 EFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPL-----F-  155 (261)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCC-----C-
Confidence               47999999987543221      11267899998887666554    44312368999999642111100     1 


Q ss_pred             CCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccc--ccc-CCCcc
Q 043792          165 DFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAA--EMY-EDGVM  238 (294)
Q Consensus       165 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~--~~~-~~~~~  238 (294)
                                       ..|+.+|.+.+.+.+.++.+.   ++++++++||.+.++.....  +.....  ... .....
T Consensus       156 -----------------~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~  216 (261)
T PRK08936        156 -----------------VHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEK--FADPKQRADVESMIPMG  216 (261)
T ss_pred             -----------------cccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccc--cCCHHHHHHHHhcCCCC
Confidence                             679999999888888876554   89999999999987752211  100000  000 00111


Q ss_pred             ccccHHHHHHHHHhhhcCc--CCCCeEEeec
Q 043792          239 ASVDLRFYVDAHICVFEDV--SSYGRYLCFN  267 (294)
Q Consensus       239 ~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~  267 (294)
                      .+...+|+++.+++++...  ..+|.++..+
T Consensus       217 ~~~~~~~va~~~~~l~s~~~~~~~G~~i~~d  247 (261)
T PRK08936        217 YIGKPEEIAAVAAWLASSEASYVTGITLFAD  247 (261)
T ss_pred             CCcCHHHHHHHHHHHcCcccCCccCcEEEEC
Confidence            2778899999999988643  3355554433

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.84  E-value=3.7e-19  Score=150.34  Aligned_cols=206  Identities=15%  Similarity=0.036  Sum_probs=140.7

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------cC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------GC   99 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~   99 (294)
                      |+++||||+|+||+++++.|+++|++|++++|+.+..+...+++.. .....+.++.+|++|++++.++++       ++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARA-LGGTVPEHRALDISDYDAVAAFAADIHAAHGSM   79 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            4799999999999999999999999999999987655444332211 112234567899999988776654       37


Q ss_pred             CEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc----CCCcEEEEecCcceeeeCCCCCCCCCCCCCCC
Q 043792          100 SGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT----NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDER  169 (294)
Q Consensus       100 d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~  169 (294)
                      |+|||+++......      ...+..+++|+.++.++++++...    +...++|++||..+.. +...    .      
T Consensus        80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~-~~~~----~------  148 (272)
T PRK07832         80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLV-ALPW----H------  148 (272)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccC-CCCC----C------
Confidence            99999998643211      111378999999999999987532    1236899999975321 1111    1      


Q ss_pred             CCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-ccccccc---cc-CCCccccc
Q 043792          170 NWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YLKGAAE---MY-EDGVMASV  241 (294)
Q Consensus       170 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~---~~-~~~~~~~v  241 (294)
                                  ..|+.+|.+.+.+.+.++.+   +++++++++||.+.++....... .......   .+ .......+
T Consensus       149 ------------~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (272)
T PRK07832        149 ------------AAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDRFRGHAV  216 (272)
T ss_pred             ------------cchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHhcccCCC
Confidence                        57999999888887776644   58999999999998876321110 0000000   00 00111268


Q ss_pred             cHHHHHHHHHhhhcC
Q 043792          242 DLRFYVDAHICVFED  256 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~  256 (294)
                      ..+|+|++++.++.+
T Consensus       217 ~~~~vA~~~~~~~~~  231 (272)
T PRK07832        217 TPEKAAEKILAGVEK  231 (272)
T ss_pred             CHHHHHHHHHHHHhc
Confidence            999999999999964

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.83  E-value=6.8e-19  Score=144.24  Aligned_cols=189  Identities=14%  Similarity=0.094  Sum_probs=139.6

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----cCC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----GCS  100 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----~~d  100 (294)
                      |++++||||+|+||+++++.|+++|++|++++|+.++.+.+..        .+++++.+|+++.+.+.++++     .+|
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~--------~~~~~~~~D~~~~~~v~~~~~~~~~~~~d   72 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA--------LGAEALALDVADPASVAGLAWKLDGEALD   72 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh--------ccceEEEecCCCHHHHHHHHHHhcCCCCC
Confidence            4789999999999999999999999999999998765544433        246789999999988887642     379


Q ss_pred             EEEecCCCCCCC--------CcchhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCC
Q 043792          101 GLFYSFEPPSDH--------STYDELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERN  170 (294)
Q Consensus       101 ~Vih~a~~~~~~--------~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~  170 (294)
                      +|||+++.....        ....+..++.|+.++.++++++.+.  ..-.++|++||..+. ++...    .       
T Consensus        73 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~-~~~~~----~-------  140 (222)
T PRK06953         73 AAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGS-IGDAT----G-------  140 (222)
T ss_pred             EEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccc-ccccc----C-------
Confidence            999999875211        1122478999999999999998753  123578999986432 22111    0       


Q ss_pred             CCChhhhhhccchhHhhHHHHHHHHHHHHHhc-CCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHHHHHH
Q 043792          171 WSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR-GISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDA  249 (294)
Q Consensus       171 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~  249 (294)
                        .+.      ..|+.+|...+.+++.++.+. +++++.++||.+..+..   .   .          ...+..++.+..
T Consensus       141 --~~~------~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~---~---~----------~~~~~~~~~~~~  196 (222)
T PRK06953        141 --TTG------WLYRASKAALNDALRAASLQARHATCIALHPGWVRTDMG---G---A----------QAALDPAQSVAG  196 (222)
T ss_pred             --CCc------cccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCC---C---C----------CCCCCHHHHHHH
Confidence              000      359999999999999887665 79999999999976541   1   0          114567888888


Q ss_pred             HHhhhcCcC
Q 043792          250 HICVFEDVS  258 (294)
Q Consensus       250 i~~~~~~~~  258 (294)
                      +..++....
T Consensus       197 ~~~~~~~~~  205 (222)
T PRK06953        197 MRRVIAQAT  205 (222)
T ss_pred             HHHHHHhcC
Confidence            888776543

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.83  E-value=4.3e-19  Score=148.96  Aligned_cols=217  Identities=14%  Similarity=0.072  Sum_probs=143.7

Q ss_pred             CCCCCeEEEeCC--CchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc---
Q 043792           23 SNATKTVCVMDA--SGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK---   97 (294)
Q Consensus        23 ~~~~~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---   97 (294)
                      ..++++++||||  ++.||+++++.|+++|++|++..|+....+.+.+   ..........+.+|++|++++.++++   
T Consensus         3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~---~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   79 (261)
T PRK08690          3 FLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRK---MAAELDSELVFRCDVASDDEINQVFADLG   79 (261)
T ss_pred             ccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHH---HHhccCCceEEECCCCCHHHHHHHHHHHH
Confidence            345689999997  6799999999999999999988775322233333   21111234578999999998887764   


Q ss_pred             ----cCCEEEecCCCCCCC-------C-cc---hhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCC
Q 043792           98 ----GCSGLFYSFEPPSDH-------S-TY---DELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDN  160 (294)
Q Consensus        98 ----~~d~Vih~a~~~~~~-------~-~~---~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~  160 (294)
                          ++|++|||||.....       . ..   .+..+++|+.+...+.+++...  .+-.++|++||.++..... .  
T Consensus        80 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~~-~--  156 (261)
T PRK08690         80 KHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIP-N--  156 (261)
T ss_pred             HHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCCC-C--
Confidence                479999999875321       0 11   1266788999888887765432  1225899999875322111 1  


Q ss_pred             CCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCcccc-ccc--cccC
Q 043792          161 PTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLK-GAA--EMYE  234 (294)
Q Consensus       161 ~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~-~~~--~~~~  234 (294)
                        .                  ..|+.+|.+.+.+.+.++.+   +|+++.++.||.+-.+....   +.. ...  ....
T Consensus       157 --~------------------~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~---~~~~~~~~~~~~~  213 (261)
T PRK08690        157 --Y------------------NVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASG---IADFGKLLGHVAA  213 (261)
T ss_pred             --c------------------ccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhc---CCchHHHHHHHhh
Confidence              1                  67999999999998888754   48999999999997653211   100 000  0000


Q ss_pred             C-CccccccHHHHHHHHHhhhcCc--CCCCeEEeecc
Q 043792          235 D-GVMASVDLRFYVDAHICVFEDV--SSYGRYLCFNH  268 (294)
Q Consensus       235 ~-~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~~  268 (294)
                      . ....+..++|+|+++++++...  ...|..+..++
T Consensus       214 ~~p~~r~~~peevA~~v~~l~s~~~~~~tG~~i~vdg  250 (261)
T PRK08690        214 HNPLRRNVTIEEVGNTAAFLLSDLSSGITGEITYVDG  250 (261)
T ss_pred             cCCCCCCCCHHHHHHHHHHHhCcccCCcceeEEEEcC
Confidence            0 1112778999999999999754  33565444433

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.83  E-value=7.2e-19  Score=147.34  Aligned_cols=217  Identities=16%  Similarity=0.047  Sum_probs=145.5

Q ss_pred             CCCCCeEEEeCCC--chHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc---
Q 043792           23 SNATKTVCVMDAS--GHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK---   97 (294)
Q Consensus        23 ~~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---   97 (294)
                      +.++++++||||+  +.||+.+++.|+++|++|++.+|+.+..+.+.+   .......+.++.+|++|.+++.++++   
T Consensus         7 ~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~---~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   83 (258)
T PRK07533          7 PLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEP---LAEELDAPIFLPLDVREPGQLEAVFARIA   83 (258)
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH---HHHhhccceEEecCcCCHHHHHHHHHHHH
Confidence            3457899999998  599999999999999999999987543322322   11111235678999999988877764   


Q ss_pred             ----cCCEEEecCCCCCCC--------Cc--chhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCC
Q 043792           98 ----GCSGLFYSFEPPSDH--------ST--YDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPT  162 (294)
Q Consensus        98 ----~~d~Vih~a~~~~~~--------~~--~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~  162 (294)
                          .+|++||||+.....        ..  ..++.+++|+.+..++.+++... ..-.++|++||.++..... .    
T Consensus        84 ~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~~-~----  158 (258)
T PRK07533         84 EEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVE-N----  158 (258)
T ss_pred             HHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCCc-c----
Confidence                479999999864310        11  12378999999999999887654 1225799999864211000 0    


Q ss_pred             CCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc---cccccccccCCC
Q 043792          163 SHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP---YLKGAAEMYEDG  236 (294)
Q Consensus       163 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~---~~~~~~~~~~~~  236 (294)
                      .                  ..|+.+|.+.+.+.+.++.+   +++++.++.||.+-.+.......   ..+......+. 
T Consensus       159 ~------------------~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~-  219 (258)
T PRK07533        159 Y------------------NLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPL-  219 (258)
T ss_pred             c------------------hhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCc-
Confidence            1                  67999999999999988876   47999999999996654211000   00000000111 


Q ss_pred             ccccccHHHHHHHHHhhhcCc--CCCCeEEeec
Q 043792          237 VMASVDLRFYVDAHICVFEDV--SSYGRYLCFN  267 (294)
Q Consensus       237 ~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~  267 (294)
                       ..+...+|+|.++++++...  ...|+.+..+
T Consensus       220 -~r~~~p~dva~~~~~L~s~~~~~itG~~i~vd  251 (258)
T PRK07533        220 -RRLVDIDDVGAVAAFLASDAARRLTGNTLYID  251 (258)
T ss_pred             -CCCCCHHHHHHHHHHHhChhhccccCcEEeeC
Confidence             12678899999999998653  3356654433

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.83  E-value=9.4e-19  Score=147.58  Aligned_cols=216  Identities=12%  Similarity=0.032  Sum_probs=144.8

Q ss_pred             CCCCeEEEeCCCc--hHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           24 NATKTVCVMDASG--HFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        24 ~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      .+++++|||||++  .||+.+++.|+++|++|++.+|+....+.+.+   ..........+.+|++|.+++.++++    
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~---~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~   81 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKP---LAESLGSDFVLPCDVEDIASVDAVFEALEK   81 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHH---HHHhcCCceEEeCCCCCHHHHHHHHHHHHH
Confidence            3568999999997  99999999999999999998886533333322   11111123468999999988877764    


Q ss_pred             ---cCCEEEecCCCCCCC--------Cc--chhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDH--------ST--YDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTS  163 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~--------~~--~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~  163 (294)
                         .+|++|||||.....        ..  ..++.+++|+.++.++++++... ..-.++|++||.++..... .    .
T Consensus        82 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~~-~----~  156 (271)
T PRK06505         82 KWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMP-N----Y  156 (271)
T ss_pred             HhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccCC-c----c
Confidence               479999999864321        11  11277899999999998877644 1125899999975322111 1    1


Q ss_pred             CCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc---cccccccccCCCc
Q 043792          164 HDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP---YLKGAAEMYEDGV  237 (294)
Q Consensus       164 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~---~~~~~~~~~~~~~  237 (294)
                                        ..|+.+|.+.+.+.+.++.+.   |+++.+|.||.+..+.......   ..+......+-+ 
T Consensus       157 ------------------~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~-  217 (271)
T PRK06505        157 ------------------NVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLR-  217 (271)
T ss_pred             ------------------chhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCcc-
Confidence                              679999999999999988774   7999999999997654211000   000000001111 


Q ss_pred             cccccHHHHHHHHHhhhcCc--CCCCeEEeec
Q 043792          238 MASVDLRFYVDAHICVFEDV--SSYGRYLCFN  267 (294)
Q Consensus       238 ~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~  267 (294)
                       .+...+|+|++++.++...  ..+|+.+..+
T Consensus       218 -r~~~peeva~~~~fL~s~~~~~itG~~i~vd  248 (271)
T PRK06505        218 -RTVTIDEVGGSALYLLSDLSSGVTGEIHFVD  248 (271)
T ss_pred             -ccCCHHHHHHHHHHHhCccccccCceEEeec
Confidence             2677899999999998643  2356654433

>PRK06484 short chain dehydrogenase; Validated

Probab=99.83  E-value=4.7e-19  Score=163.03  Aligned_cols=214  Identities=14%  Similarity=0.050  Sum_probs=153.3

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      ..++++|||||+|.||+++++.|+++|++|++++|+.++.+.+.+++     ..++..+.+|++|++++.++++      
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~  341 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL-----GDEHLSVQADITDEAAVESAFAQIQARW  341 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEccCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999876655555421     2356778999999998887765      


Q ss_pred             -cCCEEEecCCCCCCC----Cc---chhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDH----ST---YDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~----~~---~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                       .+|++||||+.....    ..   ..++++++|+.++.++++++... .+..+||++||..+.......          
T Consensus       342 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  411 (520)
T PRK06484        342 GRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPPR----------  411 (520)
T ss_pred             CCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCCC----------
Confidence             379999999864321    11   12378999999999999987764 233689999998643211111          


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccc----cccC-CCcccc
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAA----EMYE-DGVMAS  240 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~----~~~~-~~~~~~  240 (294)
                                   ..|+.+|...+.+.+.++.+.   |+++++++||.+.++....   ......    .... .....+
T Consensus       412 -------------~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~---~~~~~~~~~~~~~~~~~~~~~  475 (520)
T PRK06484        412 -------------NAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLA---LKASGRADFDSIRRRIPLGRL  475 (520)
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhh---hccccHHHHHHHHhcCCCCCC
Confidence                         679999999999999988764   7999999999998775211   110000    0000 011126


Q ss_pred             ccHHHHHHHHHhhhcCc--CCCCeE-Eeecc
Q 043792          241 VDLRFYVDAHICVFEDV--SSYGRY-LCFNH  268 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~--~~~~~~-~~~~~  268 (294)
                      ..++|+|++++.++...  ...|+. .+.++
T Consensus       476 ~~~~dia~~~~~l~s~~~~~~~G~~i~vdgg  506 (520)
T PRK06484        476 GDPEEVAEAIAFLASPAASYVNGATLTVDGG  506 (520)
T ss_pred             cCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence            78999999999998643  235654 44443

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.83  E-value=2.5e-19  Score=150.54  Aligned_cols=214  Identities=14%  Similarity=0.039  Sum_probs=148.1

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++++||||+|+||+++++.|+++|++|++++|+.+..+.+.+   .  ...++.++.+|+.|.+++.++++      
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~---~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (262)
T TIGR03325         3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEA---A--HGDAVVGVEGDVRSLDDHKEAVARCVAAF   77 (262)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh---h--cCCceEEEEeccCCHHHHHHHHHHHHHHh
Confidence            356899999999999999999999999999999998765555443   1  13468889999999988777664      


Q ss_pred             -cCCEEEecCCCCCCC-----Cc------chhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDH-----ST------YDELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDNPTS  163 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~-----~~------~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~  163 (294)
                       ++|++|||||.....     ..      ..++.+++|+.++.++++++.+.  ..-.++|++||..++. +...    .
T Consensus        78 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~-~~~~----~  152 (262)
T TIGR03325        78 GKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFY-PNGG----G  152 (262)
T ss_pred             CCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceec-CCCC----C
Confidence             479999999863211     01      12368899999999999998764  1225788888875332 1111    1


Q ss_pred             CCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc--CCeEEEEecCceeCCCCCCCCc-cccc----cc--cccC
Q 043792          164 HDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR--GISMVSINGGLVMGPDVTISNP-YLKG----AA--EMYE  234 (294)
Q Consensus       164 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ilrp~~i~G~~~~~~~~-~~~~----~~--~~~~  234 (294)
                                        ..|+.+|.+.+.+.+.++.+.  .+++.+++||.+..+....... ....    ..  ....
T Consensus       153 ------------------~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~  214 (262)
T TIGR03325       153 ------------------PLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLK  214 (262)
T ss_pred             ------------------chhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhh
Confidence                              579999999999999998875  3899999999997664211000 0000    00  0000


Q ss_pred             C--CccccccHHHHHHHHHhhhcCcC---CCCeEEe
Q 043792          235 D--GVMASVDLRFYVDAHICVFEDVS---SYGRYLC  265 (294)
Q Consensus       235 ~--~~~~~v~v~D~a~~i~~~~~~~~---~~~~~~~  265 (294)
                      .  ....+...+|+|.+++.++....   ..|+.+.
T Consensus       215 ~~~p~~r~~~p~eva~~~~~l~s~~~~~~~tG~~i~  250 (262)
T TIGR03325       215 SVLPIGRMPDAEEYTGAYVFFATRGDTVPATGAVLN  250 (262)
T ss_pred             hcCCCCCCCChHHhhhheeeeecCCCcccccceEEE
Confidence            0  11127788999999998886532   3555433

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.83  E-value=1.1e-18  Score=144.57  Aligned_cols=201  Identities=16%  Similarity=0.135  Sum_probs=140.5

Q ss_pred             EEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC-ChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------cCC
Q 043792           29 VCVMDASGHFASALVRRLLLRGYTVHAALHNHG-KLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------GCS  100 (294)
Q Consensus        29 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~d  100 (294)
                      |+||||+|+||.++++.|+++|++|++++|+.+ ..+.+..+  ......++.++.+|++|.+++..+++       .+|
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~   78 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSA--IQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYY   78 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH--HHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            689999999999999999999999999887643 23333332  22234568899999999998877764       369


Q ss_pred             EEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHH-----hcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCC
Q 043792          101 GLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACA-----QTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDER  169 (294)
Q Consensus       101 ~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~-----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~  169 (294)
                      ++||+++......      ...+.++++|+.++.++++++.     +. +.++||++||.++.. +...    .      
T Consensus        79 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~iv~vsS~~~~~-~~~~----~------  146 (239)
T TIGR01831        79 GVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRAR-QGGRIITLASVSGVM-GNRG----Q------  146 (239)
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhc-CCeEEEEEcchhhcc-CCCC----C------
Confidence            9999988644321      1123789999999999988753     23 446899999976432 2211    1      


Q ss_pred             CCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHHH
Q 043792          170 NWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFY  246 (294)
Q Consensus       170 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~  246 (294)
                                  ..|+.+|.+.+.+.+.++.+   .++++++++||.+.++................+-  ..+...+|+
T Consensus       147 ------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~v  212 (239)
T TIGR01831       147 ------------VNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHDLDEALKTVPM--NRMGQPAEV  212 (239)
T ss_pred             ------------cchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhHHHHHHHhcCCC--CCCCCHHHH
Confidence                        67999999999888888765   4899999999999777532111000000001111  126678999


Q ss_pred             HHHHHhhhcCc
Q 043792          247 VDAHICVFEDV  257 (294)
Q Consensus       247 a~~i~~~~~~~  257 (294)
                      ++++++++...
T Consensus       213 a~~~~~l~~~~  223 (239)
T TIGR01831       213 ASLAGFLMSDG  223 (239)
T ss_pred             HHHHHHHcCch
Confidence            99999998753

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.83  E-value=6.9e-19  Score=147.60  Aligned_cols=214  Identities=17%  Similarity=0.115  Sum_probs=142.5

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------cC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------GC   99 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~   99 (294)
                      |+|+||||+|.||+.+++.|+++|++|++++|+++..+.+.+++.   ...++.++.+|++|.++++++++       ++
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~---~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~i   77 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELK---EYGEVYAVKADLSDKDDLKNLVKEAWELLGGI   77 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH---hcCCceEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            589999999999999999999999999999998766555544321   12367889999999998887764       57


Q ss_pred             CEEEecCCCCCCC-----Ccch---hhhHhHhhHHHHHHHHH----HHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792          100 SGLFYSFEPPSDH-----STYD---ELTAEVETMAAHNVLEA----CAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus       100 d~Vih~a~~~~~~-----~~~~---~~~~~~n~~~~~~ll~~----~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                      |++||+||.....     ....   .+.+.+|+.+...+.++    +.+.++..++|++||..+.. +...    .    
T Consensus        78 d~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~-~~~~----~----  148 (259)
T PRK08340         78 DALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKE-PMPP----L----  148 (259)
T ss_pred             CEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCC-CCCC----c----
Confidence            9999999864311     1111   14567787776555443    32221346899999975321 1000    1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc-ccc--cc--c-----cccC
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP-YLK--GA--A-----EMYE  234 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~-~~~--~~--~-----~~~~  234 (294)
                                    ..|+.+|.+.+.+.+.++.+.   |+++..+.||.+-.+....... ..+  +.  .     ....
T Consensus       149 --------------~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (259)
T PRK08340        149 --------------VLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLE  214 (259)
T ss_pred             --------------hHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhc
Confidence                          679999999999999988764   7999999999987664211000 000  00  0     0000


Q ss_pred             C-CccccccHHHHHHHHHhhhcCc--CCCCeEEee
Q 043792          235 D-GVMASVDLRFYVDAHICVFEDV--SSYGRYLCF  266 (294)
Q Consensus       235 ~-~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~  266 (294)
                      . ....+...+|+|++++.++..+  ..+|+.+..
T Consensus       215 ~~p~~r~~~p~dva~~~~fL~s~~~~~itG~~i~v  249 (259)
T PRK08340        215 RTPLKRTGRWEELGSLIAFLLSENAEYMLGSTIVF  249 (259)
T ss_pred             cCCccCCCCHHHHHHHHHHHcCcccccccCceEee
Confidence            1 1112778999999999998753  335654433

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.83  E-value=9.8e-19  Score=143.31  Aligned_cols=192  Identities=13%  Similarity=0.073  Sum_probs=140.7

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----cCCEE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----GCSGL  102 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----~~d~V  102 (294)
                      ||++||||+|.||+++++.|+++|++|++++|+.++.+.+.++       .++.++.+|++|++++.++++    .+|++
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~-------~~~~~~~~D~~~~~~v~~~~~~~~~~id~l   73 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKE-------LDVDAIVCDNTDPASLEEARGLFPHHLDTI   73 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh-------ccCcEEecCCCCHHHHHHHHHHHhhcCcEE
Confidence            4799999999999999999999999999999986555444331       146788999999999888775    47999


Q ss_pred             EecCCCCCC-----------CCcchhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCC
Q 043792          103 FYSFEPPSD-----------HSTYDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERN  170 (294)
Q Consensus       103 ih~a~~~~~-----------~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~  170 (294)
                      |||++....           .....++.+++|+.++.++++++.+. ..-.++|++||..    ....            
T Consensus        74 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~----~~~~------------  137 (223)
T PRK05884         74 VNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN----PPAG------------  137 (223)
T ss_pred             EECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC----CCCc------------
Confidence            999874210           01112388999999999999988754 1225899999863    1111            


Q ss_pred             CCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHHHH
Q 043792          171 WSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYV  247 (294)
Q Consensus       171 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a  247 (294)
                                 ..|+.+|.+.+.+.+.++.+   ++++++++.||.+..+..   .    +...      .+.-.++|++
T Consensus       138 -----------~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~---~----~~~~------~p~~~~~~ia  193 (223)
T PRK05884        138 -----------SAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGY---D----GLSR------TPPPVAAEIA  193 (223)
T ss_pred             -----------cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhh---h----hccC------CCCCCHHHHH
Confidence                       57999999999999988876   479999999999865531   1    0000      0112679999


Q ss_pred             HHHHhhhcCc--CCCCeEEe
Q 043792          248 DAHICVFEDV--SSYGRYLC  265 (294)
Q Consensus       248 ~~i~~~~~~~--~~~~~~~~  265 (294)
                      ++++.++...  ...|+.+.
T Consensus       194 ~~~~~l~s~~~~~v~G~~i~  213 (223)
T PRK05884        194 RLALFLTTPAARHITGQTLH  213 (223)
T ss_pred             HHHHHHcCchhhccCCcEEE
Confidence            9999988653  33555443

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.83  E-value=1.2e-18  Score=145.85  Aligned_cols=220  Identities=15%  Similarity=0.110  Sum_probs=145.8

Q ss_pred             CCCCCeEEEeCCC--chHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc---
Q 043792           23 SNATKTVCVMDAS--GHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK---   97 (294)
Q Consensus        23 ~~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---   97 (294)
                      +..+++++||||+  +.||+++++.|+++|++|++..|+....+.+.+.. ......++.++.+|++|++++.++++   
T Consensus         4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   82 (257)
T PRK08594          4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELA-DTLEGQESLLLPCDVTSDEEITACFETIK   82 (257)
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHH-HHcCCCceEEEecCCCCHHHHHHHHHHHH
Confidence            4457899999997  89999999999999999999887543222232200 01113468889999999988877764   


Q ss_pred             ----cCCEEEecCCCCCC----C---Ccch---hhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCC
Q 043792           98 ----GCSGLFYSFEPPSD----H---STYD---ELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPT  162 (294)
Q Consensus        98 ----~~d~Vih~a~~~~~----~---~~~~---~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~  162 (294)
                          .+|++||||+....    .   ....   ...+++|+.+...+++++... ..-.++|++||..+......     
T Consensus        83 ~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~-----  157 (257)
T PRK08594         83 EEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQN-----  157 (257)
T ss_pred             HhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCCC-----
Confidence                37999999986421    0   1111   267889999988888877654 12258999999753221111     


Q ss_pred             CCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccc-cccCC-Cc
Q 043792          163 SHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAA-EMYED-GV  237 (294)
Q Consensus       163 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~-~~~~~-~~  237 (294)
                      .                  ..|+.+|.+.+.+.+.++.+.   |+++.+|.||.+..+........ .... ..... ..
T Consensus       158 ~------------------~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~p~  218 (257)
T PRK08594        158 Y------------------NVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGF-NSILKEIEERAPL  218 (257)
T ss_pred             C------------------chhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccc-cHHHHHHhhcCCc
Confidence            1                  679999999999999888654   79999999999976531100000 0000 00000 11


Q ss_pred             cccccHHHHHHHHHhhhcCc--CCCCeEEeec
Q 043792          238 MASVDLRFYVDAHICVFEDV--SSYGRYLCFN  267 (294)
Q Consensus       238 ~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~  267 (294)
                      ..+...+|+|+++++++...  ...|+.+..+
T Consensus       219 ~r~~~p~~va~~~~~l~s~~~~~~tG~~~~~d  250 (257)
T PRK08594        219 RRTTTQEEVGDTAAFLFSDLSRGVTGENIHVD  250 (257)
T ss_pred             cccCCHHHHHHHHHHHcCcccccccceEEEEC
Confidence            12678999999999998653  2356644333

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.83  E-value=1.1e-18  Score=143.91  Aligned_cols=218  Identities=16%  Similarity=0.036  Sum_probs=148.2

Q ss_pred             CCCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           22 SSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        22 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      ....+|.|+|||||..||.+++.+|.++|.+++.+.|...+.+.+.++++......++.++++|++|.++..++++    
T Consensus         8 e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~   87 (282)
T KOG1205|consen    8 ERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIR   87 (282)
T ss_pred             HHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHH
Confidence            3456899999999999999999999999999999999888877774443332222369999999999999987763    


Q ss_pred             ---cCCEEEecCCCCCCCCcch------hhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHSTYD------ELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~~~~------~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                         ++|++|||||.........      ...+++|+.|+..+.+++...   .+-.|+|.+||++....-+..       
T Consensus        88 ~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~-------  160 (282)
T KOG1205|consen   88 HFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFR-------  160 (282)
T ss_pred             hcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcc-------
Confidence               6899999999866321111      268999999999998887655   134699999998633322111       


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeE--E--EEecCceeCCCCCCCCccccccccccCCCccccc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISM--V--SINGGLVMGPDVTISNPYLKGAAEMYEDGVMASV  241 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~--~--ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v  241 (294)
                                      ..|.+||.+.+.+.+.+..+..-..  +  ++.||.|-.......  + .+...-  .....+.
T Consensus       161 ----------------~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te~~~~~--~-~~~~~~--~~~~~~~  219 (282)
T KOG1205|consen  161 ----------------SIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIETEFTGKE--L-LGEEGK--SQQGPFL  219 (282)
T ss_pred             ----------------cccchHHHHHHHHHHHHHHHhhccCceEEEEEecCceeecccchh--h-cccccc--ccccchh
Confidence                            5799999999999999988863211  2  478888743321100  1 111000  1112244


Q ss_pred             cHHHHHH--HHHhhhcCcCCCCe--EEeec
Q 043792          242 DLRFYVD--AHICVFEDVSSYGR--YLCFN  267 (294)
Q Consensus       242 ~v~D~a~--~i~~~~~~~~~~~~--~~~~~  267 (294)
                      ...|.+.  .++.++..+...+.  ++..+
T Consensus       220 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p  249 (282)
T KOG1205|consen  220 RTEDVADPEAVAYAISTPPCRQVEDIIIAP  249 (282)
T ss_pred             hhhhhhhHHHHHHHHhcCcccchhheeecc
Confidence            4556644  77777766554432  54443

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.83  E-value=8.5e-19  Score=148.25  Aligned_cols=235  Identities=15%  Similarity=0.078  Sum_probs=147.0

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------cC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------GC   99 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------~~   99 (294)
                      ++.++|||| |+||+++++.|. +|++|++++|+.++.+.+.+++  .....++.++.+|++|.+++.++++      .+
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l--~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~i   77 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTL--REAGFDVSTQEVDVSSRESVKALAATAQTLGPV   77 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHH--HhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCC
Confidence            578999998 799999999996 8999999999876555444322  1223467889999999998887765      47


Q ss_pred             CEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCC--CCCCCCCCCCCCCChhh
Q 043792          100 SGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRD--NPTSHDFDERNWSDVNL  176 (294)
Q Consensus       100 d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~--~~~~~~~~e~~~~~~~~  176 (294)
                      |++||||+.... ....+..+++|+.++.++++++.+. ..-.++|++||..+........  .+.-..++..+......
T Consensus        78 d~li~nAG~~~~-~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (275)
T PRK06940         78 TGLVHTAGVSPS-QASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPF  156 (275)
T ss_pred             CEEEECCCcCCc-hhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccccccccc
Confidence            999999997532 2234588999999999999988754 1114567888865332210000  00000001110000000


Q ss_pred             --hh---hccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccc--cccC-CCccccccHHH
Q 043792          177 --CK---KFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAA--EMYE-DGVMASVDLRF  245 (294)
Q Consensus       177 --~~---~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~--~~~~-~~~~~~v~v~D  245 (294)
                        ..   .....|+.||.+.+.+.+.++.+   +|++++++.||.+..+.......-..+..  .... .....+...+|
T Consensus       157 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pee  236 (275)
T PRK06940        157 LQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPAGRPGTPDE  236 (275)
T ss_pred             ccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCCcccCCCHHH
Confidence              00   01167999999999998887765   37999999999997764211000000000  0100 01112788999


Q ss_pred             HHHHHHhhhcCc--CCCCeEEe
Q 043792          246 YVDAHICVFEDV--SSYGRYLC  265 (294)
Q Consensus       246 ~a~~i~~~~~~~--~~~~~~~~  265 (294)
                      +|++++.++...  ..+|+.+.
T Consensus       237 ia~~~~fL~s~~~~~itG~~i~  258 (275)
T PRK06940        237 IAALAEFLMGPRGSFITGSDFL  258 (275)
T ss_pred             HHHHHHHHcCcccCcccCceEE
Confidence            999999988643  33565433

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.83  E-value=9.7e-19  Score=165.37  Aligned_cols=200  Identities=18%  Similarity=0.105  Sum_probs=148.3

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++++++||||+|+||+++++.|+++|++|++++|+.+..+.+.+++  .....++.++.+|++|.+++.++++     
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  445 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEI--RAKGGTAHAYTCDLTDSAAVDHTVKDILAE  445 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH--HhcCCcEEEEEecCCCHHHHHHHHHHHHHh
Confidence            345789999999999999999999999999999999876655554432  1224468899999999998888776     


Q ss_pred             --cCCEEEecCCCCCCCC--------cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS--------TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSH  164 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~--------~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~  164 (294)
                        ++|++|||||......        ...+..+++|+.++.++++++...   .+.++||++||.+++......      
T Consensus       446 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------  519 (657)
T PRK07201        446 HGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRF------  519 (657)
T ss_pred             cCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCc------
Confidence              5799999998642111        122378899999998887776432   256799999998633211111      


Q ss_pred             CCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCCCccccc
Q 043792          165 DFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASV  241 (294)
Q Consensus       165 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v  241 (294)
                                       ..|+.+|.+.+.+.+.++.+   .++++++++||.|..+......        .+.  ...++
T Consensus       520 -----------------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~--------~~~--~~~~~  572 (657)
T PRK07201        520 -----------------SAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTK--------RYN--NVPTI  572 (657)
T ss_pred             -----------------chHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCccc--------ccc--CCCCC
Confidence                             67999999999999988766   4899999999999776522110        111  12267


Q ss_pred             cHHHHHHHHHhhhcCc
Q 043792          242 DLRFYVDAHICVFEDV  257 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~  257 (294)
                      ..+++|+.++..+.+.
T Consensus       573 ~~~~~a~~i~~~~~~~  588 (657)
T PRK07201        573 SPEEAADMVVRAIVEK  588 (657)
T ss_pred             CHHHHHHHHHHHHHhC
Confidence            8999999999987543

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.83  E-value=1.6e-18  Score=130.87  Aligned_cols=203  Identities=17%  Similarity=0.209  Sum_probs=148.8

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEecC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSF  106 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~a  106 (294)
                      |||.|+||||.+|++++++.+++||+|++++|++++....          +.+.+++.|+.|+..+.+.+.+.|+||...
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~----------~~~~i~q~Difd~~~~a~~l~g~DaVIsA~   70 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR----------QGVTILQKDIFDLTSLASDLAGHDAVISAF   70 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc----------ccceeecccccChhhhHhhhcCCceEEEec
Confidence            7899999999999999999999999999999998764322          378899999999999999999999999997


Q ss_pred             CCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHh
Q 043792          107 EPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGL  186 (294)
Q Consensus       107 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~  186 (294)
                      +....      ..-.........+++.++.. +++|++.++..+...-...       ..-.+.|.-|.      ..|..
T Consensus        71 ~~~~~------~~~~~~~k~~~~li~~l~~a-gv~RllVVGGAGSL~id~g-------~rLvD~p~fP~------ey~~~  130 (211)
T COG2910          71 GAGAS------DNDELHSKSIEALIEALKGA-GVPRLLVVGGAGSLEIDEG-------TRLVDTPDFPA------EYKPE  130 (211)
T ss_pred             cCCCC------ChhHHHHHHHHHHHHHHhhc-CCeeEEEEcCccceEEcCC-------ceeecCCCCch------hHHHH
Confidence            76532      11223344577788888888 8999999888764332221       12223333333      33555


Q ss_pred             hHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCcccccccccc-CCCccccccHHHHHHHHHhhhcCcCCCC
Q 043792          187 SKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAAEMY-EDGVMASVDLRFYVDAHICVFEDVSSYG  261 (294)
Q Consensus       187 sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~-~~~~~~~v~v~D~a~~i~~~~~~~~~~~  261 (294)
                      ++..+| .+..+..+.+++|+.+-|+.+|-|+...++ +.-|+.... ....-.+|+..|.|-+++.-++++....
T Consensus       131 A~~~ae-~L~~Lr~~~~l~WTfvSPaa~f~PGerTg~-yrlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~h~r  204 (211)
T COG2910         131 ALAQAE-FLDSLRAEKSLDWTFVSPAAFFEPGERTGN-YRLGGDQLLVNAKGESRISYADYAIAVLDELEKPQHIR  204 (211)
T ss_pred             HHHHHH-HHHHHhhccCcceEEeCcHHhcCCccccCc-eEeccceEEEcCCCceeeeHHHHHHHHHHHHhcccccc
Confidence            555554 556666666799999999999999866555 444444333 3333359999999999999999887644

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.83  E-value=8.7e-19  Score=145.37  Aligned_cols=203  Identities=15%  Similarity=0.092  Sum_probs=137.7

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecC-CCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------c
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHN-HGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------G   98 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~   98 (294)
                      +++|||||+|+||+++++.|+++|++|+++.|+ ....+.+..+  ......++.++.+|++|++++.++++       .
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQE--QGALGFDFRVVEGDVSSFESCKAAVAKVEAELGP   78 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH--HHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            579999999999999999999999999999883 3222222221  11223468899999999988877664       4


Q ss_pred             CCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHH----HhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           99 CSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEAC----AQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                      +|+|||+++......      ......++.|+.++..+++++    ++. +.+++|++||..+.. +...    .     
T Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~-~~~~----~-----  147 (242)
T TIGR01829        79 IDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRER-GWGRIINISSVNGQK-GQFG----Q-----  147 (242)
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcchhhcC-CCCC----c-----
Confidence            799999998643211      112367889999987766554    444 667999999964221 1111    1     


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-cccccccccCCCccccccHH
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YLKGAAEMYEDGVMASVDLR  244 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~v~v~  244 (294)
                                   ..|+.+|.+.+.+++.++.+   .++++++++|+.+.++....... ........  .....+...+
T Consensus       148 -------------~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~--~~~~~~~~~~  212 (242)
T TIGR01829       148 -------------TNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMREDVLNSIVAQ--IPVGRLGRPE  212 (242)
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccchHHHHHHHhc--CCCCCCcCHH
Confidence                         57999999999888887654   48999999999998775321110 00000000  1111256789


Q ss_pred             HHHHHHHhhhcCc
Q 043792          245 FYVDAHICVFEDV  257 (294)
Q Consensus       245 D~a~~i~~~~~~~  257 (294)
                      |+++++.+++..+
T Consensus       213 ~~a~~~~~l~~~~  225 (242)
T TIGR01829       213 EIAAAVAFLASEE  225 (242)
T ss_pred             HHHHHHHHHcCch
Confidence            9999998877653

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.82  E-value=1.1e-18  Score=150.26  Aligned_cols=199  Identities=12%  Similarity=0.061  Sum_probs=140.6

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCC--hhHHH---HHhcc-
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFD--YHSLV---NALKG-   98 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~--~~~~~---~~~~~-   98 (294)
                      .++.++||||||+||++++++|+++|++|++++|++++.+.+.+++.......++..+.+|+++  .+.+.   +.+.+ 
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~  131 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL  131 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence            4689999999999999999999999999999999987766665543211112357788899975  23333   33333 


Q ss_pred             -CCEEEecCCCCCCC------Ccc--hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           99 -CSGLFYSFEPPSDH------STY--DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        99 -~d~Vih~a~~~~~~------~~~--~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                       +|++|||||.....      ...  .+..+++|+.++.++.+++...   .+..++|++||.++...+. .  |..   
T Consensus       132 didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~-~--p~~---  205 (320)
T PLN02780        132 DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPS-D--PLY---  205 (320)
T ss_pred             CccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCC-C--ccc---
Confidence             56999999875321      111  1278999999999988886532   2557899999976432110 0  001   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccccccCCCccccccH
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDL  243 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v  243 (294)
                                     ..|+.||.+.+.+.+.++.+.   |+++++++||.+-.+...    .   .     .........
T Consensus       206 ---------------~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~----~---~-----~~~~~~~~p  258 (320)
T PLN02780        206 ---------------AVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMAS----I---R-----RSSFLVPSS  258 (320)
T ss_pred             ---------------hHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccc----c---c-----CCCCCCCCH
Confidence                           679999999999999988764   799999999999665421    0   0     011114578


Q ss_pred             HHHHHHHHhhhcC
Q 043792          244 RFYVDAHICVFED  256 (294)
Q Consensus       244 ~D~a~~i~~~~~~  256 (294)
                      +++|+.++..+..
T Consensus       259 ~~~A~~~~~~~~~  271 (320)
T PLN02780        259 DGYARAALRWVGY  271 (320)
T ss_pred             HHHHHHHHHHhCC
Confidence            9999999999854

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.82  E-value=2.3e-18  Score=147.81  Aligned_cols=231  Identities=13%  Similarity=0.050  Sum_probs=154.6

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC-ChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG-KLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      ..++++++||||+|+||+++++.|+++|++|++.+++.. ..+.+.+++  ...+.++.++.+|++|.+++.++++    
T Consensus         9 ~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i--~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~   86 (306)
T PRK07792          9 DLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEI--RAAGAKAVAVAGDISQRATADELVATAVG   86 (306)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHH--HhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999887543 333433322  1234568899999999988877765    


Q ss_pred             --cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc-----C-----CCcEEEEecCcceeeeCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT-----N-----TVDKVVFTSSLTAVVWNNHRD  159 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~-----~-----~~~~~v~~Ss~~~~~~~~~~~  159 (294)
                        ++|+|||||+......      ...+..+++|+.++.++++++...     .     ...++|++||..+.. +... 
T Consensus        87 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-~~~~-  164 (306)
T PRK07792         87 LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLV-GPVG-  164 (306)
T ss_pred             hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccccc-CCCC-
Confidence              4799999998754321      112378899999999999886532     0     124899999975322 2111 


Q ss_pred             CCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCCC
Q 043792          160 NPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDG  236 (294)
Q Consensus       160 ~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~  236 (294)
                         .                  ..|+.+|.+.+.+.+.++.+   +|+++.++.|+. ..+.   ............ ..
T Consensus       165 ---~------------------~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~---~~~~~~~~~~~~-~~  218 (306)
T PRK07792        165 ---Q------------------ANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAM---TADVFGDAPDVE-AG  218 (306)
T ss_pred             ---C------------------chHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCch---hhhhccccchhh-hh
Confidence               1                  56999999999999988765   589999999973 1111   110111111000 11


Q ss_pred             ccccccHHHHHHHHHhhhcCc--CCCCe-EEeec-------------------ccccHHHHHHHHHHHh
Q 043792          237 VMASVDLRFYVDAHICVFEDV--SSYGR-YLCFN-------------------HVINCNEDAMKLARML  283 (294)
Q Consensus       237 ~~~~v~v~D~a~~i~~~~~~~--~~~~~-~~~~~-------------------~~~s~~~~~~~~~~~~  283 (294)
                      ...++.++|++.+++.++...  ..+|+ +.+.+                   +.++..|+.+.+.+.+
T Consensus       219 ~~~~~~pe~va~~v~~L~s~~~~~~tG~~~~v~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (306)
T PRK07792        219 GIDPLSPEHVVPLVQFLASPAAAEVNGQVFIVYGPMVTLVAAPVVERRFDADGDAWDPGELSATLRDYF  287 (306)
T ss_pred             ccCCCCHHHHHHHHHHHcCccccCCCCCEEEEcCCeEEEEeeeeecceecCCCCCCCHHHHHHHHHHHh
Confidence            223568999999998887642  22343 32221                   2367777877777763

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.82  E-value=1e-18  Score=147.55  Aligned_cols=217  Identities=13%  Similarity=0.083  Sum_probs=144.3

Q ss_pred             CCCCeEEEeCCC--chHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhc-cCCCCeEEEECCCCChhHHHHHhc---
Q 043792           24 NATKTVCVMDAS--GHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINY-NEEKKLKVFQADPFDYHSLVNALK---   97 (294)
Q Consensus        24 ~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~---   97 (294)
                      .++|+++||||+  +.||+.+++.|+++|++|++.+|+....+.+.+   .. ..... .++.+|++|.+++.++++   
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~---~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~   78 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEP---IAQELGSD-YVYELDVSKPEHFKSLAESLK   78 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHH---HHHhcCCc-eEEEecCCCHHHHHHHHHHHH
Confidence            356899999997  799999999999999999998887432222222   11 11123 578999999998877764   


Q ss_pred             ----cCCEEEecCCCCCC----C---C-c--chhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCC
Q 043792           98 ----GCSGLFYSFEPPSD----H---S-T--YDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPT  162 (294)
Q Consensus        98 ----~~d~Vih~a~~~~~----~---~-~--~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~  162 (294)
                          .+|++|||||....    .   . .  ..++.+++|+.++..+.+++... ..-.++|++||.++......     
T Consensus        79 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~~-----  153 (274)
T PRK08415         79 KDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVPH-----  153 (274)
T ss_pred             HHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCCCc-----
Confidence                46999999986421    0   1 1  11378999999999998887654 12258999998753211100     


Q ss_pred             CCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccC-CCcc
Q 043792          163 SHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYE-DGVM  238 (294)
Q Consensus       163 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~-~~~~  238 (294)
                      .                  ..|+.+|.+.+.+.+.++.+   +|+++.++.||.+..+................. ....
T Consensus       154 ~------------------~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~  215 (274)
T PRK08415        154 Y------------------NVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPLK  215 (274)
T ss_pred             c------------------hhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCchh
Confidence            1                  67999999999999998876   479999999999976531100000000000000 0111


Q ss_pred             ccccHHHHHHHHHhhhcCc--CCCCeEEeec
Q 043792          239 ASVDLRFYVDAHICVFEDV--SSYGRYLCFN  267 (294)
Q Consensus       239 ~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~  267 (294)
                      .+..++|+|++++.++...  ..+|+.+..+
T Consensus       216 r~~~pedva~~v~fL~s~~~~~itG~~i~vd  246 (274)
T PRK08415        216 KNVSIEEVGNSGMYLLSDLSSGVTGEIHYVD  246 (274)
T ss_pred             ccCCHHHHHHHHHHHhhhhhhcccccEEEEc
Confidence            2678999999999998743  3356644433

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.82  E-value=2.2e-19  Score=149.19  Aligned_cols=201  Identities=17%  Similarity=0.060  Sum_probs=136.4

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--------
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--------   97 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--------   97 (294)
                      ||+|+||||+|+||++++++|+++|++|++++|+..+.  +..     ....++.++.+|+.|.+++.+++.        
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~~~-----~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   73 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--LAA-----AAGERLAEVELDLSDAAAAAAWLAGDLLAAFV   73 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--hhh-----ccCCeEEEEEeccCCHHHHHHHHHHHHHHHhc
Confidence            47999999999999999999999999999999976532  111     123468889999999988877442        


Q ss_pred             ---cCCEEEecCCCCCCCC-------cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHS-------TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSH  164 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~-------~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~  164 (294)
                         .+|++|||++......       +.....+++|+.++..+.+.+.+.   .+.+++|++||..+.......      
T Consensus        74 ~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~------  147 (243)
T PRK07023         74 DGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGW------  147 (243)
T ss_pred             cCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCc------
Confidence               3689999988643211       112377889999977776665433   145799999997532211111      


Q ss_pred             CCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh--cCCeEEEEecCceeCCCCCCCCccc-ccc-----c-cccCC
Q 043792          165 DFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD--RGISMVSINGGLVMGPDVTISNPYL-KGA-----A-EMYED  235 (294)
Q Consensus       165 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~ilrp~~i~G~~~~~~~~~~-~~~-----~-~~~~~  235 (294)
                                       ..|+.+|.+.|.+++.++.+  .++++++++||.+-.+......... ...     . ...+.
T Consensus       148 -----------------~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (243)
T PRK07023        148 -----------------SVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKAS  210 (243)
T ss_pred             -----------------hHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhc
Confidence                             67999999999999988865  5799999999988554310000000 000     0 00011


Q ss_pred             CccccccHHHHHHHHHhhhcCcC
Q 043792          236 GVMASVDLRFYVDAHICVFEDVS  258 (294)
Q Consensus       236 ~~~~~v~v~D~a~~i~~~~~~~~  258 (294)
                      +  .++..+|+|..++..+..+.
T Consensus       211 ~--~~~~~~~va~~~~~~l~~~~  231 (243)
T PRK07023        211 G--ALSTPEDAARRLIAYLLSDD  231 (243)
T ss_pred             C--CCCCHHHHHHHHHHHHhccc
Confidence            1  26778999997766665543

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.82  E-value=1.6e-18  Score=146.30  Aligned_cols=219  Identities=11%  Similarity=0.037  Sum_probs=146.3

Q ss_pred             CCCCeEEEeCCC--chHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           24 NATKTVCVMDAS--GHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        24 ~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      ..+++++||||+  +.||..+++.|+++|++|++..|+....+.+.+   ..........+.+|++|+++++++++    
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~---l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   84 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEP---LAAELGAFVAGHCDVTDEASIDAVFETLEK   84 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHH---HHHhcCCceEEecCCCCHHHHHHHHHHHHH
Confidence            346899999997  899999999999999999988775322223322   11111235678999999998887764    


Q ss_pred             ---cCCEEEecCCCCCCC--------Cc--chhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDH--------ST--YDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTS  163 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~--------~~--~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~  163 (294)
                         .+|++||||+.....        ..  ..+..+++|+.++..+++++.+. .+-.++|++||.++.. +...    .
T Consensus        85 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~-~~p~----~  159 (272)
T PRK08159         85 KWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEK-VMPH----Y  159 (272)
T ss_pred             hcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEecccccc-CCCc----c
Confidence               479999999864310        11  12378999999999999987754 2225899999864211 1000    1


Q ss_pred             CCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCcc--ccccc-cccCCCc
Q 043792          164 HDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPY--LKGAA-EMYEDGV  237 (294)
Q Consensus       164 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~--~~~~~-~~~~~~~  237 (294)
                                        ..|+.+|.+.+.+.+.++.+.   ++++.++.||.+..+........  ..... ...+-  
T Consensus       160 ------------------~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--  219 (272)
T PRK08159        160 ------------------NVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPL--  219 (272)
T ss_pred             ------------------hhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcc--
Confidence                              679999999999999888764   79999999999965431100000  00000 00111  


Q ss_pred             cccccHHHHHHHHHhhhcCc--CCCCeEEeecccc
Q 043792          238 MASVDLRFYVDAHICVFEDV--SSYGRYLCFNHVI  270 (294)
Q Consensus       238 ~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~~~~  270 (294)
                      ..+...+|+|+++++++...  ..+|+.+..++..
T Consensus       220 ~r~~~peevA~~~~~L~s~~~~~itG~~i~vdgG~  254 (272)
T PRK08159        220 RRTVTIEEVGDSALYLLSDLSRGVTGEVHHVDSGY  254 (272)
T ss_pred             cccCCHHHHHHHHHHHhCccccCccceEEEECCCc
Confidence            12678899999999999753  3356655444433

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.82  E-value=2.9e-18  Score=143.85  Aligned_cols=219  Identities=12%  Similarity=0.043  Sum_probs=149.1

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc---cCC
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK---GCS  100 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---~~d  100 (294)
                      ..+++|+||||+|.||+++++.|+++|++|++++|+.++.+.+.+++. .....++.++.+|++|++++.++++   .+|
T Consensus         5 ~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id   83 (259)
T PRK06125          5 LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLR-AAHGVDVAVHALDLSSPEAREQLAAEAGDID   83 (259)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH-hhcCCceEEEEecCCCHHHHHHHHHHhCCCC
Confidence            346899999999999999999999999999999998766555444221 1123468889999999998887775   479


Q ss_pred             EEEecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCC
Q 043792          101 GLFYSFEPPSDHS----T--YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNW  171 (294)
Q Consensus       101 ~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~  171 (294)
                      ++|||++......    .  ..+..+++|+.+..++++++.+.   .+..++|++||........ .    .        
T Consensus        84 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~-~----~--------  150 (259)
T PRK06125         84 ILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDA-D----Y--------  150 (259)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCC-C----c--------
Confidence            9999998643211    1  11377899999998888876433   1345899999864211100 0    0        


Q ss_pred             CChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCC-----ccccccc----cccCC-Ccc
Q 043792          172 SDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISN-----PYLKGAA----EMYED-GVM  238 (294)
Q Consensus       172 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~-----~~~~~~~----~~~~~-~~~  238 (294)
                                ..|+.+|.+.+.+.+.++.+   .+++++.++||.+..+......     ... +..    ..... ...
T Consensus       151 ----------~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  219 (259)
T PRK06125        151 ----------ICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAEL-GDESRWQELLAGLPLG  219 (259)
T ss_pred             ----------hHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhccc-CCHHHHHHHhccCCcC
Confidence                      56899999999999988764   4899999999999776311000     000 000    00001 111


Q ss_pred             ccccHHHHHHHHHhhhcCc--CCCCeEEeec
Q 043792          239 ASVDLRFYVDAHICVFEDV--SSYGRYLCFN  267 (294)
Q Consensus       239 ~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~  267 (294)
                      .+..++|+|++++.++...  ..+|..+..+
T Consensus       220 ~~~~~~~va~~~~~l~~~~~~~~~G~~i~vd  250 (259)
T PRK06125        220 RPATPEEVADLVAFLASPRSGYTSGTVVTVD  250 (259)
T ss_pred             CCcCHHHHHHHHHHHcCchhccccCceEEec
Confidence            2778999999999988643  2356544333

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1.8e-18  Score=145.49  Aligned_cols=218  Identities=16%  Similarity=0.055  Sum_probs=146.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++++||||+|+||+++++.|+++|++|++++|+.++.+...+++.......++.++.+|++|.+++.++++      
T Consensus         6 l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (265)
T PRK07062          6 LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARF   85 (265)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            45689999999999999999999999999999999877665554432111112367789999999988877654      


Q ss_pred             -cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                       .+|++||||+.......      .....+++|+.+...+++++...   .+..++|++||..+.......         
T Consensus        86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  156 (265)
T PRK07062         86 GGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHM---------  156 (265)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCc---------
Confidence             47999999986432211      12267888988877777765432   144689999997532211111         


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc--cccccc------cc---c
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP--YLKGAA------EM---Y  233 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~--~~~~~~------~~---~  233 (294)
                                    ..|+.+|.+.+.+.+.++.+   .|+++++++||.+..+.......  ......      ..   .
T Consensus       157 --------------~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (265)
T PRK07062        157 --------------VATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKK  222 (265)
T ss_pred             --------------hHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcC
Confidence                          57999999998888887765   48999999999997664211000  000000      00   0


Q ss_pred             CCCccccccHHHHHHHHHhhhcCc--CCCCeEE
Q 043792          234 EDGVMASVDLRFYVDAHICVFEDV--SSYGRYL  264 (294)
Q Consensus       234 ~~~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~  264 (294)
                      .-....+...+|+|.+++.++...  ..+|+.+
T Consensus       223 ~~p~~r~~~p~~va~~~~~L~s~~~~~~tG~~i  255 (265)
T PRK07062        223 GIPLGRLGRPDEAARALFFLASPLSSYTTGSHI  255 (265)
T ss_pred             CCCcCCCCCHHHHHHHHHHHhCchhcccccceE
Confidence            001112678899999999988643  3355543

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.82  E-value=3.1e-18  Score=140.03  Aligned_cols=205  Identities=13%  Similarity=0.043  Sum_probs=153.0

Q ss_pred             CCCCCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--
Q 043792           20 YDSSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--   97 (294)
Q Consensus        20 ~~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--   97 (294)
                      +..+..++.||||||++.+|+.++.+|+++|.++.+.+.+.+...+..++++.   ..++..+.+|++|.+++.+..+  
T Consensus        32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~---~g~~~~y~cdis~~eei~~~a~~V  108 (300)
T KOG1201|consen   32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRK---IGEAKAYTCDISDREEIYRLAKKV  108 (300)
T ss_pred             chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHh---cCceeEEEecCCCHHHHHHHHHHH
Confidence            44567789999999999999999999999999999999988777665553221   1378999999999988876654  


Q ss_pred             -----cCCEEEecCCCCCCC----Ccch--hhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCC
Q 043792           98 -----GCSGLFYSFEPPSDH----STYD--ELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTS  163 (294)
Q Consensus        98 -----~~d~Vih~a~~~~~~----~~~~--~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~  163 (294)
                           ++|++|||||.....    .+++  ++++++|+.+.....++....   .+-.++|.++|+.+.......     
T Consensus       109 k~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl-----  183 (300)
T KOG1201|consen  109 KKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGL-----  183 (300)
T ss_pred             HHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccc-----
Confidence                 579999999986543    2222  389999999988777765433   144699999998754433222     


Q ss_pred             CCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh------cCCeEEEEecCceeCCCCCCCCccccccccccCCCc
Q 043792          164 HDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD------RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGV  237 (294)
Q Consensus       164 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~------~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~  237 (294)
                                        .+|+.||.++.-+.+.+..+      .|++.+.+.|+.+       ...+.++  .......
T Consensus       184 ------------------~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i-------~Tgmf~~--~~~~~~l  236 (300)
T KOG1201|consen  184 ------------------ADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFI-------NTGMFDG--ATPFPTL  236 (300)
T ss_pred             ------------------hhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeec-------cccccCC--CCCCccc
Confidence                              67999999997777776644      3799999999988       3335554  1122233


Q ss_pred             cccccHHHHHHHHHhhhcCcCC
Q 043792          238 MASVDLRFYVDAHICVFEDVSS  259 (294)
Q Consensus       238 ~~~v~v~D~a~~i~~~~~~~~~  259 (294)
                      ++.+..+.+|+.++.++..+..
T Consensus       237 ~P~L~p~~va~~Iv~ai~~n~~  258 (300)
T KOG1201|consen  237 APLLEPEYVAKRIVEAILTNQA  258 (300)
T ss_pred             cCCCCHHHHHHHHHHHHHcCCc
Confidence            4488899999999999987654

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.82  E-value=2.4e-18  Score=144.19  Aligned_cols=217  Identities=13%  Similarity=0.063  Sum_probs=144.9

Q ss_pred             CCCCeEEEeCCC--chHHHHHHHHHHHCCCeEEEEecCCCC--hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--
Q 043792           24 NATKTVCVMDAS--GHFASALVRRLLLRGYTVHAALHNHGK--LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--   97 (294)
Q Consensus        24 ~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--   97 (294)
                      .++++++||||+  +.||+.++++|+++|++|++..|+.+.  .+...++  .......+.++.+|++|++++.++++  
T Consensus         4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~v~~~~~~~   81 (258)
T PRK07370          4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRE--LTEPLNPSLFLPCDVQDDAQIEETFETI   81 (258)
T ss_pred             cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHH--HHhccCcceEeecCcCCHHHHHHHHHHH
Confidence            456899999986  799999999999999999888765432  2222221  21122346788999999998887764  


Q ss_pred             -----cCCEEEecCCCCCC------CC----cchhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCC
Q 043792           98 -----GCSGLFYSFEPPSD------HS----TYDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNP  161 (294)
Q Consensus        98 -----~~d~Vih~a~~~~~------~~----~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~  161 (294)
                           .+|++|||++....      ..    ...++.+++|+.++..+.+++... ..-.++|++||..+.. +...   
T Consensus        82 ~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~-~~~~---  157 (258)
T PRK07370         82 KQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVR-AIPN---  157 (258)
T ss_pred             HHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccccc-CCcc---
Confidence                 47999999986421      11    111378899999999998887654 1125899999975221 1000   


Q ss_pred             CCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCC---ccccccccccCC
Q 043792          162 TSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISN---PYLKGAAEMYED  235 (294)
Q Consensus       162 ~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~---~~~~~~~~~~~~  235 (294)
                       .                  ..|+.+|.+.+.+.+.++.+.   |++++++.||.+-.+......   ...+......+ 
T Consensus       158 -~------------------~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p-  217 (258)
T PRK07370        158 -Y------------------NVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAP-  217 (258)
T ss_pred             -c------------------chhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCC-
Confidence             1                  679999999999999988764   799999999999765321000   00000000001 


Q ss_pred             CccccccHHHHHHHHHhhhcCc--CCCCeEEeec
Q 043792          236 GVMASVDLRFYVDAHICVFEDV--SSYGRYLCFN  267 (294)
Q Consensus       236 ~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~  267 (294)
                       ...+...+|++.++..++...  ...|+.+..+
T Consensus       218 -~~r~~~~~dva~~~~fl~s~~~~~~tG~~i~vd  250 (258)
T PRK07370        218 -LRRTVTQTEVGNTAAFLLSDLASGITGQTIYVD  250 (258)
T ss_pred             -cCcCCCHHHHHHHHHHHhChhhccccCcEEEEC
Confidence             112777899999999998643  2355544333

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.82  E-value=2.4e-18  Score=144.33  Aligned_cols=216  Identities=14%  Similarity=0.101  Sum_probs=143.4

Q ss_pred             CCCCeEEEeCCCc--hHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           24 NATKTVCVMDASG--HFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        24 ~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      .++++++||||++  .||+.+++.|+++|++|++.+|+....+.+.+   .....+.+.++.+|++|++++.++++    
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~---~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEE---FAAQLGSDIVLPCDVAEDASIDAMFAELGK   80 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHH---HHhccCCceEeecCCCCHHHHHHHHHHHHh
Confidence            3568999999985  89999999999999999988886321222222   22222346788999999998887764    


Q ss_pred             ---cCCEEEecCCCCCCCC---------c--chhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHS---------T--YDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPT  162 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~---------~--~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~  162 (294)
                         .+|++|||||......         .  ..+..+++|+.+...+.+++... ..-.++|++||.++.. +...    
T Consensus        81 ~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~-~~~~----  155 (262)
T PRK07984         81 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER-AIPN----  155 (262)
T ss_pred             hcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCC-CCCC----
Confidence               3699999998643211         1  11267889999988888876533 1125899999875311 1000    


Q ss_pred             CCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc---cccccccccCCC
Q 043792          163 SHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP---YLKGAAEMYEDG  236 (294)
Q Consensus       163 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~---~~~~~~~~~~~~  236 (294)
                      .                  ..|+.+|.+.+.+.+.++.+   +++++.++.||.+..+.......   ..+......+. 
T Consensus       156 ~------------------~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~-  216 (262)
T PRK07984        156 Y------------------NVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI-  216 (262)
T ss_pred             c------------------chhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCC-
Confidence            1                  67999999999999998876   47999999999996542110000   00000001111 


Q ss_pred             ccccccHHHHHHHHHhhhcCc--CCCCeEEeec
Q 043792          237 VMASVDLRFYVDAHICVFEDV--SSYGRYLCFN  267 (294)
Q Consensus       237 ~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~  267 (294)
                       ..+..++|++.++++++...  ...|+.+..+
T Consensus       217 -~r~~~pedva~~~~~L~s~~~~~itG~~i~vd  248 (262)
T PRK07984        217 -RRTVTIEDVGNSAAFLCSDLSAGISGEVVHVD  248 (262)
T ss_pred             -cCCCCHHHHHHHHHHHcCcccccccCcEEEEC
Confidence             12778999999999998753  2356554433

>PRK05855 short chain dehydrogenase; Validated

Probab=99.82  E-value=1.6e-18  Score=161.68  Aligned_cols=209  Identities=12%  Similarity=-0.013  Sum_probs=148.2

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ...++++|||||+|+||++++++|+++|++|++++|+.++.+.+...+  ...+.++.++.+|++|++++.++++     
T Consensus       312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  389 (582)
T PRK05855        312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELI--RAAGAVAHAYRVDVSDADAMEAFAEWVRAE  389 (582)
T ss_pred             cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            345689999999999999999999999999999999876655554422  1223468899999999998887775     


Q ss_pred             --cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---CC-CcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---NT-VDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                        .+|++|||||......      ......+++|+.++.++++++...   .+ -.++|++||.+++......       
T Consensus       390 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~-------  462 (582)
T PRK05855        390 HGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSL-------  462 (582)
T ss_pred             cCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCC-------
Confidence              3799999998754321      112377889999999988875432   12 3589999998643321111       


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccc--------ccc-
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAA--------EMY-  233 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~--------~~~-  233 (294)
                                      ..|+.+|.+.+.+.+.++.+   +|+++++++||.|-.+...... + .+..        ... 
T Consensus       463 ----------------~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~-~~~~~~~~~~~~~~~~  524 (582)
T PRK05855        463 ----------------PAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTR-F-AGADAEDEARRRGRAD  524 (582)
T ss_pred             ----------------cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccc-c-CCcccchhhhHHhhhh
Confidence                            67999999999998888765   4899999999999655422111 0 0000        000 


Q ss_pred             CCCccccccHHHHHHHHHhhhcCcC
Q 043792          234 EDGVMASVDLRFYVDAHICVFEDVS  258 (294)
Q Consensus       234 ~~~~~~~v~v~D~a~~i~~~~~~~~  258 (294)
                      ..........+|+|++++.++.++.
T Consensus       525 ~~~~~~~~~p~~va~~~~~~~~~~~  549 (582)
T PRK05855        525 KLYQRRGYGPEKVAKAIVDAVKRNK  549 (582)
T ss_pred             hhccccCCCHHHHHHHHHHHHHcCC
Confidence            0001113578999999999998653

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.82  E-value=2.5e-18  Score=144.26  Aligned_cols=216  Identities=12%  Similarity=0.019  Sum_probs=143.1

Q ss_pred             CCCCeEEEeCCCc--hHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           24 NATKTVCVMDASG--HFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        24 ~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      .++++++||||++  .||+++++.|+++|++|++..|+....+.+.+   +........++.+|++|++++.++++    
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~---l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~   82 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKP---LAEEIGCNFVSELDVTNPKSISNLFDDIKE   82 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHH---HHHhcCCceEEEccCCCHHHHHHHHHHHHH
Confidence            3468999999997  89999999999999999988876321222222   21111123457899999998887764    


Q ss_pred             ---cCCEEEecCCCCCC-------CC-c--chhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSD-------HS-T--YDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTS  163 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~-------~~-~--~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~  163 (294)
                         ++|++||+++....       .. .  ...+.+++|+.+...+++++... ..-.++|++||.++.. +...    .
T Consensus        83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~-~~~~----~  157 (260)
T PRK06603         83 KWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEK-VIPN----Y  157 (260)
T ss_pred             HcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCcccc-CCCc----c
Confidence               47999999986421       01 1  11278999999999998876543 1125899999975321 1100    1


Q ss_pred             CCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc---cccccccccCCCc
Q 043792          164 HDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP---YLKGAAEMYEDGV  237 (294)
Q Consensus       164 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~---~~~~~~~~~~~~~  237 (294)
                                        ..|+.+|.+.+.+.+.++.+   +|+++.++.||.+-.+.......   ..+......+-  
T Consensus       158 ------------------~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--  217 (260)
T PRK06603        158 ------------------NVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPL--  217 (260)
T ss_pred             ------------------cchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCc--
Confidence                              67999999999999998876   47999999999996653110000   00000001111  


Q ss_pred             cccccHHHHHHHHHhhhcCc--CCCCeEEeec
Q 043792          238 MASVDLRFYVDAHICVFEDV--SSYGRYLCFN  267 (294)
Q Consensus       238 ~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~  267 (294)
                      ..+...+|+|+++++++...  ..+|+.+..+
T Consensus       218 ~r~~~pedva~~~~~L~s~~~~~itG~~i~vd  249 (260)
T PRK06603        218 KRNTTQEDVGGAAVYLFSELSKGVTGEIHYVD  249 (260)
T ss_pred             CCCCCHHHHHHHHHHHhCcccccCcceEEEeC
Confidence            12678999999999999753  3356654443

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.82  E-value=3.6e-18  Score=143.25  Aligned_cols=213  Identities=15%  Similarity=0.083  Sum_probs=142.4

Q ss_pred             CCCCeEEEeCC--CchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           24 NATKTVCVMDA--SGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        24 ~~~~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      .++++++||||  ++.||.++++.|+++|++|++..|.....+.+.+   ..........+.+|++|++++.++++    
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~---~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   80 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITE---FAAEFGSDLVFPCDVASDEQIDALFASLGQ   80 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHH---HHHhcCCcceeeccCCCHHHHHHHHHHHHH
Confidence            45689999996  6799999999999999999988664222222322   11111223468899999998887774    


Q ss_pred             ---cCCEEEecCCCCCCC---------Ccc--hhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDH---------STY--DELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPT  162 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~---------~~~--~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~  162 (294)
                         .+|++|||||.....         ...  .+..+++|+.+...+.+++... .+-.++|++||.++.. +...    
T Consensus        81 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~-~~~~----  155 (260)
T PRK06997         81 HWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER-VVPN----  155 (260)
T ss_pred             HhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEecccccc-CCCC----
Confidence               479999999864321         111  1267899999999998887754 2236899999875321 1000    


Q ss_pred             CCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCcccc-ccc--cccCC-
Q 043792          163 SHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLK-GAA--EMYED-  235 (294)
Q Consensus       163 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~-~~~--~~~~~-  235 (294)
                      .                  ..|+.+|.+.+.+.+.++.+   ++++++++.||.+-.+....   +.. +..  ..... 
T Consensus       156 ~------------------~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~---~~~~~~~~~~~~~~~  214 (260)
T PRK06997        156 Y------------------NTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASG---IKDFGKILDFVESNA  214 (260)
T ss_pred             c------------------chHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhcc---ccchhhHHHHHHhcC
Confidence            1                  67999999999999998876   47999999999986643110   100 000  00000 


Q ss_pred             CccccccHHHHHHHHHhhhcCc--CCCCeEEe
Q 043792          236 GVMASVDLRFYVDAHICVFEDV--SSYGRYLC  265 (294)
Q Consensus       236 ~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~  265 (294)
                      ....+..++|+|++++.++...  ..+|+.+.
T Consensus       215 p~~r~~~pedva~~~~~l~s~~~~~itG~~i~  246 (260)
T PRK06997        215 PLRRNVTIEEVGNVAAFLLSDLASGVTGEITH  246 (260)
T ss_pred             cccccCCHHHHHHHHHHHhCccccCcceeEEE
Confidence            1112678999999999998753  33555433

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.81  E-value=2.7e-18  Score=138.28  Aligned_cols=178  Identities=17%  Similarity=0.078  Sum_probs=132.1

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc---cCCEEE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK---GCSGLF  103 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---~~d~Vi  103 (294)
                      |+++||||+|+||+++++.|.++ ++|++++|+..                   .+.+|++|.++++++++   ++|+||
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~~~id~lv   60 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-------------------DVQVDITDPASIRALFEKVGKVDAVV   60 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------------ceEecCCChHHHHHHHHhcCCCCEEE
Confidence            48999999999999999999999 99999988742                   35679999999988876   579999


Q ss_pred             ecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhh
Q 043792          104 YSFEPPSDHS----T--YDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNL  176 (294)
Q Consensus       104 h~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~  176 (294)
                      |+++......    .  ...+.+++|+.++.++++++.+. .+..+++++||..+..... .    .             
T Consensus        61 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~-~----~-------------  122 (199)
T PRK07578         61 SAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIP-G----G-------------  122 (199)
T ss_pred             ECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCC-C----c-------------
Confidence            9998643221    1  12267889999999999987654 1225799999865321111 1    1             


Q ss_pred             hhhccchhHhhHHHHHHHHHHHHHh--cCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHHHHHHHHhhh
Q 043792          177 CKKFKLWHGLSKTLAEKTAWALAMD--RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVF  254 (294)
Q Consensus       177 ~~~~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~i~~~~  254 (294)
                           ..|+.+|.+.+.+.+.++.+  .++++..++||.+-.+..       ... ..++.  ..++..+|+|++++.++
T Consensus       123 -----~~Y~~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~-------~~~-~~~~~--~~~~~~~~~a~~~~~~~  187 (199)
T PRK07578        123 -----ASAATVNGALEGFVKAAALELPRGIRINVVSPTVLTESLE-------KYG-PFFPG--FEPVPAARVALAYVRSV  187 (199)
T ss_pred             -----hHHHHHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCchh-------hhh-hcCCC--CCCCCHHHHHHHHHHHh
Confidence                 67999999999999988775  589999999998843321       000 01111  12688999999999998


Q ss_pred             cCc
Q 043792          255 EDV  257 (294)
Q Consensus       255 ~~~  257 (294)
                      .+.
T Consensus       188 ~~~  190 (199)
T PRK07578        188 EGA  190 (199)
T ss_pred             ccc
Confidence            754

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.81  E-value=8.9e-18  Score=140.60  Aligned_cols=215  Identities=13%  Similarity=0.015  Sum_probs=142.5

Q ss_pred             CCCCeEEEeCCCc--hHHHHHHHHHHHCCCeEEEEecCCC--------Ch---hhHHHHHhhccCCCCeEEEECCCCChh
Q 043792           24 NATKTVCVMDASG--HFASALVRRLLLRGYTVHAALHNHG--------KL---QCIEEELINYNEEKKLKVFQADPFDYH   90 (294)
Q Consensus        24 ~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~--------~~---~~l~~~~~~~~~~~~v~~~~~Dl~~~~   90 (294)
                      .++++|+||||+|  .||++++++|+++|++|++..|...        ..   ..+.++  ....+.++.++.+|++|.+
T Consensus         4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~D~~~~~   81 (256)
T PRK12859          4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEE--LLKNGVKVSSMELDLTQND   81 (256)
T ss_pred             cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHH--HHhcCCeEEEEEcCCCCHH
Confidence            4578999999995  8999999999999999988754210        01   112221  2223456788999999999


Q ss_pred             HHHHHhc-------cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeee
Q 043792           91 SLVNALK-------GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVW  154 (294)
Q Consensus        91 ~~~~~~~-------~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~  154 (294)
                      ++.++++       .+|++||+++.......      ..+..+++|+.+...+.+++.+.   .+..+||++||..+...
T Consensus        82 ~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~  161 (256)
T PRK12859         82 APKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGP  161 (256)
T ss_pred             HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCC
Confidence            8887774       36999999986432211      11267899999988886554322   13469999999753211


Q ss_pred             CCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCcccccccc
Q 043792          155 NNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAE  231 (294)
Q Consensus       155 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~  231 (294)
                      ...     .                  ..|+.+|.+.+.+.+.++.+   ++++++.++||.+-.+...  .........
T Consensus       162 ~~~-----~------------------~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~--~~~~~~~~~  216 (256)
T PRK12859        162 MVG-----E------------------LAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT--EEIKQGLLP  216 (256)
T ss_pred             CCC-----c------------------hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC--HHHHHHHHh
Confidence            111     1                  67999999999999888766   4899999999998655311  101000001


Q ss_pred             ccCCCccccccHHHHHHHHHhhhcCc--CCCCeEEeec
Q 043792          232 MYEDGVMASVDLRFYVDAHICVFEDV--SSYGRYLCFN  267 (294)
Q Consensus       232 ~~~~~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~  267 (294)
                      ..+  ...+...+|+|++++.++...  ...|+++..+
T Consensus       217 ~~~--~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~d  252 (256)
T PRK12859        217 MFP--FGRIGEPKDAARLIKFLASEEAEWITGQIIHSE  252 (256)
T ss_pred             cCC--CCCCcCHHHHHHHHHHHhCccccCccCcEEEeC
Confidence            111  112667899999999888653  2356655443

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.81  E-value=1.4e-18  Score=146.33  Aligned_cols=207  Identities=16%  Similarity=0.102  Sum_probs=144.0

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++++||||+|+||+++++.|+++|++|++++|+.....           ..++.++.+|++|++++.++++      
T Consensus         7 l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (266)
T PRK06171          7 LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ-----------HENYQFVPTDVSSAEEVNHTVAEIIEKF   75 (266)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc-----------cCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45689999999999999999999999999999998764321           1367889999999998887765      


Q ss_pred             -cCCEEEecCCCCCCC-------------Cc--chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCC
Q 043792           98 -GCSGLFYSFEPPSDH-------------ST--YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHR  158 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~-------------~~--~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~  158 (294)
                       .+|+|||+|+.....             ..  ..+..+++|+.++.++++++.+.   .+..++|++||..+.. +...
T Consensus        76 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-~~~~  154 (266)
T PRK06171         76 GRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLE-GSEG  154 (266)
T ss_pred             CCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccC-CCCC
Confidence             479999999864321             01  11368899999999999887654   1345899999975322 1111


Q ss_pred             CCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCcee-CCCCCCCC-c---cccccc
Q 043792          159 DNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVM-GPDVTISN-P---YLKGAA  230 (294)
Q Consensus       159 ~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~-G~~~~~~~-~---~~~~~~  230 (294)
                          .                  ..|+.+|.+.+.+++.++.+   .++++++++||.+. .+...... .   ...+..
T Consensus       155 ----~------------------~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~  212 (266)
T PRK06171        155 ----Q------------------SCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGIT  212 (266)
T ss_pred             ----C------------------chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCC
Confidence                1                  67999999999999988866   48999999999885 22111000 0   000000


Q ss_pred             -----cccC----CCccccccHHHHHHHHHhhhcCcC--CCCeEE
Q 043792          231 -----EMYE----DGVMASVDLRFYVDAHICVFEDVS--SYGRYL  264 (294)
Q Consensus       231 -----~~~~----~~~~~~v~v~D~a~~i~~~~~~~~--~~~~~~  264 (294)
                           ..+.    .....+...+|+|.++..++....  .+|+.+
T Consensus       213 ~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s~~~~~itG~~i  257 (266)
T PRK06171        213 VEQLRAGYTKTSTIPLGRSGKLSEVADLVCYLLSDRASYITGVTT  257 (266)
T ss_pred             HHHHHhhhcccccccCCCCCCHHHhhhheeeeeccccccceeeEE
Confidence                 0010    011227788999999999986533  345543

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.81  E-value=3.7e-18  Score=143.84  Aligned_cols=213  Identities=16%  Similarity=0.072  Sum_probs=138.8

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecC-CCChhhHHHHHhhccCCCCeEEEECCCCChhHH----HHHh-----
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHN-HGKLQCIEEELINYNEEKKLKVFQADPFDYHSL----VNAL-----   96 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~----~~~~-----   96 (294)
                      +.++||||+|+||+++++.|+++|++|+++.|+ .+..+.+.+++.. ....++.++.+|++|.+++    .+++     
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~   80 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNA-RRPNSAVTCQADLSNSATLFSRCEAIIDACFR   80 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHh-ccCCceEEEEccCCCchhhHHHHHHHHHHHHH
Confidence            579999999999999999999999999998764 3444444332211 1123566789999998754    3333     


Q ss_pred             --ccCCEEEecCCCCCCCC----c-------------chhhhHhHhhHHHHHHHHHHHhcC---------CCcEEEEecC
Q 043792           97 --KGCSGLFYSFEPPSDHS----T-------------YDELTAEVETMAAHNVLEACAQTN---------TVDKVVFTSS  148 (294)
Q Consensus        97 --~~~d~Vih~a~~~~~~~----~-------------~~~~~~~~n~~~~~~ll~~~~~~~---------~~~~~v~~Ss  148 (294)
                        ..+|+||||||......    .             ....++++|+.++..+++++....         +..++|++||
T Consensus        81 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s  160 (267)
T TIGR02685        81 AFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCD  160 (267)
T ss_pred             ccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehh
Confidence              25899999998643211    0             012678999999999988765330         1236777777


Q ss_pred             cceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCcc
Q 043792          149 LTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPY  225 (294)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~  225 (294)
                      ........                 ..      ..|+.+|.+.+.+.+.++.+   .|+++++++||.+..+...... .
T Consensus       161 ~~~~~~~~-----------------~~------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~~~-~  216 (267)
T TIGR02685       161 AMTDQPLL-----------------GF------TMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPFE-V  216 (267)
T ss_pred             hhccCCCc-----------------cc------chhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccchh-H
Confidence            53211000                 01      67999999999999998877   5899999999998765321111 1


Q ss_pred             ccccccccCCCccccccHHHHHHHHHhhhcCc--CCCCeEEe
Q 043792          226 LKGAAEMYEDGVMASVDLRFYVDAHICVFEDV--SSYGRYLC  265 (294)
Q Consensus       226 ~~~~~~~~~~~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~  265 (294)
                      .+......+.+ ..+...+|++++++.++...  ...|+.+.
T Consensus       217 ~~~~~~~~~~~-~~~~~~~~va~~~~~l~~~~~~~~~G~~~~  257 (267)
T TIGR02685       217 QEDYRRKVPLG-QREASAEQIADVVIFLVSPKAKYITGTCIK  257 (267)
T ss_pred             HHHHHHhCCCC-cCCCCHHHHHHHHHHHhCcccCCcccceEE
Confidence            00000011111 12568899999999988654  23555433

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.81  E-value=4.1e-18  Score=143.98  Aligned_cols=219  Identities=21%  Similarity=0.176  Sum_probs=163.4

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEecC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSF  106 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~a  106 (294)
                      |+||||||||++|++++++|+++|++|++++|+++....+.         .++++..+|+.+...+...++++|.++++.
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~---------~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~   71 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA---------GGVEVVLGDLRDPKSLVAGAKGVDGVLLIS   71 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc---------CCcEEEEeccCCHhHHHHHhccccEEEEEe
Confidence            58999999999999999999999999999999987655432         489999999999999999999999999998


Q ss_pred             CCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHh
Q 043792          107 EPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGL  186 (294)
Q Consensus       107 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~  186 (294)
                      +... ...   ...........+..+++. . ++++++++|...+..  ...                       ..|..
T Consensus        72 ~~~~-~~~---~~~~~~~~~~~~~a~~a~-~-~~~~~~~~s~~~~~~--~~~-----------------------~~~~~  120 (275)
T COG0702          72 GLLD-GSD---AFRAVQVTAVVRAAEAAG-A-GVKHGVSLSVLGADA--ASP-----------------------SALAR  120 (275)
T ss_pred             cccc-ccc---chhHHHHHHHHHHHHHhc-C-CceEEEEeccCCCCC--CCc-----------------------cHHHH
Confidence            7654 221   122333444455555544 3 578899988764111  111                       67999


Q ss_pred             hHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCC-CCc-cccccc-cccCCCccccccHHHHHHHHHhhhcCcCCCCe-
Q 043792          187 SKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTI-SNP-YLKGAA-EMYEDGVMASVDLRFYVDAHICVFEDVSSYGR-  262 (294)
Q Consensus       187 sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~-~~~-~~~~~~-~~~~~~~~~~v~v~D~a~~i~~~~~~~~~~~~-  262 (294)
                      +|..+|..+..    .|++++++|+..+|...... ... ...+.+ ...+.+...++..+|++.++..++..+...++ 
T Consensus       121 ~~~~~e~~l~~----sg~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~~~~~~  196 (275)
T COG0702         121 AKAAVEAALRS----SGIPYTTLRRAAFYLGAGAAFIEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPATAGRT  196 (275)
T ss_pred             HHHHHHHHHHh----cCCCeEEEecCeeeeccchhHHHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCcccCcE
Confidence            99999998887    69999999977776544222 111 222322 23344556699999999999999987765554 


Q ss_pred             EEeec-ccccHHHHHHHHHHHhCCCCCC
Q 043792          263 YLCFN-HVINCNEDAMKLARMLLPPSDT  289 (294)
Q Consensus       263 ~~~~~-~~~s~~~~~~~~~~~~~~~~~~  289 (294)
                      |.+.+ +..+..+..+.+....+++...
T Consensus       197 ~~l~g~~~~~~~~~~~~l~~~~gr~~~~  224 (275)
T COG0702         197 YELAGPEALTLAELASGLDYTIGRPVGL  224 (275)
T ss_pred             EEccCCceecHHHHHHHHHHHhCCccee
Confidence            76655 5799999999999999988765

>PRK05599 hypothetical protein; Provisional

Probab=99.81  E-value=1.3e-17  Score=138.67  Aligned_cols=204  Identities=17%  Similarity=0.122  Sum_probs=141.6

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------cC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------GC   99 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~   99 (294)
                      |+++||||++.||..+++.|. +|++|++++|+.++.+.+.+++.. .....+.++.+|+.|.+++.++++       ++
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~-~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   78 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQ-RGATSVHVLSFDAQDLDTHRELVKQTQELAGEI   78 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHh-ccCCceEEEEcccCCHHHHHHHHHHHHHhcCCC
Confidence            579999999999999999998 599999999987776666553311 112347889999999988877654       47


Q ss_pred             CEEEecCCCCCCCC----cc--hhhhHhHhhHHHHHHHHHH----HhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCC
Q 043792          100 SGLFYSFEPPSDHS----TY--DELTAEVETMAAHNVLEAC----AQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDER  169 (294)
Q Consensus       100 d~Vih~a~~~~~~~----~~--~~~~~~~n~~~~~~ll~~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~  169 (294)
                      |++|||+|......    ..  ..+..++|+.+..++++++    .+.+.-.++|++||..+.......           
T Consensus        79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~-----------  147 (246)
T PRK05599         79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRAN-----------  147 (246)
T ss_pred             CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCC-----------
Confidence            99999998753221    11  1255678888877665554    333113589999997533211111           


Q ss_pred             CCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHHH
Q 043792          170 NWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFY  246 (294)
Q Consensus       170 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~  246 (294)
                                  ..|+.+|.+.+.+.+.++.+   .+++++++.||.+..+...       +..+   . . .....+|+
T Consensus       148 ------------~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~-------~~~~---~-~-~~~~pe~~  203 (246)
T PRK05599        148 ------------YVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTT-------GMKP---A-P-MSVYPRDV  203 (246)
T ss_pred             ------------cchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhc-------CCCC---C-C-CCCCHHHH
Confidence                        67999999999999988876   4799999999999765411       1000   0 0 02568999


Q ss_pred             HHHHHhhhcCcCCCCeEEeec
Q 043792          247 VDAHICVFEDVSSYGRYLCFN  267 (294)
Q Consensus       247 a~~i~~~~~~~~~~~~~~~~~  267 (294)
                      |++++.++.++..+..+...+
T Consensus       204 a~~~~~~~~~~~~~~~~~~~~  224 (246)
T PRK05599        204 AAAVVSAITSSKRSTTLWIPG  224 (246)
T ss_pred             HHHHHHHHhcCCCCceEEeCc
Confidence            999999998764433444443

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.80  E-value=8.7e-18  Score=146.86  Aligned_cols=253  Identities=15%  Similarity=0.104  Sum_probs=167.5

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCC---CeEEEEecCCCC---hhhHHHH--------Hhh--ccCCCCeEEEECCCC
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRG---YTVHAALHNHGK---LQCIEEE--------LIN--YNEEKKLKVFQADPF   87 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~---~~~l~~~--------~~~--~~~~~~v~~~~~Dl~   87 (294)
                      ..+++|+|||||||+|.-+++.|+..-   .+++.+.|..+.   .+.+..+        ++.  .....++..+.||+.
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            457999999999999999999999853   478888885432   2232221        111  122357888999997


Q ss_pred             Ch------hHHHHHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCC
Q 043792           88 DY------HSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNP  161 (294)
Q Consensus        88 ~~------~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~  161 (294)
                      ++      .++....+++|+|||+|+......... .....|..|+.++++.|++..+.+-++|+||.-  ....... -
T Consensus        90 ~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~-~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy--~n~~~~~-i  165 (467)
T KOG1221|consen   90 EPDLGISESDLRTLADEVNIVIHSAATVRFDEPLD-VALGINTRGTRNVLQLAKEMVKLKALVHVSTAY--SNCNVGH-I  165 (467)
T ss_pred             CcccCCChHHHHHHHhcCCEEEEeeeeeccchhhh-hhhhhhhHhHHHHHHHHHHhhhhheEEEeehhh--eeccccc-c
Confidence            65      455666778999999999877644432 678899999999999999997889999999963  4332220 0


Q ss_pred             CCCCCCCCCCC--------------------ChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCC
Q 043792          162 TSHDFDERNWS--------------------DVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTI  221 (294)
Q Consensus       162 ~~~~~~e~~~~--------------------~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~  221 (294)
                      .+.++.+-...                    .+.....+++.|.-+|.++|..+...+  .+++++|+||+.|.......
T Consensus       166 ~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~--~~lPivIiRPsiI~st~~EP  243 (467)
T KOG1221|consen  166 EEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA--ENLPLVIIRPSIITSTYKEP  243 (467)
T ss_pred             cccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc--cCCCeEEEcCCceeccccCC
Confidence            01122211100                    001111234889999999999999864  46999999999998776332


Q ss_pred             CCcccc--------------ccc-ccc--CCCccccccHHHHHHHHHhhhcC--cCCC---C-eEEeec---ccccHHHH
Q 043792          222 SNPYLK--------------GAA-EMY--EDGVMASVDLRFYVDAHICVFED--VSSY---G-RYLCFN---HVINCNED  275 (294)
Q Consensus       222 ~~~~~~--------------~~~-~~~--~~~~~~~v~v~D~a~~i~~~~~~--~~~~---~-~~~~~~---~~~s~~~~  275 (294)
                      -..+..              |.. .+.  ++....+|.+|.++.+++.+...  ....   - .|.++.   .++++.++
T Consensus       244 ~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~  323 (467)
T KOG1221|consen  244 FPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDF  323 (467)
T ss_pred             CCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHH
Confidence            211221              111 111  23334489999999998866521  1111   1 476543   36999999


Q ss_pred             HHHHHHH
Q 043792          276 AMKLARM  282 (294)
Q Consensus       276 ~~~~~~~  282 (294)
                      .+...+.
T Consensus       324 ~e~~~~~  330 (467)
T KOG1221|consen  324 IELALRY  330 (467)
T ss_pred             HHHHHHh
Confidence            9988773

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.80  E-value=3.9e-18  Score=140.00  Aligned_cols=166  Identities=18%  Similarity=0.121  Sum_probs=124.0

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----cCC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----GCS  100 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----~~d  100 (294)
                      |++|+||||+|+||++++++|+++|++|++++|++...+.+..   .    .++.++.+|++|++++.++++     ++|
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~---~----~~~~~~~~D~~d~~~~~~~~~~~~~~~id   73 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA---L----PGVHIEKLDMNDPASLDQLLQRLQGQRFD   73 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh---c----cccceEEcCCCCHHHHHHHHHHhhcCCCC
Confidence            4789999999999999999999999999999998876554433   2    367888999999988877775     479


Q ss_pred             EEEecCCCCCCCC--------cchhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCC
Q 043792          101 GLFYSFEPPSDHS--------TYDELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERN  170 (294)
Q Consensus       101 ~Vih~a~~~~~~~--------~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~  170 (294)
                      +|||+++......        ......+++|+.++.++++++...  ++..+++++||..+..    .    ..+.    
T Consensus        74 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~----~----~~~~----  141 (225)
T PRK08177         74 LLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSV----E----LPDG----  141 (225)
T ss_pred             EEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCcccc----c----cCCC----
Confidence            9999988743211        111267889999999999887654  2335788888853111    1    0000    


Q ss_pred             CCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCC
Q 043792          171 WSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPD  218 (294)
Q Consensus       171 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~  218 (294)
                        ...      ..|+.+|.+.+.+++.++.+   .+++++.++||.+-.+.
T Consensus       142 --~~~------~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~  184 (225)
T PRK08177        142 --GEM------PLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDM  184 (225)
T ss_pred             --CCc------cchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCC
Confidence              001      56999999999999998766   36999999999996554

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.80  E-value=1.3e-17  Score=143.54  Aligned_cols=233  Identities=14%  Similarity=0.047  Sum_probs=147.1

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      ++++++||||++.||.++++.|+++| ++|++++|+.++.+.+.+++  .....++.++.+|++|.+++.++++      
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l--~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   79 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSL--GMPKDSYTIMHLDLGSLDSVRQFVQQFRESG   79 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHh--cCCCCeEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            36799999999999999999999999 99999999876655554422  1223467888999999988876653      


Q ss_pred             -cCCEEEecCCCCCCC----C-c--chhhhHhHhhHHHHHHHHHHHhc----C-CCcEEEEecCcceeeeCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDH----S-T--YDELTAEVETMAAHNVLEACAQT----N-TVDKVVFTSSLTAVVWNNHRDNPTSH  164 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~----~-~--~~~~~~~~n~~~~~~ll~~~~~~----~-~~~~~v~~Ss~~~~~~~~~~~~~~~~  164 (294)
                       ++|++|||||.....    . .  ..+..+++|+.++..+++++...    + +..++|++||..+.........+...
T Consensus        80 ~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~  159 (314)
T TIGR01289        80 RPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKA  159 (314)
T ss_pred             CCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcc
Confidence             479999999864321    1 1  12377999999988887765542    1 13699999998643221110000000


Q ss_pred             C----------------CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh----cCCeEEEEecCceeCCCCCCCCc
Q 043792          165 D----------------FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD----RGISMVSINGGLVMGPDVTISNP  224 (294)
Q Consensus       165 ~----------------~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~ilrp~~i~G~~~~~~~~  224 (294)
                      .                ..+.....+.      ..|+.||.+...+.+.++.+    .++.+++++||.|..........
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~  233 (314)
T TIGR01289       160 NLGDLSGLAAGFKAPIAMIDGKEFKGA------KAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHV  233 (314)
T ss_pred             cccccccccccCCCcccccCCCCcchh------hhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCccccccc
Confidence            0                0001111111      57999999988888877754    37999999999995333111100


Q ss_pred             -ccccc-ccccCCCccccccHHHHHHHHHhhhcCcC--CCCeEEe
Q 043792          225 -YLKGA-AEMYEDGVMASVDLRFYVDAHICVFEDVS--SYGRYLC  265 (294)
Q Consensus       225 -~~~~~-~~~~~~~~~~~v~v~D~a~~i~~~~~~~~--~~~~~~~  265 (294)
                       ..... +.........+..+++.|+.++.++....  .+|.|+.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~  278 (314)
T TIGR01289       234 PLFRTLFPPFQKYITKGYVSEEEAGERLAQVVSDPKLKKSGVYWS  278 (314)
T ss_pred             HHHHHHHHHHHHHHhccccchhhhhhhhHHhhcCcccCCCceeee
Confidence             00000 00000001125788999999988776532  3456654

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.80  E-value=1.8e-18  Score=136.50  Aligned_cols=250  Identities=14%  Similarity=0.097  Sum_probs=181.0

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChh--hHHHHHhhc--cCCCCeEEEECCCCChhHHHHHhc-
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQ--CIEEELINY--NEEKKLKVFQADPFDYHSLVNALK-   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~l~~~~~~~--~~~~~v~~~~~Dl~~~~~~~~~~~-   97 (294)
                      ....+..||||-||.=|+.|++.|+.+||+|.++.|+.+...  .+.....-+  ..+.......+|++|...+.+++. 
T Consensus        25 ~r~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~  104 (376)
T KOG1372|consen   25 FRPRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLIST  104 (376)
T ss_pred             cccceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhc
Confidence            345578999999999999999999999999999998765432  222200011  223467888999999999999987 


Q ss_pred             -cCCEEEecCCCCCCCCcch--hhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHSTYD--ELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNW  171 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~~~--~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~  171 (294)
                       +.+-|+|+|+..+...+.+  +...++...|+.+|+++.+.+   .++ ||-..||+  ..||...    +.|.+|.+|
T Consensus       105 ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~V-rfYQAstS--ElyGkv~----e~PQsE~TP  177 (376)
T KOG1372|consen  105 IKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKV-RFYQASTS--ELYGKVQ----EIPQSETTP  177 (376)
T ss_pred             cCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccce-eEEecccH--hhccccc----CCCcccCCC
Confidence             4589999999887665442  366778899999999998877   244 67777777  5888777    779999999


Q ss_pred             CChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-------------cccccc--cccCC-
Q 043792          172 SDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-------------YLKGAA--EMYED-  235 (294)
Q Consensus       172 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-------------~~~~~~--~~~~~-  235 (294)
                      .-|.      ++|+.+|..+-.++-.|.+.+++-.+   -|..|-......+.             +.-|+.  ..+++ 
T Consensus       178 FyPR------SPYa~aKmy~~WivvNyREAYnmfAc---NGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL  248 (376)
T KOG1372|consen  178 FYPR------SPYAAAKMYGYWIVVNYREAYNMFAC---NGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNL  248 (376)
T ss_pred             CCCC------ChhHHhhhhheEEEEEhHHhhcceee---ccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecch
Confidence            8888      99999999987766667666654332   34444333211111             112222  12222 


Q ss_pred             -CccccccHHHHHHHHHhhhcCcCCCCeEEeecccccHHHHHHHHHHHhCCCCC
Q 043792          236 -GVMASVDLRFYVDAHICVFEDVSSYGRYLCFNHVINCNEDAMKLARMLLPPSD  288 (294)
Q Consensus       236 -~~~~~v~v~D~a~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~  288 (294)
                       ....|-|..|.++++...++++......+..++..|.+|+++......|..+.
T Consensus       249 ~a~RDWGhA~dYVEAMW~mLQ~d~PdDfViATge~hsVrEF~~~aF~~ig~~l~  302 (376)
T KOG1372|consen  249 SALRDWGHAGDYVEAMWLMLQQDSPDDFVIATGEQHSVREFCNLAFAEIGEVLN  302 (376)
T ss_pred             hhhcccchhHHHHHHHHHHHhcCCCCceEEecCCcccHHHHHHHHHHhhCcEEe
Confidence             22349999999999999998876654456778899999999998887875543

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.79  E-value=2.1e-17  Score=138.28  Aligned_cols=215  Identities=17%  Similarity=0.122  Sum_probs=144.1

Q ss_pred             CCCCCeEEEeCC--CchHHHHHHHHHHHCCCeEEEEecCCC--ChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-
Q 043792           23 SNATKTVCVMDA--SGHFASALVRRLLLRGYTVHAALHNHG--KLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-   97 (294)
Q Consensus        23 ~~~~~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~--~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-   97 (294)
                      ..++++++||||  ++.||.++++.|+++|++|++++|+..  ..+.+.++     ...++.++.+|++|++++.++++ 
T Consensus         4 ~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~~~i~~~~~~   78 (256)
T PRK07889          4 LLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKR-----LPEPAPVLELDVTNEEHLASLADR   78 (256)
T ss_pred             cccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHh-----cCCCCcEEeCCCCCHHHHHHHHHH
Confidence            345689999999  899999999999999999999987642  22333331     12257789999999988877764 


Q ss_pred             ------cCCEEEecCCCCCC-------CCcch---hhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCC
Q 043792           98 ------GCSGLFYSFEPPSD-------HSTYD---ELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDN  160 (294)
Q Consensus        98 ------~~d~Vih~a~~~~~-------~~~~~---~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~  160 (294)
                            ++|++|||||....       .....   .+.+++|+.++..+.+++... ..-.++|++|+.+. . +...  
T Consensus        79 ~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~-~-~~~~--  154 (256)
T PRK07889         79 VREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDAT-V-AWPA--  154 (256)
T ss_pred             HHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeeccc-c-cCCc--
Confidence                  47999999986421       11111   267899999999888887654 12257888876431 1 1000  


Q ss_pred             CCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCcccccccccc-CCC
Q 043792          161 PTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMY-EDG  236 (294)
Q Consensus       161 ~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~-~~~  236 (294)
                        .                  ..|+.+|.+.+.+.+.++.+   +|+++.++.||.+..+........ ......+ ...
T Consensus       155 --~------------------~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~  213 (256)
T PRK07889        155 --Y------------------DWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGF-ELLEEGWDERA  213 (256)
T ss_pred             --c------------------chhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCc-HHHHHHHHhcC
Confidence              1                  56999999999999988876   479999999999976542110000 0000000 011


Q ss_pred             cc--ccccHHHHHHHHHhhhcCc--CCCCeEEeec
Q 043792          237 VM--ASVDLRFYVDAHICVFEDV--SSYGRYLCFN  267 (294)
Q Consensus       237 ~~--~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~  267 (294)
                      ..  .+...+|+|++++.++...  ...|+++..+
T Consensus       214 p~~~~~~~p~evA~~v~~l~s~~~~~~tG~~i~vd  248 (256)
T PRK07889        214 PLGWDVKDPTPVARAVVALLSDWFPATTGEIVHVD  248 (256)
T ss_pred             ccccccCCHHHHHHHHHHHhCcccccccceEEEEc
Confidence            11  2678999999999998753  3356654443

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.79  E-value=5.6e-18  Score=141.85  Aligned_cols=200  Identities=15%  Similarity=0.067  Sum_probs=140.4

Q ss_pred             eEEEeCCCchHHHHHHHHHHH----CCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc-----
Q 043792           28 TVCVMDASGHFASALVRRLLL----RGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG-----   98 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-----   98 (294)
                      .++||||+|.||.+++++|++    +|++|+++.|+.+..+.+.+++.......++.++.+|++|.+++.++++.     
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            589999999999999999997    79999999998776666655432111234688899999999988777642     


Q ss_pred             ------CCEEEecCCCCCCC----C--cc---hhhhHhHhhHHHHHHHHHHHhc----CC-CcEEEEecCcceeeeCCCC
Q 043792           99 ------CSGLFYSFEPPSDH----S--TY---DELTAEVETMAAHNVLEACAQT----NT-VDKVVFTSSLTAVVWNNHR  158 (294)
Q Consensus        99 ------~d~Vih~a~~~~~~----~--~~---~~~~~~~n~~~~~~ll~~~~~~----~~-~~~~v~~Ss~~~~~~~~~~  158 (294)
                            .|+||||||.....    .  ..   .++.+++|+.++..+.+++.+.    ++ ..++|++||.++.......
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~~  161 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGW  161 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCCc
Confidence                  15899999864221    1  11   1378999999988887776543    12 2589999997532211111


Q ss_pred             CCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccc--cc---
Q 043792          159 DNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKG--AA---  230 (294)
Q Consensus       159 ~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~--~~---  230 (294)
                                             ..|+.+|.+.+.+.+.++.+   .+++++++.||.+-.+....   ....  .+   
T Consensus       162 -----------------------~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~---~~~~~~~~~~~  215 (256)
T TIGR01500       162 -----------------------ALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQ---VREESVDPDMR  215 (256)
T ss_pred             -----------------------hHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHH---HHHhcCChhHH
Confidence                                   67999999999999998776   47999999999996553110   0000  00   


Q ss_pred             ----cccCCCccccccHHHHHHHHHhhhc
Q 043792          231 ----EMYEDGVMASVDLRFYVDAHICVFE  255 (294)
Q Consensus       231 ----~~~~~~~~~~v~v~D~a~~i~~~~~  255 (294)
                          ...+.+  .+..++|+|.+++.++.
T Consensus       216 ~~~~~~~~~~--~~~~p~eva~~~~~l~~  242 (256)
T TIGR01500       216 KGLQELKAKG--KLVDPKVSAQKLLSLLE  242 (256)
T ss_pred             HHHHHHHhcC--CCCCHHHHHHHHHHHHh
Confidence                000111  27789999999999985

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.79  E-value=2.8e-17  Score=144.31  Aligned_cols=189  Identities=20%  Similarity=0.091  Sum_probs=128.7

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      +.++|+|+||||+|+||+++++.|+++|++|++++|+.++......     .....+..+.+|++|.+++.+.+.++|++
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~-----~~~~~v~~v~~Dvsd~~~v~~~l~~IDiL  249 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEIN-----GEDLPVKTLHWQVGQEAALAELLEKVDIL  249 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-----hcCCCeEEEEeeCCCHHHHHHHhCCCCEE
Confidence            3457899999999999999999999999999999987644322111     11234678899999999999999999999


Q ss_pred             EecCCCCCCCCcc---hhhhHhHhhHHHHHHHHHHHhc---CC---Cc-EEEEecCcceeeeCCCCCCCCCCCCCCCCCC
Q 043792          103 FYSFEPPSDHSTY---DELTAEVETMAAHNVLEACAQT---NT---VD-KVVFTSSLTAVVWNNHRDNPTSHDFDERNWS  172 (294)
Q Consensus       103 ih~a~~~~~~~~~---~~~~~~~n~~~~~~ll~~~~~~---~~---~~-~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~  172 (294)
                      |||||........   .++.+++|+.++.++++++.+.   .+   .+ .+|++|+.  .... ..    .         
T Consensus       250 InnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa--~~~~-~~----~---------  313 (406)
T PRK07424        250 IINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEA--EVNP-AF----S---------  313 (406)
T ss_pred             EECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEccc--cccC-CC----c---------
Confidence            9999865332222   2378999999999999987543   11   12 34555432  1111 00    0         


Q ss_pred             ChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHHHHHHHHh
Q 043792          173 DVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHIC  252 (294)
Q Consensus       173 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~i~~  252 (294)
                               ..|+.||.+.+.+......+.+..+..+.|+.+-.+       +       .   ....+..+|+|+.++.
T Consensus       314 ---------~~Y~ASKaAl~~l~~l~~~~~~~~I~~i~~gp~~t~-------~-------~---~~~~~spe~vA~~il~  367 (406)
T PRK07424        314 ---------PLYELSKRALGDLVTLRRLDAPCVVRKLILGPFKSN-------L-------N---PIGVMSADWVAKQILK  367 (406)
T ss_pred             ---------hHHHHHHHHHHHHHHHHHhCCCCceEEEEeCCCcCC-------C-------C---cCCCCCHHHHHHHHHH
Confidence                     469999999988764333334555555555443111       1       0   0124688999999999


Q ss_pred             hhcCcC
Q 043792          253 VFEDVS  258 (294)
Q Consensus       253 ~~~~~~  258 (294)
                      +++++.
T Consensus       368 ~i~~~~  373 (406)
T PRK07424        368 LAKRDF  373 (406)
T ss_pred             HHHCCC
Confidence            997653

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.78  E-value=3.1e-17  Score=136.10  Aligned_cols=185  Identities=15%  Similarity=0.075  Sum_probs=126.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      .++++++||||+|+||+++++.|+++|++|++++|+....  +..   .. . .....+.+|++|.+++.+.+.++|++|
T Consensus        12 l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~--~~~---~~-~-~~~~~~~~D~~~~~~~~~~~~~iDilV   84 (245)
T PRK12367         12 WQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINN--SES---ND-E-SPNEWIKWECGKEESLDKQLASLDVLI   84 (245)
T ss_pred             hCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhh--hhh---hc-c-CCCeEEEeeCCCHHHHHHhcCCCCEEE
Confidence            3568999999999999999999999999999999876221  111   11 1 123577899999999999888999999


Q ss_pred             ecCCCCCCCCc---chhhhHhHhhHHHHHHHHHHHhc--C----CCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCCh
Q 043792          104 YSFEPPSDHST---YDELTAEVETMAAHNVLEACAQT--N----TVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDV  174 (294)
Q Consensus       104 h~a~~~~~~~~---~~~~~~~~n~~~~~~ll~~~~~~--~----~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~  174 (294)
                      ||||.......   ...+.+++|+.++.++++++...  .    +-..++..||.+... +. .    .           
T Consensus        85 nnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~-~~-~----~-----------  147 (245)
T PRK12367         85 LNHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQ-PA-L----S-----------  147 (245)
T ss_pred             ECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccC-CC-C----C-----------
Confidence            99986432222   22378999999999999987643  1    112344444432111 10 1    1           


Q ss_pred             hhhhhccchhHhhHHHHHHHHHHHHH-------hcCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHHHH
Q 043792          175 NLCKKFKLWHGLSKTLAEKTAWALAM-------DRGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYV  247 (294)
Q Consensus       175 ~~~~~~~~~Y~~sK~~~e~~~~~~~~-------~~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a  247 (294)
                             ..|+.||.+.+.+. .+..       +.++.+..+.||.+..+.       .       +   ..++..+|+|
T Consensus       148 -------~~Y~aSKaal~~~~-~l~~~l~~e~~~~~i~v~~~~pg~~~t~~-------~-------~---~~~~~~~~vA  202 (245)
T PRK12367        148 -------PSYEISKRLIGQLV-SLKKNLLDKNERKKLIIRKLILGPFRSEL-------N-------P---IGIMSADFVA  202 (245)
T ss_pred             -------chhHHHHHHHHHHH-HHHHHHHHhhcccccEEEEecCCCccccc-------C-------c---cCCCCHHHHH
Confidence                   56999999975433 2322       347888888887753221       0       0   1156789999


Q ss_pred             HHHHhhhcCc
Q 043792          248 DAHICVFEDV  257 (294)
Q Consensus       248 ~~i~~~~~~~  257 (294)
                      +.++.++.++
T Consensus       203 ~~i~~~~~~~  212 (245)
T PRK12367        203 KQILDQANLG  212 (245)
T ss_pred             HHHHHHHhcC
Confidence            9999998754

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.78  E-value=9.2e-17  Score=132.70  Aligned_cols=200  Identities=13%  Similarity=0.090  Sum_probs=137.0

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHh---ccCCE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNAL---KGCSG  101 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~---~~~d~  101 (294)
                      |+|+||||+|+||++++++|+++|  +.|....|+....  .        ...++.++++|+++.++++++.   .++|+
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--~--------~~~~~~~~~~Dls~~~~~~~~~~~~~~id~   70 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--F--------QHDNVQWHALDVTDEAEIKQLSEQFTQLDW   70 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--c--------ccCceEEEEecCCCHHHHHHHHHhcCCCCE
Confidence            589999999999999999999985  5565555644221  1        1247889999999998876654   46899


Q ss_pred             EEecCCCCCCCC---------cc---hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792          102 LFYSFEPPSDHS---------TY---DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus       102 Vih~a~~~~~~~---------~~---~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                      ||||+|......         .+   ....+++|+.++..+++++...   .+..+++++||........        + 
T Consensus        71 li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~--------~-  141 (235)
T PRK09009         71 LINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDN--------R-  141 (235)
T ss_pred             EEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccC--------C-
Confidence            999998754210         01   1267889999998888877654   2346899998742111100        0 


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh-----cCCeEEEEecCceeCCCCCCCCccccccccccCCCccccc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD-----RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASV  241 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v  241 (294)
                           ..+.      ..|+.+|.+.+.+.+.++.+     .++++.++.||.+..+....   +..    ..+  ...++
T Consensus       142 -----~~~~------~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~---~~~----~~~--~~~~~  201 (235)
T PRK09009        142 -----LGGW------YSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKP---FQQ----NVP--KGKLF  201 (235)
T ss_pred             -----CCCc------chhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcc---hhh----ccc--cCCCC
Confidence                 0011      57999999999999988865     37899999999997665211   111    011  11267


Q ss_pred             cHHHHHHHHHhhhcCcC--CCCeEEe
Q 043792          242 DLRFYVDAHICVFEDVS--SYGRYLC  265 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~~--~~~~~~~  265 (294)
                      ..+|+|++++.++....  ..|.++.
T Consensus       202 ~~~~~a~~~~~l~~~~~~~~~g~~~~  227 (235)
T PRK09009        202 TPEYVAQCLLGIIANATPAQSGSFLA  227 (235)
T ss_pred             CHHHHHHHHHHHHHcCChhhCCcEEe
Confidence            89999999999997653  3555543

>PRK06484 short chain dehydrogenase; Validated

Probab=99.77  E-value=3.2e-17  Score=150.90  Aligned_cols=200  Identities=17%  Similarity=0.067  Sum_probs=144.2

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------   97 (294)
                      ++++++||||++.||..+++.|+++|++|++++|+.+..+.+..++     ..++.++.+|++|++++.++++       
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL-----GPDHHALAMDVSDEAQIREGFEQLHREFG   78 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEeccCCHHHHHHHHHHHHHHhC
Confidence            4689999999999999999999999999999999876655554421     2367789999999998877764       


Q ss_pred             cCCEEEecCCCCCC------CCc--chhhhHhHhhHHHHHHHHHHHhc---CCC-cEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 GCSGLFYSFEPPSD------HST--YDELTAEVETMAAHNVLEACAQT---NTV-DKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 ~~d~Vih~a~~~~~------~~~--~~~~~~~~n~~~~~~ll~~~~~~---~~~-~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                      .+|++||||+....      ...  ..+..+++|+.++..+++++...   .+- .++|++||..+.......       
T Consensus        79 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~-------  151 (520)
T PRK06484         79 RIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKR-------  151 (520)
T ss_pred             CCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCC-------
Confidence            47999999986321      111  12378999999999998887654   122 389999997533211111       


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCcccccc--c----cccCCC
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGA--A----EMYEDG  236 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~--~----~~~~~~  236 (294)
                                      ..|+.+|.+.+.+.+.++.+   .++++++++||.+..+......  -.+.  .    ...+. 
T Consensus       152 ----------------~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~-  212 (520)
T PRK06484        152 ----------------TAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELE--RAGKLDPSAVRSRIPL-  212 (520)
T ss_pred             ----------------chHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhc--ccchhhhHHHHhcCCC-
Confidence                            67999999999999988876   3799999999988665421100  0000  0    01111 


Q ss_pred             ccccccHHHHHHHHHhhhcC
Q 043792          237 VMASVDLRFYVDAHICVFED  256 (294)
Q Consensus       237 ~~~~v~v~D~a~~i~~~~~~  256 (294)
                       ..+...+|+|+++++++..
T Consensus       213 -~~~~~~~~va~~v~~l~~~  231 (520)
T PRK06484        213 -GRLGRPEEIAEAVFFLASD  231 (520)
T ss_pred             -CCCcCHHHHHHHHHHHhCc
Confidence             1256889999999988864

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.76  E-value=4.5e-17  Score=128.23  Aligned_cols=162  Identities=20%  Similarity=0.111  Sum_probs=120.7

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHH---HHHhhccCCCCeEEEECCCCChhHHHHHhcc----
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIE---EELINYNEEKKLKVFQADPFDYHSLVNALKG----   98 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~---~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~----   98 (294)
                      ++++||||+|+||.++++.|+++|. .|+++.|+........   .+  ......++.++.+|+++++++.+++..    
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   78 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAE--LEALGAEVTVVACDVADRAALAAALAAIPAR   78 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHH--HHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4799999999999999999999996 6888888765433211   11  222344677899999999888777643    


Q ss_pred             ---CCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCC
Q 043792           99 ---CSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDER  169 (294)
Q Consensus        99 ---~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~  169 (294)
                         +|.|||+++......      ...+.++++|+.++.++++++.+. +.+++|++||.++. ++...    .      
T Consensus        79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~ii~~ss~~~~-~~~~~----~------  146 (180)
T smart00822       79 LGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL-PLDFFVLFSSVAGV-LGNPG----Q------  146 (180)
T ss_pred             cCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC-CcceEEEEccHHHh-cCCCC----c------
Confidence               699999998643221      112377899999999999999777 77899999997632 22211    1      


Q ss_pred             CCCChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCcee
Q 043792          170 NWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVM  215 (294)
Q Consensus       170 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~  215 (294)
                                  ..|+.+|...+.+++.+ ...+++++++.||.+-
T Consensus       147 ------------~~y~~sk~~~~~~~~~~-~~~~~~~~~~~~g~~~  179 (180)
T smart00822      147 ------------ANYAAANAFLDALAAHR-RARGLPATSINWGAWA  179 (180)
T ss_pred             ------------hhhHHHHHHHHHHHHHH-HhcCCceEEEeecccc
Confidence                        67999999999998654 4568999999988763

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.6e-16  Score=136.08  Aligned_cols=221  Identities=14%  Similarity=0.040  Sum_probs=143.9

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC----------ChhhHHHHHhhccCCCCeEEEECCCCChhHH
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG----------KLQCIEEELINYNEEKKLKVFQADPFDYHSL   92 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~----------~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~   92 (294)
                      +.++++++||||++.||.++++.|+++|++|++++|+..          ..+.+.++  +.....++.++.+|++|++++
T Consensus         5 ~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~Dv~~~~~v   82 (305)
T PRK08303          5 PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAEL--VTAAGGRGIAVQVDHLVPEQV   82 (305)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHH--HHhcCCceEEEEcCCCCHHHH
Confidence            456789999999999999999999999999999999742          22333332  112234577899999999888


Q ss_pred             HHHhc-------cCCEEEecC-CCCC-----CC--C---cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcce
Q 043792           93 VNALK-------GCSGLFYSF-EPPS-----DH--S---TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTA  151 (294)
Q Consensus        93 ~~~~~-------~~d~Vih~a-~~~~-----~~--~---~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~  151 (294)
                      +++++       ++|++|||+ +...     ..  .   ....+.+++|+.+...+++++...   ++-.++|++||..+
T Consensus        83 ~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~  162 (305)
T PRK08303         83 RALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTA  162 (305)
T ss_pred             HHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccc
Confidence            77764       479999999 6321     10  0   111267888999888887776543   13368999998642


Q ss_pred             eeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccc
Q 043792          152 VVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKG  228 (294)
Q Consensus       152 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~  228 (294)
                      .. ....       .      ...      ..|+.+|.+...+.+.++.+.   |+++.+|.||.|-.+...........
T Consensus       163 ~~-~~~~-------~------~~~------~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~  222 (305)
T PRK08303        163 EY-NATH-------Y------RLS------VFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEE  222 (305)
T ss_pred             cc-cCcC-------C------CCc------chhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCcc
Confidence            11 1000       0      000      569999999999998888764   79999999999865531000000000


Q ss_pred             cc-cccC-CC-ccccccHHHHHHHHHhhhcCcC---CCCeEEe
Q 043792          229 AA-EMYE-DG-VMASVDLRFYVDAHICVFEDVS---SYGRYLC  265 (294)
Q Consensus       229 ~~-~~~~-~~-~~~~v~v~D~a~~i~~~~~~~~---~~~~~~~  265 (294)
                      .. .... .. ...+...+|+|.+++.++..+.   .+|+++.
T Consensus       223 ~~~~~~~~~p~~~~~~~peevA~~v~fL~s~~~~~~itG~~l~  265 (305)
T PRK08303        223 NWRDALAKEPHFAISETPRYVGRAVAALAADPDVARWNGQSLS  265 (305)
T ss_pred             chhhhhccccccccCCCHHHHHHHHHHHHcCcchhhcCCcEEE
Confidence            00 0000 01 1114578999999999987542   3566544

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.75  E-value=2.3e-16  Score=142.64  Aligned_cols=212  Identities=15%  Similarity=0.039  Sum_probs=141.5

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++++||||+|+||..+++.|+++|++|++++++... +.+.+   ... .-+..++.+|++|.+++.++++      
T Consensus       208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~-~~l~~---~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  282 (450)
T PRK08261        208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAG-EALAA---VAN-RVGGTALALDITAPDAPARIAEHLAERH  282 (450)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHH---HHH-HcCCeEEEEeCCCHHHHHHHHHHHHHhC
Confidence            457899999999999999999999999999999885322 22222   100 0134678899999988877664      


Q ss_pred             -cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                       ++|+|||+++......      ...+..+++|+.++.++.+++...   ..-.+||++||..++. +...    .    
T Consensus       283 g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~-g~~~----~----  353 (450)
T PRK08261        283 GGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIA-GNRG----Q----  353 (450)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcC-CCCC----C----
Confidence             4799999998754321      112377899999999999998764   1226899999976322 2211    1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHH
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLR  244 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~  244 (294)
                                    ..|+.+|...+.+++.++.+   .++++.++.||.+-.+...............+ .........+
T Consensus       354 --------------~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~-~~l~~~~~p~  418 (450)
T PRK08261        354 --------------TNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPFATREAGRRM-NSLQQGGLPV  418 (450)
T ss_pred             --------------hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchhHHHHHhhc-CCcCCCCCHH
Confidence                          67999999888888887755   48999999999885432110000000000000 0111134568


Q ss_pred             HHHHHHHhhhcCc--CCCCeEE
Q 043792          245 FYVDAHICVFEDV--SSYGRYL  264 (294)
Q Consensus       245 D~a~~i~~~~~~~--~~~~~~~  264 (294)
                      |+|+++.+++...  ..+|+.+
T Consensus       419 dva~~~~~l~s~~~~~itG~~i  440 (450)
T PRK08261        419 DVAETIAWLASPASGGVTGNVV  440 (450)
T ss_pred             HHHHHHHHHhChhhcCCCCCEE
Confidence            9999999988643  2345543

>PLN00015 protochlorophyllide reductase

Probab=99.74  E-value=1.7e-16  Score=136.39  Aligned_cols=233  Identities=15%  Similarity=0.037  Sum_probs=141.7

Q ss_pred             EEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------cCCE
Q 043792           30 CVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------GCSG  101 (294)
Q Consensus        30 lItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~d~  101 (294)
                      +||||++.||.++++.|+++| ++|++.+|+.++.+.+..++  .....++.++.+|++|.+++.++++       .+|+
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l--~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~   78 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSA--GMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDV   78 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh--cCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCE
Confidence            599999999999999999999 99999999876555444422  1223467888999999998877764       4799


Q ss_pred             EEecCCCCCCC----C-c--chhhhHhHhhHHHHHHHHHHHhc---CC--CcEEEEecCcceeeeCCCC-CCCCC-----
Q 043792          102 LFYSFEPPSDH----S-T--YDELTAEVETMAAHNVLEACAQT---NT--VDKVVFTSSLTAVVWNNHR-DNPTS-----  163 (294)
Q Consensus       102 Vih~a~~~~~~----~-~--~~~~~~~~n~~~~~~ll~~~~~~---~~--~~~~v~~Ss~~~~~~~~~~-~~~~~-----  163 (294)
                      +||||+.....    . .  ..+..+++|+.++..+++++.+.   .+  ..++|++||..+....... ..+..     
T Consensus        79 lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~  158 (308)
T PLN00015         79 LVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDL  158 (308)
T ss_pred             EEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhh
Confidence            99999864321    1 1  12378999999988887765543   13  4699999997532110000 00000     


Q ss_pred             ----CCCCCCCCC---ChhhhhhccchhHhhHHHHHHHHHHHHHh----cCCeEEEEecCceeCCCCCCCC-cccccccc
Q 043792          164 ----HDFDERNWS---DVNLCKKFKLWHGLSKTLAEKTAWALAMD----RGISMVSINGGLVMGPDVTISN-PYLKGAAE  231 (294)
Q Consensus       164 ----~~~~e~~~~---~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~ilrp~~i~G~~~~~~~-~~~~~~~~  231 (294)
                          ....+....   ... .......|+.||.+.+.+.+.++.+    .|+.+++++||.|......... ...+....
T Consensus       159 ~~~~~~~~~~~~~~~~~~~-~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~  237 (308)
T PLN00015        159 RGLAGGLNGLNSSAMIDGG-EFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFP  237 (308)
T ss_pred             hhhhcccCCccchhhcccc-CCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHH
Confidence                000000000   000 0001167999999977776777665    3799999999999643321110 00000000


Q ss_pred             -ccCCCccccccHHHHHHHHHhhhcCcC--CCCeEEe
Q 043792          232 -MYEDGVMASVDLRFYVDAHICVFEDVS--SYGRYLC  265 (294)
Q Consensus       232 -~~~~~~~~~v~v~D~a~~i~~~~~~~~--~~~~~~~  265 (294)
                       ........+..+++.|+.++.++....  .+|.|+.
T Consensus       238 ~~~~~~~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~  274 (308)
T PLN00015        238 PFQKYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWS  274 (308)
T ss_pred             HHHHHHhcccccHHHhhhhhhhhccccccCCCccccc
Confidence             000001125678999999998876532  3566653

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.74  E-value=3.9e-16  Score=128.13  Aligned_cols=196  Identities=10%  Similarity=0.018  Sum_probs=136.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++++||||++.||+.+++.|+++|++|++++|+.+..+.+.+++  .....++..+.+|+.|+++++++++      
T Consensus         3 ~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (227)
T PRK08862          3 IKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQC--SALTDNVYSFQLKDFSQESIRHLFDAIEQQF   80 (227)
T ss_pred             CCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHH--HhcCCCeEEEEccCCCHHHHHHHHHHHHHHh
Confidence            45689999999999999999999999999999999887766555432  1223457788899999988876653      


Q ss_pred             --cCCEEEecCCCCCCC----Ccch---hhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDH----STYD---ELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPTSH  164 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~----~~~~---~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  164 (294)
                        ++|++|||++.....    ....   .+.+++|+.+...+++++.    +.++-.++|++||....  .  .    . 
T Consensus        81 g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~--~--~----~-  151 (227)
T PRK08862         81 NRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH--Q--D----L-  151 (227)
T ss_pred             CCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC--C--C----c-
Confidence              579999999742211    1111   2566778887776665543    32123589999985311  0  0    1 


Q ss_pred             CCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCCCccccc
Q 043792          165 DFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASV  241 (294)
Q Consensus       165 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v  241 (294)
                                       ..|+.+|.+.+.+.+.++.+   +++++..+.||.+-.+...     .          ...|-
T Consensus       152 -----------------~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~-----~----------~~~~~  199 (227)
T PRK08862        152 -----------------TGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGEL-----D----------AVHWA  199 (227)
T ss_pred             -----------------chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCcc-----C----------HHHHH
Confidence                             57999999999999988875   4799999999988555310     0          00122


Q ss_pred             cH-HHHHHHHHhhhcCcCCCCe
Q 043792          242 DL-RFYVDAHICVFEDVSSYGR  262 (294)
Q Consensus       242 ~v-~D~a~~i~~~~~~~~~~~~  262 (294)
                      .+ +|++.+...++.++...|+
T Consensus       200 ~~~~~~~~~~~~l~~~~~~tg~  221 (227)
T PRK08862        200 EIQDELIRNTEYIVANEYFSGR  221 (227)
T ss_pred             HHHHHHHhheeEEEecccccce
Confidence            22 7888888888865444443

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.73  E-value=2.5e-15  Score=125.60  Aligned_cols=222  Identities=16%  Similarity=0.056  Sum_probs=152.4

Q ss_pred             CCCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhh-ccCCCCeEEEECCCCChhHHHHHhc---
Q 043792           22 SSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELIN-YNEEKKLKVFQADPFDYHSLVNALK---   97 (294)
Q Consensus        22 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~-~~~~~~v~~~~~Dl~~~~~~~~~~~---   97 (294)
                      ....+|.++||||+..||+.+|+.|++.|.+|++.+|+.+..+....++.. .....++..+.+|+++.++.+++++   
T Consensus         4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~   83 (270)
T KOG0725|consen    4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV   83 (270)
T ss_pred             ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence            356789999999999999999999999999999999998776554443211 1223568899999998876665543   


Q ss_pred             -----cCCEEEecCCCCCCCCc-------chhhhHhHhhHH-HHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCC
Q 043792           98 -----GCSGLFYSFEPPSDHST-------YDELTAEVETMA-AHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNP  161 (294)
Q Consensus        98 -----~~d~Vih~a~~~~~~~~-------~~~~~~~~n~~~-~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~  161 (294)
                           ++|++|++|+.......       ..+..+++|+.| ...+.+++...   ++-..++++||.+....+...   
T Consensus        84 ~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~---  160 (270)
T KOG0725|consen   84 EKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGS---  160 (270)
T ss_pred             HHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCC---
Confidence                 47999999887554321       113889999995 66666665544   244678898887533322111   


Q ss_pred             CCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc------cccc--cc
Q 043792          162 TSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP------YLKG--AA  230 (294)
Q Consensus       162 ~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~------~~~~--~~  230 (294)
                       .                  ..|+.+|.+.+++.+..+.+   +|+++.++-||.|..+.......      +.+.  ..
T Consensus       161 -~------------------~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~  221 (270)
T KOG0725|consen  161 -G------------------VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSK  221 (270)
T ss_pred             -c------------------ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccc
Confidence             0                  36999999999999998876   48999999999998876111100      1111  00


Q ss_pred             cccCCCccccccHHHHHHHHHhhhcCcC--CCCeEEeec
Q 043792          231 EMYEDGVMASVDLRFYVDAHICVFEDVS--SYGRYLCFN  267 (294)
Q Consensus       231 ~~~~~~~~~~v~v~D~a~~i~~~~~~~~--~~~~~~~~~  267 (294)
                      ...+.+.  +.-.+|+|.++..++....  ..|+-++.+
T Consensus       222 ~~~p~gr--~g~~~eva~~~~fla~~~asyitG~~i~vd  258 (270)
T KOG0725|consen  222 GAVPLGR--VGTPEEVAEAAAFLASDDASYITGQTIIVD  258 (270)
T ss_pred             cccccCC--ccCHHHHHHhHHhhcCcccccccCCEEEEe
Confidence            1112222  7778999999998886643  344444433

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.71  E-value=2.2e-16  Score=123.44  Aligned_cols=149  Identities=24%  Similarity=0.143  Sum_probs=115.3

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecC--CCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           27 KTVCVMDASGHFASALVRRLLLRG-YTVHAALHN--HGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~--~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      |+++||||+|.||+.+++.|+++| +.|+++.|+  .+..+.+..++  .....++.++++|+++.++++.+++      
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQEL--KAPGAKITFIECDLSDPESIRALIEEVIKRF   78 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHH--HHTTSEEEEEESETTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccc--ccccccccccccccccccccccccccccccc
Confidence            579999999999999999999995 577777888  33334443332  2344789999999999988887765      


Q ss_pred             -cCCEEEecCCCCCCCCcch------hhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHSTYD------ELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERN  170 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~~~------~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~  170 (294)
                       .+|++|||++........+      .+++++|+.+...+.+++... +-.++|++||..... +...    .       
T Consensus        79 ~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~g~iv~~sS~~~~~-~~~~----~-------  145 (167)
T PF00106_consen   79 GPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQ-GGGKIVNISSIAGVR-GSPG----M-------  145 (167)
T ss_dssp             SSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHH-TTEEEEEEEEGGGTS-SSTT----B-------
T ss_pred             ccccccccccccccccccccccchhhhhccccccceeeeeeehheec-cccceEEecchhhcc-CCCC----C-------
Confidence             4699999999866332221      288999999999999999885 667999999986332 1111    1       


Q ss_pred             CCChhhhhhccchhHhhHHHHHHHHHHHHHh
Q 043792          171 WSDVNLCKKFKLWHGLSKTLAEKTAWALAMD  201 (294)
Q Consensus       171 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~  201 (294)
                                 ..|+.+|.+.+.+.+.++.+
T Consensus       146 -----------~~Y~askaal~~~~~~la~e  165 (167)
T PF00106_consen  146 -----------SAYSASKAALRGLTQSLAAE  165 (167)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             -----------hhHHHHHHHHHHHHHHHHHh
Confidence                       78999999999999998876

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.69  E-value=2.4e-15  Score=129.64  Aligned_cols=213  Identities=18%  Similarity=0.159  Sum_probs=136.6

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHH-HHHhc----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSL-VNALK----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~-~~~~~----   97 (294)
                      +.+.++|+|+||||.+|+.+++.|+++|+.|+++.|+..+...+..   .......+..+..|.....+. .....    
T Consensus        76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~---~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~  152 (411)
T KOG1203|consen   76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG---VFFVDLGLQNVEADVVTAIDILKKLVEAVPK  152 (411)
T ss_pred             CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc---ccccccccceeeeccccccchhhhhhhhccc
Confidence            3456899999999999999999999999999999999877665543   222233455555555444333 23332    


Q ss_pred             cCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhh
Q 043792           98 GCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLC  177 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~  177 (294)
                      ...+++-|++...... +-..-..+...|++|+++||+.. +++|||++|+++..-+....      +....     .  
T Consensus       153 ~~~~v~~~~ggrp~~e-d~~~p~~VD~~g~knlvdA~~~a-Gvk~~vlv~si~~~~~~~~~------~~~~~-----~--  217 (411)
T KOG1203|consen  153 GVVIVIKGAGGRPEEE-DIVTPEKVDYEGTKNLVDACKKA-GVKRVVLVGSIGGTKFNQPP------NILLL-----N--  217 (411)
T ss_pred             cceeEEecccCCCCcc-cCCCcceecHHHHHHHHHHHHHh-CCceEEEEEeecCcccCCCc------hhhhh-----h--
Confidence            2357777766544332 11123457899999999999999 99999999987522211111      00000     1  


Q ss_pred             hhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCccccccc-cccCCCccccccHHHHHHHHHhhhcC
Q 043792          178 KKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAA-EMYEDGVMASVDLRFYVDAHICVFED  256 (294)
Q Consensus       178 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~~~~~~~-~~~~~~~~~~v~v~D~a~~i~~~~~~  256 (294)
                          ..+-.+|+.+|++++    +.|+++++|||+...-.............. ..-.++.-..+.-.|+|+.++.++.+
T Consensus       218 ----~~~~~~k~~~e~~~~----~Sgl~ytiIR~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~vael~~~all~  289 (411)
T KOG1203|consen  218 ----GLVLKAKLKAEKFLQ----DSGLPYTIIRPGGLEQDTGGQREVVVDDEKELLTVDGGAYSISRLDVAELVAKALLN  289 (411)
T ss_pred             ----hhhhHHHHhHHHHHH----hcCCCcEEEeccccccCCCCcceecccCccccccccccceeeehhhHHHHHHHHHhh
Confidence                335577888887666    479999999999886433211111111222 11122222367788999999998887


Q ss_pred             cCCCC
Q 043792          257 VSSYG  261 (294)
Q Consensus       257 ~~~~~  261 (294)
                      +....
T Consensus       290 ~~~~~  294 (411)
T KOG1203|consen  290 EAATF  294 (411)
T ss_pred             hhhcc
Confidence            76655

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.68  E-value=8.7e-15  Score=124.52  Aligned_cols=219  Identities=11%  Similarity=0.038  Sum_probs=140.0

Q ss_pred             CCCCCeEEEeCC--CchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhc-------cC----CCCeEEEECCC--C
Q 043792           23 SNATKTVCVMDA--SGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINY-------NE----EKKLKVFQADP--F   87 (294)
Q Consensus        23 ~~~~~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~-------~~----~~~v~~~~~Dl--~   87 (294)
                      ..++|++|||||  +..||..+++.|.++|.+|++ .|+....+.+...+...       ..    ......+.+|+  .
T Consensus         6 ~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   84 (303)
T PLN02730          6 DLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFD   84 (303)
T ss_pred             CCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecC
Confidence            467899999999  799999999999999999988 67655554443321100       00    01135677888  3


Q ss_pred             Chh------------------HHHHHhc-------cCCEEEecCCCCC----CC--Cc--chhhhHhHhhHHHHHHHHHH
Q 043792           88 DYH------------------SLVNALK-------GCSGLFYSFEPPS----DH--ST--YDELTAEVETMAAHNVLEAC  134 (294)
Q Consensus        88 ~~~------------------~~~~~~~-------~~d~Vih~a~~~~----~~--~~--~~~~~~~~n~~~~~~ll~~~  134 (294)
                      +.+                  ++.++++       .+|++|||||...    ..  ..  ..++.+++|+.+...+.+++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~  164 (303)
T PLN02730         85 TPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHF  164 (303)
T ss_pred             ccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence            222                  5555543       4799999996421    11  11  12388999999999998887


Q ss_pred             Hhc--CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh----cCCeEEE
Q 043792          135 AQT--NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD----RGISMVS  208 (294)
Q Consensus       135 ~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~i  208 (294)
                      ...  .+ .++|++||..+.......    .                  ..|+.+|.+.+.+.+.++.+    +|+++.+
T Consensus       165 ~p~m~~~-G~II~isS~a~~~~~p~~----~------------------~~Y~asKaAl~~l~~~la~El~~~~gIrVn~  221 (303)
T PLN02730        165 GPIMNPG-GASISLTYIASERIIPGY----G------------------GGMSSAKAALESDTRVLAFEAGRKYKIRVNT  221 (303)
T ss_pred             HHHHhcC-CEEEEEechhhcCCCCCC----c------------------hhhHHHHHHHHHHHHHHHHHhCcCCCeEEEE
Confidence            654  23 589999997532211100    0                  36999999999999998875    3699999


Q ss_pred             EecCceeCCCCCCCCcccccccc-ccCC-CccccccHHHHHHHHHhhhcCc--CCCCeEEee
Q 043792          209 INGGLVMGPDVTISNPYLKGAAE-MYED-GVMASVDLRFYVDAHICVFEDV--SSYGRYLCF  266 (294)
Q Consensus       209 lrp~~i~G~~~~~~~~~~~~~~~-~~~~-~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~  266 (294)
                      |.||.+-.+...... ....... ...+ ....+...+|++.++++++...  ...|+.+..
T Consensus       222 V~PG~v~T~~~~~~~-~~~~~~~~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~v  282 (303)
T PLN02730        222 ISAGPLGSRAAKAIG-FIDDMIEYSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYV  282 (303)
T ss_pred             EeeCCccCchhhccc-ccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEE
Confidence            999999765421100 0000000 0011 1112678899999999998643  335554433

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.68  E-value=5.1e-15  Score=125.64  Aligned_cols=223  Identities=17%  Similarity=0.061  Sum_probs=150.2

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ...++.++|||||+.||..+++.|+.+|.+|+...|+.++.+...+.+........+.++++|+++..+++++.+     
T Consensus        32 ~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~  111 (314)
T KOG1208|consen   32 DLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKK  111 (314)
T ss_pred             cCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhc
Confidence            345689999999999999999999999999999999987766665544333445678889999999988887764     


Q ss_pred             --cCCEEEecCCCCCCCCcc----hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHSTY----DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~~~----~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                        ..|++|+|||........    .+..+.+|..|...|.+.+...   ....|+|++||... ......    ...-.|
T Consensus       112 ~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~~----~~l~~~  186 (314)
T KOG1208|consen  112 EGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKIDL----KDLSGE  186 (314)
T ss_pred             CCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccch----hhccch
Confidence              369999999986654421    2477889999887777665433   12269999999752 111011    111111


Q ss_pred             CCC-CChhhhhhccchhHhhHHHHHHHHHHHHHhc--CCeEEEEecCceeCCCCCCCCccccccccccCCCccc-cccHH
Q 043792          169 RNW-SDVNLCKKFKLWHGLSKTLAEKTAWALAMDR--GISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMA-SVDLR  244 (294)
Q Consensus       169 ~~~-~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~-~v~v~  244 (294)
                      ... ....      ..|+.||.+...+..+++++.  |+.+..+.||.+.++.......+..   .....-.+. +-...
T Consensus       187 ~~~~~~~~------~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r~~~~~~---~l~~~l~~~~~ks~~  257 (314)
T KOG1208|consen  187 KAKLYSSD------AAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSRVNLLLR---LLAKKLSWPLTKSPE  257 (314)
T ss_pred             hccCccch------hHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceecchHHHH---HHHHHHHHHhccCHH
Confidence            111 1111      359999999999999988776  6999999999998775222000000   000011111 22567


Q ss_pred             HHHHHHHhhhcCcCC
Q 043792          245 FYVDAHICVFEDVSS  259 (294)
Q Consensus       245 D~a~~i~~~~~~~~~  259 (294)
                      .-|...+.++.+++.
T Consensus       258 ~ga~t~~~~a~~p~~  272 (314)
T KOG1208|consen  258 QGAATTCYAALSPEL  272 (314)
T ss_pred             HHhhheehhccCccc
Confidence            788888877776633

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.67  E-value=1.1e-15  Score=118.25  Aligned_cols=163  Identities=18%  Similarity=0.147  Sum_probs=127.6

Q ss_pred             CCCeEEEeCC-CchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           25 ATKTVCVMDA-SGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        25 ~~~~vlItGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      ..++|||||+ .|.||.+|+++|.++|+.|++..|+.+....|...       .++.....|+++++++.+...      
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~-------~gl~~~kLDV~~~~~V~~v~~evr~~~   78 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ-------FGLKPYKLDVSKPEEVVTVSGEVRANP   78 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh-------hCCeeEEeccCChHHHHHHHHHHhhCC
Confidence            3478999886 59999999999999999999999999998888752       378999999999998876653      


Q ss_pred             --cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                        ..|.++|+||..-...      ..-++.+++|+.|..+..++....  +.-..+|+++|...++.....         
T Consensus        79 ~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf~---------  149 (289)
T KOG1209|consen   79 DGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFG---------  149 (289)
T ss_pred             CCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccchh---------
Confidence              3599999988633211      112488999999988877776533  222479999999877766555         


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCC
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGP  217 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~  217 (294)
                                    +.|.+||.+...+.+.+.-+   .|++++.+-+|.|-..
T Consensus       150 --------------~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~  188 (289)
T KOG1209|consen  150 --------------SIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATD  188 (289)
T ss_pred             --------------hhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceecc
Confidence                          78999999998888777644   4899999888888544

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.67  E-value=7.3e-15  Score=120.92  Aligned_cols=165  Identities=20%  Similarity=0.155  Sum_probs=127.8

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      +...+-|+|||+-...|+.++++|.++|+.|.+-.-.++..+.+..+    ...+++..++.|++++++++++.+     
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~----~~s~rl~t~~LDVT~~esi~~a~~~V~~~  101 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGE----TKSPRLRTLQLDVTKPESVKEAAQWVKKH  101 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhh----hcCCcceeEeeccCCHHHHHHHHHHHHHh
Confidence            34467899999999999999999999999999998766666666652    126789999999999999988864     


Q ss_pred             ----cCCEEEecCCCCCCCCcc-------hhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCCCCCC
Q 043792           98 ----GCSGLFYSFEPPSDHSTY-------DELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDNPTSH  164 (294)
Q Consensus        98 ----~~d~Vih~a~~~~~~~~~-------~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~  164 (294)
                          +.-.||||||........       ....+++|+.|+..+..+...-  +.-.|+|++||.+.-...+..      
T Consensus       102 l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~p~~------  175 (322)
T KOG1610|consen  102 LGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVALPAL------  175 (322)
T ss_pred             cccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccCccc------
Confidence                357999999865433222       2388999999988887765432  123599999998643322222      


Q ss_pred             CCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCce
Q 043792          165 DFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLV  214 (294)
Q Consensus       165 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i  214 (294)
                                       .+|+.||.+.|.+...+..+   +|+.+.++-||.+
T Consensus       176 -----------------g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f  211 (322)
T KOG1610|consen  176 -----------------GPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFF  211 (322)
T ss_pred             -----------------ccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCcc
Confidence                             78999999999999888766   5999999999943

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.66  E-value=4.6e-15  Score=114.32  Aligned_cols=165  Identities=16%  Similarity=0.090  Sum_probs=124.6

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      ..+-+||||||+..||..++++|.+.|.+|++..|+....+....      ..+.+....+|+.|.++.++++.      
T Consensus         3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~------~~p~~~t~v~Dv~d~~~~~~lvewLkk~~   76 (245)
T COG3967           3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKA------ENPEIHTEVCDVADRDSRRELVEWLKKEY   76 (245)
T ss_pred             ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHh------cCcchheeeecccchhhHHHHHHHHHhhC
Confidence            346789999999999999999999999999999999877655444      34577888999999876665553      


Q ss_pred             -cCCEEEecCCCCCCCCcc--------hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHSTY--------DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~~--------~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                       ..+++|||||........        .++.+.+|+.++.+|..+...+   +.-..+|.+||.-+++.....       
T Consensus        77 P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~-------  149 (245)
T COG3967          77 PNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMAST-------  149 (245)
T ss_pred             CchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCccccc-------
Confidence             469999999985532111        1366889999998888877655   233479999997544433222       


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCC
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGP  217 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~  217 (294)
                                      ..|+.+|.+..-+-..+.++   .+++++=+-|+.|-.+
T Consensus       150 ----------------PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         150 ----------------PVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             ----------------ccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence                            56999999987666555444   4799999999999765

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.66  E-value=1.1e-14  Score=119.58  Aligned_cols=209  Identities=17%  Similarity=0.104  Sum_probs=152.5

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc-------
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG-------   98 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-------   98 (294)
                      ..+|+||||+..||..++.++..+|++|+++.|+.++...+..++........+.+..+|+.|.+++...+++       
T Consensus        33 ~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~  112 (331)
T KOG1210|consen   33 RRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGP  112 (331)
T ss_pred             cceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCC
Confidence            4799999999999999999999999999999999888776655433333334477889999999988877753       


Q ss_pred             CCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc-C---CCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           99 CSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT-N---TVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~-~---~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                      +|.+|+|||..-.....      -+..+++|..++.|.+.++... +   +..+++.+||..+ .++-.+    .     
T Consensus       113 ~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a-~~~i~G----y-----  182 (331)
T KOG1210|consen  113 IDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLA-MLGIYG----Y-----  182 (331)
T ss_pred             cceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhh-hcCccc----c-----
Confidence            59999999875433221      1388999999999999887655 2   2338999998764 333322    2     


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHH
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRF  245 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  245 (294)
                                   +.|..+|.+...+......+   +++.++..-|+.+-.|+....+ ..+-.....-.+....+.-++
T Consensus       183 -------------saYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En-~tkP~~t~ii~g~ss~~~~e~  248 (331)
T KOG1210|consen  183 -------------SAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFEREN-KTKPEETKIIEGGSSVIKCEE  248 (331)
T ss_pred             -------------cccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCcccccc-ccCchheeeecCCCCCcCHHH
Confidence                         77999999888877777665   4899999999999888743333 111111222233333578899


Q ss_pred             HHHHHHhhhcCcC
Q 043792          246 YVDAHICVFEDVS  258 (294)
Q Consensus       246 ~a~~i~~~~~~~~  258 (294)
                      +|++++.-+.+..
T Consensus       249 ~a~~~~~~~~rg~  261 (331)
T KOG1210|consen  249 MAKAIVKGMKRGN  261 (331)
T ss_pred             HHHHHHhHHhhcC
Confidence            9999998887643

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.64  E-value=1.2e-15  Score=126.47  Aligned_cols=210  Identities=18%  Similarity=0.088  Sum_probs=142.5

Q ss_pred             CCC--chHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--------cCCEE
Q 043792           33 DAS--GHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--------GCSGL  102 (294)
Q Consensus        33 Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--------~~d~V  102 (294)
                      |++  +.||+.+++.|+++|++|++++|+.++.+...+++.. ..  +.+++.+|++++++++++++        ++|++
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~-~~--~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~l   77 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAK-EY--GAEVIQCDLSDEESVEALFDEAVERFGGRIDIL   77 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHH-HT--TSEEEESCTTSHHHHHHHHHHHHHHHCSSESEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHH-Hc--CCceEeecCcchHHHHHHHHHHHhhcCCCeEEE
Confidence            666  9999999999999999999999998763222222111 11  24479999999988877753        47999


Q ss_pred             EecCCCCCC----CCc------chhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCC
Q 043792          103 FYSFEPPSD----HST------YDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNW  171 (294)
Q Consensus       103 ih~a~~~~~----~~~------~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~  171 (294)
                      ||+++....    ...      .....+++|+.+...+++++.+. ..-.++|++||..+.......             
T Consensus        78 V~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~-------------  144 (241)
T PF13561_consen   78 VNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGY-------------  144 (241)
T ss_dssp             EEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTT-------------
T ss_pred             EecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccc-------------
Confidence            999876543    111      11278899999999998887544 122589999987532221111             


Q ss_pred             CChhhhhhccchhHhhHHHHHHHHHHHHHh----cCCeEEEEecCceeCCCCCCCCc---cccccccccCCCccccccHH
Q 043792          172 SDVNLCKKFKLWHGLSKTLAEKTAWALAMD----RGISMVSINGGLVMGPDVTISNP---YLKGAAEMYEDGVMASVDLR  244 (294)
Q Consensus       172 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~ilrp~~i~G~~~~~~~~---~~~~~~~~~~~~~~~~v~v~  244 (294)
                                ..|+.+|.+.+.+.+.++.+    +|+++.+|.||.+..+.......   +.+......+-++  +...+
T Consensus       145 ----------~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r--~~~~~  212 (241)
T PF13561_consen  145 ----------SAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGR--LGTPE  212 (241)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSS--HBEHH
T ss_pred             ----------hhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccCC--CcCHH
Confidence                      67999999999998887754    58999999999996543110000   0000001112222  67899


Q ss_pred             HHHHHHHhhhcCc--CCCCeEEeecccc
Q 043792          245 FYVDAHICVFEDV--SSYGRYLCFNHVI  270 (294)
Q Consensus       245 D~a~~i~~~~~~~--~~~~~~~~~~~~~  270 (294)
                      |+|.+++.++...  ..+|+.+..++.+
T Consensus       213 evA~~v~fL~s~~a~~itG~~i~vDGG~  240 (241)
T PF13561_consen  213 EVANAVLFLASDAASYITGQVIPVDGGF  240 (241)
T ss_dssp             HHHHHHHHHHSGGGTTGTSEEEEESTTG
T ss_pred             HHHHHHHHHhCccccCccCCeEEECCCc
Confidence            9999999999765  4577776665543

...

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.64  E-value=2.2e-15  Score=112.93  Aligned_cols=205  Identities=20%  Similarity=0.142  Sum_probs=148.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc---CC
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG---CS  100 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~---~d  100 (294)
                      ..++.|++||+.-.||+.+|..|.+.|.+|+++.|++....++-.   .  ....+..+.+|+.+.+.+.+.+..   +|
T Consensus         5 laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~---e--~p~~I~Pi~~Dls~wea~~~~l~~v~pid   79 (245)
T KOG1207|consen    5 LAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVK---E--TPSLIIPIVGDLSAWEALFKLLVPVFPID   79 (245)
T ss_pred             ccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHh---h--CCcceeeeEecccHHHHHHHhhcccCchh
Confidence            357899999999999999999999999999999999877766654   2  223488999999998888888764   59


Q ss_pred             EEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc----CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCC
Q 043792          101 GLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT----NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERN  170 (294)
Q Consensus       101 ~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~  170 (294)
                      .++++|+.......-      .+..|++|+.+..++.+...+.    +--..+|++||.++.-.-...            
T Consensus        80 gLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nH------------  147 (245)
T KOG1207|consen   80 GLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNH------------  147 (245)
T ss_pred             hhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCc------------
Confidence            999999875543221      2377899999888888874433    122359999997632211111            


Q ss_pred             CCChhhhhhccchhHhhHHHHHHHHHHHHHhcC---CeEEEEecCceeCCCCCCC--CccccccccccCCC-ccccccHH
Q 043792          171 WSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRG---ISMVSINGGLVMGPDVTIS--NPYLKGAAEMYEDG-VMASVDLR  244 (294)
Q Consensus       171 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~---~~~~ilrp~~i~G~~~~~~--~~~~~~~~~~~~~~-~~~~v~v~  244 (294)
                                 +.|+.+|.+.+..-+.++.+.|   +++..+.|..++.......  .+-.++  ++...- ...|..++
T Consensus       148 -----------tvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k--~mL~riPl~rFaEV~  214 (245)
T KOG1207|consen  148 -----------TVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKK--KMLDRIPLKRFAEVD  214 (245)
T ss_pred             -----------eEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhcc--chhhhCchhhhhHHH
Confidence                       8899999999999999888864   8999999999975542111  101111  222111 11288999


Q ss_pred             HHHHHHHhhhcCcC
Q 043792          245 FYVDAHICVFEDVS  258 (294)
Q Consensus       245 D~a~~i~~~~~~~~  258 (294)
                      ++..+++.++....
T Consensus       215 eVVnA~lfLLSd~s  228 (245)
T KOG1207|consen  215 EVVNAVLFLLSDNS  228 (245)
T ss_pred             HHHhhheeeeecCc
Confidence            99999999987654

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.64  E-value=8.6e-15  Score=121.41  Aligned_cols=206  Identities=18%  Similarity=0.090  Sum_probs=132.3

Q ss_pred             HHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----cCCEEEecCCCCCCCCcchh
Q 043792           42 LVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----GCSGLFYSFEPPSDHSTYDE  117 (294)
Q Consensus        42 l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----~~d~Vih~a~~~~~~~~~~~  117 (294)
                      +++.|+++|++|++++|+.++.+             ...++.+|++|.+++.++++    ++|+||||||....  ...+
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-------------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~--~~~~   65 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-------------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGT--APVE   65 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-------------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCC--CCHH
Confidence            47899999999999999865421             12467899999999988886    48999999987532  2345


Q ss_pred             hhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCCCCC----CCCChh------hhhhccchhHh
Q 043792          118 LTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDER----NWSDVN------LCKKFKLWHGL  186 (294)
Q Consensus       118 ~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~----~~~~~~------~~~~~~~~Y~~  186 (294)
                      ..+++|+.++..+++++.+. ..-.++|++||.+++..+...      +..|.    ......      .+......|+.
T Consensus        66 ~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  139 (241)
T PRK12428         66 LVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRL------ELHKALAATASFDEGAAWLAAHPVALATGYQL  139 (241)
T ss_pred             HhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccch------HHHHhhhccchHHHHHHhhhccCCCcccHHHH
Confidence            88999999999999998764 122699999998754321110      11110    000000      00111278999


Q ss_pred             hHHHHHHHHHHHH-H---hcCCeEEEEecCceeCCCCCCCCcccccc-ccccCCCccccccHHHHHHHHHhhhcCc--CC
Q 043792          187 SKTLAEKTAWALA-M---DRGISMVSINGGLVMGPDVTISNPYLKGA-AEMYEDGVMASVDLRFYVDAHICVFEDV--SS  259 (294)
Q Consensus       187 sK~~~e~~~~~~~-~---~~~~~~~ilrp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~v~v~D~a~~i~~~~~~~--~~  259 (294)
                      +|.+.+.+.+.++ .   .+|+++++++||.+.++............ ..........+...+|+|++++.++...  ..
T Consensus       140 sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~l~s~~~~~~  219 (241)
T PRK12428        140 SKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVLVFLCSDAARWI  219 (241)
T ss_pred             HHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHHHHHcChhhcCc
Confidence            9999999998887 3   35899999999999887532111000000 0000001112677899999999988543  23


Q ss_pred             CCeEEeecc
Q 043792          260 YGRYLCFNH  268 (294)
Q Consensus       260 ~~~~~~~~~  268 (294)
                      .|+.+..++
T Consensus       220 ~G~~i~vdg  228 (241)
T PRK12428        220 NGVNLPVDG  228 (241)
T ss_pred             cCcEEEecC
Confidence            455444433

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.63  E-value=1.5e-14  Score=110.50  Aligned_cols=202  Identities=18%  Similarity=0.115  Sum_probs=136.6

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------c
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------G   98 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~   98 (294)
                      .+..+||||+..||++++..|.++|++|.+.+++....+.....  + ....+-.-+.+|+.+..+++..++       .
T Consensus        14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~--L-~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~   90 (256)
T KOG1200|consen   14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGD--L-GGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGT   90 (256)
T ss_pred             cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhh--c-CCCCccceeeeccCcHHHHHHHHHHHHHhcCC
Confidence            47899999999999999999999999999999987766555442  2 222355678999999877766554       3


Q ss_pred             CCEEEecCCCCCCC------CcchhhhHhHhhHHHHHHHHHHHhc---C--CCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           99 CSGLFYSFEPPSDH------STYDELTAEVETMAAHNVLEACAQT---N--TVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        99 ~d~Vih~a~~~~~~------~~~~~~~~~~n~~~~~~ll~~~~~~---~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                      ++++++|||.....      .+..+..+.+|+.|.+...+++.+.   .  +--++|++||+-... |+.+    +    
T Consensus        91 psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGki-GN~G----Q----  161 (256)
T KOG1200|consen   91 PSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKI-GNFG----Q----  161 (256)
T ss_pred             CcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccc-cccc----c----
Confidence            69999999986643      1222378899999998888876554   1  223899999973222 3222    2    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHH----HHHHHHHhcCCeEEEEecCceeCCCCCCCCc-cccccccccCCCcccccc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEK----TAWALAMDRGISMVSINGGLVMGPDVTISNP-YLKGAAEMYEDGVMASVD  242 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~----~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~v~  242 (294)
                                    +.|+++|.-.--    ..++.+. .++++.++.||.|-.|....-.. .++.-..+.+-++  +-.
T Consensus       162 --------------tnYAAsK~GvIgftktaArEla~-knIrvN~VlPGFI~tpMT~~mp~~v~~ki~~~iPmgr--~G~  224 (256)
T KOG1200|consen  162 --------------TNYAASKGGVIGFTKTAARELAR-KNIRVNVVLPGFIATPMTEAMPPKVLDKILGMIPMGR--LGE  224 (256)
T ss_pred             --------------hhhhhhcCceeeeeHHHHHHHhh-cCceEeEeccccccChhhhhcCHHHHHHHHccCCccc--cCC
Confidence                          567777654322    2223332 38999999999997776332221 1111112233333  556


Q ss_pred             HHHHHHHHHhhhcC
Q 043792          243 LRFYVDAHICVFED  256 (294)
Q Consensus       243 v~D~a~~i~~~~~~  256 (294)
                      .+|+|..++.+...
T Consensus       225 ~EevA~~V~fLAS~  238 (256)
T KOG1200|consen  225 AEEVANLVLFLASD  238 (256)
T ss_pred             HHHHHHHHHHHhcc
Confidence            89999999888743

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.62  E-value=6.9e-14  Score=116.64  Aligned_cols=167  Identities=18%  Similarity=0.125  Sum_probs=120.9

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC--hhhHHHHHhhccCC-CCeEEEECCCCC-hhHHHHHhc--
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK--LQCIEEELINYNEE-KKLKVFQADPFD-YHSLVNALK--   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~l~~~~~~~~~~-~~v~~~~~Dl~~-~~~~~~~~~--   97 (294)
                      .++++|+||||++.||..+++.|+++|++|+++.|+...  .+.+.....  ... ..+.+..+|+++ .++++.+++  
T Consensus         3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dvs~~~~~v~~~~~~~   80 (251)
T COG1028           3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK--EAGGGRAAAVAADVSDDEESVEALVAAA   80 (251)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH--hcCCCcEEEEEecCCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999988887654  333333111  011 257788899998 877766654  


Q ss_pred             -----cCCEEEecCCCCCC----CCc---chhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 -----GCSGLFYSFEPPSD----HST---YDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 -----~~d~Vih~a~~~~~----~~~---~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                           ++|++||||+....    ...   ..+..+++|+.+...+.+++...-.-+++|++||..+. ....     .  
T Consensus        81 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~-----~--  152 (251)
T COG1028          81 EEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPP-----G--  152 (251)
T ss_pred             HHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCC-----C--
Confidence                 37999999997532    111   12388999999999988854443011189999998633 2211     0  


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCcee
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVM  215 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~  215 (294)
                               .      ..|+.||.+.+.+.+.++.+   +|++++.+.||.+-
T Consensus       153 ---------~------~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~  190 (251)
T COG1028         153 ---------Q------AAYAASKAALIGLTKALALELAPRGIRVNAVAPGYID  190 (251)
T ss_pred             ---------c------chHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCC
Confidence                     0      67999999999999888855   58999999999554

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.62  E-value=3.7e-15  Score=116.73  Aligned_cols=219  Identities=15%  Similarity=0.027  Sum_probs=143.8

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc-----
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG-----   98 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-----   98 (294)
                      ..+|++++||+.|.||+.++++|+++|..+.+++.+.+..+...+ |........+.|+++|+++..++++++++     
T Consensus         3 ~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~ak-L~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~f   81 (261)
T KOG4169|consen    3 LTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAK-LQAINPSVSVIFIKCDVTNRGDLEAAFDKILATF   81 (261)
T ss_pred             ccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHH-HhccCCCceEEEEEeccccHHHHHHHHHHHHHHh
Confidence            458999999999999999999999999999998888777655544 11223345678999999999999888863     


Q ss_pred             --CCEEEecCCCCCCCCcchhhhHhHhhHHHHH----HHHHHHhcC--CCcEEEEecCcceeeeCCCCCCCCCCCCCCCC
Q 043792           99 --CSGLFYSFEPPSDHSTYDELTAEVETMAAHN----VLEACAQTN--TVDKVVFTSSLTAVVWNNHRDNPTSHDFDERN  170 (294)
Q Consensus        99 --~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~----ll~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~  170 (294)
                        +|++||.||....  .+-++.+.+|+.|..+    .+..+.+.+  .-.-+|++||..  +..+..    ..      
T Consensus        82 g~iDIlINgAGi~~d--kd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~--GL~P~p----~~------  147 (261)
T KOG4169|consen   82 GTIDILINGAGILDD--KDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVA--GLDPMP----VF------  147 (261)
T ss_pred             CceEEEEcccccccc--hhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEecccc--ccCccc----cc------
Confidence              6999999998763  2234788899776554    455555442  234689999964  221111    10      


Q ss_pred             CCChhhhhhccchhHhhHHHHHHHHHH-----HHHhcCCeEEEEecCceeCCCCCCC---CccccccccccCCC-ccccc
Q 043792          171 WSDVNLCKKFKLWHGLSKTLAEKTAWA-----LAMDRGISMVSINGGLVMGPDVTIS---NPYLKGAAEMYEDG-VMASV  241 (294)
Q Consensus       171 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~-----~~~~~~~~~~ilrp~~i~G~~~~~~---~~~~~~~~~~~~~~-~~~~v  241 (294)
                                 ..|++||...-.+-+.     +..+.|+++..++||.+-..-...-   +.++.-...+...- ..+-.
T Consensus       148 -----------pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~~q  216 (261)
T KOG4169|consen  148 -----------PVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAPKQ  216 (261)
T ss_pred             -----------hhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcccC
Confidence                       6799999876444333     3455699999999997732110000   00111111000000 00134


Q ss_pred             cHHHHHHHHHhhhcCcCCCCeEEeecc
Q 043792          242 DLRFYVDAHICVFEDVSSYGRYLCFNH  268 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~~~~~~~~~~~~  268 (294)
                      ...+++..++.+++.+..+..|++..+
T Consensus       217 ~~~~~a~~~v~aiE~~~NGaiw~v~~g  243 (261)
T KOG4169|consen  217 SPACCAINIVNAIEYPKNGAIWKVDSG  243 (261)
T ss_pred             CHHHHHHHHHHHHhhccCCcEEEEecC
Confidence            568899999999998655446877654

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.60  E-value=1.3e-13  Score=108.14  Aligned_cols=200  Identities=17%  Similarity=0.110  Sum_probs=134.0

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHC-CCeEEEEe-cCCCChh-hHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           26 TKTVCVMDASGHFASALVRRLLLR-GYTVHAAL-HNHGKLQ-CIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~-r~~~~~~-~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      .+.|+||||+..||..||++|++. |.++++.. |+++.+. .+..   .....+++.+++.|+++.+++.++++     
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~---k~~~d~rvHii~Ldvt~deS~~~~~~~V~~i   79 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELAL---KSKSDSRVHIIQLDVTCDESIDNFVQEVEKI   79 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHH---hhccCCceEEEEEecccHHHHHHHHHHHHhh
Confidence            356999999999999999999985 66666654 4566642 2222   22356799999999999988887764     


Q ss_pred             ----cCCEEEecCCCCCCCC----cch---hhhHhHhhHHHHHHHHHHH----hcC----------CCcEEEEecCccee
Q 043792           98 ----GCSGLFYSFEPPSDHS----TYD---ELTAEVETMAAHNVLEACA----QTN----------TVDKVVFTSSLTAV  152 (294)
Q Consensus        98 ----~~d~Vih~a~~~~~~~----~~~---~~~~~~n~~~~~~ll~~~~----~~~----------~~~~~v~~Ss~~~~  152 (294)
                          ++|.+|+|||......    ..+   .+.+++|..+...+.+++.    +..          +...+|++||.+.-
T Consensus        80 Vg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s  159 (249)
T KOG1611|consen   80 VGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGS  159 (249)
T ss_pred             cccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccc
Confidence                4699999998754321    111   2779999988877777643    220          11268999997532


Q ss_pred             eeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCcccccc
Q 043792          153 VWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGA  229 (294)
Q Consensus       153 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~  229 (294)
                      ..+...              .+.      ..|..||.+...+.+..+-+   .++-++.+.||+|-....       .  
T Consensus       160 ~~~~~~--------------~~~------~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMg-------g--  210 (249)
T KOG1611|consen  160 IGGFRP--------------GGL------SAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMG-------G--  210 (249)
T ss_pred             cCCCCC--------------cch------hhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCC-------C--
Confidence            111111              111      78999999999888887755   368899999999943321       1  


Q ss_pred             ccccCCCccccccHHHHHHHHHhhhcC--cCCCCeEE
Q 043792          230 AEMYEDGVMASVDLRFYVDAHICVFED--VSSYGRYL  264 (294)
Q Consensus       230 ~~~~~~~~~~~v~v~D~a~~i~~~~~~--~~~~~~~~  264 (294)
                             ....+.+++-+.-++..+.+  +..+|.|+
T Consensus       211 -------~~a~ltveeSts~l~~~i~kL~~~hnG~ff  240 (249)
T KOG1611|consen  211 -------KKAALTVEESTSKLLASINKLKNEHNGGFF  240 (249)
T ss_pred             -------CCcccchhhhHHHHHHHHHhcCcccCcceE
Confidence                   11155667777776666643  34455543

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.60  E-value=1.3e-14  Score=113.57  Aligned_cols=208  Identities=15%  Similarity=0.041  Sum_probs=153.3

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEecC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSF  106 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~a  106 (294)
                      .+.++.|+.||.|+++|+.....++.|.++.|+..+.  +.+     .....++++.+|.....-++..+.+...++-++
T Consensus        53 e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~--~l~-----sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~  125 (283)
T KOG4288|consen   53 EWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQ--TLS-----SWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMM  125 (283)
T ss_pred             HHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcc--hhh-----CCCcccchhhccccccCcchhhhcCCcccHHHh
Confidence            5789999999999999999999999999999986532  211     233468888888877666777778889999998


Q ss_pred             CCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHh
Q 043792          107 EPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGL  186 (294)
Q Consensus       107 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~  186 (294)
                      +....    ...+...|-....+..+++.+. ++++|+|+|-.   .+|...+.|                    ..|..
T Consensus       126 ggfgn----~~~m~~ing~ani~a~kaa~~~-gv~~fvyISa~---d~~~~~~i~--------------------rGY~~  177 (283)
T KOG4288|consen  126 GGFGN----IILMDRINGTANINAVKAAAKA-GVPRFVYISAH---DFGLPPLIP--------------------RGYIE  177 (283)
T ss_pred             cCccc----hHHHHHhccHhhHHHHHHHHHc-CCceEEEEEhh---hcCCCCccc--------------------hhhhc
Confidence            86553    3367778888888899999999 99999999974   333222111                    56999


Q ss_pred             hHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc------------ccccc------ccccCCCccccccHHHHHH
Q 043792          187 SKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP------------YLKGA------AEMYEDGVMASVDLRFYVD  248 (294)
Q Consensus       187 sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~------------~~~~~------~~~~~~~~~~~v~v~D~a~  248 (294)
                      +|+.+|..+..   .++++-+++|||.+||...-.+..            ..+..      .+..++...+.+.++++|.
T Consensus       178 gKR~AE~Ell~---~~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~  254 (283)
T KOG4288|consen  178 GKREAEAELLK---KFRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVAL  254 (283)
T ss_pred             cchHHHHHHHH---hcCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHH
Confidence            99999998876   457999999999999984322211            11111      1344555556899999999


Q ss_pred             HHHhhhcCcCCCCeEEeecccccHHHHHHHH
Q 043792          249 AHICVFEDVSSYGRYLCFNHVINCNEDAMKL  279 (294)
Q Consensus       249 ~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~~  279 (294)
                      +.+.++++++..       +.+++.++.+.-
T Consensus       255 aal~ai~dp~f~-------Gvv~i~eI~~~a  278 (283)
T KOG4288|consen  255 AALKAIEDPDFK-------GVVTIEEIKKAA  278 (283)
T ss_pred             HHHHhccCCCcC-------ceeeHHHHHHHH
Confidence            999999887653       344555555443

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.59  E-value=7.1e-14  Score=110.59  Aligned_cols=159  Identities=19%  Similarity=0.179  Sum_probs=113.4

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCC--C-Ch-hhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc----
Q 043792           28 TVCVMDASGHFASALVRRLLLRG-YTVHAALHNH--G-KL-QCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG----   98 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~--~-~~-~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~----   98 (294)
                      ++|||||+|.||..+++.|++++ .+|+++.|+.  . .. +.+.+   ......++.++.+|++|++++.++++.    
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~---l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~   78 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRE---LESAGARVEYVQCDVTDPEAVAAALAQLRQR   78 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHH---HHHTT-EEEEEE--TTSHHHHHHHHHTSHTT
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHH---HHhCCCceeeeccCccCHHHHHHHHHHHHhc
Confidence            58999999999999999999997 5788888882  1 22 23333   333456899999999999999999853    


Q ss_pred             ---CCEEEecCCCCCCCCc---ch---hhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCC
Q 043792           99 ---CSGLFYSFEPPSDHST---YD---ELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDER  169 (294)
Q Consensus        99 ---~d~Vih~a~~~~~~~~---~~---~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~  169 (294)
                         ++.|||+++.......   +.   ...+..-+.++.+|.++.... .++.||.+||.++. .|..+    .      
T Consensus        79 ~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~-~l~~~i~~SSis~~-~G~~g----q------  146 (181)
T PF08659_consen   79 FGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR-PLDFFILFSSISSL-LGGPG----Q------  146 (181)
T ss_dssp             SS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT-TTSEEEEEEEHHHH-TT-TT----B------
T ss_pred             cCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC-CCCeEEEECChhHh-ccCcc----h------
Confidence               5899999987543211   11   266778899999999999887 88999999998754 44443    3      


Q ss_pred             CCCChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCce
Q 043792          170 NWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLV  214 (294)
Q Consensus       170 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i  214 (294)
                                  ..|+.+-...+.+.+... ..|.++++|.-+.+
T Consensus       147 ------------~~YaaAN~~lda~a~~~~-~~g~~~~sI~wg~W  178 (181)
T PF08659_consen  147 ------------SAYAAANAFLDALARQRR-SRGLPAVSINWGAW  178 (181)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHH-HTTSEEEEEEE-EB
T ss_pred             ------------HhHHHHHHHHHHHHHHHH-hCCCCEEEEEcccc
Confidence                        789999999988887654 45899998887654

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.57  E-value=9e-13  Score=112.16  Aligned_cols=222  Identities=9%  Similarity=-0.010  Sum_probs=130.5

Q ss_pred             CCCCCeEEEeCCC--chHHHHHHHHHHHCCCeEEEEecCC---------CChhh--HH-----------HHHhhccCCCC
Q 043792           23 SNATKTVCVMDAS--GHFASALVRRLLLRGYTVHAALHNH---------GKLQC--IE-----------EELINYNEEKK   78 (294)
Q Consensus        23 ~~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~--l~-----------~~~~~~~~~~~   78 (294)
                      ...+|+++||||+  ..||+++++.|+++|++|++.++.+         +..+.  ..           ..+.....-..
T Consensus         5 ~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~   84 (299)
T PRK06300          5 DLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDT   84 (299)
T ss_pred             CCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCC
Confidence            4567999999995  8999999999999999999976431         00000  00           00000000001


Q ss_pred             eEEEECCCCC--------hhHHHHHhc-------cCCEEEecCCCCCC--C----Cc--chhhhHhHhhHHHHHHHHHHH
Q 043792           79 LKVFQADPFD--------YHSLVNALK-------GCSGLFYSFEPPSD--H----ST--YDELTAEVETMAAHNVLEACA  135 (294)
Q Consensus        79 v~~~~~Dl~~--------~~~~~~~~~-------~~d~Vih~a~~~~~--~----~~--~~~~~~~~n~~~~~~ll~~~~  135 (294)
                      .+-+..|+.+        .+++.++++       ++|++|||||....  .    ..  ..++.+++|+.+..++.+++.
T Consensus        85 ~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~  164 (299)
T PRK06300         85 PEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFG  164 (299)
T ss_pred             CEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            1222222222        123444432       47999999975321  1    11  113788999999999999887


Q ss_pred             hc-CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh----cCCeEEEEe
Q 043792          136 QT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD----RGISMVSIN  210 (294)
Q Consensus       136 ~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~ilr  210 (294)
                      .. ..-.++|++||..+.... ..    .           .      ..|+.+|.+.+.+.+.++.+    +|+++.+|.
T Consensus       165 p~m~~~G~ii~iss~~~~~~~-p~----~-----------~------~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~  222 (299)
T PRK06300        165 PIMNPGGSTISLTYLASMRAV-PG----Y-----------G------GGMSSAKAALESDTKVLAWEAGRRWGIRVNTIS  222 (299)
T ss_pred             HHhhcCCeEEEEeehhhcCcC-CC----c-----------c------HHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEE
Confidence            65 122478999886532111 00    0           0      26999999999999988865    379999999


Q ss_pred             cCceeCCCCCCCC---ccccccccccCCCccccccHHHHHHHHHhhhcCc--CCCCeEEeecc
Q 043792          211 GGLVMGPDVTISN---PYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDV--SSYGRYLCFNH  268 (294)
Q Consensus       211 p~~i~G~~~~~~~---~~~~~~~~~~~~~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~~  268 (294)
                      ||.+-.+......   ...+......+.  ..+...+|++.++++++...  ...|+.+..++
T Consensus       223 PG~v~T~~~~~~~~~~~~~~~~~~~~p~--~r~~~peevA~~v~~L~s~~~~~itG~~i~vdG  283 (299)
T PRK06300        223 AGPLASRAGKAIGFIERMVDYYQDWAPL--PEPMEAEQVGAAAAFLVSPLASAITGETLYVDH  283 (299)
T ss_pred             eCCccChhhhcccccHHHHHHHHhcCCC--CCCcCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence            9998665421100   000000000111  12667899999999988653  33565444333

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.53  E-value=1.8e-13  Score=103.04  Aligned_cols=159  Identities=15%  Similarity=0.090  Sum_probs=119.8

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~  101 (294)
                      ++||..+|.||||..|+.+++.+++.+  -+|+++.|+.-.-         ......+.....|+...+++...+.+.|+
T Consensus        16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d---------~at~k~v~q~~vDf~Kl~~~a~~~qg~dV   86 (238)
T KOG4039|consen   16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPD---------PATDKVVAQVEVDFSKLSQLATNEQGPDV   86 (238)
T ss_pred             hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCC---------ccccceeeeEEechHHHHHHHhhhcCCce
Confidence            457899999999999999999999987  6899999875321         12234688888999888899999999999


Q ss_pred             EEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhcc
Q 043792          102 LFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFK  181 (294)
Q Consensus       102 Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  181 (294)
                      .|.+-+......- .+..+.+.-.-...+.++++.. ||++|+.+||.++-.   ..    .                  
T Consensus        87 ~FcaLgTTRgkaG-adgfykvDhDyvl~~A~~AKe~-Gck~fvLvSS~GAd~---sS----r------------------  139 (238)
T KOG4039|consen   87 LFCALGTTRGKAG-ADGFYKVDHDYVLQLAQAAKEK-GCKTFVLVSSAGADP---SS----R------------------  139 (238)
T ss_pred             EEEeecccccccc-cCceEeechHHHHHHHHHHHhC-CCeEEEEEeccCCCc---cc----c------------------
Confidence            9999776554433 2244555555566778888888 999999999976311   11    1                  


Q ss_pred             chhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCC
Q 043792          182 LWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTI  221 (294)
Q Consensus       182 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~  221 (294)
                      -.|...|...|+-+.++-   =-.++|+|||.+.|.....
T Consensus       140 FlY~k~KGEvE~~v~eL~---F~~~~i~RPG~ll~~R~es  176 (238)
T KOG4039|consen  140 FLYMKMKGEVERDVIELD---FKHIIILRPGPLLGERTES  176 (238)
T ss_pred             eeeeeccchhhhhhhhcc---ccEEEEecCcceecccccc
Confidence            469999999998877642   1357899999999887433

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.53  E-value=4e-13  Score=139.54  Aligned_cols=170  Identities=14%  Similarity=0.030  Sum_probs=128.2

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHC-CCeEEEEecCCCC-----------------------------------------
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLR-GYTVHAALHNHGK-----------------------------------------   62 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~-----------------------------------------   62 (294)
                      +++++|||||+|.||..+++.|+++ |.+|++++|+...                                         
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5689999999999999999999998 6999999998210                                         


Q ss_pred             ---hhhHHHHHh-hccCCCCeEEEECCCCChhHHHHHhc------cCCEEEecCCCCCCCC---cc---hhhhHhHhhHH
Q 043792           63 ---LQCIEEELI-NYNEEKKLKVFQADPFDYHSLVNALK------GCSGLFYSFEPPSDHS---TY---DELTAEVETMA  126 (294)
Q Consensus        63 ---~~~l~~~~~-~~~~~~~v~~~~~Dl~~~~~~~~~~~------~~d~Vih~a~~~~~~~---~~---~~~~~~~n~~~  126 (294)
                         ...+...+. +...+..+.++.+|++|.+++.++++      ++|.|||+||......   ..   .++.+++|+.|
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence               000000000 11234568899999999998887775      4799999999754321   11   13789999999


Q ss_pred             HHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc-CCe
Q 043792          127 AHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR-GIS  205 (294)
Q Consensus       127 ~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~  205 (294)
                      +.++++++... ..++||++||..+. +|..+    .                  ..|+.+|...+.+.+.++.+. +++
T Consensus      2156 ~~~Ll~al~~~-~~~~IV~~SSvag~-~G~~g----q------------------s~YaaAkaaL~~la~~la~~~~~ir 2211 (2582)
T TIGR02813      2156 LLSLLAALNAE-NIKLLALFSSAAGF-YGNTG----Q------------------SDYAMSNDILNKAALQLKALNPSAK 2211 (2582)
T ss_pred             HHHHHHHHHHh-CCCeEEEEechhhc-CCCCC----c------------------HHHHHHHHHHHHHHHHHHHHcCCcE
Confidence            99999999877 66789999998643 33322    2                  679999999998888887765 689


Q ss_pred             EEEEecCceeCCC
Q 043792          206 MVSINGGLVMGPD  218 (294)
Q Consensus       206 ~~ilrp~~i~G~~  218 (294)
                      ++++.||.+-|..
T Consensus      2212 V~sI~wG~wdtgm 2224 (2582)
T TIGR02813      2212 VMSFNWGPWDGGM 2224 (2582)
T ss_pred             EEEEECCeecCCc
Confidence            9999999886654

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.47  E-value=9.4e-13  Score=108.52  Aligned_cols=170  Identities=16%  Similarity=0.105  Sum_probs=127.2

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhH----HHHHhc--c
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHS----LVNALK--G   98 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~----~~~~~~--~   98 (294)
                      .+.-..|||||..||+..+++|+++|.+|+.++|+.++.+.+..|+- ....-.++++..|+++++.    +.+.+.  +
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~-~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~  126 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIE-EKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLD  126 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH-HHhCcEEEEEEEecCCCchhHHHHHHHhcCCc
Confidence            34789999999999999999999999999999999999988877642 2233568899999987764    444444  4


Q ss_pred             CCEEEecCCCCCCCCcc--------hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           99 CSGLFYSFEPPSDHSTY--------DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~~~--------~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                      +.++|||+|........        ....+.+|+.++..+.+.....   .+-.-+|++||.+....-+..         
T Consensus       127 VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~---------  197 (312)
T KOG1014|consen  127 VGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLL---------  197 (312)
T ss_pred             eEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhH---------
Confidence            67999999986633211        1266778888877777765433   144579999997633221111         


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCC
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPD  218 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~  218 (294)
                                    +.|+.+|...+.+...+.+++   |+.+-.+-|..|-++.
T Consensus       198 --------------s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm  237 (312)
T KOG1014|consen  198 --------------SVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKM  237 (312)
T ss_pred             --------------HHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccc
Confidence                          789999998888888877665   7999999999987666

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.45  E-value=1.2e-12  Score=102.41  Aligned_cols=238  Identities=14%  Similarity=0.061  Sum_probs=150.3

Q ss_pred             CCCeEEEeCCCchHHHHHHH-----HHHHCC----CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHH
Q 043792           25 ATKTVCVMDASGHFASALVR-----RLLLRG----YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNA   95 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~-----~L~~~g----~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~   95 (294)
                      +..+.++-+++|+|+.+|..     .+-..+    |+|++++|++.+.+.              ++-+.|..-..  -.+
T Consensus        11 ~sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~ri--------------tw~el~~~Gip--~sc   74 (315)
T KOG3019|consen   11 KSRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKARI--------------TWPELDFPGIP--ISC   74 (315)
T ss_pred             ccccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCccc--------------ccchhcCCCCc--eeh
Confidence            34567788999999988877     333333    899999999876432              33223322111  011


Q ss_pred             hccCCEEEecCCCCCCCCcc--hhhhHhHhhHHHHHHHHHHHhcCC-CcEEEEecCcceeeeCCCCCCCCCCCCCCCCCC
Q 043792           96 LKGCSGLFYSFEPPSDHSTY--DELTAEVETMAAHNVLEACAQTNT-VDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWS  172 (294)
Q Consensus        96 ~~~~d~Vih~a~~~~~~~~~--~~~~~~~n~~~~~~ll~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~  172 (294)
                      ...++.+.+++..+...++.  ........+..+..+.++...++. .+.+|.+|..+.+.  ...    ...|+|+.+.
T Consensus        75 ~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~--pS~----s~eY~e~~~~  148 (315)
T KOG3019|consen   75 VAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYV--PSE----SQEYSEKIVH  148 (315)
T ss_pred             HHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEec--ccc----cccccccccc
Confidence            12234445555544433332  124555667778899999888733 45789999886333  322    3478998877


Q ss_pred             ChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc----cccccccccCCC--ccccccHHHH
Q 043792          173 DVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP----YLKGAAEMYEDG--VMASVDLRFY  246 (294)
Q Consensus       173 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~----~~~~~~~~~~~~--~~~~v~v~D~  246 (294)
                      +..      .....--...|.....  .....+.+++|.|.|.|.+......    +.-|.....+.|  .++|||++|+
T Consensus       149 qgf------d~~srL~l~WE~aA~~--~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GGPlGsG~Q~fpWIHv~DL  220 (315)
T KOG3019|consen  149 QGF------DILSRLCLEWEGAALK--ANKDVRVALIRIGVVLGKGGGALAMMILPFQMGAGGPLGSGQQWFPWIHVDDL  220 (315)
T ss_pred             CCh------HHHHHHHHHHHHHhhc--cCcceeEEEEEEeEEEecCCcchhhhhhhhhhccCCcCCCCCeeeeeeehHHH
Confidence            665      3333222222332222  1235999999999999998432222    111222233444  4459999999


Q ss_pred             HHHHHhhhcCcCCCCeEE-eecccccHHHHHHHHHHHhCCCCCCCCC
Q 043792          247 VDAHICVFEDVSSYGRYL-CFNHVINCNEDAMKLARMLLPPSDTSTP  292 (294)
Q Consensus       247 a~~i~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~  292 (294)
                      +..|..+++++...|..+ +..++.+..|+.+.+...++.+.-++.|
T Consensus       221 ~~li~~ale~~~v~GViNgvAP~~~~n~Ef~q~lg~aL~Rp~~~pvP  267 (315)
T KOG3019|consen  221 VNLIYEALENPSVKGVINGVAPNPVRNGEFCQQLGSALSRPSWLPVP  267 (315)
T ss_pred             HHHHHHHHhcCCCCceecccCCCccchHHHHHHHHHHhCCCcccCCc
Confidence            999999999988777654 5677899999999999999888665544

>PTZ00325 malate dehydrogenase; Provisional

Probab=99.42  E-value=1.9e-12  Score=110.31  Aligned_cols=180  Identities=12%  Similarity=0.009  Sum_probs=124.2

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCS  100 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d  100 (294)
                      ..+|+||.|+|++|.+|+.++..|+.++  .++..+++.....+.+ +   +.....  .....+.+|+.++.+.++++|
T Consensus         5 ~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~-D---l~~~~~--~~~v~~~td~~~~~~~l~gaD   78 (321)
T PTZ00325          5 ALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAA-D---LSHIDT--PAKVTGYADGELWEKALRGAD   78 (321)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCccccc-c---hhhcCc--CceEEEecCCCchHHHhCCCC
Confidence            3467899999999999999999998665  6899998832221111 1   111111  233445556556677889999


Q ss_pred             EEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhc
Q 043792          101 GLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKF  180 (294)
Q Consensus       101 ~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~  180 (294)
                      +||+++|.+........+.+..|+..+.+++++++++ +++++|+++|-.+.......    ...+.+....++.     
T Consensus        79 vVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~-~~~~iviv~SNPvdv~~~~~----~~~~~~~sg~p~~-----  148 (321)
T PTZ00325         79 LVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASS-APKAIVGIVSNPVNSTVPIA----AETLKKAGVYDPR-----  148 (321)
T ss_pred             EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecCcHHHHHHHH----HhhhhhccCCChh-----
Confidence            9999999877655556688999999999999999999 99999999996422211000    0001122223333     


Q ss_pred             cchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCC
Q 043792          181 KLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVT  220 (294)
Q Consensus       181 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~  220 (294)
                       ..||.+-+..-++-...+++.++....++ +.|+|.+..
T Consensus       149 -~viG~g~LDs~R~r~~la~~l~v~~~~V~-~~VlGeHGd  186 (321)
T PTZ00325        149 -KLFGVTTLDVVRARKFVAEALGMNPYDVN-VPVVGGHSG  186 (321)
T ss_pred             -heeechhHHHHHHHHHHHHHhCcChhheE-EEEEeecCC
Confidence             66888756666666777777788888888 888888854

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.37  E-value=1.2e-12  Score=102.81  Aligned_cols=212  Identities=14%  Similarity=-0.002  Sum_probs=132.7

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..+.+.|||||++..||..++..+.+++.+.....+.....+ +.. ++. ...+..-...+|++...-+.++++     
T Consensus         3 ~~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~-~~~-L~v-~~gd~~v~~~g~~~e~~~l~al~e~~r~k   79 (253)
T KOG1204|consen    3 LNMRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE-LEG-LKV-AYGDDFVHVVGDITEEQLLGALREAPRKK   79 (253)
T ss_pred             cccceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc-ccc-eEE-EecCCcceechHHHHHHHHHHHHhhhhhc
Confidence            445688999999999999999999998866544433322211 100 000 001122223344444443444432     


Q ss_pred             --cCCEEEecCCCCCCCCcc---------hhhhHhHhhHHHHHHHHHHHhc-CC---CcEEEEecCcceeeeCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHSTY---------DELTAEVETMAAHNVLEACAQT-NT---VDKVVFTSSLTAVVWNNHRDNPT  162 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~~~---------~~~~~~~n~~~~~~ll~~~~~~-~~---~~~~v~~Ss~~~~~~~~~~~~~~  162 (294)
                        +.|.||||||.......-         -++.++.|+.+...|.+.+... ++   .+-+|++||.+++-+-..-    
T Consensus        80 ~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~w----  155 (253)
T KOG1204|consen   80 GGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSW----  155 (253)
T ss_pred             CCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHH----
Confidence              359999999876543211         1388999999998888876655 22   2679999998743322222    


Q ss_pred             CCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc--CCeEEEEecCceeCCCCCCCCcccccc---c---cccC
Q 043792          163 SHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR--GISMVSINGGLVMGPDVTISNPYLKGA---A---EMYE  234 (294)
Q Consensus       163 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ilrp~~i~G~~~~~~~~~~~~~---~---~~~~  234 (294)
                                         ..|+.+|.+-+.+.+.++.+.  ++.+..++||.+-.+..   ....++.   +   .++.
T Consensus       156 -------------------a~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq---~~ir~~~~~~p~~l~~f~  213 (253)
T KOG1204|consen  156 -------------------AAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQ---VCIRETSRMTPADLKMFK  213 (253)
T ss_pred             -------------------HHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhH---HHHhhccCCCHHHHHHHH
Confidence                               679999999999999988664  79999999999865542   1111111   0   1111


Q ss_pred             C--CccccccHHHHHHHHHhhhcCc-CCCCeE
Q 043792          235 D--GVMASVDLRFYVDAHICVFEDV-SSYGRY  263 (294)
Q Consensus       235 ~--~~~~~v~v~D~a~~i~~~~~~~-~~~~~~  263 (294)
                      .  .....+...+.|+.+..+++.. ..+|+|
T Consensus       214 el~~~~~ll~~~~~a~~l~~L~e~~~f~sG~~  245 (253)
T KOG1204|consen  214 ELKESGQLLDPQVTAKVLAKLLEKGDFVSGQH  245 (253)
T ss_pred             HHHhcCCcCChhhHHHHHHHHHHhcCcccccc
Confidence            1  0112778889999999888776 555654

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.31  E-value=5.7e-12  Score=94.62  Aligned_cols=213  Identities=17%  Similarity=0.101  Sum_probs=143.6

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      +.++...+||||...+|...++.|.++|..|..++-..++-.....+     .+.++-|...|++++.++..++.     
T Consensus         6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vake-----lg~~~vf~padvtsekdv~aala~ak~k   80 (260)
T KOG1199|consen    6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKE-----LGGKVVFTPADVTSEKDVRAALAKAKAK   80 (260)
T ss_pred             hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHH-----hCCceEEeccccCcHHHHHHHHHHHHhh
Confidence            44567899999999999999999999999999999877766555443     24578899999999999988874     


Q ss_pred             --cCCEEEecCCCCCCCC------------cchhhhHhHhhHHHHHHHHHHHhc-------CCCc--EEEEecCcceeee
Q 043792           98 --GCSGLFYSFEPPSDHS------------TYDELTAEVETMAAHNVLEACAQT-------NTVD--KVVFTSSLTAVVW  154 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~------------~~~~~~~~~n~~~~~~ll~~~~~~-------~~~~--~~v~~Ss~~~~~~  154 (294)
                        +.|..+|||+......            ++.++.+++|+.|+.|+++.....       ++-+  -+|+.-|..+ ..
T Consensus        81 fgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaa-fd  159 (260)
T KOG1199|consen   81 FGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAA-FD  159 (260)
T ss_pred             ccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeee-ec
Confidence              4699999988743211            111377899999999998864311       1223  3566666653 33


Q ss_pred             CCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc----ccc
Q 043792          155 NNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP----YLK  227 (294)
Q Consensus       155 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~----~~~  227 (294)
                      |..+    +                  ..|.+||.+.--+-.-.+.+   .|+++..+-||.+-.|.......    ++.
T Consensus       160 gq~g----q------------------aaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpekv~~fla  217 (260)
T KOG1199|consen  160 GQTG----Q------------------AAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEKVKSFLA  217 (260)
T ss_pred             Cccc----h------------------hhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHHHHHHHH
Confidence            3333    2                  78999998764333222222   38999999999886555322111    222


Q ss_pred             ccccccCCCccccccHHHHHHHHHhhhcCcCCCCeEEeec
Q 043792          228 GAAEMYEDGVMASVDLRFYVDAHICVFEDVSSYGRYLCFN  267 (294)
Q Consensus       228 ~~~~~~~~~~~~~v~v~D~a~~i~~~~~~~~~~~~~~~~~  267 (294)
                      ...+..    ...-|..+.+..+..+++++-.+|..+-.+
T Consensus       218 ~~ipfp----srlg~p~eyahlvqaiienp~lngevir~d  253 (260)
T KOG1199|consen  218 QLIPFP----SRLGHPHEYAHLVQAIIENPYLNGEVIRFD  253 (260)
T ss_pred             HhCCCc----hhcCChHHHHHHHHHHHhCcccCCeEEEec
Confidence            111111    115567888888888999887777654333

>PLN00106 malate dehydrogenase

Probab=99.30  E-value=1.2e-11  Score=105.55  Aligned_cols=175  Identities=13%  Similarity=0.056  Sum_probs=121.4

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      ..||.|||++|.+|+.++..|..++  .++..+++++..... .+   +.......  ...++.+..++.+.++++|+||
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a-~D---l~~~~~~~--~i~~~~~~~d~~~~l~~aDiVV   91 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVA-AD---VSHINTPA--QVRGFLGDDQLGDALKGADLVI   91 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeE-ch---hhhCCcCc--eEEEEeCCCCHHHHcCCCCEEE
Confidence            4699999999999999999999766  478998887622111 11   11111112  2234444455778899999999


Q ss_pred             ecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccch
Q 043792          104 YSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLW  183 (294)
Q Consensus       104 h~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  183 (294)
                      |+||.+........+.+..|+..+.++++.+.+. +.+.+|+++|--+......-    ...+.......+.      ..
T Consensus        92 itAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~-~p~aivivvSNPvD~~~~i~----t~~~~~~s~~p~~------~v  160 (323)
T PLN00106         92 IPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKH-CPNALVNIISNPVNSTVPIA----AEVLKKAGVYDPK------KL  160 (323)
T ss_pred             EeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeCCCccccHHHH----HHHHHHcCCCCcc------eE
Confidence            9999877655566789999999999999999999 88888888874321000000    0011122222223      67


Q ss_pred             hHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCC
Q 043792          184 HGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPD  218 (294)
Q Consensus       184 Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~  218 (294)
                      ||.++...+++-..++++.+++...++ +.|+|.+
T Consensus       161 iG~~~LDs~Rl~~~lA~~lgv~~~~V~-~~ViGeH  194 (323)
T PLN00106        161 FGVTTLDVVRANTFVAEKKGLDPADVD-VPVVGGH  194 (323)
T ss_pred             EEEecchHHHHHHHHHHHhCCChhheE-EEEEEeC
Confidence            999999999999999999999888885 5566665

>PRK06720 hypothetical protein; Provisional

Probab=99.30  E-value=1.2e-10  Score=90.66  Aligned_cols=126  Identities=11%  Similarity=-0.026  Sum_probs=83.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++++||||+|.||+.+++.|.++|++|.+++|+.+.......++  ........++.+|+++.+++.++++      
T Consensus        14 l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l--~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~   91 (169)
T PRK06720         14 LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEI--TNLGGEALFVSYDMEKQGDWQRVISITLNAF   91 (169)
T ss_pred             cCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH--HhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999998865544433322  1223456788999999988877653      


Q ss_pred             -cCCEEEecCCCCCCCCcc----hhhhHhHhhHHH----HHHHHHHHhc------CCCcEEEEecCcce
Q 043792           98 -GCSGLFYSFEPPSDHSTY----DELTAEVETMAA----HNVLEACAQT------NTVDKVVFTSSLTA  151 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~~----~~~~~~~n~~~~----~~ll~~~~~~------~~~~~~v~~Ss~~~  151 (294)
                       ++|++|||||........    ++.....|+.+.    ..+.....+.      ....||..+||.++
T Consensus        92 G~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (169)
T PRK06720         92 SRIDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQ  160 (169)
T ss_pred             CCCCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccc
Confidence             589999999864422111    112223334433    3333332222      24568888888763

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.25  E-value=6.1e-11  Score=92.95  Aligned_cols=102  Identities=15%  Similarity=0.167  Sum_probs=77.7

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc-------C
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG-------C   99 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-------~   99 (294)
                      |+++|||||||+|. +++.|.++|++|.+++|+++..+.+...   .....++.++.+|+.|.+++.+++++       +
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~---l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~i   76 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRE---STTPESITPLPLDYHDDDALKLAIKSTIEKNGPF   76 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHH---hhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            58999999998876 9999999999999999986655444431   11234688889999999999888763       3


Q ss_pred             CEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCc----EEEEecCc
Q 043792          100 SGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD----KVVFTSSL  149 (294)
Q Consensus       100 d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~----~~v~~Ss~  149 (294)
                      |.+|+.+                +..++.++.++|++. +++    +|+|+=.+
T Consensus        77 d~lv~~v----------------h~~~~~~~~~~~~~~-gv~~~~~~~~h~~gs  113 (177)
T PRK08309         77 DLAVAWI----------------HSSAKDALSVVCREL-DGSSETYRLFHVLGS  113 (177)
T ss_pred             eEEEEec----------------cccchhhHHHHHHHH-ccCCCCceEEEEeCC
Confidence            5555443                345678899999999 888    89986543

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.12  E-value=9.7e-10  Score=87.84  Aligned_cols=179  Identities=16%  Similarity=0.146  Sum_probs=117.1

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCC-----CeEEEEecCCCChhhHHHHHhhcc--CCCCeEEEECCCCChhHHHHHh-
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRG-----YTVHAALHNHGKLQCIEEELINYN--EEKKLKVFQADPFDYHSLVNAL-   96 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~l~~~~~~~~--~~~~v~~~~~Dl~~~~~~~~~~-   96 (294)
                      +.|.+||||+++.||..||.+|++..     .+++...|+.++.+..-..++...  ..-+++++..|+++..++..+. 
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            35789999999999999999999974     346666888877765433322222  2446889999999987766554 


Q ss_pred             ------ccCCEEEecCCCCCCCCcc---------------------------------hhhhHhHhhHHHHHHHHHHHhc
Q 043792           97 ------KGCSGLFYSFEPPSDHSTY---------------------------------DELTAEVETMAAHNVLEACAQT  137 (294)
Q Consensus        97 ------~~~d~Vih~a~~~~~~~~~---------------------------------~~~~~~~n~~~~~~ll~~~~~~  137 (294)
                            ...|.|+-+||......-+                                 ...+|+.|+.|...+++.+...
T Consensus        82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl  161 (341)
T KOG1478|consen   82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL  161 (341)
T ss_pred             HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence                  3579999998864422111                                 1278999999998888765543


Q ss_pred             ---CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEec
Q 043792          138 ---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSING  211 (294)
Q Consensus       138 ---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp  211 (294)
                         ...+.+|.+||..+   ...     ...+.+-......      .+|..||++.+.+-.+..++   .|+.-.++.|
T Consensus       162 l~~~~~~~lvwtSS~~a---~kk-----~lsleD~q~~kg~------~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~p  227 (341)
T KOG1478|consen  162 LCHSDNPQLVWTSSRMA---RKK-----NLSLEDFQHSKGK------EPYSSSKRLTDLLHVALNRNFKPLGINQYVVQP  227 (341)
T ss_pred             hhcCCCCeEEEEeeccc---ccc-----cCCHHHHhhhcCC------CCcchhHHHHHHHHHHHhccccccchhhhcccC
Confidence               23358999999632   111     1011111111222      78999999998665554433   2666777888


Q ss_pred             CceeCC
Q 043792          212 GLVMGP  217 (294)
Q Consensus       212 ~~i~G~  217 (294)
                      |.....
T Consensus       228 g~~tt~  233 (341)
T KOG1478|consen  228 GIFTTN  233 (341)
T ss_pred             ceeecc
Confidence            766433

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=99.07  E-value=1.1e-09  Score=94.91  Aligned_cols=98  Identities=28%  Similarity=0.289  Sum_probs=82.0

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      ||+|||+|+ |++|+.++..|+++| .+|++.+|+.++..++..   .  ...+++.++.|+.|.+.+.+++++.|+|||
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~---~--~~~~v~~~~vD~~d~~al~~li~~~d~VIn   74 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAE---L--IGGKVEALQVDAADVDALVALIKDFDLVIN   74 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHh---h--ccccceeEEecccChHHHHHHHhcCCEEEE
Confidence            689999999 999999999999998 999999999888777755   2  223799999999999999999999999999


Q ss_pred             cCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEec
Q 043792          105 SFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTS  147 (294)
Q Consensus       105 ~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~S  147 (294)
                      ++.+..                ..+++++|.+. ++ ++|=+|
T Consensus        75 ~~p~~~----------------~~~i~ka~i~~-gv-~yvDts   99 (389)
T COG1748          75 AAPPFV----------------DLTILKACIKT-GV-DYVDTS   99 (389)
T ss_pred             eCCchh----------------hHHHHHHHHHh-CC-CEEEcc
Confidence            998754                23678888888 75 444433

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=99.01  E-value=3.8e-09  Score=90.89  Aligned_cols=175  Identities=13%  Similarity=0.034  Sum_probs=105.9

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCC-------CeEEEEecCCCC--hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc
Q 043792           27 KTVCVMDASGHFASALVRRLLLRG-------YTVHAALHNHGK--LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK   97 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~--~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~   97 (294)
                      .||+||||+|++|++++..|+..+       ++|+++++++..  .+....+  +   .+.......|+....++.+.++
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~D--l---~d~~~~~~~~~~~~~~~~~~l~   77 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVME--L---QDCAFPLLKSVVATTDPEEAFK   77 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeee--h---hhccccccCCceecCCHHHHhC
Confidence            589999999999999999999854       589999986532  1110000  0   0000122235544566778889


Q ss_pred             cCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhh
Q 043792           98 GCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNL  176 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~  176 (294)
                      ++|+|||+|+.+......+.+.++.|+.....+.+.+.+. +.-..+|.+|...  . -.      -..+.+.....+..
T Consensus        78 ~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPv--D-~~------t~~~~k~~~~~~~~  148 (325)
T cd01336          78 DVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPA--N-TN------ALILLKYAPSIPKE  148 (325)
T ss_pred             CCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcH--H-HH------HHHHHHHcCCCCHH
Confidence            9999999999987666666799999999999999888877 2112455555311  0 00      00011111111100


Q ss_pred             hhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCC
Q 043792          177 CKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVT  220 (294)
Q Consensus       177 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~  220 (294)
                           ..-+.+....-++-..++++.+++...++-..|+|.+..
T Consensus       149 -----~ig~gt~LDs~R~r~~la~~l~v~~~~v~~~~V~GeHG~  187 (325)
T cd01336         149 -----NFTALTRLDHNRAKSQIALKLGVPVSDVKNVIIWGNHSS  187 (325)
T ss_pred             -----HEEeeehHHHHHHHHHHHHHhCcChhhceEeEEEEcCCC
Confidence                 111223334444555556667888887777778888743

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.91  E-value=7.5e-09  Score=88.80  Aligned_cols=171  Identities=11%  Similarity=0.023  Sum_probs=115.4

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCC-------eEEEEecCCCC--hhhHHHHHh-hc-cCCCCeEEEECCCCChhHHHHH
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGY-------TVHAALHNHGK--LQCIEEELI-NY-NEEKKLKVFQADPFDYHSLVNA   95 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~l~~~~~-~~-~~~~~v~~~~~Dl~~~~~~~~~   95 (294)
                      +||.|+|++|.+|+.++..|+..|.       ++..++.....  ......++. .. ....++++. .      ...+.
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~-~------~~~~~   75 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT-D------DPNVA   75 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe-c------CcHHH
Confidence            6999999999999999999998874       78888875432  221111100 00 000122221 1      22456


Q ss_pred             hccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCC--CcEEEEecCcceeeeCCCCCCCCCCCCCCCCC-C
Q 043792           96 LKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNT--VDKVVFTSSLTAVVWNNHRDNPTSHDFDERNW-S  172 (294)
Q Consensus        96 ~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~--~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~-~  172 (294)
                      ++++|+||.+||.+.....++.+.++.|+.....+.+.+.+. +  -..+|.+|...   .- ..    . .+.+... .
T Consensus        76 ~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~-~~~~~iiivvsNPv---D~-~t----~-~~~k~sg~~  145 (322)
T cd01338          76 FKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDV-ASRDVKVLVVGNPC---NT-NA----L-IAMKNAPDI  145 (322)
T ss_pred             hCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCCeEEEEecCcH---HH-HH----H-HHHHHcCCC
Confidence            789999999999877666677799999999999999999888 3  23455555311   00 00    0 0011111 1


Q ss_pred             ChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCC
Q 043792          173 DVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVT  220 (294)
Q Consensus       173 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~  220 (294)
                      .+.      ..||.+++..+++...+++..+++...+|...|||++..
T Consensus       146 p~~------~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG~  187 (322)
T cd01338         146 PPD------NFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHSP  187 (322)
T ss_pred             ChH------heEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCcc
Confidence            112      679999999999999999999999999999999999843

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=98.90  E-value=1.9e-07  Score=80.80  Aligned_cols=83  Identities=17%  Similarity=0.201  Sum_probs=61.0

Q ss_pred             CCCCeEEEeCCCchHHHH--HHHHHHHCCCeEEEEecCCCCh------------hhHHHHHhhccCCCCeEEEECCCCCh
Q 043792           24 NATKTVCVMDASGHFASA--LVRRLLLRGYTVHAALHNHGKL------------QCIEEELINYNEEKKLKVFQADPFDY   89 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~--l~~~L~~~g~~V~~~~r~~~~~------------~~l~~~~~~~~~~~~v~~~~~Dl~~~   89 (294)
                      ..+|++||||+++.+|.+  +++.| +.|.+|+++++..++.            +.+.+.  ....+..+..+.+|++++
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~--a~~~G~~a~~i~~DVss~  115 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKF--AKAAGLYAKSINGDAFSD  115 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHH--HHhcCCceEEEEcCCCCH
Confidence            446899999999999999  89999 9999999988643221            122221  112233467889999999


Q ss_pred             hHHHHHhc-------cCCEEEecCCCC
Q 043792           90 HSLVNALK-------GCSGLFYSFEPP  109 (294)
Q Consensus        90 ~~~~~~~~-------~~d~Vih~a~~~  109 (294)
                      +++.++++       ++|++||+++..
T Consensus       116 E~v~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        116 EIKQKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCccC
Confidence            88877764       479999997765

>PRK05086 malate dehydrogenase; Provisional

Probab=98.86  E-value=5.7e-08  Score=83.22  Aligned_cols=170  Identities=15%  Similarity=0.043  Sum_probs=105.5

Q ss_pred             CeEEEeCCCchHHHHHHHHHHH---CCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           27 KTVCVMDASGHFASALVRRLLL---RGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      |||+|+||+|.+|++++..|..   .++++.+++|++.......+   +... .....+.+  .+.+++.+.++++|+||
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alD---l~~~-~~~~~i~~--~~~~d~~~~l~~~DiVI   74 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVD---LSHI-PTAVKIKG--FSGEDPTPALEGADVVL   74 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehh---hhcC-CCCceEEE--eCCCCHHHHcCCCCEEE
Confidence            6899999999999999998855   24678888887432111111   1111 11122333  22344566778999999


Q ss_pred             ecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcce----eeeCCCCCCCCCCCCCCCCCCChhhhhh
Q 043792          104 YSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTA----VVWNNHRDNPTSHDFDERNWSDVNLCKK  179 (294)
Q Consensus       104 h~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~----~~~~~~~~~~~~~~~~e~~~~~~~~~~~  179 (294)
                      .++|........+.+.+..|.....++++++.+. +.+++|.+.|--+    +...       +........ ...    
T Consensus        75 itaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~-~~~~ivivvsNP~D~~t~~~~-------~~~~~~sg~-p~~----  141 (312)
T PRK05086         75 ISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKT-CPKACIGIITNPVNTTVAIAA-------EVLKKAGVY-DKN----  141 (312)
T ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccCchHHHHHHHH-------HHHHHhcCC-CHH----
Confidence            9999877666666689999999999999999999 8888888776321    0000       000000000 000    


Q ss_pred             ccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCC
Q 043792          180 FKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPD  218 (294)
Q Consensus       180 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~  218 (294)
                        ...|..-...-++-..+++..+++..-+. +.|+|.+
T Consensus       142 --rvig~~~Lds~R~~~~ia~~l~~~~~~v~-~~v~GeH  177 (312)
T PRK05086        142 --KLFGVTTLDVIRSETFVAELKGKQPGEVE-VPVIGGH  177 (312)
T ss_pred             --HEEeeecHHHHHHHHHHHHHhCCChhheE-EEEEEec
Confidence              22333333434555555666677777776 7788877

>PRK09620 hypothetical protein; Provisional

Probab=98.79  E-value=2.2e-08  Score=81.67  Aligned_cols=82  Identities=11%  Similarity=0.053  Sum_probs=56.6

Q ss_pred             CCCeEEEeCCC----------------chHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCC
Q 043792           25 ATKTVCVMDAS----------------GHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFD   88 (294)
Q Consensus        25 ~~~~vlItGat----------------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~   88 (294)
                      .+++||||+|.                ||+|++|+++|+++|++|+++++........     . .....+..+.++...
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~-----~-~~~~~~~~V~s~~d~   75 (229)
T PRK09620          2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPND-----I-NNQLELHPFEGIIDL   75 (229)
T ss_pred             CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcc-----c-CCceeEEEEecHHHH
Confidence            47899999886                9999999999999999999987642211000     0 001134455664433


Q ss_pred             hhHHHHHhc--cCCEEEecCCCCCCC
Q 043792           89 YHSLVNALK--GCSGLFYSFEPPSDH  112 (294)
Q Consensus        89 ~~~~~~~~~--~~d~Vih~a~~~~~~  112 (294)
                      .+.+.+++.  ++|+|||+|+.....
T Consensus        76 ~~~l~~~~~~~~~D~VIH~AAvsD~~  101 (229)
T PRK09620         76 QDKMKSIITHEKVDAVIMAAAGSDWV  101 (229)
T ss_pred             HHHHHHHhcccCCCEEEECcccccee
Confidence            456777774  689999999985543

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.75  E-value=3.6e-08  Score=80.68  Aligned_cols=93  Identities=17%  Similarity=0.227  Sum_probs=57.9

Q ss_pred             CCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCC--hhHHHHHhccCCEEEecCCCCC
Q 043792           33 DASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFD--YHSLVNALKGCSGLFYSFEPPS  110 (294)
Q Consensus        33 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~--~~~~~~~~~~~d~Vih~a~~~~  110 (294)
                      .+|||+|++|+++|+++|++|++++|......         ....+++++..+..+  .+.+.+.+.++|+|||+|+...
T Consensus        23 ~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~---------~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd   93 (229)
T PRK06732         23 HSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP---------EPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSD   93 (229)
T ss_pred             ccchHHHHHHHHHHHhCCCEEEEEECcccccC---------CCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCC
Confidence            56899999999999999999999987642110         011356666644322  2455566778999999999865


Q ss_pred             CCCcchhhhHhHhhHHHHHHHHHHHh
Q 043792          111 DHSTYDELTAEVETMAAHNVLEACAQ  136 (294)
Q Consensus       111 ~~~~~~~~~~~~n~~~~~~ll~~~~~  136 (294)
                      .....  ..-..++..+.++.+.+++
T Consensus        94 ~~~~~--~~~~~~~~~~~~v~~~~~~  117 (229)
T PRK06732         94 YTPVY--MTDLEEVSASDNLNEFLTK  117 (229)
T ss_pred             ceehh--hhhhhhhhhhhhhhhhhcc
Confidence            32211  1112334444555555543

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.73  E-value=6e-08  Score=86.10  Aligned_cols=76  Identities=32%  Similarity=0.439  Sum_probs=60.9

Q ss_pred             EEEeCCCchHHHHHHHHHHHCC-C-eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEecC
Q 043792           29 VCVMDASGHFASALVRRLLLRG-Y-TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSF  106 (294)
Q Consensus        29 vlItGatG~iG~~l~~~L~~~g-~-~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~a  106 (294)
                      |+|.|| |++|+.+++.|++++ . +|++.+|+.++.+.+...+    ...+++++..|+.|.+++.++++++|+||||+
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~   75 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL----LGDRVEAVQVDVNDPESLAELLRGCDVVINCA   75 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT------TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-S
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc----cccceeEEEEecCCHHHHHHHHhcCCEEEECC
Confidence            789999 999999999999986 4 8999999988766655411    34689999999999999999999999999999


Q ss_pred             CCC
Q 043792          107 EPP  109 (294)
Q Consensus       107 ~~~  109 (294)
                      ++.
T Consensus        76 gp~   78 (386)
T PF03435_consen   76 GPF   78 (386)
T ss_dssp             SGG
T ss_pred             ccc
Confidence            975

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.72  E-value=6.2e-08  Score=77.52  Aligned_cols=83  Identities=18%  Similarity=0.103  Sum_probs=65.3

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ..++++++|+||+|.+|+.+++.|++.|++|++++|+.++.+.+.+.+   ....+......|..+.+++.+.++++|+|
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~diV  101 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSL---RARFGEGVGAVETSDDAARAAAIKGADVV  101 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHH---HhhcCCcEEEeeCCCHHHHHHHHhcCCEE
Confidence            345689999999999999999999999999999999876665554421   11123456677888888899999999999


Q ss_pred             EecCCC
Q 043792          103 FYSFEP  108 (294)
Q Consensus       103 ih~a~~  108 (294)
                      |++.+.
T Consensus       102 i~at~~  107 (194)
T cd01078         102 FAAGAA  107 (194)
T ss_pred             EECCCC
Confidence            997553

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.71  E-value=1.1e-07  Score=78.83  Aligned_cols=94  Identities=16%  Similarity=0.198  Sum_probs=71.9

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCCEEEe
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCSGLFY  104 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~Vih  104 (294)
                      |+|||+||||. |+.|++.|.++|++|++..+.....+.+..        .+...+..+..|.+++.+++.  ++|+||+
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~--------~g~~~v~~g~l~~~~l~~~l~~~~i~~VID   71 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI--------HQALTVHTGALDPQELREFLKRHSIDILVD   71 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc--------cCCceEEECCCCHHHHHHHHHhcCCCEEEE
Confidence            68999999999 999999999999999999998765443332        123344455667788988886  4899999


Q ss_pred             cCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEE
Q 043792          105 SFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKV  143 (294)
Q Consensus       105 ~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~  143 (294)
                      ...+..             ...+.|+.++|.+. +++-+
T Consensus        72 AtHPfA-------------~~is~~a~~a~~~~-~ipyl   96 (256)
T TIGR00715        72 ATHPFA-------------AQITTNATAVCKEL-GIPYV   96 (256)
T ss_pred             cCCHHH-------------HHHHHHHHHHHHHh-CCcEE
Confidence            988643             24577888888888 77544

This enzyme was found to be a monomer by gel filtration.

>cd00704 MDH Malate dehydrogenase

Probab=98.71  E-value=2.6e-07  Score=79.43  Aligned_cols=163  Identities=11%  Similarity=0.028  Sum_probs=102.9

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCC-------CeEEEEecCC--CChhhHHHHHhhccCCCCeEEEECCCCCh---------
Q 043792           28 TVCVMDASGHFASALVRRLLLRG-------YTVHAALHNH--GKLQCIEEELINYNEEKKLKVFQADPFDY---------   89 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g-------~~V~~~~r~~--~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~---------   89 (294)
                      ||.||||+|.+|+.++..|+..|       +++..+++++  +..                +....|+.|.         
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~----------------~g~~~Dl~d~~~~~~~~~~   65 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKAL----------------EGVVMELQDCAFPLLKGVV   65 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCcc----------------ceeeeehhhhcccccCCcE
Confidence            79999999999999999998865       2588888875  322                2222233222         


Q ss_pred             --hHHHHHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcC-CCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           90 --HSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTN-TVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        90 --~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                        ....+.++++|+|||+||.+.....++.+.+..|+...+.+...+.+.. .-..+|.+|-..   . ...    ...+
T Consensus        66 i~~~~~~~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPv---D-~~t----~~~~  137 (323)
T cd00704          66 ITTDPEEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGNPA---N-TNA----LIAL  137 (323)
T ss_pred             EecChHHHhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCCcH---H-HHH----HHHH
Confidence              2456778899999999999887777777999999999999999998882 223455554311   0 000    0001


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCC
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVT  220 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~  220 (294)
                      ......++.      ...|.+....-++-...+++.+++..-+.-..|+|.+..
T Consensus       138 k~sg~~p~~------~vig~t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~  185 (323)
T cd00704         138 KNAPNLPPK------NFTALTRLDHNRAKAQVARKLGVRVSDVKNVIIWGNHSN  185 (323)
T ss_pred             HHcCCCCHH------HEEEeeHHHHHHHHHHHHHHhCcCHHHceeeeEEecccC
Confidence            111100111      233455555555555566666776666655667887743

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=98.69  E-value=4.1e-07  Score=68.67  Aligned_cols=113  Identities=18%  Similarity=0.157  Sum_probs=80.0

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCCChhhHHHHHhhc-cCC-CCeEEEECCCCChhHHHHHhccCCEE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELINY-NEE-KKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~~~-~~~-~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      |||.|+|++|.+|++++-.|...+  .++..++++++..+....++.-. ... ....+..   .+++    .++++|+|
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~----~~~~aDiv   73 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYE----ALKDADIV   73 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGG----GGTTESEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---cccc----ccccccEE
Confidence            689999999999999999999986  67999999866544332221111 111 1223333   2333    46789999


Q ss_pred             EecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCc-EEEEec
Q 043792          103 FYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD-KVVFTS  147 (294)
Q Consensus       103 ih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~v~~S  147 (294)
                      |-+++.+......+.+.++.|......+.+.+.+. +.+ .++.+|
T Consensus        74 vitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~-~p~~~vivvt  118 (141)
T PF00056_consen   74 VITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKY-APDAIVIVVT  118 (141)
T ss_dssp             EETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHH-STTSEEEE-S
T ss_pred             EEeccccccccccHHHHHHHhHhHHHHHHHHHHHh-CCccEEEEeC
Confidence            99999877666667799999999999999999988 433 344443

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=98.62  E-value=6.1e-06  Score=65.59  Aligned_cols=211  Identities=17%  Similarity=0.175  Sum_probs=120.1

Q ss_pred             CCCCCeEEEeCCC--chHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc---
Q 043792           23 SNATKTVCVMDAS--GHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK---   97 (294)
Q Consensus        23 ~~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---   97 (294)
                      ...+|++||+|-.  .-|+..+++.|.++|.++......+.-..++++   +......-.++++|+++.+++.++|.   
T Consensus         3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~---la~~~~s~~v~~cDV~~d~~i~~~f~~i~   79 (259)
T COG0623           3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEE---LAEELGSDLVLPCDVTNDESIDALFATIK   79 (259)
T ss_pred             ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHH---HHhhccCCeEEecCCCCHHHHHHHHHHHH
Confidence            4578999999964  579999999999999998887766533333333   22222234578999999999888875   


Q ss_pred             ----cCCEEEecCCCCCCC---Ccc----hh---hhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCC
Q 043792           98 ----GCSGLFYSFEPPSDH---STY----DE---LTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPT  162 (294)
Q Consensus        98 ----~~d~Vih~a~~~~~~---~~~----~~---~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~  162 (294)
                          ++|.++|+.+.....   ..+    ++   ..+++-.-+...+.++++.- .+-..+|-++     ++|....-|.
T Consensus        80 ~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLt-----Ylgs~r~vPn  154 (259)
T COG0623          80 KKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLT-----YLGSERVVPN  154 (259)
T ss_pred             HhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEE-----eccceeecCC
Confidence                469999997664411   111    11   22222223334444444433 1222344332     2222111111


Q ss_pred             CCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccccccC-----
Q 043792          163 SHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAAEMYE-----  234 (294)
Q Consensus       163 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~-----  234 (294)
                      .                  +..|.+|.+.|.-++.++.+.   |+++..+-.|.|    ......-+.+-..++.     
T Consensus       155 Y------------------NvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPI----rTLAasgI~~f~~~l~~~e~~  212 (259)
T COG0623         155 Y------------------NVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPI----RTLAASGIGDFRKMLKENEAN  212 (259)
T ss_pred             C------------------chhHHHHHHHHHHHHHHHHHhCccCeEEeeecccch----HHHHhhccccHHHHHHHHHhh
Confidence            1                  779999999999999888775   577776665544    1111110111001110     


Q ss_pred             CCccccccHHHHHHHHHhhhcC--cCCCCeE
Q 043792          235 DGVMASVDLRFYVDAHICVFED--VSSYGRY  263 (294)
Q Consensus       235 ~~~~~~v~v~D~a~~i~~~~~~--~~~~~~~  263 (294)
                      .....-+.++|+....+.++..  ...+|+.
T Consensus       213 aPl~r~vt~eeVG~tA~fLlSdLssgiTGei  243 (259)
T COG0623         213 APLRRNVTIEEVGNTAAFLLSDLSSGITGEI  243 (259)
T ss_pred             CCccCCCCHHHhhhhHHHHhcchhcccccce
Confidence            1111156688888887777754  3334543

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.55  E-value=1.3e-06  Score=75.17  Aligned_cols=165  Identities=11%  Similarity=0.009  Sum_probs=100.4

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCCC-------eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChh----------
Q 043792           28 TVCVMDASGHFASALVRRLLLRGY-------TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYH----------   90 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~----------   90 (294)
                      ||.|+|++|.+|+.++..|...+.       +++.+++++...              ..+....|+.|..          
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~--------------~a~g~~~Dl~d~~~~~~~~~~~~   66 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK--------------VLEGVVMELMDCAFPLLDGVVPT   66 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc--------------ccceeEeehhcccchhcCceecc
Confidence            689999999999999999988553       588888864321              1222223333322          


Q ss_pred             -HHHHHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcC-CCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           91 -SLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTN-TVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        91 -~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                       ...+.++++|+|||+||.+.....++.+.+..|+...+.+.+.+.+.. .-..+|.+|... -.   ..    ......
T Consensus        67 ~~~~~~~~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNPv-Dv---~t----~v~~~~  138 (324)
T TIGR01758        67 HDPAVAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNPA-NT---NA----LVLSNY  138 (324)
T ss_pred             CChHHHhCCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcH-HH---HH----HHHHHH
Confidence             345678899999999998776555566899999999999999998872 223455555311 00   00    000000


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCC
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVT  220 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~  220 (294)
                      .......      ..=..+....-++-...+++.+++...++-..|+|.+..
T Consensus       139 sg~~~~~------vig~gt~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~  184 (324)
T TIGR01758       139 APSIPPK------NFSALTRLDHNRALAQVAERAGVPVSDVKNVIIWGNHSS  184 (324)
T ss_pred             cCCCCcc------eEEEeeehHHHHHHHHHHHHhCCChhhceEeEEEECCCC
Confidence            0000000      111123333444445556667888887777788888744

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.48  E-value=6.3e-07  Score=76.97  Aligned_cols=75  Identities=25%  Similarity=0.288  Sum_probs=56.8

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHC-C-CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLR-G-YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCS  100 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~-g-~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d  100 (294)
                      ...+++|+||||+|+||+.+++.|+++ | .+++++.|+..+...+..++           ..+++.   .+.+++.++|
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el-----------~~~~i~---~l~~~l~~aD  217 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAEL-----------GGGKIL---SLEEALPEAD  217 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHh-----------ccccHH---hHHHHHccCC
Confidence            456789999999999999999999865 5 68999898866655554421           113332   4667888999


Q ss_pred             EEEecCCCCCC
Q 043792          101 GLFYSFEPPSD  111 (294)
Q Consensus       101 ~Vih~a~~~~~  111 (294)
                      +|||+++....
T Consensus       218 iVv~~ts~~~~  228 (340)
T PRK14982        218 IVVWVASMPKG  228 (340)
T ss_pred             EEEECCcCCcC
Confidence            99999987654

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=98.38  E-value=3.1e-06  Score=72.56  Aligned_cols=116  Identities=14%  Similarity=0.116  Sum_probs=76.1

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCC--eEEEEecCC--CChhhHHHHHh-h-ccCCCCeEEEECCCCChhHHHHHhccCC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGY--TVHAALHNH--GKLQCIEEELI-N-YNEEKKLKVFQADPFDYHSLVNALKGCS  100 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~--~~~~~l~~~~~-~-~~~~~~v~~~~~Dl~~~~~~~~~~~~~d  100 (294)
                      |||.|+|++|++|..++..|+..|+  +|++++|..  +..+.....+. . .......++...  .|   +. .++++|
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~--~d---~~-~l~~aD   74 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKIS--SD---LS-DVAGSD   74 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEEC--CC---HH-HhCCCC
Confidence            6899999999999999999999986  499999854  32222111000 0 000001111111  12   33 488999


Q ss_pred             EEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecC
Q 043792          101 GLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSS  148 (294)
Q Consensus       101 ~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss  148 (294)
                      +||-+++.+......+.+.++.|+.....+.+.+.+...-.++|.+++
T Consensus        75 iViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n  122 (309)
T cd05294          75 IVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN  122 (309)
T ss_pred             EEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            999999987665555568889999999999998887722125666665

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.37  E-value=1.8e-06  Score=72.78  Aligned_cols=86  Identities=22%  Similarity=0.177  Sum_probs=67.9

Q ss_pred             CeEEEeCCCchHHHHHHHHHHH----CCCeEEEEecCCCChhhHHHHHhhccC--CCCeEEEECCCCChhHHHHHhccCC
Q 043792           27 KTVCVMDASGHFASALVRRLLL----RGYTVHAALHNHGKLQCIEEELINYNE--EKKLKVFQADPFDYHSLVNALKGCS  100 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~l~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~~d  100 (294)
                      --++|.|||||-|..++++++.    .|...-+..|++.+.+.....+-....  -+..-++.+|..|++++.+..+.+.
T Consensus         6 yDvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~   85 (423)
T KOG2733|consen    6 YDVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQAR   85 (423)
T ss_pred             eeEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhE
Confidence            3589999999999999999999    678888889999887665443211111  1222388999999999999999999


Q ss_pred             EEEecCCCCCCC
Q 043792          101 GLFYSFEPPSDH  112 (294)
Q Consensus       101 ~Vih~a~~~~~~  112 (294)
                      +|+||+|+....
T Consensus        86 vivN~vGPyR~h   97 (423)
T KOG2733|consen   86 VIVNCVGPYRFH   97 (423)
T ss_pred             EEEeccccceec
Confidence            999999996643

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=98.36  E-value=2.8e-05  Score=66.80  Aligned_cols=116  Identities=13%  Similarity=0.107  Sum_probs=82.3

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCC--eEEEEecCCCChhhHHHHHhhc-cCCCCeEEEECCCCChhHHHHHhccC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGY--TVHAALHNHGKLQCIEEELINY-NEEKKLKVFQADPFDYHSLVNALKGC   99 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~~~   99 (294)
                      ....+||.|+|+ |.+|+.++-.|+..|.  ++..++++.+..+....++.-. ....++.+...   +   + +.++++
T Consensus         3 ~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~---~---~-~~~~~a   74 (315)
T PRK00066          3 KKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAG---D---Y-SDCKDA   74 (315)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeC---C---H-HHhCCC
Confidence            445689999998 9999999999999985  7999999877654433322111 01123333322   2   2 346899


Q ss_pred             CEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCc-EEEEec
Q 043792          100 SGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD-KVVFTS  147 (294)
Q Consensus       100 d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~v~~S  147 (294)
                      |+||-.++.+......+.+.+..|......+++.+.+. +.+ +++.+|
T Consensus        75 divIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~-~~~~~vivvs  122 (315)
T PRK00066         75 DLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMAS-GFDGIFLVAS  122 (315)
T ss_pred             CEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEcc
Confidence            99999999877766667799999999999999998887 433 444444

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.34  E-value=2.6e-06  Score=72.35  Aligned_cols=80  Identities=19%  Similarity=0.113  Sum_probs=61.2

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCe-EEEEecCC---CChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccC
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYT-VHAALHNH---GKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGC   99 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~---~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~   99 (294)
                      .++++++|+|| |.+|+.++..|++.|.+ |++++|+.   ++.+.+.+++  ......+.+...|+.+.+++.+.++.+
T Consensus       124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l--~~~~~~~~~~~~d~~~~~~~~~~~~~~  200 (289)
T PRK12548        124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKI--KQEVPECIVNVYDLNDTEKLKAEIASS  200 (289)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHH--hhcCCCceeEEechhhhhHHHhhhccC
Confidence            45689999999 89999999999999986 99999986   4455554432  111234456678888888888888889


Q ss_pred             CEEEecC
Q 043792          100 SGLFYSF  106 (294)
Q Consensus       100 d~Vih~a  106 (294)
                      |+|||+-
T Consensus       201 DilINaT  207 (289)
T PRK12548        201 DILVNAT  207 (289)
T ss_pred             CEEEEeC
Confidence            9999984

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.31  E-value=2.1e-06  Score=75.85  Aligned_cols=102  Identities=17%  Similarity=0.108  Sum_probs=70.3

Q ss_pred             CCCCCeEEEeCC----------------CchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCC
Q 043792           23 SNATKTVCVMDA----------------SGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADP   86 (294)
Q Consensus        23 ~~~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl   86 (294)
                      ...+++||||||                +|.+|.+++++|.++|++|++++++.+. .       .   ..+  +...|+
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~-~-------~---~~~--~~~~dv  251 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNL-P-------T---PAG--VKRIDV  251 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccc-c-------C---CCC--cEEEcc
Confidence            346799999999                9999999999999999999999876521 0       1   012  345689


Q ss_pred             CChhHHHHHhc----cCCEEEecCCCCCCCCcch--hh------hHhHhhHHHHHHHHHHHhc
Q 043792           87 FDYHSLVNALK----GCSGLFYSFEPPSDHSTYD--EL------TAEVETMAAHNVLEACAQT  137 (294)
Q Consensus        87 ~~~~~~~~~~~----~~d~Vih~a~~~~~~~~~~--~~------~~~~n~~~~~~ll~~~~~~  137 (294)
                      ++.+++.+++.    ++|++||+|+.........  .+      .....+.-+-.++..+++.
T Consensus       252 ~~~~~~~~~v~~~~~~~DilI~~Aav~d~~~~~~~~~Kikk~~~~~~l~L~~~pdIl~~l~~~  314 (399)
T PRK05579        252 ESAQEMLDAVLAALPQADIFIMAAAVADYRPATVAEGKIKKGEGELTLELVPNPDILAEVAAL  314 (399)
T ss_pred             CCHHHHHHHHHHhcCCCCEEEEcccccccccccccccCccCCCCCceEEEEeCcHHHHHHHhc
Confidence            99888776664    5899999998754332211  11      1223344556777777655

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=98.26  E-value=7.1e-06  Score=72.11  Aligned_cols=101  Identities=15%  Similarity=0.157  Sum_probs=66.2

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHC-CCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHH-HhccCC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLR-GYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVN-ALKGCS  100 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~-~~~~~d  100 (294)
                      +.+++||.|.||||++|..|++.|.++ +.++..+.++.+..+.+..   .     .......|+.+.+.+.. .++++|
T Consensus        35 ~~~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~---~-----~~~l~~~~~~~~~~~~~~~~~~~D  106 (381)
T PLN02968         35 SEEKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGS---V-----FPHLITQDLPNLVAVKDADFSDVD  106 (381)
T ss_pred             cccccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchh---h-----CccccCccccceecCCHHHhcCCC
Confidence            356789999999999999999999998 6889998876544333222   1     11122234433333332 257899


Q ss_pred             EEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcc
Q 043792          101 GLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLT  150 (294)
Q Consensus       101 ~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~  150 (294)
                      +||-+.+..                .+.+++..+ +. + .++|-+|+..
T Consensus       107 vVf~Alp~~----------------~s~~i~~~~-~~-g-~~VIDlSs~f  137 (381)
T PLN02968        107 AVFCCLPHG----------------TTQEIIKAL-PK-D-LKIVDLSADF  137 (381)
T ss_pred             EEEEcCCHH----------------HHHHHHHHH-hC-C-CEEEEcCchh
Confidence            999977531                355566665 34 5 4899999874

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=98.25  E-value=3.9e-05  Score=65.85  Aligned_cols=112  Identities=16%  Similarity=0.153  Sum_probs=80.5

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCCChhhHHHHHhhcc--CCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELINYN--EEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~~~~--~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      +||.|+|+ |.+|+.++..|+..|  ++|.+++++++..+.+..++.-..  ......+...   +.+    .++++|+|
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~---~~~----~l~~aDIV   72 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAG---DYS----DCKDADIV   72 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcC---CHH----HhCCCCEE
Confidence            47999997 999999999999999  689999998877655544321100  0112223222   222    35799999


Q ss_pred             EecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCc-EEEEec
Q 043792          103 FYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD-KVVFTS  147 (294)
Q Consensus       103 ih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~v~~S  147 (294)
                      |.+++.+.....++.+.++.|......+.+.+.+. +.+ .++.+|
T Consensus        73 Iitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~-~~~~~vivvs  117 (306)
T cd05291          73 VITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKAS-GFDGIFLVAS  117 (306)
T ss_pred             EEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEec
Confidence            99999877766667799999999999999999888 433 455544

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=98.21  E-value=1.5e-05  Score=65.18  Aligned_cols=75  Identities=16%  Similarity=0.205  Sum_probs=63.3

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHH-hccCCEEEec
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNA-LKGCSGLFYS  105 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~Vih~  105 (294)
                      |+++|.|+ |-+|+++++.|.++|++|++++++++..+....      .......+.+|-+++..|+++ +.++|+++-+
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~------~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~   73 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLA------DELDTHVVIGDATDEDVLEEAGIDDADAVVAA   73 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhh------hhcceEEEEecCCCHHHHHhcCCCcCCEEEEe
Confidence            68999998 999999999999999999999999877655222      112678999999999999988 7899999988


Q ss_pred             CCC
Q 043792          106 FEP  108 (294)
Q Consensus       106 a~~  108 (294)
                      -+.
T Consensus        74 t~~   76 (225)
T COG0569          74 TGN   76 (225)
T ss_pred             eCC
Confidence            774

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=98.21  E-value=4.2e-05  Score=65.30  Aligned_cols=173  Identities=14%  Similarity=0.044  Sum_probs=103.2

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           27 KTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      |||.|+|++|.+|++++-.|+.++  .++..++.+  ..+....+  +........+....  ...++.+.++++|+||-
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alD--L~~~~~~~~i~~~~--~~~~~y~~~~daDivvi   74 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAAD--LSHINTPAKVTGYL--GPEELKKALKGADVVVI   74 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehH--hHhCCCcceEEEec--CCCchHHhcCCCCEEEE
Confidence            589999999999999999999887  578888876  22111110  11111112222110  11235567889999999


Q ss_pred             cCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCc-EEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccch
Q 043792          105 SFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD-KVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLW  183 (294)
Q Consensus       105 ~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  183 (294)
                      +||.+......+.+.++.|......+.+.+.+. +.. .+|.+|-..-..-.--.    ........ ..+.      ..
T Consensus        75 taG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~-~p~a~vivvtNPvDv~~~i~t----~~~~~~s~-~p~~------rv  142 (310)
T cd01337          75 PAGVPRKPGMTRDDLFNINAGIVRDLATAVAKA-CPKALILIISNPVNSTVPIAA----EVLKKAGV-YDPK------RL  142 (310)
T ss_pred             eCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccCchhhHHHHHH----HHHHHhcC-CCHH------HE
Confidence            999987666677799999999999999999888 433 45554432100000000    00000110 0111      23


Q ss_pred             hHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCC
Q 043792          184 HGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPD  218 (294)
Q Consensus       184 Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~  218 (294)
                      .|..-...-++-...+++.+++..-++ +.|+|.+
T Consensus       143 iG~~~LDs~R~~~~la~~l~v~~~~V~-~~v~GeH  176 (310)
T cd01337         143 FGVTTLDVVRANTFVAELLGLDPAKVN-VPVIGGH  176 (310)
T ss_pred             EeeechHHHHHHHHHHHHhCcCHHHEE-EEEEecC
Confidence            344434445566666667787777777 7788888

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=98.18  E-value=2.9e-05  Score=66.79  Aligned_cols=172  Identities=12%  Similarity=0.067  Sum_probs=105.4

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCC-------eEEEEecCC--CChhhHHHHHh-hc-cCCCCeEEEECCCCChhHHHH
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGY-------TVHAALHNH--GKLQCIEEELI-NY-NEEKKLKVFQADPFDYHSLVN   94 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~--~~~~~l~~~~~-~~-~~~~~v~~~~~Dl~~~~~~~~   94 (294)
                      ..||.|+|++|++|++++..|+..|.       ++..++...  +.......++. .. ....++.+ .      ....+
T Consensus         3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-~------~~~~~   75 (323)
T TIGR01759         3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVA-T------TDPEE   75 (323)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEE-e------cChHH
Confidence            36899999999999999999998873       788888854  22322221110 00 00011111 1      12345


Q ss_pred             HhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCC-c-EEEEecCcceeeeCCCCCCCCCCCCCCCC-C
Q 043792           95 ALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTV-D-KVVFTSSLTAVVWNNHRDNPTSHDFDERN-W  171 (294)
Q Consensus        95 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~-~-~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~-~  171 (294)
                      .++++|+||.+||.+.....++.+.+..|+...+.+.+.+.+. +- . .++.+|-..   . ...    . ...+.. -
T Consensus        76 ~~~daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~-~~~~~iiivvsNPv---D-v~t----~-v~~k~s~g  145 (323)
T TIGR01759        76 AFKDVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKV-AKKDVKVLVVGNPA---N-TNA----L-IASKNAPD  145 (323)
T ss_pred             HhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCCeEEEEeCCcH---H-HHH----H-HHHHHcCC
Confidence            6789999999999887666677799999999999999999888 43 3 444444210   0 000    0 000111 0


Q ss_pred             CChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCC
Q 043792          172 SDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVT  220 (294)
Q Consensus       172 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~  220 (294)
                      ..+.      ...|.+.+..-++-...+++.+++...++-..|+|.+..
T Consensus       146 ~p~~------rViG~t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~  188 (323)
T TIGR01759       146 IPPK------NFSAMTRLDHNRAKYQLAAKAGVPVSDVKNVIIWGNHSN  188 (323)
T ss_pred             CCHH------HEEEeeHHHHHHHHHHHHHHhCcChHHeEEeEEEecCCC
Confidence            0011      234445555555556666667888888877778888743

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=98.15  E-value=7.5e-06  Score=68.53  Aligned_cols=82  Identities=13%  Similarity=0.049  Sum_probs=66.5

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      +...++|-||+||.|.-++++|..+|.+-....|+..+...+...+       +.++-..++.++..+.+.+...++|+|
T Consensus         5 ~e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L-------G~~~~~~p~~~p~~~~~~~~~~~VVln   77 (382)
T COG3268           5 REYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL-------GPEAAVFPLGVPAALEAMASRTQVVLN   77 (382)
T ss_pred             cceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc-------CccccccCCCCHHHHHHHHhcceEEEe
Confidence            3467999999999999999999999998877799988888777632       334444455568889999999999999


Q ss_pred             cCCCCCCCC
Q 043792          105 SFEPPSDHS  113 (294)
Q Consensus       105 ~a~~~~~~~  113 (294)
                      |+|+.....
T Consensus        78 cvGPyt~~g   86 (382)
T COG3268          78 CVGPYTRYG   86 (382)
T ss_pred             ccccccccc
Confidence            999976543

>PRK05442 malate dehydrogenase; Provisional

Probab=98.12  E-value=5.7e-05  Score=65.08  Aligned_cols=171  Identities=12%  Similarity=0.032  Sum_probs=104.0

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCC-------eEEEEecCCC--Chhh----HHHHHhhccCCCCeEEEECCCCChhHH
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGY-------TVHAALHNHG--KLQC----IEEELINYNEEKKLKVFQADPFDYHSL   92 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~--~~~~----l~~~~~~~~~~~~v~~~~~Dl~~~~~~   92 (294)
                      ++||.|+|++|.+|+.++-.|+..+.       ++..++.++.  +...    +.+..  .....++++. .      ..
T Consensus         4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~--~~~~~~~~i~-~------~~   74 (326)
T PRK05442          4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCA--FPLLAGVVIT-D------DP   74 (326)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhh--hhhcCCcEEe-c------Ch
Confidence            46999999999999999999988663       6888887543  2221    22200  0001122221 1      22


Q ss_pred             HHHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCC-CcEEEEecCcceeeeCCCCCCCCCCCCCCCCC
Q 043792           93 VNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNT-VDKVVFTSSLTAVVWNNHRDNPTSHDFDERNW  171 (294)
Q Consensus        93 ~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~  171 (294)
                      .+.++++|+||-+||.+.....++.+.+..|....+.+.+.+.++.+ -..+|.+|...   .- ..    . .+.+..+
T Consensus        75 y~~~~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPv---Dv-~t----~-v~~k~s~  145 (326)
T PRK05442         75 NVAFKDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGNPA---NT-NA----L-IAMKNAP  145 (326)
T ss_pred             HHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCch---HH-HH----H-HHHHHcC
Confidence            35678999999999987766667779999999999999999988522 23555555311   00 00    0 0001110


Q ss_pred             CChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCC
Q 043792          172 SDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDV  219 (294)
Q Consensus       172 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~  219 (294)
                      .-|.   +  ...|.+-+..-++-...+++.+++...++...|+|.+.
T Consensus       146 g~p~---~--rViG~t~LDs~R~r~~la~~l~v~~~~V~~~vV~GeHG  188 (326)
T PRK05442        146 DLPA---E--NFTAMTRLDHNRALSQLAAKAGVPVADIKKMTVWGNHS  188 (326)
T ss_pred             CCCH---H--HEEeeeHHHHHHHHHHHHHHhCcChHHeEEeEEEECCc
Confidence            0000   0  23444555555666666667788878777667788874

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=98.12  E-value=3.8e-05  Score=68.42  Aligned_cols=174  Identities=12%  Similarity=0.069  Sum_probs=107.3

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHC-------CC--eEEEEecCCCChhhHHHHHhhc--cCCCCeEEEECCCCChhHHHH
Q 043792           26 TKTVCVMDASGHFASALVRRLLLR-------GY--TVHAALHNHGKLQCIEEELINY--NEEKKLKVFQADPFDYHSLVN   94 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~-------g~--~V~~~~r~~~~~~~l~~~~~~~--~~~~~v~~~~~Dl~~~~~~~~   94 (294)
                      .-||.|+|++|.+|.+++-.|+..       +.  ++..++++.+..+....++.-.  ....++.+...   +    .+
T Consensus       100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~---~----ye  172 (444)
T PLN00112        100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGID---P----YE  172 (444)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecC---C----HH
Confidence            469999999999999999999988       63  7888888877765443322100  00112222221   2    24


Q ss_pred             HhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHh-cCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCC
Q 043792           95 ALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQ-TNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSD  173 (294)
Q Consensus        95 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~-~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~  173 (294)
                      .++++|+||-.||.+......+.+.++.|+...+.+.+.+.+ .+.-..+|.+|--.-..    .    ....... ...
T Consensus       173 ~~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNPvDv~----t----~v~~k~s-g~~  243 (444)
T PLN00112        173 VFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGNPCNTN----A----LICLKNA-PNI  243 (444)
T ss_pred             HhCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCcHHHH----H----HHHHHHc-CCC
Confidence            568999999999998776667779999999999999999988 42223465555321000    0    0000000 000


Q ss_pred             hhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCC
Q 043792          174 VNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVT  220 (294)
Q Consensus       174 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~  220 (294)
                      +.     +..-..+.+..-++-...+++.+++...+.-..|+|.+..
T Consensus       244 ~~-----rViGtgT~LDsaR~r~~LA~~l~V~~~~V~~~~V~GeHGd  285 (444)
T PLN00112        244 PA-----KNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHST  285 (444)
T ss_pred             Cc-----ceEEeeccHHHHHHHHHHHHHhCcCHHHcccceEEecCCC
Confidence            00     0222233444445555566677888888877888998744

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=98.11  E-value=5.5e-05  Score=64.72  Aligned_cols=114  Identities=17%  Similarity=0.140  Sum_probs=77.6

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCCC--eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEec
Q 043792           28 TVCVMDASGHFASALVRRLLLRGY--TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYS  105 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~  105 (294)
                      ||.|+|++|.+|++++-.|+..+.  ++..+++++.. ....+   +.......++....  +.+++.+.++++|+||-+
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~-g~a~D---L~~~~~~~~i~~~~--~~~~~~~~~~daDivvit   74 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAA-GVAAD---LSHIPTAASVKGFS--GEEGLENALKGADVVVIP   74 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCc-EEEch---hhcCCcCceEEEec--CCCchHHHcCCCCEEEEe
Confidence            689999999999999999988874  78888876621 11111   11111112222101  112355678999999999


Q ss_pred             CCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCc-EEEEecC
Q 043792          106 FEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD-KVVFTSS  148 (294)
Q Consensus       106 a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~v~~Ss  148 (294)
                      ||.+......+.+.+..|....+.+.+.+.+. +.+ .+|.+|-
T Consensus        75 aG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~-~p~~iiivvsN  117 (312)
T TIGR01772        75 AGVPRKPGMTRDDLFNVNAGIVKDLVAAVAES-CPKAMILVITN  117 (312)
T ss_pred             CCCCCCCCccHHHHHHHhHHHHHHHHHHHHHh-CCCeEEEEecC
Confidence            99877666667799999999999999999888 433 3555443

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK06223 malate dehydrogenase; Reviewed

Probab=98.09  E-value=4.6e-05  Score=65.53  Aligned_cols=114  Identities=16%  Similarity=0.151  Sum_probs=75.4

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHh-h-ccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELI-N-YNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~-~-~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      |+||.|+|+ |.+|+.++..|+..|. +|.+++++++..+.....+. . .......++. .. .|   + +.++++|+|
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~-~~-~d---~-~~~~~aDiV   74 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKIT-GT-ND---Y-EDIAGSDVV   74 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEE-eC-CC---H-HHHCCCCEE
Confidence            579999999 9999999999999875 89999997765433221100 0 0000011111 10 12   3 346899999


Q ss_pred             EecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCc-EEEEec
Q 043792          103 FYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD-KVVFTS  147 (294)
Q Consensus       103 ih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~v~~S  147 (294)
                      |.+++.+........+.+.-|+.....+++.+.+. ..+ .+|.+|
T Consensus        75 ii~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~-~~~~~viv~t  119 (307)
T PRK06223         75 VITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKY-APDAIVIVVT  119 (307)
T ss_pred             EECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEec
Confidence            99998776555555577788999899998888777 333 455554

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.07  E-value=9.8e-06  Score=66.29  Aligned_cols=65  Identities=12%  Similarity=0.123  Sum_probs=45.7

Q ss_pred             eCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHh-------ccCCEEEe
Q 043792           32 MDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNAL-------KGCSGLFY  104 (294)
Q Consensus        32 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~-------~~~d~Vih  104 (294)
                      -.++|+||+++++.|+++|++|+++++...    +..          .....+|+.+.++..+++       .++|++||
T Consensus        21 N~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~----l~~----------~~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVn   86 (227)
T TIGR02114        21 NHSTGHLGKIITETFLSAGHEVTLVTTKRA----LKP----------EPHPNLSIREIETTKDLLITLKELVQEHDILIH   86 (227)
T ss_pred             CCcccHHHHHHHHHHHHCCCEEEEEcChhh----ccc----------ccCCcceeecHHHHHHHHHHHHHHcCCCCEEEE
Confidence            345899999999999999999999876321    100          011346887776665543       35799999


Q ss_pred             cCCCCC
Q 043792          105 SFEPPS  110 (294)
Q Consensus       105 ~a~~~~  110 (294)
                      +||...
T Consensus        87 nAgv~d   92 (227)
T TIGR02114        87 SMAVSD   92 (227)
T ss_pred             CCEecc
Confidence            998644

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=98.01  E-value=3.7e-05  Score=75.14  Aligned_cols=78  Identities=15%  Similarity=0.092  Sum_probs=62.5

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCC-Ce-------------EEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCCh
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRG-YT-------------VHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDY   89 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~-------------V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~   89 (294)
                      ..+++|+|+|+ |++|+.+++.|.+.+ .+             |.+.+++.+..+.+.+.      .++++.+..|+.|.
T Consensus       567 ~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~------~~~~~~v~lDv~D~  639 (1042)
T PLN02819        567 KKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEG------IENAEAVQLDVSDS  639 (1042)
T ss_pred             ccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHh------cCCCceEEeecCCH
Confidence            45789999998 999999999998753 33             77777777666655541      13677899999999


Q ss_pred             hHHHHHhccCCEEEecCCC
Q 043792           90 HSLVNALKGCSGLFYSFEP  108 (294)
Q Consensus        90 ~~~~~~~~~~d~Vih~a~~  108 (294)
                      +++.++++++|+||.+...
T Consensus       640 e~L~~~v~~~DaVIsalP~  658 (1042)
T PLN02819        640 ESLLKYVSQVDVVISLLPA  658 (1042)
T ss_pred             HHHHHhhcCCCEEEECCCc
Confidence            9999999999999999665

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=98.01  E-value=0.00025  Score=60.92  Aligned_cols=103  Identities=16%  Similarity=0.145  Sum_probs=73.0

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCCChhhHHHHHh-hccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELI-NYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~-~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      |||.|+|+ |.+|..++..|+.+|  .+|.+++++.+..+.....+. .........+...   +   + +.++++|+||
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~---d---~-~~l~~aDiVi   72 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAG---D---Y-ADCKGADVVV   72 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeC---C---H-HHhCCCCEEE
Confidence            58999998 999999999999999  689999998765543111110 1011112222222   2   2 3478999999


Q ss_pred             ecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhc
Q 043792          104 YSFEPPSDHSTYDELTAEVETMAAHNVLEACAQT  137 (294)
Q Consensus       104 h~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~  137 (294)
                      -+++..........+....|+.....+.+.+.+.
T Consensus        73 ita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~  106 (308)
T cd05292          73 ITAGANQKPGETRLDLLKRNVAIFKEIIPQILKY  106 (308)
T ss_pred             EccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999876655555688889999999999988887

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PTZ00117 malate dehydrogenase; Provisional

Probab=98.01  E-value=8.3e-05  Score=64.14  Aligned_cols=116  Identities=12%  Similarity=0.127  Sum_probs=78.4

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCChhhHHHHHhhccC--CCCeEEEECCCCChhHHHHHhccCCE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEEELINYNE--EKKLKVFQADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~~d~  101 (294)
                      +.+||.|+|| |.+|+.++..|...| .++..++++++..+....++.....  ....++..     ..+++ .++++|+
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~-----~~d~~-~l~~ADi   76 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILG-----TNNYE-DIKDSDV   76 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEe-----CCCHH-HhCCCCE
Confidence            4579999998 999999999999888 6888889877654321111101000  01112211     12244 6689999


Q ss_pred             EEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcE-EEEecC
Q 043792          102 LFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDK-VVFTSS  148 (294)
Q Consensus       102 Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~-~v~~Ss  148 (294)
                      ||.+++..........+.+..|......+.+.+.+. +.+. +|++|-
T Consensus        77 VVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~-~p~a~vivvsN  123 (319)
T PTZ00117         77 VVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKY-CPNAFVICVTN  123 (319)
T ss_pred             EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecC
Confidence            999998877665566688899999999999998888 4333 666554

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=98.00  E-value=3.6e-05  Score=66.83  Aligned_cols=93  Identities=15%  Similarity=0.134  Sum_probs=59.0

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCe---EEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYT---VHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      +++|+|.||||++|+.|++.|.+++|.   +..+.+..+..+.+.    +    .+.+....|+.+.     .+.++|+|
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~----~----~g~~i~v~d~~~~-----~~~~vDvV   67 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELS----F----KGKELKVEDLTTF-----DFSGVDIA   67 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeee----e----CCceeEEeeCCHH-----HHcCCCEE
Confidence            479999999999999999999998764   477776654332221    1    1234444565432     23689999


Q ss_pred             EecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792          103 FYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus       103 ih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      |-+.+...                +..+.....+. ++ ++|=+|+.
T Consensus        68 f~A~g~g~----------------s~~~~~~~~~~-G~-~VIDlS~~   96 (334)
T PRK14874         68 LFSAGGSV----------------SKKYAPKAAAA-GA-VVIDNSSA   96 (334)
T ss_pred             EECCChHH----------------HHHHHHHHHhC-CC-EEEECCch
Confidence            98875321                33344444455 65 66666764

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=97.99  E-value=0.00035  Score=59.77  Aligned_cols=168  Identities=15%  Similarity=0.132  Sum_probs=101.9

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCCChhhHHHHHhh-ccC--CCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           28 TVCVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELIN-YNE--EKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~~-~~~--~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ||.|+|+ |.+|+.++..|+.++  -++..++.+.+..+....++.- ...  ..++++..+|       .+.++++|+|
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~-------y~~~~~aDiv   72 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD-------YDDCADADII   72 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC-------HHHhCCCCEE
Confidence            6889998 999999999999887  4788888876655433222111 111  1234444433       2457899999


Q ss_pred             EecCCCCCCCCcc--hhhhHhHhhHHHHHHHHHHHhcCCCcEE-EEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhh
Q 043792          103 FYSFEPPSDHSTY--DELTAEVETMAAHNVLEACAQTNTVDKV-VFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKK  179 (294)
Q Consensus       103 ih~a~~~~~~~~~--~~~~~~~n~~~~~~ll~~~~~~~~~~~~-v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~  179 (294)
                      |-.||.+......  +.+.+..|....+.+.+.+.++ +..-+ +.+|-..- .   ..    ........ ..+.    
T Consensus        73 vitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~-~p~~i~ivvsNPvD-v---~t----~~~~k~sg-~p~~----  138 (307)
T cd05290          73 VITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKV-TKEAVIILITNPLD-I---AV----YIAATEFD-YPAN----  138 (307)
T ss_pred             EECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEecCcHH-H---HH----HHHHHHhC-cChh----
Confidence            9999987655544  3688999999999999999988 54334 44332110 0   00    00000000 0000    


Q ss_pred             ccchhHh-hHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCC
Q 043792          180 FKLWHGL-SKTLAEKTAWALAMDRGISMVSINGGLVMGPDVT  220 (294)
Q Consensus       180 ~~~~Y~~-sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~  220 (294)
                        ...|. +-+..-++-...+++.+++...++.. |+|.+..
T Consensus       139 --rviG~gt~LDs~R~~~~la~~l~v~~~~V~~~-ViGeHGd  177 (307)
T cd05290         139 --KVIGTGTMLDTARLRRIVADKYGVDPKNVTGY-VLGEHGS  177 (307)
T ss_pred             --heecccchHHHHHHHHHHHHHhCCCcccEEEE-EEecCCC
Confidence              22333 34444555555666678888888765 8888743

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=97.99  E-value=0.0004  Score=59.92  Aligned_cols=116  Identities=9%  Similarity=0.089  Sum_probs=76.7

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHh--hccCCCCeEEEECCCCChhHHHHHhccCCE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELI--NYNEEKKLKVFQADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~--~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~  101 (294)
                      +++||.|+|| |.+|+.++..++..|. +|+.++.+++........+.  ........++...  .|   + +.++++|+
T Consensus         5 ~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~--~d---~-~~l~~aDi   77 (321)
T PTZ00082          5 KRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGT--NN---Y-EDIAGSDV   77 (321)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEEC--CC---H-HHhCCCCE
Confidence            4579999996 9999999999999995 88888988765421111000  0011112233321  12   2 35689999


Q ss_pred             EEecCCCCCCCCc-----chhhhHhHhhHHHHHHHHHHHhcCCCc-EEEEecC
Q 043792          102 LFYSFEPPSDHST-----YDELTAEVETMAAHNVLEACAQTNTVD-KVVFTSS  148 (294)
Q Consensus       102 Vih~a~~~~~~~~-----~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~v~~Ss  148 (294)
                      ||.+++.......     ...+.+..|+.....+++.+.+. +.+ .++..|-
T Consensus        78 VI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~-~p~a~~iv~sN  129 (321)
T PTZ00082         78 VIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKY-CPNAFVIVITN  129 (321)
T ss_pred             EEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecC
Confidence            9999987664444     44577888999889999988888 434 5666554

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.99  E-value=3.3e-06  Score=63.32  Aligned_cols=78  Identities=18%  Similarity=0.178  Sum_probs=58.4

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCe-EEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYT-VHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~  101 (294)
                      +.++++++|.|+ |..|+.++..|.+.|.+ |+++.|+.++.+.+.+.+    ....+.++..     +++.+.+.++|+
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~----~~~~~~~~~~-----~~~~~~~~~~Di   78 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEF----GGVNIEAIPL-----EDLEEALQEADI   78 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH----TGCSEEEEEG-----GGHCHHHHTESE
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc----CccccceeeH-----HHHHHHHhhCCe
Confidence            446799999998 88999999999999976 999999988888877632    1223444433     335567788999


Q ss_pred             EEecCCCCC
Q 043792          102 LFYSFEPPS  110 (294)
Q Consensus       102 Vih~a~~~~  110 (294)
                      ||++.+...
T Consensus        79 vI~aT~~~~   87 (135)
T PF01488_consen   79 VINATPSGM   87 (135)
T ss_dssp             EEE-SSTTS
T ss_pred             EEEecCCCC
Confidence            999966544

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.98  E-value=0.00021  Score=62.01  Aligned_cols=108  Identities=15%  Similarity=0.154  Sum_probs=69.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCC---------------------ChhhHHHHHhhccCCCCeEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHG---------------------KLQCIEEELINYNEEKKLKV   81 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~---------------------~~~~l~~~~~~~~~~~~v~~   81 (294)
                      .+..+|+|.|+ |.+|++++..|...|. ++++++++.-                     +.+...+.++.....-+++.
T Consensus        22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~  100 (339)
T PRK07688         22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEA  100 (339)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEE
Confidence            34679999998 9999999999999997 7888887531                     11111221111112223556


Q ss_pred             EECCCCChhHHHHHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcc
Q 043792           82 FQADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLT  150 (294)
Q Consensus        82 ~~~Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~  150 (294)
                      +..+++ .+.+.++++++|+||.+...               ...-..+-++|.+. ++ .+|+.++.+
T Consensus       101 ~~~~~~-~~~~~~~~~~~DlVid~~Dn---------------~~~r~~ln~~~~~~-~i-P~i~~~~~g  151 (339)
T PRK07688        101 IVQDVT-AEELEELVTGVDLIIDATDN---------------FETRFIVNDAAQKY-GI-PWIYGACVG  151 (339)
T ss_pred             EeccCC-HHHHHHHHcCCCEEEEcCCC---------------HHHHHHHHHHHHHh-CC-CEEEEeeee
Confidence            666764 45677888999999998542               12223456677777 65 577766654

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=97.97  E-value=0.00028  Score=60.60  Aligned_cols=114  Identities=11%  Similarity=0.037  Sum_probs=77.9

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCCChhhHHHHHhhcc-CCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELINYN-EEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      .+||.|+|+ |.+|+.++-.|+..|  .++..++.+.+..+....++.-.. ......+...  .|   ++ .++++|+|
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~d---y~-~~~~adiv   75 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KD---YS-VTANSKVV   75 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CC---HH-HhCCCCEE
Confidence            469999997 999999999998887  578888887765543322211111 1111123321  12   23 36899999


Q ss_pred             EecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCc-EEEEec
Q 043792          103 FYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD-KVVFTS  147 (294)
Q Consensus       103 ih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~v~~S  147 (294)
                      |-++|.+.....++.+.++.|+.....+.+.+.+. +.+ .++.+|
T Consensus        76 vitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~-~p~~~vivvs  120 (312)
T cd05293          76 IVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKY-SPNAILLVVS  120 (312)
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEcc
Confidence            99999877655666789999999999999999888 432 455554

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.96  E-value=0.00024  Score=61.65  Aligned_cols=108  Identities=15%  Similarity=0.135  Sum_probs=68.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCC---------------------ChhhHHHHHhhccCCCCeEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHG---------------------KLQCIEEELINYNEEKKLKV   81 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~---------------------~~~~l~~~~~~~~~~~~v~~   81 (294)
                      .+.++|+|.|+ |.+|+++++.|...|. ++++++++.-                     +.+.+.+.++.....-+++.
T Consensus        22 L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~  100 (338)
T PRK12475         22 IREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVP  100 (338)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEE
Confidence            34679999998 7799999999999996 7888887531                     11222222211122334556


Q ss_pred             EECCCCChhHHHHHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcc
Q 043792           82 FQADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLT  150 (294)
Q Consensus        82 ~~~Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~  150 (294)
                      +..|++ .+.+.++++++|+||.+....           +.+    ..+-+.|.+. +++ +|+.+..+
T Consensus       101 ~~~~~~-~~~~~~~~~~~DlVid~~D~~-----------~~r----~~in~~~~~~-~ip-~i~~~~~g  151 (338)
T PRK12475        101 VVTDVT-VEELEELVKEVDLIIDATDNF-----------DTR----LLINDLSQKY-NIP-WIYGGCVG  151 (338)
T ss_pred             EeccCC-HHHHHHHhcCCCEEEEcCCCH-----------HHH----HHHHHHHHHc-CCC-EEEEEecc
Confidence            677774 456888899999999987421           111    2244566666 754 66655443

>cd05295 MDH_like Malate dehydrogenase-like

Probab=97.95  E-value=0.00011  Score=65.42  Aligned_cols=174  Identities=16%  Similarity=0.036  Sum_probs=104.4

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHH---CC--Ce--EEEEec--CCCChhhHHHHHhh-c-cCCCCeEEEECCCCChhHHHH
Q 043792           26 TKTVCVMDASGHFASALVRRLLL---RG--YT--VHAALH--NHGKLQCIEEELIN-Y-NEEKKLKVFQADPFDYHSLVN   94 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~---~g--~~--V~~~~r--~~~~~~~l~~~~~~-~-~~~~~v~~~~~Dl~~~~~~~~   94 (294)
                      .-+|+||||+|.||.+|+-.++.   -|  ..  +..++.  ..+..+....++.- . .....+.+.. |      ..+
T Consensus       123 p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~~-~------~~e  195 (452)
T cd05295         123 PLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVTT-D------LDV  195 (452)
T ss_pred             ceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEEE-C------CHH
Confidence            36899999999999999999987   24  22  444455  23333222221100 0 0111233332 1      235


Q ss_pred             HhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCC--cEEEEecCcceeeeCCCCCCCCCCCCCCCCCC
Q 043792           95 ALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTV--DKVVFTSSLTAVVWNNHRDNPTSHDFDERNWS  172 (294)
Q Consensus        95 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~--~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~  172 (294)
                      .++++|+||-+++.+......+.+..+.|......+.+++.+. ..  .+++.+.|--  .. ...    . .+....+.
T Consensus       196 a~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~-a~~~~~VlVv~tNP--vD-~~t----~-i~~k~apg  266 (452)
T cd05295         196 AFKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKN-AKEDVKVIVAGRTF--LN-LKT----S-ILIKYAPS  266 (452)
T ss_pred             HhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHh-CCCCCeEEEEeCCc--HH-HHH----H-HHHHHcCC
Confidence            6789999999999887776777799999999999999999888 32  3555554310  00 000    0 00011100


Q ss_pred             ChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCC
Q 043792          173 DVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVT  220 (294)
Q Consensus       173 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~  220 (294)
                      -|.     ....|.+....-++....+++.+++...|+-..|+|.+..
T Consensus       267 iP~-----~rVig~gtlds~R~r~~LA~kl~V~~~~V~~~~VwGeHG~  309 (452)
T cd05295         267 IPR-----KNIIAVARLQENRAKALLARKLNVNSAGIKDVIVWGNIGG  309 (452)
T ss_pred             CCH-----HHEEEecchHHHHHHHHHHHHhCcCHHHceeeEEEEccCC
Confidence            000     0345555566556666677777888888888888898744

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.94  E-value=0.00018  Score=52.79  Aligned_cols=97  Identities=18%  Similarity=0.156  Sum_probs=56.6

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCC-CeEEEE-ecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEec
Q 043792           28 TVCVMDASGHFASALVRRLLLRG-YTVHAA-LHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYS  105 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g-~~V~~~-~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~  105 (294)
                      ||.|+||||++|+.|++.|.+.. +++..+ .++.+....+............+.+..   .+.+    .+.++|+||.|
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~Dvvf~a   73 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED---ADPE----ELSDVDVVFLA   73 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE---TSGH----HHTTESEEEE-
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee---cchh----HhhcCCEEEec
Confidence            69999999999999999999964 565555 444434444444110000111222222   3333    23789999999


Q ss_pred             CCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792          106 FEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus       106 a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      .+.                .....+...+.+. ++ ++|=+|+.
T Consensus        74 ~~~----------------~~~~~~~~~~~~~-g~-~ViD~s~~   99 (121)
T PF01118_consen   74 LPH----------------GASKELAPKLLKA-GI-KVIDLSGD   99 (121)
T ss_dssp             SCH----------------HHHHHHHHHHHHT-TS-EEEESSST
T ss_pred             Cch----------------hHHHHHHHHHhhC-Cc-EEEeCCHH
Confidence            662                1234455555666 76 67766664

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.94  E-value=0.0001  Score=62.41  Aligned_cols=170  Identities=19%  Similarity=0.094  Sum_probs=101.2

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCCChhhHHHHHh-hc-cCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELI-NY-NEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~-~~-~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      +||.|+|+ |.+|+.++-.|+.++  .++..++...+..+....++. .. ..... ..+.+| .+    .+.++++|+|
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~-~~i~~~-~~----y~~~~~aDiV   73 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSD-VKITGD-GD----YEDLKGADIV   73 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCc-eEEecC-CC----hhhhcCCCEE
Confidence            58999999 999999999998775  578888988554433222110 00 00111 122222 12    3356799999


Q ss_pred             EecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccc
Q 043792          103 FYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL  182 (294)
Q Consensus       103 ih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  182 (294)
                      +-.||.+......+.+.++.|......+.+.+.+. +.+-++.+-|--  +. ...    . ...+.......     +-
T Consensus        74 vitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~-~~d~ivlVvtNP--vD-~~t----y-~~~k~sg~p~~-----rv  139 (313)
T COG0039          74 VITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKY-APDAIVLVVTNP--VD-ILT----Y-IAMKFSGFPKN-----RV  139 (313)
T ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-CCCeEEEEecCc--HH-HHH----H-HHHHhcCCCcc-----ce
Confidence            99999998888888899999999999999999888 544444333210  00 000    0 00000000000     02


Q ss_pred             hhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCC
Q 043792          183 WHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPD  218 (294)
Q Consensus       183 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~  218 (294)
                      .-+.+.+..-++-...+++.+++..-++.. |.|.+
T Consensus       140 ig~gt~LDsaR~~~~lae~~~v~~~~V~~~-ViGeH  174 (313)
T COG0039         140 IGSGTVLDSARFRTFLAEKLGVSPKDVHAY-VIGEH  174 (313)
T ss_pred             ecccchHHHHHHHHHHHHHhCCChhHceee-EeccC
Confidence            334455555666666666777777776644 45544

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=97.93  E-value=4.7e-05  Score=55.37  Aligned_cols=70  Identities=16%  Similarity=0.243  Sum_probs=57.9

Q ss_pred             EEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHH-hccCCEEEecCC
Q 043792           29 VCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNA-LKGCSGLFYSFE  107 (294)
Q Consensus        29 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~Vih~a~  107 (294)
                      |+|.|. |-+|..+++.|.+.+++|++++++++..+.+..        .++.++.+|.++++.++++ +++++.|+-+..
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~--------~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~   71 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELRE--------EGVEVIYGDATDPEVLERAGIEKADAVVILTD   71 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH--------TTSEEEES-TTSHHHHHHTTGGCESEEEEESS
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHh--------cccccccccchhhhHHhhcCccccCEEEEccC
Confidence            678898 789999999999988899999999877777666        2689999999999999876 567898887766

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.93  E-value=6.8e-05  Score=65.32  Aligned_cols=99  Identities=16%  Similarity=0.103  Sum_probs=61.0

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHC-CCeEEEEecCCCChhhHHHHHhhccCCCCeEEE-ECCCCChhHHHHHhccCCEEE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLR-GYTVHAALHNHGKLQCIEEELINYNEEKKLKVF-QADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~-~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      |+||+|+||||++|+.+++.|.+. +.++.++.++.+..+.+.+   .   .+++..+ ..++.+.+..  .++++|+||
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~---~---~~~~~~~~~~~~~~~~~~--~~~~vD~Vf   73 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSD---V---HPHLRGLVDLVLEPLDPE--ILAGADVVF   73 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHH---h---CcccccccCceeecCCHH--HhcCCCEEE
Confidence            589999999999999999999987 6888777664433333332   1   0112111 1233333322  456899998


Q ss_pred             ecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcc
Q 043792          104 YSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLT  150 (294)
Q Consensus       104 h~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~  150 (294)
                      -|.....                ...++..+.+. + +++|=.|+..
T Consensus        74 ~alP~~~----------------~~~~v~~a~~a-G-~~VID~S~~f  102 (343)
T PRK00436         74 LALPHGV----------------SMDLAPQLLEA-G-VKVIDLSADF  102 (343)
T ss_pred             ECCCcHH----------------HHHHHHHHHhC-C-CEEEECCccc
Confidence            8765311                33455555555 5 4788888753

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.91  E-value=0.00011  Score=61.72  Aligned_cols=113  Identities=13%  Similarity=0.061  Sum_probs=78.9

Q ss_pred             EEEeCCCchHHHHHHHHHHHCC----CeEEEEecCCCChhhHHHHHhhc-cCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           29 VCVMDASGHFASALVRRLLLRG----YTVHAALHNHGKLQCIEEELINY-NEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        29 vlItGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~l~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      |.|+||+|.+|..++..|+..|    .++..++++++..+....++... ......++..     ..++.+.++++|+||
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~-----~~d~~~~~~~aDiVv   75 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSI-----TDDPYEAFKDADVVI   75 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEE-----CCchHHHhCCCCEEE
Confidence            5789999999999999999998    78999998876655443322111 0000112221     123466788999999


Q ss_pred             ecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCc-EEEEec
Q 043792          104 YSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD-KVVFTS  147 (294)
Q Consensus       104 h~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~v~~S  147 (294)
                      -.++...............|+.....+.+.+.+. +.. .++..|
T Consensus        76 ~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~-~p~a~~i~~t  119 (263)
T cd00650          76 ITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKY-SPDAWIIVVS  119 (263)
T ss_pred             ECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEec
Confidence            9998877666666678889999999999999888 322 344443

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.90  E-value=4.1e-05  Score=69.55  Aligned_cols=73  Identities=12%  Similarity=0.144  Sum_probs=61.8

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHH-hccCCEEEec
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNA-LKGCSGLFYS  105 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~Vih~  105 (294)
                      |+|+|+|+ |.+|+++++.|.++|++|++++++++..+.+.+       ..+++++.+|.++...+.++ ++++|.||-+
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~-------~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~   72 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQD-------RLDVRTVVGNGSSPDVLREAGAEDADLLIAV   72 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh-------hcCEEEEEeCCCCHHHHHHcCCCcCCEEEEe
Confidence            58999998 999999999999999999999998776555443       12688999999999999888 7889999887


Q ss_pred             CC
Q 043792          106 FE  107 (294)
Q Consensus       106 a~  107 (294)
                      ..
T Consensus        73 ~~   74 (453)
T PRK09496         73 TD   74 (453)
T ss_pred             cC
Confidence            55

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=97.90  E-value=4.8e-05  Score=67.05  Aligned_cols=101  Identities=13%  Similarity=0.051  Sum_probs=71.3

Q ss_pred             CCCCeEEEeCC----------------CchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCC
Q 043792           24 NATKTVCVMDA----------------SGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPF   87 (294)
Q Consensus        24 ~~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~   87 (294)
                      .++++|+||||                ||.+|..++++|..+|++|+.+.+.....        .   ...+  ...|+.
T Consensus       183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~--------~---~~~~--~~~~v~  249 (390)
T TIGR00521       183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL--------T---PPGV--KSIKVS  249 (390)
T ss_pred             cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC--------C---CCCc--EEEEec
Confidence            56799999999                46799999999999999999988764321        0   0122  456888


Q ss_pred             ChhHH-HHHh----ccCCEEEecCCCCCCCCcch--------hhhHhHhhHHHHHHHHHHHhc
Q 043792           88 DYHSL-VNAL----KGCSGLFYSFEPPSDHSTYD--------ELTAEVETMAAHNVLEACAQT  137 (294)
Q Consensus        88 ~~~~~-~~~~----~~~d~Vih~a~~~~~~~~~~--------~~~~~~n~~~~~~ll~~~~~~  137 (294)
                      +.+++ ..++    .++|++|++|+.........        ...+..|+.-+-.+++.+++.
T Consensus       250 ~~~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~  312 (390)
T TIGR00521       250 TAEEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKI  312 (390)
T ss_pred             cHHHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhh
Confidence            88777 4444    35799999999865432111        123446777788888888765

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=97.90  E-value=0.00018  Score=61.61  Aligned_cols=116  Identities=13%  Similarity=0.084  Sum_probs=74.4

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEec
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYS  105 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~  105 (294)
                      |||.|+|+ |++|..++..|+.+|+ +|++++...+........  ...... .......+.-..++.+ ++++|.||-+
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d--~~~~~~-~~~~~~~i~~t~d~~~-~~~aDiVIit   76 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALD--MYEASP-VGGFDTKVTGTNNYAD-TANSDIVVIT   76 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHh--hhhhhh-ccCCCcEEEecCCHHH-hCCCCEEEEc
Confidence            68999997 9999999999999886 899999865543311110  110000 0000011111112333 5789999999


Q ss_pred             CCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCC-cEEEEecC
Q 043792          106 FEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTV-DKVVFTSS  148 (294)
Q Consensus       106 a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~-~~~v~~Ss  148 (294)
                      ++.+......+.+.+..|......+++.+.+. +. ..+|.+|-
T Consensus        77 ag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~-~p~~~iIv~tN  119 (305)
T TIGR01763        77 AGLPRKPGMSREDLLSMNAGIVREVTGRIMEH-SPNPIIVVVSN  119 (305)
T ss_pred             CCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecC
Confidence            99876554455578889999999999988877 32 24555443

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.89  E-value=7.3e-05  Score=58.90  Aligned_cols=77  Identities=16%  Similarity=0.139  Sum_probs=47.2

Q ss_pred             CCCeEEEeCC----------------CchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCC
Q 043792           25 ATKTVCVMDA----------------SGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFD   88 (294)
Q Consensus        25 ~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~   88 (294)
                      .+++||||+|                ||..|..|++++..+|++|+.+....+-.           ....++.+...-.+
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~-----------~p~~~~~i~v~sa~   70 (185)
T PF04127_consen    2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLP-----------PPPGVKVIRVESAE   70 (185)
T ss_dssp             TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS---------------TTEEEEE-SSHH
T ss_pred             CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcccc-----------ccccceEEEecchh
Confidence            3577777775                79999999999999999999988763210           01266666644222


Q ss_pred             h--hHHHHHhccCCEEEecCCCCCCC
Q 043792           89 Y--HSLVNALKGCSGLFYSFEPPSDH  112 (294)
Q Consensus        89 ~--~~~~~~~~~~d~Vih~a~~~~~~  112 (294)
                      +  +.+.+.+.++|++||+|+.....
T Consensus        71 em~~~~~~~~~~~Di~I~aAAVsDf~   96 (185)
T PF04127_consen   71 EMLEAVKELLPSADIIIMAAAVSDFR   96 (185)
T ss_dssp             HHHHHHHHHGGGGSEEEE-SB--SEE
T ss_pred             hhhhhhccccCcceeEEEecchhhee
Confidence            1  33444556789999999986643

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.86  E-value=0.00045  Score=55.50  Aligned_cols=105  Identities=12%  Similarity=0.131  Sum_probs=66.4

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCC-------------------ChhhHHHHHhhccCCCCeE--E
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHG-------------------KLQCIEEELINYNEEKKLK--V   81 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~-------------------~~~~l~~~~~~~~~~~~v~--~   81 (294)
                      ....+|+|.|+ |.+|+++++.|...|. ++++++++.-                   +.+.+.+.+  ...++.++  .
T Consensus        19 l~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l--~~~np~v~i~~   95 (202)
T TIGR02356        19 LLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRL--RELNSDIQVTA   95 (202)
T ss_pred             hcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHH--HHhCCCCEEEE
Confidence            35679999997 8899999999999995 7888887521                   111222211  11233333  3


Q ss_pred             EECCCCChhHHHHHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792           82 FQADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus        82 ~~~Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      +...+ +.+.+.++++++|+||.+....               ..-..+-+.|++. ++ .+|+.++.
T Consensus        96 ~~~~i-~~~~~~~~~~~~D~Vi~~~d~~---------------~~r~~l~~~~~~~-~i-p~i~~~~~  145 (202)
T TIGR02356        96 LKERV-TAENLELLINNVDLVLDCTDNF---------------ATRYLINDACVAL-GT-PLISAAVV  145 (202)
T ss_pred             ehhcC-CHHHHHHHHhCCCEEEECCCCH---------------HHHHHHHHHHHHc-CC-CEEEEEec
Confidence            44444 4456778889999999986421               1122355666777 65 57776654

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PLN02602 lactate dehydrogenase

Probab=97.86  E-value=0.00094  Score=58.14  Aligned_cols=113  Identities=13%  Similarity=0.081  Sum_probs=77.6

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCCChhhHHHHHhh-ccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELIN-YNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~~-~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      +||.|+|+ |.+|+.++-.|+.++  .++..++.+.+.......++.- .......++.. + .+   +. .++++|+||
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~-~-~d---y~-~~~daDiVV  110 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILA-S-TD---YA-VTAGSDLCI  110 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEe-C-CC---HH-HhCCCCEEE
Confidence            69999997 999999999999887  4688888877655433222111 11111222222 1 12   22 378999999


Q ss_pred             ecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCc-EEEEec
Q 043792          104 YSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD-KVVFTS  147 (294)
Q Consensus       104 h~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~v~~S  147 (294)
                      -+||.+......+.+.+..|+.....+.+.+.+. +.+ .+|.+|
T Consensus       111 itAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~-~p~~ivivvt  154 (350)
T PLN02602        111 VTAGARQIPGESRLNLLQRNVALFRKIIPELAKY-SPDTILLIVS  154 (350)
T ss_pred             ECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEec
Confidence            9999877666666789999999999999999888 433 455544

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.82  E-value=0.00018  Score=65.37  Aligned_cols=77  Identities=22%  Similarity=0.100  Sum_probs=55.6

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC-ChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG-KLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      .++++|+|+|+++ +|..+++.|+++|++|++.+++.. ..+....+  +  ...+++++.+|..+     +...++|+|
T Consensus         3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~--l--~~~~~~~~~~~~~~-----~~~~~~d~v   72 (450)
T PRK14106          3 LKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEE--L--GELGIELVLGEYPE-----EFLEGVDLV   72 (450)
T ss_pred             cCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHH--H--HhcCCEEEeCCcch-----hHhhcCCEE
Confidence            3468999999966 999999999999999999988652 22222221  1  11257788888765     235678999


Q ss_pred             EecCCCCC
Q 043792          103 FYSFEPPS  110 (294)
Q Consensus       103 ih~a~~~~  110 (294)
                      |++++...
T Consensus        73 v~~~g~~~   80 (450)
T PRK14106         73 VVSPGVPL   80 (450)
T ss_pred             EECCCCCC
Confidence            99988643

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.79  E-value=0.00064  Score=50.87  Aligned_cols=106  Identities=15%  Similarity=0.180  Sum_probs=68.0

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCC-------------------hhhHHHHHhhccCCCCeEEEECC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGK-------------------LQCIEEELINYNEEKKLKVFQAD   85 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-------------------~~~l~~~~~~~~~~~~v~~~~~D   85 (294)
                      .++|+|.|+ |.+|+.+++.|...|. ++++++.+.-.                   .+.+++.+......-+++.+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            478999998 9999999999999996 57777763211                   11222222112223355666667


Q ss_pred             CCChhHHHHHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcc
Q 043792           86 PFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLT  150 (294)
Q Consensus        86 l~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~  150 (294)
                      + +.+.+.++++++|+||.+...               ...-..+.+.|++. +. .+|+.++.+
T Consensus        81 ~-~~~~~~~~~~~~d~vi~~~d~---------------~~~~~~l~~~~~~~-~~-p~i~~~~~g  127 (135)
T PF00899_consen   81 I-DEENIEELLKDYDIVIDCVDS---------------LAARLLLNEICREY-GI-PFIDAGVNG  127 (135)
T ss_dssp             C-SHHHHHHHHHTSSEEEEESSS---------------HHHHHHHHHHHHHT-T--EEEEEEEET
T ss_pred             c-ccccccccccCCCEEEEecCC---------------HHHHHHHHHHHHHc-CC-CEEEEEeec
Confidence            6 556688888999999998653               22233466677777 64 677766543

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=97.78  E-value=0.00023  Score=58.36  Aligned_cols=115  Identities=16%  Similarity=0.061  Sum_probs=78.5

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEE---ecCCC--ChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAA---LHNHG--KLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~---~r~~~--~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~   97 (294)
                      ..++-||.|.||.|.||+.|.-.|. ....|.-+   +-...  -...+.+   .     +-+.....++-.+++.++++
T Consensus        25 ~~~~~KVAvlGAaGGIGQPLSLLlK-~np~Vs~LaLYDi~~~~GVaaDlSH---I-----~T~s~V~g~~g~~~L~~al~   95 (345)
T KOG1494|consen   25 SQRGLKVAVLGAAGGIGQPLSLLLK-LNPLVSELALYDIANTPGVAADLSH---I-----NTNSSVVGFTGADGLENALK   95 (345)
T ss_pred             ccCcceEEEEecCCccCccHHHHHh-cCcccceeeeeecccCCcccccccc---c-----CCCCceeccCChhHHHHHhc
Confidence            4567899999999999999976664 44444332   22211  1111111   1     11111223344568999999


Q ss_pred             cCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCc-EEEEec
Q 043792           98 GCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD-KVVFTS  147 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~v~~S  147 (294)
                      ++|+|+-=||.+......+++.|++|......|..++.+. .-. ++.++|
T Consensus        96 ~advVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~-cP~A~i~vIs  145 (345)
T KOG1494|consen   96 GADVVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKC-CPNALILVIS  145 (345)
T ss_pred             CCCEEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhh-CccceeEeec
Confidence            9999999999999888888899999999999999998888 433 344444

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.76  E-value=0.00036  Score=63.38  Aligned_cols=77  Identities=17%  Similarity=0.229  Sum_probs=62.5

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHH-hccCCEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNA-LKGCSGL  102 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~V  102 (294)
                      ..+++|+|.|+ |.+|+.+++.|.+.|++|++++++++..+.+.+   .   ..++.++.+|.++.+.+.++ ++++|.|
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~---~---~~~~~~i~gd~~~~~~L~~~~~~~a~~v  301 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAE---E---LPNTLVLHGDGTDQELLEEEGIDEADAF  301 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH---H---CCCCeEEECCCCCHHHHHhcCCccCCEE
Confidence            34689999998 999999999999999999999998876665554   1   23678999999999988654 5678999


Q ss_pred             EecCC
Q 043792          103 FYSFE  107 (294)
Q Consensus       103 ih~a~  107 (294)
                      |-+..
T Consensus       302 i~~~~  306 (453)
T PRK09496        302 IALTN  306 (453)
T ss_pred             EECCC
Confidence            86554

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=97.73  E-value=0.00036  Score=61.24  Aligned_cols=174  Identities=13%  Similarity=0.056  Sum_probs=102.0

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCC-----eEEE--E--ecCCCChhhHHHHHhhc--cCCCCeEEEECCCCChhHHHH
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGY-----TVHA--A--LHNHGKLQCIEEELINY--NEEKKLKVFQADPFDYHSLVN   94 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~-----~V~~--~--~r~~~~~~~l~~~~~~~--~~~~~v~~~~~Dl~~~~~~~~   94 (294)
                      .-||.|+|++|.+|++++-.|+..+.     +|.+  +  +++.+..+....++.-.  ....++.+...   +    .+
T Consensus        44 p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~---~----y~  116 (387)
T TIGR01757        44 TVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGID---P----YE  116 (387)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEecC---C----HH
Confidence            47999999999999999999998762     2333  3  55655554332221000  00112222221   2    24


Q ss_pred             HhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCC-cEEEEecCcceeeeCCCCCCCCCCCCCCCCCCC
Q 043792           95 ALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTV-DKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSD  173 (294)
Q Consensus        95 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~-~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~  173 (294)
                      .++++|+||-.||.+......+.+.++.|+...+.+.+.+.+..+. .++|.+|-..   .- ..    . .+.+.....
T Consensus       117 ~~kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsNPv---Dv-~t----~-v~~k~sg~~  187 (387)
T TIGR01757       117 VFEDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGNPC---NT-NA----L-IAMKNAPNI  187 (387)
T ss_pred             HhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCcH---HH-HH----H-HHHHHcCCC
Confidence            5789999999999887766677799999999999999999885222 2455555321   00 00    0 000000000


Q ss_pred             hhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCC
Q 043792          174 VNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVT  220 (294)
Q Consensus       174 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~  220 (294)
                      +.     +..=..+.+..-++-...+++.+++...++-+.|+|.+..
T Consensus       188 ~~-----rviG~gT~LDsaR~r~~LA~~l~v~~~~V~~~~V~GeHGd  229 (387)
T TIGR01757       188 PR-----KNFHALTRLDENRAKCQLALKSGKFYTSVSNVTIWGNHST  229 (387)
T ss_pred             cc-----cEEEecchhHHHHHHHHHHHHHCcChhHcceeEEEecCCC
Confidence            00     0112334444455555566667777777777778888743

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.73  E-value=0.00011  Score=63.49  Aligned_cols=95  Identities=16%  Similarity=0.146  Sum_probs=55.4

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEE--EecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHA--ALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~--~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      +|++|.|+||||++|..|++.|.++++.+.-  ..++.+...+...   +    .+.   ..++.+.+.. + ++++|.|
T Consensus         3 ~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~---~----~~~---~l~~~~~~~~-~-~~~vD~v   70 (336)
T PRK05671          3 QPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVP---F----AGK---NLRVREVDSF-D-FSQVQLA   70 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeec---c----CCc---ceEEeeCChH-H-hcCCCEE
Confidence            3479999999999999999999987654333  2233322211111   1    111   2233222222 1 4789999


Q ss_pred             EecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792          103 FYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus       103 ih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      |-+... .               ....++..+.+. ++ ++|=.|+.
T Consensus        71 Fla~p~-~---------------~s~~~v~~~~~~-G~-~VIDlS~~   99 (336)
T PRK05671         71 FFAAGA-A---------------VSRSFAEKARAA-GC-SVIDLSGA   99 (336)
T ss_pred             EEcCCH-H---------------HHHHHHHHHHHC-CC-eEEECchh
Confidence            987752 1               123366666666 65 57777775

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=97.72  E-value=0.00051  Score=58.79  Aligned_cols=111  Identities=12%  Similarity=0.059  Sum_probs=77.4

Q ss_pred             EEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCCChhhHHHHHhhc-cCCCCeEEEECCCCChhHHHHHhccCCEEEec
Q 043792           29 VCVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELINY-NEEKKLKVFQADPFDYHSLVNALKGCSGLFYS  105 (294)
Q Consensus        29 vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~  105 (294)
                      |.|+|+ |.+|+.++-.|+..|  .++.+++++.+.......++.-. ......++...  .|    .+.++++|+||.+
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~----~~~l~~aDiVIit   73 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GD----YADAADADIVVIT   73 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CC----HHHhCCCCEEEEc
Confidence            468897 889999999999988  78999999877655443322111 11112222221  12    2367899999999


Q ss_pred             CCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCc-EEEEec
Q 043792          106 FEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD-KVVFTS  147 (294)
Q Consensus       106 a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~v~~S  147 (294)
                      ++.+.....++.+.+..|+.....+.+.+++. +.+ .++.+|
T Consensus        74 ag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~-~p~~~viv~s  115 (300)
T cd00300          74 AGAPRKPGETRLDLINRNAPILRSVITNLKKY-GPDAIILVVS  115 (300)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEcc
Confidence            99877666666788999999999999999888 432 454444

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.71  E-value=9.4e-05  Score=63.62  Aligned_cols=39  Identities=15%  Similarity=0.106  Sum_probs=34.0

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhh
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQC   65 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~   65 (294)
                      +|+|.|+|+ |.+|+.++..|+++|++|++++|+++..+.
T Consensus         2 ~~~V~VIG~-G~mG~~iA~~la~~G~~V~v~d~~~~~~~~   40 (308)
T PRK06129          2 MGSVAIIGA-GLIGRAWAIVFARAGHEVRLWDADPAAAAA   40 (308)
T ss_pred             CcEEEEECc-cHHHHHHHHHHHHCCCeeEEEeCCHHHHHH
Confidence            368999995 999999999999999999999998765443

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=97.71  E-value=0.00056  Score=56.52  Aligned_cols=96  Identities=16%  Similarity=0.126  Sum_probs=73.7

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCCEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCSGL  102 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~V  102 (294)
                      +|++|||.|||+= |+.|++.|.+.|++|++..-.....  .        ....+.+..+-+.+.+.+.++++  +++.|
T Consensus         1 ~~~~IlvlgGT~e-gr~la~~L~~~g~~v~~Svat~~g~--~--------~~~~~~v~~G~l~~~~~l~~~l~~~~i~~V   69 (248)
T PRK08057          1 MMPRILLLGGTSE-ARALARALAAAGVDIVLSLAGRTGG--P--------ADLPGPVRVGGFGGAEGLAAYLREEGIDLV   69 (248)
T ss_pred             CCceEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCCC--c--------ccCCceEEECCCCCHHHHHHHHHHCCCCEE
Confidence            3678999999887 9999999999999888765543221  1        12367888899889999999997  68999


Q ss_pred             EecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEE
Q 043792          103 FYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVF  145 (294)
Q Consensus       103 ih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~  145 (294)
                      |+..-|..             ...+.++.++|.+. +++.+=|
T Consensus        70 IDATHPfA-------------~~is~~a~~ac~~~-~ipyiR~   98 (248)
T PRK08057         70 IDATHPYA-------------AQISANAAAACRAL-GIPYLRL   98 (248)
T ss_pred             EECCCccH-------------HHHHHHHHHHHHHh-CCcEEEE
Confidence            99977654             34577888999988 8764433

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=97.70  E-value=0.00017  Score=69.75  Aligned_cols=164  Identities=15%  Similarity=0.108  Sum_probs=110.5

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEE-ecCCCCh--hhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc----
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAA-LHNHGKL--QCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG----   98 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~--~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~----   98 (294)
                      .+.++|+||-|..|..|+..|.++|.+-.++ +|+--+.  +.+.-.+ ....+-.|.+-..|++..+.-..+++.    
T Consensus      1768 eksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrr-Wr~~GVqV~vsT~nitt~~ga~~Li~~s~kl 1846 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRR-WRRRGVQVQVSTSNITTAEGARGLIEESNKL 1846 (2376)
T ss_pred             cceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHH-HHhcCeEEEEecccchhhhhHHHHHHHhhhc
Confidence            4789999999999999999999999765555 5654332  1111101 112223344556778777766666653    


Q ss_pred             --CCEEEecCCCCCCC------CcchhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCCCCC
Q 043792           99 --CSGLFYSFEPPSDH------STYDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDER  169 (294)
Q Consensus        99 --~d~Vih~a~~~~~~------~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~  169 (294)
                        +-.|||+|......      ..+.++..+.-+.+|.||=+..++. .-.+.||..||.+ ++-|+.+    +      
T Consensus      1847 ~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvs-cGRGN~G----Q------ 1915 (2376)
T KOG1202|consen 1847 GPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVS-CGRGNAG----Q------ 1915 (2376)
T ss_pred             ccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeec-ccCCCCc----c------
Confidence              57889997764322      1122245556677888887777666 4467899999976 5666555    4      


Q ss_pred             CCCChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCce
Q 043792          170 NWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLV  214 (294)
Q Consensus       170 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i  214 (294)
                                  +.||.+-.+.|+++++-. .+|++-+.+.-|.|
T Consensus      1916 ------------tNYG~aNS~MERiceqRr-~~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1916 ------------TNYGLANSAMERICEQRR-HEGFPGTAIQWGAI 1947 (2376)
T ss_pred             ------------cccchhhHHHHHHHHHhh-hcCCCcceeeeecc
Confidence                        789999999999998744 35888777766654

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.69  E-value=0.00022  Score=62.26  Aligned_cols=99  Identities=14%  Similarity=0.061  Sum_probs=59.6

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHC-CCeEEEE-ecCCCChhhHHHHHhhccCCCCeEEE-ECCCCChhHHHHHhccCCEEE
Q 043792           27 KTVCVMDASGHFASALVRRLLLR-GYTVHAA-LHNHGKLQCIEEELINYNEEKKLKVF-QADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~l~~~~~~~~~~~~v~~~-~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      +||.|+||||++|..+++.|.+. +.++..+ +++.+..+.+..   ..   +.+... ..++.+ .+..++++++|+||
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~---~~---~~l~~~~~~~~~~-~~~~~~~~~~DvVf   73 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSE---VH---PHLRGLVDLNLEP-IDEEEIAEDADVVF   73 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHH---hC---ccccccCCceeec-CCHHHhhcCCCEEE
Confidence            58999999999999999999987 5777754 544333222332   11   111111 111221 12233445899999


Q ss_pred             ecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcc
Q 043792          104 YSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLT  150 (294)
Q Consensus       104 h~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~  150 (294)
                      -|....                ....++..+.+. + .++|=+|+..
T Consensus        74 ~alP~~----------------~s~~~~~~~~~~-G-~~VIDlS~~f  102 (346)
T TIGR01850        74 LALPHG----------------VSAELAPELLAA-G-VKVIDLSADF  102 (346)
T ss_pred             ECCCch----------------HHHHHHHHHHhC-C-CEEEeCChhh
Confidence            887632                234566665556 6 5888888864

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PRK04148 hypothetical protein; Provisional

Probab=97.69  E-value=0.00045  Score=51.04  Aligned_cols=93  Identities=17%  Similarity=0.239  Sum_probs=69.4

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      ++++|++.|. | -|.+++..|.+.|++|++++.++...+...+   .     .+.++.+|+.++.  -+.-+++|.|+-
T Consensus        16 ~~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~---~-----~~~~v~dDlf~p~--~~~y~~a~liys   83 (134)
T PRK04148         16 KNKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEKAKK---L-----GLNAFVDDLFNPN--LEIYKNAKLIYS   83 (134)
T ss_pred             cCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH---h-----CCeEEECcCCCCC--HHHHhcCCEEEE
Confidence            3578999997 6 6999999999999999999999887666655   2     6889999998875  123457787776


Q ss_pred             cCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEE
Q 043792          105 SFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVF  145 (294)
Q Consensus       105 ~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~  145 (294)
                      +=-+..               ....+++.+++. ++.-+|.
T Consensus        84 irpp~e---------------l~~~~~~la~~~-~~~~~i~  108 (134)
T PRK04148         84 IRPPRD---------------LQPFILELAKKI-NVPLIIK  108 (134)
T ss_pred             eCCCHH---------------HHHHHHHHHHHc-CCCEEEE
Confidence            644432               245678888888 7765543

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.64  E-value=0.00019  Score=55.00  Aligned_cols=76  Identities=17%  Similarity=0.084  Sum_probs=53.3

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      .+.++|+|+|+ |.+|+.+++.|.+.| ++|++++|+.++.+.+.+++       ....+..+..+   ..+.++++|+|
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~-------~~~~~~~~~~~---~~~~~~~~Dvv   85 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERF-------GELGIAIAYLD---LEELLAEADLI   85 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHH-------hhcccceeecc---hhhccccCCEE
Confidence            34689999998 999999999999996 88999999877665554421       11111123333   33447889999


Q ss_pred             EecCCCCC
Q 043792          103 FYSFEPPS  110 (294)
Q Consensus       103 ih~a~~~~  110 (294)
                      |.+.....
T Consensus        86 i~~~~~~~   93 (155)
T cd01065          86 INTTPVGM   93 (155)
T ss_pred             EeCcCCCC
Confidence            99977654

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.60  E-value=0.00059  Score=57.28  Aligned_cols=101  Identities=16%  Similarity=0.105  Sum_probs=70.4

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      ++++|.|+|+.| +|+--++...+.|++|++++++.++.+.....  +     +.+.+..-..|++.++++.+-.|.++|
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~--L-----GAd~fv~~~~d~d~~~~~~~~~dg~~~  252 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKS--L-----GADVFVDSTEDPDIMKAIMKTTDGGID  252 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHh--c-----CcceeEEecCCHHHHHHHHHhhcCcce
Confidence            689999999988 99999999999999999999988555444331  2     556655555588888888776677777


Q ss_pred             cCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792          105 SFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus       105 ~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      ++......             ....+++.++..   .++|+++-.
T Consensus       253 ~v~~~a~~-------------~~~~~~~~lk~~---Gt~V~vg~p  281 (360)
T KOG0023|consen  253 TVSNLAEH-------------ALEPLLGLLKVN---GTLVLVGLP  281 (360)
T ss_pred             eeeecccc-------------chHHHHHHhhcC---CEEEEEeCc
Confidence            76532110             012355555555   478887743

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.59  E-value=0.00033  Score=61.31  Aligned_cols=37  Identities=19%  Similarity=0.230  Sum_probs=30.8

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCC
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHG   61 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~   61 (294)
                      +++||+|+||||++|+.|++.|.+.. .++.++.++.+
T Consensus         2 ~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~   39 (349)
T PRK08664          2 MKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASER   39 (349)
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChh
Confidence            35899999999999999999999875 48888756543

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.58  E-value=0.0021  Score=52.79  Aligned_cols=107  Identities=16%  Similarity=0.159  Sum_probs=65.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCC-------------------ChhhHHHHHhhccCCCCeEEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHG-------------------KLQCIEEELINYNEEKKLKVFQ   83 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~-------------------~~~~l~~~~~~~~~~~~v~~~~   83 (294)
                      .+..+|+|.|+ |.+|+++++.|...|. ++++++.+.-                   +.+.+.+.++.....-+++.+.
T Consensus        19 L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~   97 (228)
T cd00757          19 LKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYN   97 (228)
T ss_pred             HhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEec
Confidence            34679999997 8999999999999995 5666554311                   1112222211111122455555


Q ss_pred             CCCCChhHHHHHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792           84 ADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus        84 ~Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      .++ +.+.+.++++++|+||.+.....               .-..+-+.|.+. ++ .+|+.+..
T Consensus        98 ~~i-~~~~~~~~~~~~DvVi~~~d~~~---------------~r~~l~~~~~~~-~i-p~i~~g~~  145 (228)
T cd00757          98 ERL-DAENAEELIAGYDLVLDCTDNFA---------------TRYLINDACVKL-GK-PLVSGAVL  145 (228)
T ss_pred             cee-CHHHHHHHHhCCCEEEEcCCCHH---------------HHHHHHHHHHHc-CC-CEEEEEec
Confidence            555 45667788889999999876321               123455667777 65 56676554

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=97.58  E-value=0.0011  Score=56.99  Aligned_cols=96  Identities=18%  Similarity=0.148  Sum_probs=68.1

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      .++++|+|+|+ |.+|...++.+...|.+|++++|++++.+..++   +     +.+.+...- |++.++..-+.+|.+|
T Consensus       165 ~pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~---l-----GAd~~i~~~-~~~~~~~~~~~~d~ii  234 (339)
T COG1064         165 KPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAKK---L-----GADHVINSS-DSDALEAVKEIADAII  234 (339)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH---h-----CCcEEEEcC-CchhhHHhHhhCcEEE
Confidence            45789999999 589999999999999999999999988776665   3     444333322 5554544444589999


Q ss_pred             ecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecC
Q 043792          104 YSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSS  148 (294)
Q Consensus       104 h~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss  148 (294)
                      .+++ ...               ....++.++.. |  +++.++-
T Consensus       235 ~tv~-~~~---------------~~~~l~~l~~~-G--~~v~vG~  260 (339)
T COG1064         235 DTVG-PAT---------------LEPSLKALRRG-G--TLVLVGL  260 (339)
T ss_pred             ECCC-hhh---------------HHHHHHHHhcC-C--EEEEECC
Confidence            9998 321               23455666655 4  7887653

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=97.58  E-value=0.00039  Score=64.84  Aligned_cols=73  Identities=14%  Similarity=0.195  Sum_probs=61.2

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHH-hccCCEEEe
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNA-LKGCSGLFY  104 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~Vih  104 (294)
                      .-+|+|.|+ |-+|+++++.|.++|++|++++.++++.+.+++        .+...+.+|.+|++.++++ ++++|.|+-
T Consensus       417 ~~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~--------~g~~~i~GD~~~~~~L~~a~i~~a~~viv  487 (558)
T PRK10669        417 CNHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE--------RGIRAVLGNAANEEIMQLAHLDCARWLLL  487 (558)
T ss_pred             CCCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH--------CCCeEEEcCCCCHHHHHhcCccccCEEEE
Confidence            358999997 999999999999999999999998877666655        3789999999999988765 467888776


Q ss_pred             cCC
Q 043792          105 SFE  107 (294)
Q Consensus       105 ~a~  107 (294)
                      +..
T Consensus       488 ~~~  490 (558)
T PRK10669        488 TIP  490 (558)
T ss_pred             EcC
Confidence            655

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=97.55  E-value=4.5e-05  Score=60.32  Aligned_cols=83  Identities=18%  Similarity=0.201  Sum_probs=44.0

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeE-----EE-ECCCCChhHHHHHhccCC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLK-----VF-QADPFDYHSLVNALKGCS  100 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~-----~~-~~Dl~~~~~~~~~~~~~d  100 (294)
                      |||.|.|. ||+|..++..|++.|++|++++.++++.+.+.+.... -..+++.     .. .+.+.-..++.++++++|
T Consensus         1 M~I~ViGl-GyvGl~~A~~lA~~G~~V~g~D~~~~~v~~l~~g~~p-~~E~~l~~ll~~~~~~~~l~~t~~~~~ai~~ad   78 (185)
T PF03721_consen    1 MKIAVIGL-GYVGLPLAAALAEKGHQVIGVDIDEEKVEALNNGELP-IYEPGLDELLKENVSAGRLRATTDIEEAIKDAD   78 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HHHHHHHHTTSSS-S-CTTHHHHHHHHHHTTSEEEESEHHHHHHH-S
T ss_pred             CEEEEECC-CcchHHHHHHHHhCCCEEEEEeCChHHHHHHhhcccc-ccccchhhhhccccccccchhhhhhhhhhhccc
Confidence            78999985 9999999999999999999999987766555431000 0000000     00 001111123444556789


Q ss_pred             EEEecCCCCCC
Q 043792          101 GLFYSFEPPSD  111 (294)
Q Consensus       101 ~Vih~a~~~~~  111 (294)
                      ++|-|...+..
T Consensus        79 v~~I~VpTP~~   89 (185)
T PF03721_consen   79 VVFICVPTPSD   89 (185)
T ss_dssp             EEEE----EBE
T ss_pred             eEEEecCCCcc
Confidence            99999876543

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>KOG1496 consensus Malate dehydrogenase [Energy production and conversion]

Probab=97.54  E-value=0.0007  Score=54.37  Aligned_cols=177  Identities=12%  Similarity=0.062  Sum_probs=102.3

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHC---C--CeEEEEecCCCChhhHHHHHhhccCCCCe-EEE-ECCCCChhHHHHHhcc
Q 043792           26 TKTVCVMDASGHFASALVRRLLLR---G--YTVHAALHNHGKLQCIEEELINYNEEKKL-KVF-QADPFDYHSLVNALKG   98 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~---g--~~V~~~~r~~~~~~~l~~~~~~~~~~~~v-~~~-~~Dl~~~~~~~~~~~~   98 (294)
                      .-+|+||||.|.||.+|+-.+..-   |  ..++..--+..+.....+..... ..+.. ... ..+.+  .+-..+|++
T Consensus         4 pirVlVtGAAGqI~ysll~~ia~G~vfG~dQPiiL~lLdi~~~~~~LegV~mE-LqD~a~PlL~~Vvat--td~~~afkd   80 (332)
T KOG1496|consen    4 PIRVLVTGAAGQIGYSLLPMIARGIVFGKDQPIILHLLDIPPMMSVLEGVKME-LQDCALPLLKGVVAT--TDEVEAFKD   80 (332)
T ss_pred             ceEEEeecccchhhHHHHHHHcCceeecCCCceEEEeeCCchHHHHHHHHHHH-HHhhhhhHHHhhhcc--cChhhhhcc
Confidence            358999999999999999988652   2  11222222222221111100000 00000 000 01111  123456789


Q ss_pred             CCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhh
Q 043792           99 CSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNL  176 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~  176 (294)
                      +|+.|-..+.+......+.+.+..|+...+.--.++.+.  +++| ++.++-.+      ..   +-.-..+..|.-|..
T Consensus        81 v~~ailvGa~PR~eGMERkDll~~NvkIfk~Qg~AL~k~A~~~~K-VlVVgNPa------NT---Nali~~k~ApsIP~k  150 (332)
T KOG1496|consen   81 VDVAILVGAMPRREGMERKDLLSANVKIFKSQGAALEKYAKPNVK-VLVVGNPA------NT---NALILKKFAPSIPEK  150 (332)
T ss_pred             CcEEEEeccccCcccchhhhHHhhcceeehhhhHHHHHhcCCCce-EEEecCcc------cc---chhHHhhhCCCCchh
Confidence            999999988888777766788888987665555555544  3564 44433221      11   011223333333332


Q ss_pred             hhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCC
Q 043792          177 CKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVT  220 (294)
Q Consensus       177 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~  220 (294)
                           +.-+.+++...+.+-+.+.+.|+++.-+.--.|+|.+..
T Consensus       151 -----Nfs~lTRLDhNRA~~QlA~klgv~~~~VkNviIWGNHSs  189 (332)
T KOG1496|consen  151 -----NFSALTRLDHNRALAQLALKLGVPVSDVKNVIIWGNHSS  189 (332)
T ss_pred             -----cchhhhhhchhhHHHHHHHhhCCchhhcceeEEeccccc
Confidence                 567778888888888888888999998888889998843

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=97.52  E-value=0.0022  Score=51.37  Aligned_cols=108  Identities=15%  Similarity=0.219  Sum_probs=65.5

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCCh---------------------hhHHHHHhhccCCCCeEEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKL---------------------QCIEEELINYNEEKKLKVF   82 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~---------------------~~l~~~~~~~~~~~~v~~~   82 (294)
                      +..+|+|.|++| +|+++++.|...|. ++++++.+.-..                     +...+.++.....-+++.+
T Consensus        18 ~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~~   96 (198)
T cd01485          18 RSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSIV   96 (198)
T ss_pred             hhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEEE
Confidence            457999999855 99999999999994 477776542111                     1111111111222234455


Q ss_pred             ECCCCC-hhHHHHHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcc
Q 043792           83 QADPFD-YHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLT  150 (294)
Q Consensus        83 ~~Dl~~-~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~  150 (294)
                      ..++.+ .+...++++++|+||.+-..               ......+-+.|++. ++ .+|+.++.+
T Consensus        97 ~~~~~~~~~~~~~~~~~~dvVi~~~d~---------------~~~~~~ln~~c~~~-~i-p~i~~~~~G  148 (198)
T cd01485          97 EEDSLSNDSNIEEYLQKFTLVIATEEN---------------YERTAKVNDVCRKH-HI-PFISCATYG  148 (198)
T ss_pred             ecccccchhhHHHHHhCCCEEEECCCC---------------HHHHHHHHHHHHHc-CC-CEEEEEeec
Confidence            555542 44566778899999977442               12223355777777 75 588877765

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.52  E-value=0.00034  Score=60.83  Aligned_cols=68  Identities=12%  Similarity=0.176  Sum_probs=45.4

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCCCeEE---EEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           28 TVCVMDASGHFASALVRRLLLRGYTVH---AALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g~~V~---~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      +|+|.||||++|+.|++.|.+++|.+.   .+.+..+..+.+..        .+.+....|+. .    ..++++|+||-
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~~--------~~~~~~~~~~~-~----~~~~~~D~v~~   67 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVTF--------KGKELEVNEAK-I----ESFEGIDIALF   67 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeeee--------CCeeEEEEeCC-h----HHhcCCCEEEE
Confidence            589999999999999999999887754   33354433222211        12445555653 1    23478999999


Q ss_pred             cCCC
Q 043792          105 SFEP  108 (294)
Q Consensus       105 ~a~~  108 (294)
                      +.+.
T Consensus        68 a~g~   71 (339)
T TIGR01296        68 SAGG   71 (339)
T ss_pred             CCCH
Confidence            9874

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.49  E-value=0.00049  Score=50.67  Aligned_cols=89  Identities=18%  Similarity=0.123  Sum_probs=54.9

Q ss_pred             CeEEEeCCCchHHHHHHHHHHH-CCCeEEEE-ecCCCCh--hhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           27 KTVCVMDASGHFASALVRRLLL-RGYTVHAA-LHNHGKL--QCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~-~g~~V~~~-~r~~~~~--~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      |||.|.|++|.+|+.+++.+.+ .++++.+. +|+++..  +.+.+   +....      ...+.-..++.++++.+|+|
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~---~~~~~------~~~~~v~~~l~~~~~~~DVv   71 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGE---LAGIG------PLGVPVTDDLEELLEEADVV   71 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHH---HCTSS------T-SSBEBS-HHHHTTH-SEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhh---hhCcC------CcccccchhHHHhcccCCEE
Confidence            5899999999999999999999 68887666 4554221  11111   10000      11111225678888889999


Q ss_pred             EecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCc
Q 043792          103 FYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD  141 (294)
Q Consensus       103 ih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~  141 (294)
                      |++..+                ..+...++.+.++ +++
T Consensus        72 IDfT~p----------------~~~~~~~~~~~~~-g~~   93 (124)
T PF01113_consen   72 IDFTNP----------------DAVYDNLEYALKH-GVP   93 (124)
T ss_dssp             EEES-H----------------HHHHHHHHHHHHH-T-E
T ss_pred             EEcCCh----------------HHhHHHHHHHHhC-CCC
Confidence            998742                3355677777777 653

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.49  E-value=0.0028  Score=56.08  Aligned_cols=107  Identities=15%  Similarity=0.176  Sum_probs=66.8

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecC-------------------CCChhhHHHHHhhccCCCCeEEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHN-------------------HGKLQCIEEELINYNEEKKLKVFQ   83 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~-------------------~~~~~~l~~~~~~~~~~~~v~~~~   83 (294)
                      .+.++|+|.|+ |.+|+++++.|...|. ++++++++                   ..+.+.+.+.++.....-+++.+.
T Consensus       133 l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~  211 (376)
T PRK08762        133 LLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQ  211 (376)
T ss_pred             HhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            34678999987 8899999999999996 67877775                   222333333221111112334444


Q ss_pred             CCCCChhHHHHHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792           84 ADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus        84 ~Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      ..+ +.+.+.++++++|+||++.....               .-..+-++|.+. ++ .+|+.+..
T Consensus       212 ~~~-~~~~~~~~~~~~D~Vv~~~d~~~---------------~r~~ln~~~~~~-~i-p~i~~~~~  259 (376)
T PRK08762        212 ERV-TSDNVEALLQDVDVVVDGADNFP---------------TRYLLNDACVKL-GK-PLVYGAVF  259 (376)
T ss_pred             ccC-ChHHHHHHHhCCCEEEECCCCHH---------------HHHHHHHHHHHc-CC-CEEEEEec
Confidence            444 34567778889999999976321               112355667777 65 57776543

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=97.48  E-value=0.00016  Score=56.12  Aligned_cols=67  Identities=21%  Similarity=0.257  Sum_probs=50.0

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEec
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYS  105 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~  105 (294)
                      ||+|.++|- |-.|+.+++.|++.|++|++.+|++++.+.+.+   .     ++..  .     ++..++++++|+||-+
T Consensus         1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~---~-----g~~~--~-----~s~~e~~~~~dvvi~~   64 (163)
T PF03446_consen    1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAE---A-----GAEV--A-----DSPAEAAEQADVVILC   64 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHH---T-----TEEE--E-----SSHHHHHHHBSEEEE-
T ss_pred             CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHH---h-----hhhh--h-----hhhhhHhhcccceEee
Confidence            689999997 999999999999999999999999877777665   2     2221  1     2456677788999988


Q ss_pred             CCC
Q 043792          106 FEP  108 (294)
Q Consensus       106 a~~  108 (294)
                      ...
T Consensus        65 v~~   67 (163)
T PF03446_consen   65 VPD   67 (163)
T ss_dssp             SSS
T ss_pred             ccc
Confidence            663

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=97.46  E-value=0.0018  Score=53.61  Aligned_cols=95  Identities=20%  Similarity=0.222  Sum_probs=69.8

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCCEEEe
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCSGLFY  104 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~Vih  104 (294)
                      |+|||.|||+= |+.|++.|.++|+ |.+.+-..-.. .+.     ......+.+..+-+.+.+.+.++++  +++.||+
T Consensus         1 m~ILvlgGTtE-~r~la~~L~~~g~-v~~sv~t~~g~-~~~-----~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vID   72 (249)
T PF02571_consen    1 MKILVLGGTTE-GRKLAERLAEAGY-VIVSVATSYGG-ELL-----KPELPGLEVRVGRLGDEEGLAEFLRENGIDAVID   72 (249)
T ss_pred             CEEEEEechHH-HHHHHHHHHhcCC-EEEEEEhhhhH-hhh-----ccccCCceEEECCCCCHHHHHHHHHhCCCcEEEE
Confidence            79999999887 9999999999998 55443322111 111     1122467888999989999999996  6899999


Q ss_pred             cCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEE
Q 043792          105 SFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKV  143 (294)
Q Consensus       105 ~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~  143 (294)
                      ..-|..             ...+.|+.++|++. +++-+
T Consensus        73 ATHPfA-------------~~is~na~~a~~~~-~ipyl   97 (249)
T PF02571_consen   73 ATHPFA-------------AEISQNAIEACREL-GIPYL   97 (249)
T ss_pred             CCCchH-------------HHHHHHHHHHHhhc-CcceE
Confidence            977644             34577889999888 77544

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.46  E-value=0.00039  Score=58.88  Aligned_cols=74  Identities=16%  Similarity=0.129  Sum_probs=52.9

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ..+++++|+|+ |.+|+.++..|.+.| .+|++++|+.++.+.+.+.+.   ....+.+   ++    +..+.+.++|+|
T Consensus       121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~---~~~~~~~---~~----~~~~~~~~~Div  189 (278)
T PRK00258        121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG---ALGKAEL---DL----ELQEELADFDLI  189 (278)
T ss_pred             CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh---hccceee---cc----cchhccccCCEE
Confidence            45689999997 999999999999999 799999999877777665321   1011121   11    223456788999


Q ss_pred             EecCCC
Q 043792          103 FYSFEP  108 (294)
Q Consensus       103 ih~a~~  108 (294)
                      |++...
T Consensus       190 InaTp~  195 (278)
T PRK00258        190 INATSA  195 (278)
T ss_pred             EECCcC
Confidence            999543

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=97.45  E-value=0.001  Score=56.97  Aligned_cols=111  Identities=14%  Similarity=0.117  Sum_probs=71.9

Q ss_pred             EEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhhc--cCCCCeEEEECCCCChhHHHHHhccCCEEEec
Q 043792           29 VCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINY--NEEKKLKVFQADPFDYHSLVNALKGCSGLFYS  105 (294)
Q Consensus        29 vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~--~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~  105 (294)
                      |.|+|+ |.+|+.++..|+.+|. +|+.++++++.......++...  ......++...  .|   + +.++++|+||.+
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~~t--~d---~-~~l~dADiVIit   73 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKVTGT--ND---Y-EDIAGSDVVVIT   73 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEEEc--CC---H-HHhCCCCEEEEe
Confidence            568998 9999999999998876 9999999876443211111000  00111222211  12   2 247899999999


Q ss_pred             CCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCc-EEEEec
Q 043792          106 FEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD-KVVFTS  147 (294)
Q Consensus       106 a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~v~~S  147 (294)
                      ++.+........+.+..|+.....+++.+.+. ..+ .+|.+|
T Consensus        74 ~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~-~p~~~iIv~s  115 (300)
T cd01339          74 AGIPRKPGMSRDDLLGTNAKIVKEVAENIKKY-APNAIVIVVT  115 (300)
T ss_pred             cCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEec
Confidence            98876655555567778998888999888877 433 344444

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=97.44  E-value=0.0031  Score=49.36  Aligned_cols=78  Identities=18%  Similarity=0.236  Sum_probs=50.4

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCC---C---------------ChhhHHHHHhhccCCCCeEEEECCCCC
Q 043792           28 TVCVMDASGHFASALVRRLLLRGY-TVHAALHNH---G---------------KLQCIEEELINYNEEKKLKVFQADPFD   88 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~---~---------------~~~~l~~~~~~~~~~~~v~~~~~Dl~~   88 (294)
                      +|+|.|+ |.+|+.+++.|...|. ++++++.+.   +               +.+.....+......-+++.+...+. 
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~-   78 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKID-   78 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecC-
Confidence            5899997 8999999999999996 488888754   1               11111211111111224445555553 


Q ss_pred             hhHHHHHhccCCEEEecCC
Q 043792           89 YHSLVNALKGCSGLFYSFE  107 (294)
Q Consensus        89 ~~~~~~~~~~~d~Vih~a~  107 (294)
                      .+.+.++++++|.||.+..
T Consensus        79 ~~~~~~~l~~~DlVi~~~d   97 (174)
T cd01487          79 ENNLEGLFGDCDIVVEAFD   97 (174)
T ss_pred             hhhHHHHhcCCCEEEECCC
Confidence            3567788899999999943

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=97.44  E-value=0.0062  Score=46.00  Aligned_cols=104  Identities=13%  Similarity=0.157  Sum_probs=64.6

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCC-------------------hhhHHHHHhhccCCCCeEEEECCCC
Q 043792           28 TVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGK-------------------LQCIEEELINYNEEKKLKVFQADPF   87 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-------------------~~~l~~~~~~~~~~~~v~~~~~Dl~   87 (294)
                      +|+|.|+ |.+|+++++.|...|. ++++++.+.-.                   .+.+.+.+......-+++.+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            5899997 9999999999999996 57777654211                   1112221111111223445555554


Q ss_pred             ChhHHHHHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcc
Q 043792           88 DYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLT  150 (294)
Q Consensus        88 ~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~  150 (294)
                      .. ...+.++++|+||.+....               .....+.+.|++. ++ .+|..++.+
T Consensus        80 ~~-~~~~~~~~~diVi~~~d~~---------------~~~~~l~~~~~~~-~i-~~i~~~~~g  124 (143)
T cd01483          80 ED-NLDDFLDGVDLVIDAIDNI---------------AVRRALNRACKEL-GI-PVIDAGGLG  124 (143)
T ss_pred             hh-hHHHHhcCCCEEEECCCCH---------------HHHHHHHHHHHHc-CC-CEEEEcCCC
Confidence            33 3466778999999987641               2244566777777 65 577776653

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=97.44  E-value=0.001  Score=55.61  Aligned_cols=68  Identities=19%  Similarity=0.089  Sum_probs=46.0

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHC-CCeEEEEe-cCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLR-GYTVHAAL-HNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~-r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      ++||.|+|++|.+|+.+++.+.+. +.++.++. ++++.....               -..++....++.++++++|+||
T Consensus         1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~---------------~~~~i~~~~dl~~ll~~~DvVi   65 (257)
T PRK00048          1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ---------------GALGVAITDDLEAVLADADVLI   65 (257)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc---------------CCCCccccCCHHHhccCCCEEE
Confidence            479999999999999999998874 68877754 444322110               1123333345666667899999


Q ss_pred             ecCCC
Q 043792          104 YSFEP  108 (294)
Q Consensus       104 h~a~~  108 (294)
                      ++..+
T Consensus        66 d~t~p   70 (257)
T PRK00048         66 DFTTP   70 (257)
T ss_pred             ECCCH
Confidence            88754

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=97.43  E-value=0.0015  Score=56.76  Aligned_cols=94  Identities=11%  Similarity=0.079  Sum_probs=54.7

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCe---EEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYT---VHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~  101 (294)
                      ..+||.|.||||++|..|++.|.+++|.   +..+....+.-+.+.    .    .+.+....++. +    +.++++|+
T Consensus         6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~----~----~~~~~~v~~~~-~----~~~~~~D~   72 (344)
T PLN02383          6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVT----F----EGRDYTVEELT-E----DSFDGVDI   72 (344)
T ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeee----e----cCceeEEEeCC-H----HHHcCCCE
Confidence            4579999999999999999999997763   444433222111111    1    11222222332 2    23468999


Q ss_pred             EEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792          102 LFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus       102 Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      ||-+++...                +..+...+.+. ++ ++|=.|+.
T Consensus        73 vf~a~p~~~----------------s~~~~~~~~~~-g~-~VIDlS~~  102 (344)
T PLN02383         73 ALFSAGGSI----------------SKKFGPIAVDK-GA-VVVDNSSA  102 (344)
T ss_pred             EEECCCcHH----------------HHHHHHHHHhC-CC-EEEECCch
Confidence            998775321                23344444445 64 68877875

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=97.42  E-value=0.015  Score=53.25  Aligned_cols=154  Identities=20%  Similarity=0.119  Sum_probs=91.8

Q ss_pred             CCCeEEEeCCC-chHHHHHHHHHHHCCCeEEEEecCCCCh--hhHHHHH-hhccCCCCeEEEECCCCChhHHHHHhc---
Q 043792           25 ATKTVCVMDAS-GHFASALVRRLLLRGYTVHAALHNHGKL--QCIEEEL-INYNEEKKLKVFQADPFDYHSLVNALK---   97 (294)
Q Consensus        25 ~~~~vlItGat-G~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~l~~~~-~~~~~~~~v~~~~~Dl~~~~~~~~~~~---   97 (294)
                      ..+..+||||+ |-||..++..|++.|.+|++...+-+..  +..+... +....+..+-++..+..+..++..+++   
T Consensus       395 ~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg  474 (866)
T COG4982         395 GDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIG  474 (866)
T ss_pred             ccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhc
Confidence            46789999986 8899999999999999999986654332  2222200 011233456677788777766665553   


Q ss_pred             ------------------cCCEEEecCCCCCCCCcc-----hhhhHhHhhHHHHHHHHHHHhcC---CC---cEEEEecC
Q 043792           98 ------------------GCSGLFYSFEPPSDHSTY-----DELTAEVETMAAHNVLEACAQTN---TV---DKVVFTSS  148 (294)
Q Consensus        98 ------------------~~d~Vih~a~~~~~~~~~-----~~~~~~~n~~~~~~ll~~~~~~~---~~---~~~v~~Ss  148 (294)
                                        ..|.+|-+|++.....-.     .+-.+++=+-...+++-.+++.+   ++   -++|...|
T Consensus       475 ~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLPgS  554 (866)
T COG4982         475 DEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLPGS  554 (866)
T ss_pred             cccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEecCC
Confidence                              126777777765433111     11122222333455555555441   12   24666555


Q ss_pred             cceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc
Q 043792          149 LTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR  202 (294)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~  202 (294)
                      .-   -|.         +--|            ..||.+|...+..+..|..+.
T Consensus       555 PN---rG~---------FGgD------------GaYgEsK~aldav~~RW~sEs  584 (866)
T COG4982         555 PN---RGM---------FGGD------------GAYGESKLALDAVVNRWHSES  584 (866)
T ss_pred             CC---CCc---------cCCC------------cchhhHHHHHHHHHHHhhccc
Confidence            31   111         1111            679999999999999988776

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=97.42  E-value=0.0011  Score=62.18  Aligned_cols=74  Identities=14%  Similarity=0.214  Sum_probs=62.9

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHH-hccCCEEEe
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNA-LKGCSGLFY  104 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~Vih  104 (294)
                      ..+|+|.|. |-+|+.+++.|.++|+++++++++++..+.+++        .+..++.+|.++++.++++ ++++|.||-
T Consensus       400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~--------~g~~v~~GDat~~~~L~~agi~~A~~vv~  470 (601)
T PRK03659        400 KPQVIIVGF-GRFGQVIGRLLMANKMRITVLERDISAVNLMRK--------YGYKVYYGDATQLELLRAAGAEKAEAIVI  470 (601)
T ss_pred             cCCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh--------CCCeEEEeeCCCHHHHHhcCCccCCEEEE
Confidence            468999997 999999999999999999999999877766655        2788999999999988876 578898887


Q ss_pred             cCCC
Q 043792          105 SFEP  108 (294)
Q Consensus       105 ~a~~  108 (294)
                      +...
T Consensus       471 ~~~d  474 (601)
T PRK03659        471 TCNE  474 (601)
T ss_pred             EeCC
Confidence            7663

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=97.41  E-value=0.0048  Score=49.35  Aligned_cols=106  Identities=14%  Similarity=0.112  Sum_probs=63.1

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCCh-------------------hhHHHHHhhccCCCCeEEEEC
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKL-------------------QCIEEELINYNEEKKLKVFQA   84 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-------------------~~l~~~~~~~~~~~~v~~~~~   84 (294)
                      +..+|+|.|++| +|+++++.|...|. ++++++.+.-..                   +.+.+.++.....-+++.+..
T Consensus        20 ~~s~VlIiG~gg-lG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~~   98 (197)
T cd01492          20 RSARILLIGLKG-LGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDTD   98 (197)
T ss_pred             HhCcEEEEcCCH-HHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEec
Confidence            467999999855 99999999999995 477776542111                   111221111112223444455


Q ss_pred             CCCChhHHHHHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcc
Q 043792           85 DPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLT  150 (294)
Q Consensus        85 Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~  150 (294)
                      .+.  +...+.++++|+||.+...               ......+-+.|++. ++ .+|+.++.+
T Consensus        99 ~~~--~~~~~~~~~~dvVi~~~~~---------------~~~~~~ln~~c~~~-~i-p~i~~~~~G  145 (197)
T cd01492          99 DIS--EKPEEFFSQFDVVVATELS---------------RAELVKINELCRKL-GV-KFYATGVHG  145 (197)
T ss_pred             Ccc--ccHHHHHhCCCEEEECCCC---------------HHHHHHHHHHHHHc-CC-CEEEEEecC
Confidence            554  2345667889999977442               11223345677777 76 577777654

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.41  E-value=0.00079  Score=57.14  Aligned_cols=71  Identities=17%  Similarity=0.174  Sum_probs=53.0

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ...+++|+|+|. |.+|+.+++.|...|.+|++.+|++++......   .     +...+     ..+++.+.+.++|+|
T Consensus       148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~---~-----g~~~~-----~~~~l~~~l~~aDiV  213 (287)
T TIGR02853       148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITE---M-----GLIPF-----PLNKLEEKVAEIDIV  213 (287)
T ss_pred             CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---C-----CCeee-----cHHHHHHHhccCCEE
Confidence            445789999998 889999999999999999999998754433322   1     22221     234577788899999


Q ss_pred             EecCC
Q 043792          103 FYSFE  107 (294)
Q Consensus       103 ih~a~  107 (294)
                      |++..
T Consensus       214 int~P  218 (287)
T TIGR02853       214 INTIP  218 (287)
T ss_pred             EECCC
Confidence            99863

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK08328 hypothetical protein; Provisional

Probab=97.40  E-value=0.006  Score=50.10  Aligned_cols=108  Identities=14%  Similarity=0.152  Sum_probs=64.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhH--------------------HHHHhhccCCCCeEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCI--------------------EEELINYNEEKKLKVF   82 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l--------------------~~~~~~~~~~~~v~~~   82 (294)
                      .+..+|+|.|+ |.+|+++++.|...|. ++++++.+.-....+                    ...+......-+++.+
T Consensus        25 L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~  103 (231)
T PRK08328         25 LKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETF  103 (231)
T ss_pred             HhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEE
Confidence            34678999998 8899999999999994 577776542111111                    1111111112234444


Q ss_pred             ECCCCChhHHHHHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcc
Q 043792           83 QADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLT  150 (294)
Q Consensus        83 ~~Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~  150 (294)
                      ...+ +.+.+.++++++|+||.+.-...               .-..+-++|.+. ++ .+|+-++.+
T Consensus       104 ~~~~-~~~~~~~~l~~~D~Vid~~d~~~---------------~r~~l~~~~~~~-~i-p~i~g~~~g  153 (231)
T PRK08328        104 VGRL-SEENIDEVLKGVDVIVDCLDNFE---------------TRYLLDDYAHKK-GI-PLVHGAVEG  153 (231)
T ss_pred             eccC-CHHHHHHHHhcCCEEEECCCCHH---------------HHHHHHHHHHHc-CC-CEEEEeecc
Confidence            5555 45567778889999999876421               112244566666 65 577766554

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=97.39  E-value=0.0045  Score=50.12  Aligned_cols=81  Identities=16%  Similarity=0.247  Sum_probs=52.1

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCe-EEEEecCC---C---------------ChhhHHHHHhhccCCCCeEEEEC
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYT-VHAALHNH---G---------------KLQCIEEELINYNEEKKLKVFQA   84 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~---~---------------~~~~l~~~~~~~~~~~~v~~~~~   84 (294)
                      .+..+|+|.|+ |.+|+.+++.|...|.. +++++.+.   +               +.+.+...+......-+++.+..
T Consensus        26 L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~  104 (212)
T PRK08644         26 LKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNE  104 (212)
T ss_pred             HhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEee
Confidence            34678999997 89999999999999954 77777752   1               11112221111112224445555


Q ss_pred             CCCChhHHHHHhccCCEEEecC
Q 043792           85 DPFDYHSLVNALKGCSGLFYSF  106 (294)
Q Consensus        85 Dl~~~~~~~~~~~~~d~Vih~a  106 (294)
                      .+++ +.+.++++++|+||.+.
T Consensus       105 ~i~~-~~~~~~~~~~DvVI~a~  125 (212)
T PRK08644        105 KIDE-DNIEELFKDCDIVVEAF  125 (212)
T ss_pred             ecCH-HHHHHHHcCCCEEEECC
Confidence            5543 55677888999999984

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=97.37  E-value=0.00044  Score=61.90  Aligned_cols=41  Identities=17%  Similarity=0.144  Sum_probs=36.2

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHH
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIE   67 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~   67 (294)
                      +|+|.|+|. |++|..++..|++.|++|+++++++++.+.+.
T Consensus         3 ~~kI~VIGl-G~~G~~~A~~La~~G~~V~~~D~~~~~v~~l~   43 (415)
T PRK11064          3 FETISVIGL-GYIGLPTAAAFASRQKQVIGVDINQHAVDTIN   43 (415)
T ss_pred             ccEEEEECc-chhhHHHHHHHHhCCCEEEEEeCCHHHHHHHH
Confidence            578999996 99999999999999999999999887766543

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.35  E-value=0.0011  Score=58.40  Aligned_cols=75  Identities=15%  Similarity=0.057  Sum_probs=57.6

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      ...+|+|+|+ |-+|+.+++.|...|.+|++++|++.+.+.+...  .     . ..+..+..+.+.+.+.+.++|+||+
T Consensus       166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~--~-----g-~~v~~~~~~~~~l~~~l~~aDvVI~  236 (370)
T TIGR00518       166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAE--F-----G-GRIHTRYSNAYEIEDAVKRADLLIG  236 (370)
T ss_pred             CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHh--c-----C-ceeEeccCCHHHHHHHHccCCEEEE
Confidence            4567999998 8999999999999999999999987665554431  1     1 1233455677888889999999999


Q ss_pred             cCCC
Q 043792          105 SFEP  108 (294)
Q Consensus       105 ~a~~  108 (294)
                      ++..
T Consensus       237 a~~~  240 (370)
T TIGR00518       237 AVLI  240 (370)
T ss_pred             cccc
Confidence            9754

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.34  E-value=0.0051  Score=53.95  Aligned_cols=107  Identities=18%  Similarity=0.153  Sum_probs=65.1

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCC-------------------ChhhHHHHHhhccCCCCeEEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHG-------------------KLQCIEEELINYNEEKKLKVFQ   83 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~-------------------~~~~l~~~~~~~~~~~~v~~~~   83 (294)
                      .+..+|+|.|+ |.+|+++++.|...|. ++++++.+.-                   +.+...+.++.....-+++.+.
T Consensus        26 L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~  104 (355)
T PRK05597         26 LFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSV  104 (355)
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEE
Confidence            34679999998 8899999999999984 5666666421                   1111222211112222344555


Q ss_pred             CCCCChhHHHHHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792           84 ADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus        84 ~Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      ..++ .+...++++++|+||.+....               ..-..+-++|.+. ++ .+|+.+..
T Consensus       105 ~~i~-~~~~~~~~~~~DvVvd~~d~~---------------~~r~~~n~~c~~~-~i-p~v~~~~~  152 (355)
T PRK05597        105 RRLT-WSNALDELRDADVILDGSDNF---------------DTRHLASWAAARL-GI-PHVWASIL  152 (355)
T ss_pred             eecC-HHHHHHHHhCCCEEEECCCCH---------------HHHHHHHHHHHHc-CC-CEEEEEEe
Confidence            5554 456677889999999997532               1112245566666 65 47766543

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.34  E-value=0.00093  Score=52.57  Aligned_cols=70  Identities=21%  Similarity=0.168  Sum_probs=50.1

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ...+++|.|+|. |-||+.+++.|..-|.+|++++|+.........   .     .+        ...++.++++++|+|
T Consensus        33 ~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~---~-----~~--------~~~~l~ell~~aDiv   95 (178)
T PF02826_consen   33 ELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGADE---F-----GV--------EYVSLDELLAQADIV   95 (178)
T ss_dssp             -STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHH---T-----TE--------EESSHHHHHHH-SEE
T ss_pred             ccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhccc---c-----cc--------eeeehhhhcchhhhh
Confidence            456899999997 999999999999999999999998765432222   1     12        223577788899999


Q ss_pred             EecCCCC
Q 043792          103 FYSFEPP  109 (294)
Q Consensus       103 ih~a~~~  109 (294)
                      +.+....
T Consensus        96 ~~~~plt  102 (178)
T PF02826_consen   96 SLHLPLT  102 (178)
T ss_dssp             EE-SSSS
T ss_pred             hhhhccc
Confidence            8886643

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.33  E-value=0.0012  Score=56.41  Aligned_cols=70  Identities=21%  Similarity=0.234  Sum_probs=52.9

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      ..+++|+|+|. |.+|+.+++.|...|.+|++++|++........   .     +.+++     ..+++.+.+.++|+||
T Consensus       150 l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~---~-----G~~~~-----~~~~l~~~l~~aDiVI  215 (296)
T PRK08306        150 IHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITE---M-----GLSPF-----HLSELAEEVGKIDIIF  215 (296)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---c-----CCeee-----cHHHHHHHhCCCCEEE
Confidence            35789999997 889999999999999999999998654433332   1     33332     2345677888999999


Q ss_pred             ecCC
Q 043792          104 YSFE  107 (294)
Q Consensus       104 h~a~  107 (294)
                      ++..
T Consensus       216 ~t~p  219 (296)
T PRK08306        216 NTIP  219 (296)
T ss_pred             ECCC
Confidence            9853

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.32  E-value=0.00068  Score=54.36  Aligned_cols=70  Identities=21%  Similarity=0.098  Sum_probs=49.5

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHh-ccCCE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNAL-KGCSG  101 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~-~~~d~  101 (294)
                      +..+|+|+|+|. |.+|+++++.|.+.|++|++.+++.+..+.+.+.  +     +...+  |.   +   +++ .++|+
T Consensus        25 ~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~--~-----g~~~v--~~---~---~l~~~~~Dv   88 (200)
T cd01075          25 SLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAEL--F-----GATVV--AP---E---EIYSVDADV   88 (200)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH--c-----CCEEE--cc---h---hhccccCCE
Confidence            456789999998 7999999999999999999888876555544441  1     22222  21   1   223 27999


Q ss_pred             EEecCCC
Q 043792          102 LFYSFEP  108 (294)
Q Consensus       102 Vih~a~~  108 (294)
                      ++.++..
T Consensus        89 ~vp~A~~   95 (200)
T cd01075          89 FAPCALG   95 (200)
T ss_pred             EEecccc
Confidence            9988763

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=97.32  E-value=0.00082  Score=60.27  Aligned_cols=82  Identities=13%  Similarity=0.105  Sum_probs=51.5

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeE-----EE-ECCCCChhHHHHHhccCC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLK-----VF-QADPFDYHSLVNALKGCS  100 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~-----~~-~~Dl~~~~~~~~~~~~~d  100 (294)
                      |+|.|+|. |++|..++..|++.|++|+++++++++.+.+.... .....++++     .+ .+.+.-..++.++++++|
T Consensus         1 mkI~vIGl-G~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~-~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~ad   78 (411)
T TIGR03026         1 MKIAVIGL-GYVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGK-SPIYEPGLDELLAKALAAGRLRATTDYEDAIRDAD   78 (411)
T ss_pred             CEEEEECC-CchhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCC-CCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCC
Confidence            47999986 99999999999999999999999877665543300 000000000     00 000111123455678899


Q ss_pred             EEEecCCCCC
Q 043792          101 GLFYSFEPPS  110 (294)
Q Consensus       101 ~Vih~a~~~~  110 (294)
                      +||-+...+.
T Consensus        79 vvii~vpt~~   88 (411)
T TIGR03026        79 VIIICVPTPL   88 (411)
T ss_pred             EEEEEeCCCC
Confidence            9999977654

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.31  E-value=0.0067  Score=50.73  Aligned_cols=106  Identities=14%  Similarity=0.173  Sum_probs=65.3

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCCh-------------------hhHHHHHhhccCCCCeEEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKL-------------------QCIEEELINYNEEKKLKVFQ   83 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~-------------------~~l~~~~~~~~~~~~v~~~~   83 (294)
                      .+..+|+|.|+ |.+|+++++.|+..| -++++++.+.-..                   +.+.+.  +...++.+++..
T Consensus        28 L~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~r--l~~INP~~~V~~  104 (268)
T PRK15116         28 FADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAER--IRQINPECRVTV  104 (268)
T ss_pred             hcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHH--HHhHCCCcEEEE
Confidence            35679999998 899999999999999 6788777642111                   111221  112233333322


Q ss_pred             -CCCCChhHHHHHhc-cCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792           84 -ADPFDYHSLVNALK-GCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus        84 -~Dl~~~~~~~~~~~-~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                       -+..+++.+.+++. ++|+||.+.....               .-..+.+.|.+. ++ .||..++.
T Consensus       105 i~~~i~~e~~~~ll~~~~D~VIdaiD~~~---------------~k~~L~~~c~~~-~i-p~I~~gGa  155 (268)
T PRK15116        105 VDDFITPDNVAEYMSAGFSYVIDAIDSVR---------------PKAALIAYCRRN-KI-PLVTTGGA  155 (268)
T ss_pred             EecccChhhHHHHhcCCCCEEEEcCCCHH---------------HHHHHHHHHHHc-CC-CEEEECCc
Confidence             23334566666664 6899999877422               223577788777 75 46655544

>PRK08655 prephenate dehydrogenase; Provisional

Probab=97.31  E-value=0.0026  Score=57.35  Aligned_cols=68  Identities=15%  Similarity=0.178  Sum_probs=48.9

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEecC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSF  106 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~a  106 (294)
                      |+|+|+||+|.+|..+++.|.+.|++|++++|+++....+..+  .     ++.+       ..+..+.+.++|+||-+.
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~--~-----gv~~-------~~~~~e~~~~aDvVIlav   66 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKE--L-----GVEY-------ANDNIDAAKDADIVIISV   66 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHH--c-----CCee-------ccCHHHHhccCCEEEEec
Confidence            5899999999999999999999999999999987554333331  1     2211       112345567889988876


Q ss_pred             CC
Q 043792          107 EP  108 (294)
Q Consensus       107 ~~  108 (294)
                      ..
T Consensus        67 p~   68 (437)
T PRK08655         67 PI   68 (437)
T ss_pred             CH
Confidence            53

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=97.29  E-value=0.0029  Score=54.02  Aligned_cols=164  Identities=13%  Similarity=0.089  Sum_probs=97.0

Q ss_pred             EeCCCchHHHHHHHHHHHCC--CeEEEEecCCCChhhHHHHHhhc--cCCCCeEEEECCCCChhHHHHHhccCCEEEecC
Q 043792           31 VMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELINY--NEEKKLKVFQADPFDYHSLVNALKGCSGLFYSF  106 (294)
Q Consensus        31 ItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~~~--~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~a  106 (294)
                      |+|+ |.+|++++..|+..+  -++..++.+.+..+....++.-.  ....++++..   .+    .+.++++|+||-.|
T Consensus         1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~----~~~~~daDivVita   72 (299)
T TIGR01771         1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRS---GD----YSDCKDADLVVITA   72 (299)
T ss_pred             CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEec---CC----HHHHCCCCEEEECC
Confidence            4676 999999999999887  46888888776554333221110  0112233332   22    24678999999999


Q ss_pred             CCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCc-EEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhH
Q 043792          107 EPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD-KVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHG  185 (294)
Q Consensus       107 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~  185 (294)
                      +.+.....++.+.++.|+.....+.+.+.+. +.+ .++.+|-.....    .    ........ .++.      ...|
T Consensus        73 g~~rk~g~~R~dll~~N~~i~~~~~~~i~~~-~p~~~vivvsNP~d~~----t----~~~~~~sg-~p~~------~viG  136 (299)
T TIGR01771        73 GAPQKPGETRLELVGRNVRIMKSIVPEVVKS-GFDGIFLVATNPVDIL----T----YVAWKLSG-FPKN------RVIG  136 (299)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEeCCHHHHH----H----HHHHHHhC-CCHH------HEEe
Confidence            9877666666799999999999999999888 433 455554321000    0    00000000 0000      2233


Q ss_pred             h-hHHHHHHHHHHHHHhcCCeEEEEecCceeCCCC
Q 043792          186 L-SKTLAEKTAWALAMDRGISMVSINGGLVMGPDV  219 (294)
Q Consensus       186 ~-sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~  219 (294)
                      . +.....++-...+++.+++..-++. .|+|.+.
T Consensus       137 ~gt~LDs~R~~~~la~~l~v~~~~V~~-~v~GeHG  170 (299)
T TIGR01771       137 SGTVLDTARLRYLLAEKLGVDPQSVHA-YIIGEHG  170 (299)
T ss_pred             ccchHHHHHHHHHHHHHhCcCcCeEEE-EEEecCC
Confidence            3 3333444455555666777777774 4888873

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=97.28  E-value=0.0095  Score=49.21  Aligned_cols=105  Identities=12%  Similarity=0.125  Sum_probs=64.3

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCCh-------------------hhHHHHHhhccCCCC--eEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKL-------------------QCIEEELINYNEEKK--LKV   81 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~-------------------~~l~~~~~~~~~~~~--v~~   81 (294)
                      .+..+|+|.|+ |.+|+.+++.|...| -++++++++.-..                   +.+.+.+  ...++.  ++.
T Consensus        22 L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l--~~inp~v~i~~   98 (240)
T TIGR02355        22 LKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDAL--TQINPHIAINP   98 (240)
T ss_pred             HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHH--HHHCCCcEEEE
Confidence            34579999998 899999999999998 4566666542211                   1111211  112333  344


Q ss_pred             EECCCCChhHHHHHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792           82 FQADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus        82 ~~~Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      +...+ +.+.+.++++++|+||.+.....               .-..+-++|.+. ++ .+|+-++.
T Consensus        99 ~~~~i-~~~~~~~~~~~~DlVvd~~D~~~---------------~r~~ln~~~~~~-~i-p~v~~~~~  148 (240)
T TIGR02355        99 INAKL-DDAELAALIAEHDIVVDCTDNVE---------------VRNQLNRQCFAA-KV-PLVSGAAI  148 (240)
T ss_pred             EeccC-CHHHHHHHhhcCCEEEEcCCCHH---------------HHHHHHHHHHHc-CC-CEEEEEec
Confidence            44444 34567788899999999875321               123345667777 65 57765543

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=97.27  E-value=0.00082  Score=57.47  Aligned_cols=67  Identities=13%  Similarity=0.177  Sum_probs=49.4

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEec
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYS  105 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~  105 (294)
                      +|+|.|+|. |.+|+.+++.|.+.|++|.+++|++++.+.+..   .     ++..       ..++.++++++|+||-+
T Consensus         2 ~~~IgviG~-G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~---~-----g~~~-------~~~~~e~~~~~d~vi~~   65 (296)
T PRK11559          2 TMKVGFIGL-GIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIA---A-----GAET-------ASTAKAVAEQCDVIITM   65 (296)
T ss_pred             CceEEEEcc-CHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH---C-----CCee-------cCCHHHHHhcCCEEEEe
Confidence            468999996 999999999999999999999988766554433   1     2211       12345566789999888


Q ss_pred             CCC
Q 043792          106 FEP  108 (294)
Q Consensus       106 a~~  108 (294)
                      ...
T Consensus        66 vp~   68 (296)
T PRK11559         66 LPN   68 (296)
T ss_pred             CCC
Confidence            653

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=97.26  E-value=0.0013  Score=59.68  Aligned_cols=76  Identities=13%  Similarity=0.268  Sum_probs=52.5

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHC--CCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECC------------CCChhH
Q 043792           26 TKTVCVMDASGHFASALVRRLLLR--GYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQAD------------PFDYHS   91 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~D------------l~~~~~   91 (294)
                      ||+|.|.|. |++|..++..|++.  |++|++++.++++.+.+...        ...+..-+            +.-..+
T Consensus         1 ~m~I~ViG~-GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g--------~~~~~e~gl~ell~~~~~~~l~~t~~   71 (473)
T PLN02353          1 MVKICCIGA-GYVGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSD--------QLPIYEPGLDEVVKQCRGKNLFFSTD   71 (473)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcC--------CCccCCCCHHHHHHHhhcCCEEEEcC
Confidence            578999986 99999999999998  48899999988777665541        11111111            111122


Q ss_pred             HHHHhccCCEEEecCCCCC
Q 043792           92 LVNALKGCSGLFYSFEPPS  110 (294)
Q Consensus        92 ~~~~~~~~d~Vih~a~~~~  110 (294)
                      +.+.++++|++|-|.+.+.
T Consensus        72 ~~~~i~~advi~I~V~TP~   90 (473)
T PLN02353         72 VEKHVAEADIVFVSVNTPT   90 (473)
T ss_pred             HHHHHhcCCEEEEEeCCCC
Confidence            3456678999999987655

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.26  E-value=0.0011  Score=55.91  Aligned_cols=73  Identities=18%  Similarity=0.174  Sum_probs=50.8

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      .+++++|+|+ |.+|+.++..|++.|++|++++|+.++.+.+.+.+   .....+...  ++.+     ..+.++|+||+
T Consensus       116 ~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~---~~~~~~~~~--~~~~-----~~~~~~DivIn  184 (270)
T TIGR00507       116 PNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERF---QRYGEIQAF--SMDE-----LPLHRVDLIIN  184 (270)
T ss_pred             cCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---hhcCceEEe--chhh-----hcccCccEEEE
Confidence            4679999998 89999999999999999999999877766665521   111112222  1111     12357899999


Q ss_pred             cCCC
Q 043792          105 SFEP  108 (294)
Q Consensus       105 ~a~~  108 (294)
                      +.+.
T Consensus       185 atp~  188 (270)
T TIGR00507       185 ATSA  188 (270)
T ss_pred             CCCC
Confidence            9664

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=97.26  E-value=0.00055  Score=55.81  Aligned_cols=76  Identities=16%  Similarity=0.107  Sum_probs=50.5

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCe--EEEECCCCChhHHHHHhccCCEEEe
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKL--KVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v--~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      |||.|+||+|.+|+.+++.|.+.|++|.+.+|++++.+.+...........++  .....      ...+.++++|+||-
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~~------~~~ea~~~aDvVil   74 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTGA------DNAEAAKRADVVIL   74 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEEEe------ChHHHHhcCCEEEE
Confidence            58999999999999999999999999999999877665554311000000011  11111      12455678899888


Q ss_pred             cCCC
Q 043792          105 SFEP  108 (294)
Q Consensus       105 ~a~~  108 (294)
                      +...
T Consensus        75 avp~   78 (219)
T TIGR01915        75 AVPW   78 (219)
T ss_pred             ECCH
Confidence            8663

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=97.25  E-value=0.0013  Score=52.28  Aligned_cols=68  Identities=18%  Similarity=0.122  Sum_probs=46.3

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC-ChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG-KLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      ||+|.|.| +|.||+.|+++|.+.||+|++-+|+.. +.....+++     ...        -...+..++.+.+|+||-
T Consensus         1 m~~~~i~G-tGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l-----~~~--------i~~~~~~dA~~~aDVVvL   66 (211)
T COG2085           1 MMIIAIIG-TGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAAL-----GPL--------ITGGSNEDAAALADVVVL   66 (211)
T ss_pred             CcEEEEec-cChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhh-----ccc--------cccCChHHHHhcCCEEEE
Confidence            46676655 699999999999999999999966544 444444321     111        122345667788999887


Q ss_pred             cCC
Q 043792          105 SFE  107 (294)
Q Consensus       105 ~a~  107 (294)
                      ..-
T Consensus        67 AVP   69 (211)
T COG2085          67 AVP   69 (211)
T ss_pred             ecc
Confidence            654

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=97.23  E-value=0.00077  Score=57.41  Aligned_cols=36  Identities=19%  Similarity=0.082  Sum_probs=29.6

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCC
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRG-YTVHAALHNH   60 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~   60 (294)
                      +|+||.|.||+|+.|..|++.|..+. .++...+.+.
T Consensus         1 ~~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~   37 (349)
T COG0002           1 MMIKVGIVGASGYTGLELLRLLAGHPDVELILISSRE   37 (349)
T ss_pred             CCceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechh
Confidence            46899999999999999999999985 5666655444

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=97.23  E-value=0.0082  Score=52.88  Aligned_cols=106  Identities=15%  Similarity=0.172  Sum_probs=64.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCC-------------------hhhHHHHHhhccCCCCeEEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGK-------------------LQCIEEELINYNEEKKLKVFQ   83 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-------------------~~~l~~~~~~~~~~~~v~~~~   83 (294)
                      .+..+|+|.|+ |.+|+++++.|...|. ++++++.+.-.                   .+.+...+......-+++.+.
T Consensus        39 l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~  117 (370)
T PRK05600         39 LHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALR  117 (370)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEee
Confidence            34679999998 8899999999999994 78877765211                   111122111111122344545


Q ss_pred             CCCCChhHHHHHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecC
Q 043792           84 ADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSS  148 (294)
Q Consensus        84 ~Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss  148 (294)
                      ..+ +.+.+.++++++|+||.|.-..               ..-..+-++|.+. ++ .+|+.+.
T Consensus       118 ~~i-~~~~~~~~~~~~DlVid~~Dn~---------------~~r~~in~~~~~~-~i-P~v~~~~  164 (370)
T PRK05600        118 ERL-TAENAVELLNGVDLVLDGSDSF---------------ATKFLVADAAEIT-GT-PLVWGTV  164 (370)
T ss_pred             eec-CHHHHHHHHhCCCEEEECCCCH---------------HHHHHHHHHHHHc-CC-CEEEEEE
Confidence            555 3556778889999999987632               2222344566666 65 4666554

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=97.23  E-value=0.0017  Score=57.45  Aligned_cols=68  Identities=21%  Similarity=0.207  Sum_probs=54.4

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      |++|+|.|+ |.+|+.++..+.+.|++|++++.+++.....     .     --.++.+|..|.+.+.++.+.+|+|..
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~-----~-----ad~~~~~~~~D~~~l~~~a~~~dvit~   69 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQ-----V-----ADEVIVADYDDVAALRELAEQCDVITY   69 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhH-----h-----CceEEecCCCCHHHHHHHHhcCCEEEe
Confidence            578999998 8999999999999999999999876542211     1     114566889999999999999998754

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.22  E-value=0.0021  Score=49.90  Aligned_cols=59  Identities=24%  Similarity=0.205  Sum_probs=47.2

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      +..+++|+|+|+++.+|..+++.|.++|.+|+++.|+.                             +++.+.+.++|+|
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~-----------------------------~~l~~~l~~aDiV   91 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT-----------------------------KNLKEHTKQADIV   91 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc-----------------------------hhHHHHHhhCCEE
Confidence            46789999999977789999999999999988887653                             2345567788888


Q ss_pred             EecCCCCC
Q 043792          103 FYSFEPPS  110 (294)
Q Consensus       103 ih~a~~~~  110 (294)
                      |.+.+.+.
T Consensus        92 Isat~~~~   99 (168)
T cd01080          92 IVAVGKPG   99 (168)
T ss_pred             EEcCCCCc
Confidence            88876544

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.21  E-value=0.0018  Score=54.89  Aligned_cols=74  Identities=19%  Similarity=0.220  Sum_probs=52.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ...++|+|.|+ |..|+.++..|.+.|. +|++++|+..+.+.+.+.+..  ......+...     +++.+.+.++|+|
T Consensus       125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~--~~~~~~~~~~-----~~~~~~~~~aDiV  196 (284)
T PRK12549        125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNA--RFPAARATAG-----SDLAAALAAADGL  196 (284)
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHh--hCCCeEEEec-----cchHhhhCCCCEE
Confidence            34589999998 7899999999999996 799999998887777663211  1112222221     2344556789999


Q ss_pred             Eec
Q 043792          103 FYS  105 (294)
Q Consensus       103 ih~  105 (294)
                      |++
T Consensus       197 Ina  199 (284)
T PRK12549        197 VHA  199 (284)
T ss_pred             EEC
Confidence            999

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=97.20  E-value=0.015  Score=46.53  Aligned_cols=80  Identities=13%  Similarity=0.145  Sum_probs=53.1

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecC---CCChhh---------------HHHHHhhccCCCCeEEEEC
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHN---HGKLQC---------------IEEELINYNEEKKLKVFQA   84 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~---~~~~~~---------------l~~~~~~~~~~~~v~~~~~   84 (294)
                      .+.++|+|.|+ |.+|+.++..|...|. ++++++++   .+....               +...+......-+++.+..
T Consensus        19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~   97 (200)
T TIGR02354        19 LEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDE   97 (200)
T ss_pred             HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeee
Confidence            34679999998 8899999999999997 68888876   221111               1111101111223445555


Q ss_pred             CCCChhHHHHHhccCCEEEec
Q 043792           85 DPFDYHSLVNALKGCSGLFYS  105 (294)
Q Consensus        85 Dl~~~~~~~~~~~~~d~Vih~  105 (294)
                      +++ .+.+.++++++|.||.+
T Consensus        98 ~i~-~~~~~~~~~~~DlVi~a  117 (200)
T TIGR02354        98 KIT-EENIDKFFKDADIVCEA  117 (200)
T ss_pred             eCC-HhHHHHHhcCCCEEEEC
Confidence            663 46678888999999998

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=97.19  E-value=0.012  Score=48.78  Aligned_cols=106  Identities=15%  Similarity=0.132  Sum_probs=64.5

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCCh-------------------hhHHHHHhhccCCCCeEEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKL-------------------QCIEEELINYNEEKKLKVFQ   83 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-------------------~~l~~~~~~~~~~~~v~~~~   83 (294)
                      .+..+|+|.|+ |.+|+++++.|+..|. ++++++.+.-..                   +.+.+.++.....-+++.+.
T Consensus        30 L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~  108 (245)
T PRK05690         30 LKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETIN  108 (245)
T ss_pred             hcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence            35689999998 9999999999999994 677766532111                   11122111111122344555


Q ss_pred             CCCCChhHHHHHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecC
Q 043792           84 ADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSS  148 (294)
Q Consensus        84 ~Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss  148 (294)
                      ..++ .+.+.++++++|+||.+....               ..-..+-++|.+. ++ .+|+.++
T Consensus       109 ~~i~-~~~~~~~~~~~DiVi~~~D~~---------------~~r~~ln~~~~~~-~i-p~v~~~~  155 (245)
T PRK05690        109 ARLD-DDELAALIAGHDLVLDCTDNV---------------ATRNQLNRACFAA-KK-PLVSGAA  155 (245)
T ss_pred             ccCC-HHHHHHHHhcCCEEEecCCCH---------------HHHHHHHHHHHHh-CC-EEEEeee
Confidence            5553 456777889999999996421               1122355666666 64 5766544

>PRK08223 hypothetical protein; Validated

Probab=97.17  E-value=0.016  Score=48.83  Aligned_cols=109  Identities=17%  Similarity=0.134  Sum_probs=64.8

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCCh-------------------hhHHHHHhhccCCCCeEEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKL-------------------QCIEEELINYNEEKKLKVFQ   83 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-------------------~~l~~~~~~~~~~~~v~~~~   83 (294)
                      .+..+|+|.|+ |.+|++++..|+..|. ++.+++.+.-..                   +...+.++.....-+++.+.
T Consensus        25 L~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~  103 (287)
T PRK08223         25 LRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFP  103 (287)
T ss_pred             HhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            34679999998 8899999999999984 566666532111                   11122111111222344455


Q ss_pred             CCCCChhHHHHHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792           84 ADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus        84 ~Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      ..++ .+...++++++|+||.+.-...             +..-..+-++|.+. ++ .+|+-+..
T Consensus       104 ~~l~-~~n~~~ll~~~DlVvD~~D~~~-------------~~~r~~ln~~c~~~-~i-P~V~~~~~  153 (287)
T PRK08223        104 EGIG-KENADAFLDGVDVYVDGLDFFE-------------FDARRLVFAACQQR-GI-PALTAAPL  153 (287)
T ss_pred             cccC-ccCHHHHHhCCCEEEECCCCCc-------------HHHHHHHHHHHHHc-CC-CEEEEecc
Confidence            5554 4567788899999986654221             12223456677777 75 57776543

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.15  E-value=0.002  Score=55.78  Aligned_cols=98  Identities=17%  Similarity=0.195  Sum_probs=63.2

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCC---hhH-HHHHh-cc
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFD---YHS-LVNAL-KG   98 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~---~~~-~~~~~-~~   98 (294)
                      ..+.+|||+||+|.+|..++..+...|.+|++++++.++.+.+.+   +     +++.+ .|..+   ... +.... .+
T Consensus       137 ~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~---l-----Ga~~v-i~~~~~~~~~~~~~~~~~~g  207 (325)
T TIGR02825       137 KGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKK---L-----GFDVA-FNYKTVKSLEETLKKASPDG  207 (325)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---c-----CCCEE-EeccccccHHHHHHHhCCCC
Confidence            456899999999999999999998999999999888766665544   2     22221 12222   222 22222 25


Q ss_pred             CCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792           99 CSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      +|+|+++.+...                ....++.++..   .++|.++..
T Consensus       208 vdvv~d~~G~~~----------------~~~~~~~l~~~---G~iv~~G~~  239 (325)
T TIGR02825       208 YDCYFDNVGGEF----------------SNTVIGQMKKF---GRIAICGAI  239 (325)
T ss_pred             eEEEEECCCHHH----------------HHHHHHHhCcC---cEEEEecch
Confidence            899999877311                23445555544   478877653

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=97.15  E-value=0.0019  Score=56.06  Aligned_cols=84  Identities=15%  Similarity=0.151  Sum_probs=56.2

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeE-EEECC-----CCChhHHHHHhccCC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLK-VFQAD-----PFDYHSLVNALKGCS  100 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~-~~~~D-----l~~~~~~~~~~~~~d  100 (294)
                      |||.|+|. ||+|......|.+.||+|++++.++++.+.+.... .+...++++ +++-+     +.=-.++++++++.|
T Consensus         1 MkI~viGt-GYVGLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~-~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~~~ad   78 (414)
T COG1004           1 MKITVIGT-GYVGLVTGACLAELGHEVVCVDIDESKVELLNKGI-SPIYEPGLEELLKENLASGRLRFTTDYEEAVKDAD   78 (414)
T ss_pred             CceEEECC-chHHHHHHHHHHHcCCeEEEEeCCHHHHHHHhCCC-CCCcCccHHHHHHhccccCcEEEEcCHHHHHhcCC
Confidence            78999995 99999999999999999999999888776654410 001111111 00001     111234667788999


Q ss_pred             EEEecCCCCCCC
Q 043792          101 GLFYSFEPPSDH  112 (294)
Q Consensus       101 ~Vih~a~~~~~~  112 (294)
                      ++|-+.+.+...
T Consensus        79 v~fIavgTP~~~   90 (414)
T COG1004          79 VVFIAVGTPPDE   90 (414)
T ss_pred             EEEEEcCCCCCC
Confidence            999998876643

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=97.15  E-value=0.0011  Score=46.39  Aligned_cols=69  Identities=20%  Similarity=0.269  Sum_probs=49.2

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCC---CeEEEE-ecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           28 TVCVMDASGHFASALVRRLLLRG---YTVHAA-LHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g---~~V~~~-~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      ||.|+|+ |.+|+.|++.|++.|   ++|... +|++++.+.+..++       .+.+...      +..++++++|+||
T Consensus         1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~-------~~~~~~~------~~~~~~~~advvi   66 (96)
T PF03807_consen    1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY-------GVQATAD------DNEEAAQEADVVI   66 (96)
T ss_dssp             EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC-------TTEEESE------EHHHHHHHTSEEE
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh-------ccccccC------ChHHhhccCCEEE
Confidence            6788875 999999999999999   999965 88888777776621       2222221      3555677899999


Q ss_pred             ecCCCCC
Q 043792          104 YSFEPPS  110 (294)
Q Consensus       104 h~a~~~~  110 (294)
                      -+.-+..
T Consensus        67 lav~p~~   73 (96)
T PF03807_consen   67 LAVKPQQ   73 (96)
T ss_dssp             E-S-GGG
T ss_pred             EEECHHH
Confidence            9977543

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=97.15  E-value=0.0021  Score=55.35  Aligned_cols=80  Identities=18%  Similarity=0.108  Sum_probs=51.7

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHh----hccCCCCeE--EEECCCCChhHHHHHhccC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELI----NYNEEKKLK--VFQADPFDYHSLVNALKGC   99 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~----~~~~~~~v~--~~~~Dl~~~~~~~~~~~~~   99 (294)
                      .++|.|+|+ |-+|+.++..|+..|++|++++++++..+.....+.    .... .+..  -....+.-..++.+++.++
T Consensus         7 i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~i~~~~~l~~av~~a   84 (321)
T PRK07066          7 IKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALER-QGLAPGASPARLRFVATIEACVADA   84 (321)
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHH-cCCChhhHHhhceecCCHHHHhcCC
Confidence            478999997 999999999999999999999998765443222100    0000 0000  0001111123466788999


Q ss_pred             CEEEecCC
Q 043792          100 SGLFYSFE  107 (294)
Q Consensus       100 d~Vih~a~  107 (294)
                      |.||-++.
T Consensus        85 DlViEavp   92 (321)
T PRK07066         85 DFIQESAP   92 (321)
T ss_pred             CEEEECCc
Confidence            99999875

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.14  E-value=0.011  Score=48.49  Aligned_cols=103  Identities=11%  Similarity=0.088  Sum_probs=62.3

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCC-------------------hhhHHHHHhhccCCCC--eEEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGK-------------------LQCIEEELINYNEEKK--LKVF   82 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-------------------~~~l~~~~~~~~~~~~--v~~~   82 (294)
                      +..+|+|.|. |.+|+++++.|+..|. ++++++.+.-.                   .+.+.+.+  ...++.  ++.+
T Consensus        10 ~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l--~~inP~~~V~~~   86 (231)
T cd00755          10 RNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERI--RDINPECEVDAV   86 (231)
T ss_pred             hCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHH--HHHCCCcEEEEe
Confidence            4578999998 8999999999999984 67766653211                   11112211  112233  3444


Q ss_pred             ECCCCChhHHHHHhc-cCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecC
Q 043792           83 QADPFDYHSLVNALK-GCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSS  148 (294)
Q Consensus        83 ~~Dl~~~~~~~~~~~-~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss  148 (294)
                      ...+ +++.+.+++. ++|+||.+....               ..-..+.+.|.+. ++ .||...+
T Consensus        87 ~~~i-~~~~~~~l~~~~~D~VvdaiD~~---------------~~k~~L~~~c~~~-~i-p~I~s~g  135 (231)
T cd00755          87 EEFL-TPDNSEDLLGGDPDFVVDAIDSI---------------RAKVALIAYCRKR-KI-PVISSMG  135 (231)
T ss_pred             eeec-CHhHHHHHhcCCCCEEEEcCCCH---------------HHHHHHHHHHHHh-CC-CEEEEeC
Confidence            4444 3455666664 689999986532               2234567888877 75 4665444

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=97.13  E-value=0.0033  Score=54.76  Aligned_cols=79  Identities=16%  Similarity=0.095  Sum_probs=55.0

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----c
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----G   98 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----~   98 (294)
                      ...+++|||.||+|.+|+.+++.+...|..+++.+++.+..+..+.   +     +.. ...|..+++-.+...+    +
T Consensus       155 ~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~---l-----GAd-~vvdy~~~~~~e~~kk~~~~~  225 (347)
T KOG1198|consen  155 LSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKK---L-----GAD-EVVDYKDENVVELIKKYTGKG  225 (347)
T ss_pred             cCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHH---c-----CCc-EeecCCCHHHHHHHHhhcCCC
Confidence            4567899999999999999999999999555555666666655554   3     211 2236666443333333    4


Q ss_pred             CCEEEecCCCCC
Q 043792           99 CSGLFYSFEPPS  110 (294)
Q Consensus        99 ~d~Vih~a~~~~  110 (294)
                      +|+|++|++...
T Consensus       226 ~DvVlD~vg~~~  237 (347)
T KOG1198|consen  226 VDVVLDCVGGST  237 (347)
T ss_pred             ccEEEECCCCCc
Confidence            899999998754

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=97.10  E-value=0.006  Score=44.67  Aligned_cols=72  Identities=17%  Similarity=0.161  Sum_probs=44.5

Q ss_pred             eEEEeCCCchHHHHHHHHHHHC-CCeEEEE-ecCCCChhhHHHHHhhccCCCCeEEE-ECCCCChhHHHHHhccCCEEEe
Q 043792           28 TVCVMDASGHFASALVRRLLLR-GYTVHAA-LHNHGKLQCIEEELINYNEEKKLKVF-QADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~l~~~~~~~~~~~~v~~~-~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      ||.|+|++|.+|..+++.|.+. ++++.++ +++.+..+.+..   .   .+++..+ ..++ +.+.+.  ..++|+||-
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~---~---~~~~~~~~~~~~-~~~~~~--~~~~DvV~~   71 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSE---A---GPHLKGEVVLEL-EPEDFE--ELAVDIVFL   71 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHHH---H---Cccccccccccc-ccCChh--hcCCCEEEE
Confidence            5889999999999999999994 8888888 444333333322   1   1122211 2222 222333  257899998


Q ss_pred             cCCC
Q 043792          105 SFEP  108 (294)
Q Consensus       105 ~a~~  108 (294)
                      +...
T Consensus        72 ~~~~   75 (122)
T smart00859       72 ALPH   75 (122)
T ss_pred             cCCc
Confidence            8775

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.09  E-value=0.0051  Score=53.15  Aligned_cols=75  Identities=17%  Similarity=0.099  Sum_probs=50.4

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCC-hhHHHHHhccCCEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFD-YHSLVNALKGCSGL  102 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~-~~~~~~~~~~~d~V  102 (294)
                      ..+.+|+|+||+|.+|..+++.+...|.+|++++++.+..+.+..   .     ....+. +..+ .+.+.+. .++|.|
T Consensus       161 ~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~---~-----~~~~~~-~~~~~~~~~~~~-~~~d~v  230 (332)
T cd08259         161 KKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKE---L-----GADYVI-DGSKFSEDVKKL-GGADVV  230 (332)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH---c-----CCcEEE-ecHHHHHHHHhc-cCCCEE
Confidence            346789999999999999999999999999999887655444433   1     121111 2211 1222222 268999


Q ss_pred             EecCCC
Q 043792          103 FYSFEP  108 (294)
Q Consensus       103 ih~a~~  108 (294)
                      +++++.
T Consensus       231 ~~~~g~  236 (332)
T cd08259         231 IELVGS  236 (332)
T ss_pred             EECCCh
Confidence            999873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.09  E-value=0.0013  Score=59.80  Aligned_cols=77  Identities=17%  Similarity=0.013  Sum_probs=51.2

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-cCCEEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-GCSGLF  103 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-~~d~Vi  103 (294)
                      .+++|+|||++| +|..+++.|+++|++|.+.+++..........  +.  ..++++..+...  ..   .+. ++|.||
T Consensus         4 ~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~--l~--~~g~~~~~~~~~--~~---~~~~~~d~vV   73 (447)
T PRK02472          4 QNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQE--LL--EEGIKVICGSHP--LE---LLDEDFDLMV   73 (447)
T ss_pred             CCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHH--HH--hcCCEEEeCCCC--HH---HhcCcCCEEE
Confidence            468999999977 99999999999999999998765432222111  11  124555544321  11   133 389999


Q ss_pred             ecCCCCCC
Q 043792          104 YSFEPPSD  111 (294)
Q Consensus       104 h~a~~~~~  111 (294)
                      ..+|....
T Consensus        74 ~s~gi~~~   81 (447)
T PRK02472         74 KNPGIPYT   81 (447)
T ss_pred             ECCCCCCC
Confidence            99987654

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=97.09  E-value=0.0014  Score=61.70  Aligned_cols=73  Identities=21%  Similarity=0.277  Sum_probs=62.0

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHH-hccCCEEEe
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNA-LKGCSGLFY  104 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~Vih  104 (294)
                      ..+|+|.|. |-+|+.+++.|.++|+++++++.+++..+.+++        .+.+++.+|.++++.++++ ++++|.||-
T Consensus       400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~--------~g~~v~~GDat~~~~L~~agi~~A~~vvv  470 (621)
T PRK03562        400 QPRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRK--------FGMKVFYGDATRMDLLESAGAAKAEVLIN  470 (621)
T ss_pred             cCcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh--------cCCeEEEEeCCCHHHHHhcCCCcCCEEEE
Confidence            468999998 999999999999999999999999887776655        2788999999999988754 567888887


Q ss_pred             cCC
Q 043792          105 SFE  107 (294)
Q Consensus       105 ~a~  107 (294)
                      +..
T Consensus       471 ~~~  473 (621)
T PRK03562        471 AID  473 (621)
T ss_pred             EeC
Confidence            765

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=97.06  E-value=0.001  Score=56.69  Aligned_cols=80  Identities=14%  Similarity=0.146  Sum_probs=51.3

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhh---cc-CCCCeEE-----EECCCCChhHHHHHhc
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELIN---YN-EEKKLKV-----FQADPFDYHSLVNALK   97 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~---~~-~~~~v~~-----~~~Dl~~~~~~~~~~~   97 (294)
                      ++|.|+|+ |.+|+.++..|++.|++|++++++++..+.+.+.+..   .. ....+.-     ....+.-..++.+.++
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~   80 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAAVA   80 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHhhc
Confidence            68999998 9999999999999999999999988766554331100   00 0000000     0000111124566788


Q ss_pred             cCCEEEecCC
Q 043792           98 GCSGLFYSFE  107 (294)
Q Consensus        98 ~~d~Vih~a~  107 (294)
                      ++|+||-+..
T Consensus        81 ~aD~Vi~avp   90 (288)
T PRK09260         81 DADLVIEAVP   90 (288)
T ss_pred             CCCEEEEecc
Confidence            9999999876

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=97.06  E-value=0.0049  Score=54.98  Aligned_cols=70  Identities=11%  Similarity=0.052  Sum_probs=54.3

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCCEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCSGL  102 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~V  102 (294)
                      .+|+|+|+|+ |.+|+.++..+.+.|++|++++.++........          -.++..|..|.+.+.++++  ++|.|
T Consensus        11 ~~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~a----------d~~~~~~~~d~~~l~~~~~~~~id~v   79 (395)
T PRK09288         11 SATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA----------HRSHVIDMLDGDALRAVIEREKPDYI   79 (395)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchHHhh----------hheEECCCCCHHHHHHHHHHhCCCEE
Confidence            5679999997 789999999999999999999987654222111          1256678888888888887  78988


Q ss_pred             Eec
Q 043792          103 FYS  105 (294)
Q Consensus       103 ih~  105 (294)
                      +-.
T Consensus        80 i~~   82 (395)
T PRK09288         80 VPE   82 (395)
T ss_pred             EEe
Confidence            865

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=97.05  E-value=0.0013  Score=55.98  Aligned_cols=81  Identities=17%  Similarity=0.147  Sum_probs=51.1

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHh----hccCCCCeEEE------ECCCCChhHHHHH
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELI----NYNEEKKLKVF------QADPFDYHSLVNA   95 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~----~~~~~~~v~~~------~~Dl~~~~~~~~~   95 (294)
                      .++|.|+|+ |.+|+.++..|++.|++|++++++++..+...+.+.    .......+...      ...+.-..++.++
T Consensus         3 ~~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~a   81 (287)
T PRK08293          3 IKNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLTTDLAEA   81 (287)
T ss_pred             ccEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEeCCHHHH
Confidence            468999997 999999999999999999999998765444332100    00000000000      0011111346667


Q ss_pred             hccCCEEEecCC
Q 043792           96 LKGCSGLFYSFE  107 (294)
Q Consensus        96 ~~~~d~Vih~a~  107 (294)
                      ++++|.||-+..
T Consensus        82 ~~~aDlVieavp   93 (287)
T PRK08293         82 VKDADLVIEAVP   93 (287)
T ss_pred             hcCCCEEEEecc
Confidence            889999999876

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.05  E-value=0.0042  Score=52.74  Aligned_cols=79  Identities=18%  Similarity=0.178  Sum_probs=50.6

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCC---ChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccC
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHG---KLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGC   99 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~---~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~   99 (294)
                      ..+++++|.|+ |..++.++..|...|. +|+++.|+.+   +.+.+.+.+.. .....+.+  .++.+...+.+.+.++
T Consensus       122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~-~~~~~~~~--~~~~~~~~l~~~~~~a  197 (288)
T PRK12749        122 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNE-NTDCVVTV--TDLADQQAFAEALASA  197 (288)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhh-ccCceEEE--echhhhhhhhhhcccC
Confidence            35679999998 6669999999999984 7999999854   55555542210 00011222  2232223355566788


Q ss_pred             CEEEecC
Q 043792          100 SGLFYSF  106 (294)
Q Consensus       100 d~Vih~a  106 (294)
                      |+|||+-
T Consensus       198 DivINaT  204 (288)
T PRK12749        198 DILTNGT  204 (288)
T ss_pred             CEEEECC
Confidence            9999983

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=97.05  E-value=0.087  Score=40.05  Aligned_cols=184  Identities=13%  Similarity=0.103  Sum_probs=101.1

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeE-EEECCCC---ChhHH----HHHhc-
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLK-VFQADPF---DYHSL----VNALK-   97 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~-~~~~Dl~---~~~~~----~~~~~-   97 (294)
                      .+|+|-||-|-+|+.+++.+.+++|-|.-++-.+...             .... ++.+|-.   +.+++    -+.+. 
T Consensus         4 grVivYGGkGALGSacv~~FkannywV~siDl~eNe~-------------Ad~sI~V~~~~swtEQe~~v~~~vg~sL~g   70 (236)
T KOG4022|consen    4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ-------------ADSSILVDGNKSWTEQEQSVLEQVGSSLQG   70 (236)
T ss_pred             ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc-------------ccceEEecCCcchhHHHHHHHHHHHHhhcc
Confidence            5899999999999999999999999998887654321             1222 2233321   12222    22232 


Q ss_pred             -cCCEEEecCCCCCCCC-cchhhhHhHhhHHHHHHHH-----H-HHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS-TYDELTAEVETMAAHNVLE-----A-CAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDER  169 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~-~~~~~~~~~n~~~~~~ll~-----~-~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~  169 (294)
                       ++|.||..|+...... +..+...+.+++.-+.+..     . +.++-+..-++-+....+...+..+    -      
T Consensus        71 ekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~gTPg----M------  140 (236)
T KOG4022|consen   71 EKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGGTPG----M------  140 (236)
T ss_pred             cccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCCCCc----c------
Confidence             5799999987644332 2222112222222222221     1 1111011234444433322222222    1      


Q ss_pred             CCCChhhhhhccchhHhhHHHHHHHHHHHHHhc-CCe----EEEEecCceeCCCCCCCCccccccccccCCCccc-cccH
Q 043792          170 NWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR-GIS----MVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMA-SVDL  243 (294)
Q Consensus       170 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~----~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~-~v~v  243 (294)
                                  -.||..|.+..++.+.++.+. |++    .+.+-|-..-.|..   .       .-.++..+. |...
T Consensus       141 ------------IGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMN---R-------KwMP~ADfssWTPL  198 (236)
T KOG4022|consen  141 ------------IGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMN---R-------KWMPNADFSSWTPL  198 (236)
T ss_pred             ------------cchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccc---c-------ccCCCCcccCcccH
Confidence                        569999999999999987664 333    34444444433331   1       122344343 8888


Q ss_pred             HHHHHHHHhhhc
Q 043792          244 RFYVDAHICVFE  255 (294)
Q Consensus       244 ~D~a~~i~~~~~  255 (294)
                      ..+++-++.-..
T Consensus       199 ~fi~e~flkWtt  210 (236)
T KOG4022|consen  199 SFISEHFLKWTT  210 (236)
T ss_pred             HHHHHHHHHHhc
Confidence            999998887664

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.05  E-value=0.0024  Score=54.16  Aligned_cols=76  Identities=17%  Similarity=0.011  Sum_probs=53.0

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      .+++++|.|+ |..|+.++..|.+.|. +|+++.|+.++.+.+.+.+   .....+  ..  +...+++...+.++|+||
T Consensus       124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~---~~~~~~--~~--~~~~~~~~~~~~~~DiVI  195 (282)
T TIGR01809       124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLG---VQVGVI--TR--LEGDSGGLAIEKAAEVLV  195 (282)
T ss_pred             CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHh---hhcCcc--ee--ccchhhhhhcccCCCEEE
Confidence            4679999998 8889999999999995 7999999988887776632   111111  11  111133445567899999


Q ss_pred             ecCCC
Q 043792          104 YSFEP  108 (294)
Q Consensus       104 h~a~~  108 (294)
                      ++-..
T Consensus       196 naTp~  200 (282)
T TIGR01809       196 STVPA  200 (282)
T ss_pred             ECCCC
Confidence            99554

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=97.04  E-value=0.0013  Score=57.02  Aligned_cols=81  Identities=17%  Similarity=0.150  Sum_probs=50.8

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEec
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYS  105 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~  105 (294)
                      ||+|.|+|+ |.+|+.++..|++.|++|.+++|+++..+.+............... ...+.-..+..+.++++|+||-+
T Consensus         1 mmkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~vi~~   78 (325)
T PRK00094          1 MMKIAVLGA-GSWGTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKL-PDNLRATTDLAEALADADLILVA   78 (325)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcC-CCCeEEeCCHHHHHhCCCEEEEe
Confidence            478999997 9999999999999999999999987665555441000000000000 00111112344566789999888


Q ss_pred             CCC
Q 043792          106 FEP  108 (294)
Q Consensus       106 a~~  108 (294)
                      ...
T Consensus        79 v~~   81 (325)
T PRK00094         79 VPS   81 (325)
T ss_pred             CCH
Confidence            763

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.04  E-value=0.0021  Score=57.33  Aligned_cols=75  Identities=16%  Similarity=0.137  Sum_probs=57.2

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ..+++|+|.|+ |.+|+.+++.|.+.| .+++++.|+.++...+.+++   .   ..     .....+++.+.+.++|+|
T Consensus       179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~---~---~~-----~~~~~~~l~~~l~~aDiV  246 (414)
T PRK13940        179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF---R---NA-----SAHYLSELPQLIKKADII  246 (414)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh---c---CC-----eEecHHHHHHHhccCCEE
Confidence            45789999998 999999999999999 57999999887777776621   0   11     122335677788899999


Q ss_pred             EecCCCCC
Q 043792          103 FYSFEPPS  110 (294)
Q Consensus       103 ih~a~~~~  110 (294)
                      |++-+.+.
T Consensus       247 I~aT~a~~  254 (414)
T PRK13940        247 IAAVNVLE  254 (414)
T ss_pred             EECcCCCC
Confidence            99977655

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.04  E-value=0.0056  Score=55.89  Aligned_cols=104  Identities=13%  Similarity=0.046  Sum_probs=68.1

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCC--------------h
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFD--------------Y   89 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~--------------~   89 (294)
                      ....+|+|+|+ |-+|...+..+...|.+|+++++++++.+..++   .     +.+++..|..+              .
T Consensus       163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes---l-----GA~~v~i~~~e~~~~~~gya~~~s~~  233 (509)
T PRK09424        163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES---M-----GAEFLELDFEEEGGSGDGYAKVMSEE  233 (509)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---c-----CCeEEEeccccccccccchhhhcchh
Confidence            35789999998 999999999999999999999998877666555   3     44544333321              1


Q ss_pred             --hH----HHHHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecC
Q 043792           90 --HS----LVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSS  148 (294)
Q Consensus        90 --~~----~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss  148 (294)
                        +.    +.+..+++|+||.+++.+.....   .      .-+...++.+++.   ..+|.++.
T Consensus       234 ~~~~~~~~~~~~~~gaDVVIetag~pg~~aP---~------lit~~~v~~mkpG---gvIVdvg~  286 (509)
T PRK09424        234 FIKAEMALFAEQAKEVDIIITTALIPGKPAP---K------LITAEMVASMKPG---SVIVDLAA  286 (509)
T ss_pred             HHHHHHHHHHhccCCCCEEEECCCCCcccCc---c------hHHHHHHHhcCCC---CEEEEEcc
Confidence              11    12223468999999987552111   0      1134455555544   46888775

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=97.03  E-value=0.0018  Score=55.70  Aligned_cols=74  Identities=18%  Similarity=0.221  Sum_probs=55.6

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ..+++|+|+|+ |-+|..+++.|...| .+|++++|++++...+..++       +...     .+.+++.+.+.++|+|
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~-------g~~~-----~~~~~~~~~l~~aDvV  242 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL-------GGNA-----VPLDELLELLNEADVV  242 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc-------CCeE-----EeHHHHHHHHhcCCEE
Confidence            45789999998 999999999999876 78999999887766665521       1122     2334577778889999


Q ss_pred             EecCCCCC
Q 043792          103 FYSFEPPS  110 (294)
Q Consensus       103 ih~a~~~~  110 (294)
                      |.+.+...
T Consensus       243 i~at~~~~  250 (311)
T cd05213         243 ISATGAPH  250 (311)
T ss_pred             EECCCCCc
Confidence            99988655

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit

Probab=97.02  E-value=0.067  Score=45.29  Aligned_cols=91  Identities=14%  Similarity=0.124  Sum_probs=59.4

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc--CCEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG--CSGL  102 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~V  102 (294)
                      .+.+|+|-|.||.+|+.+.+.|..-|++++. .-++.+..            ..+    ..+.-..++.++-+.  +|.+
T Consensus         5 ~~~~~~~~g~~~~~~~~~~~~~~~~g~~~v~-~V~p~~~~------------~~v----~G~~~y~sv~dlp~~~~~Dla   67 (286)
T TIGR01019         5 KDTKVIVQGITGSQGSFHTEQMLAYGTNIVG-GVTPGKGG------------TTV----LGLPVFDSVKEAVEETGANAS   67 (286)
T ss_pred             CCCcEEEecCCcHHHHHHHHHHHhCCCCEEE-EECCCCCc------------cee----cCeeccCCHHHHhhccCCCEE
Confidence            3578999999999999999999999988444 33332100            011    122223344555444  7888


Q ss_pred             EecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792          103 FYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus       103 ih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      +-+....                ....+++.|.+. +++.+|.+|+.
T Consensus        68 vi~vpa~----------------~v~~~l~e~~~~-Gvk~avIis~G   97 (286)
T TIGR01019        68 VIFVPAP----------------FAADAIFEAIDA-GIELIVCITEG   97 (286)
T ss_pred             EEecCHH----------------HHHHHHHHHHHC-CCCEEEEECCC
Confidence            8876632                244577777777 99988888763

ATP citrate lyases appear to form an outgroup.

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=97.00  E-value=0.0063  Score=52.07  Aligned_cols=68  Identities=16%  Similarity=0.259  Sum_probs=49.1

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEecC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSF  106 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~a  106 (294)
                      |+|.|+|. |.+|..+++.|.+.|++|.+.+|++++.+.+.+   .     +...    ..+.+++.+.+.++|+||-+.
T Consensus         1 M~Ig~IGl-G~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~---~-----g~~~----~~s~~~~~~~~~~~dvIi~~v   67 (298)
T TIGR00872         1 MQLGLIGL-GRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKE---D-----RTTG----VANLRELSQRLSAPRVVWVMV   67 (298)
T ss_pred             CEEEEEcc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---c-----CCcc----cCCHHHHHhhcCCCCEEEEEc
Confidence            47999996 999999999999999999999998876665544   1     1111    134445555556678877775


Q ss_pred             C
Q 043792          107 E  107 (294)
Q Consensus       107 ~  107 (294)
                      .
T Consensus        68 p   68 (298)
T TIGR00872        68 P   68 (298)
T ss_pred             C
Confidence            4

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PRK07574 formate dehydrogenase; Provisional

Probab=97.00  E-value=0.0052  Score=54.23  Aligned_cols=71  Identities=18%  Similarity=0.096  Sum_probs=51.8

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ...+|+|.|.|. |-||+.+++.|...|.+|++.+|...+.+....   .     ++.       -..++.++++++|+|
T Consensus       189 ~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~---~-----g~~-------~~~~l~ell~~aDvV  252 (385)
T PRK07574        189 DLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQE---L-----GLT-------YHVSFDSLVSVCDVV  252 (385)
T ss_pred             ecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhhHhh---c-----Cce-------ecCCHHHHhhcCCEE
Confidence            356789999997 999999999999999999999987633221111   1     221       123577888999999


Q ss_pred             EecCCCC
Q 043792          103 FYSFEPP  109 (294)
Q Consensus       103 ih~a~~~  109 (294)
                      +.+....
T Consensus       253 ~l~lPlt  259 (385)
T PRK07574        253 TIHCPLH  259 (385)
T ss_pred             EEcCCCC
Confidence            8876643

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.00  E-value=0.0038  Score=54.35  Aligned_cols=98  Identities=16%  Similarity=0.127  Sum_probs=62.3

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCCh----hHHHHHh-cc
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDY----HSLVNAL-KG   98 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~----~~~~~~~-~~   98 (294)
                      ..+.+|+|+||+|.+|..+++.+...|.+|++++++.++.+.+.+.+       +++.+ .|..+.    +.+.+.. .+
T Consensus       150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l-------Ga~~v-i~~~~~~~~~~~i~~~~~~g  221 (338)
T cd08295         150 KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL-------GFDDA-FNYKEEPDLDAALKRYFPNG  221 (338)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc-------CCcee-EEcCCcccHHHHHHHhCCCC
Confidence            45789999999999999999999999999999888876655544311       22211 121111    2222222 35


Q ss_pred             CCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecC
Q 043792           99 CSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSS  148 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss  148 (294)
                      +|.||++.+..                .....++.++..   .+++.++.
T Consensus       222 vd~v~d~~g~~----------------~~~~~~~~l~~~---G~iv~~G~  252 (338)
T cd08295         222 IDIYFDNVGGK----------------MLDAVLLNMNLH---GRIAACGM  252 (338)
T ss_pred             cEEEEECCCHH----------------HHHHHHHHhccC---cEEEEecc
Confidence            89999987731                123455555544   47887664

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=97.00  E-value=0.0015  Score=55.53  Aligned_cols=40  Identities=18%  Similarity=0.155  Sum_probs=35.5

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhh
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQC   65 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~   65 (294)
                      .+++|.|+|+ |.+|+.++..|+..|++|++++++++..+.
T Consensus         4 ~~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~   43 (286)
T PRK07819          4 AIQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATA   43 (286)
T ss_pred             CccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence            3468999998 999999999999999999999999876544

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.00  E-value=0.0045  Score=53.65  Aligned_cols=98  Identities=20%  Similarity=0.157  Sum_probs=63.0

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCCh---hHHHHHhc--cC
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDY---HSLVNALK--GC   99 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~---~~~~~~~~--~~   99 (294)
                      .+.+|||+||+|.+|+..+..+...|+.+++.+.+.++.+.+.+   .     +.+.+. |..+.   +.++++..  ++
T Consensus       142 ~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~---l-----GAd~vi-~y~~~~~~~~v~~~t~g~gv  212 (326)
T COG0604         142 PGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKE---L-----GADHVI-NYREEDFVEQVRELTGGKGV  212 (326)
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHh---c-----CCCEEE-cCCcccHHHHHHHHcCCCCc
Confidence            47899999999999999999999999777777776655554443   2     222111 22222   23334443  58


Q ss_pred             CEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcc
Q 043792          100 SGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLT  150 (294)
Q Consensus       100 d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~  150 (294)
                      |+|+...+...                ....++++++.   .+++.++..+
T Consensus       213 Dvv~D~vG~~~----------------~~~~l~~l~~~---G~lv~ig~~~  244 (326)
T COG0604         213 DVVLDTVGGDT----------------FAASLAALAPG---GRLVSIGALS  244 (326)
T ss_pred             eEEEECCCHHH----------------HHHHHHHhccC---CEEEEEecCC
Confidence            99999988532                22344554444   4788776653

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=96.99  E-value=0.0055  Score=53.47  Aligned_cols=33  Identities=18%  Similarity=0.313  Sum_probs=28.2

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRG-YTVHAALHN   59 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~   59 (294)
                      +||.|+|++|++|++|++.|.+++ .++..+.++
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~   34 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVAS   34 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEC
Confidence            589999999999999999998876 688887543

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=96.98  E-value=0.00098  Score=51.30  Aligned_cols=78  Identities=19%  Similarity=0.172  Sum_probs=49.4

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEecCC
Q 043792           28 TVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSFE  107 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~a~  107 (294)
                      ||.|.|| |-.|..++..|..+|++|+...|+++..+.+...-......++...- ..+.-..+++++++++|+||-+..
T Consensus         1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~-~~i~~t~dl~~a~~~ad~IiiavP   78 (157)
T PF01210_consen    1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLP-ENIKATTDLEEALEDADIIIIAVP   78 (157)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEE-TTEEEESSHHHHHTT-SEEEE-S-
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccC-cccccccCHHHHhCcccEEEeccc
Confidence            6899998 88899999999999999999999886666555521100001111111 111112346778899998886654

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=96.98  E-value=0.0037  Score=53.76  Aligned_cols=68  Identities=18%  Similarity=0.134  Sum_probs=54.7

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      +++|.|+|| |.+|+-++..-...|++|++++-+++.....-          --.++..+.+|.+.++++.+.||+|=.
T Consensus         1 ~~tvgIlGG-GQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~v----------a~~~i~~~~dD~~al~ela~~~DViT~   68 (375)
T COG0026           1 MKTVGILGG-GQLGRMMALAAARLGIKVIVLDPDADAPAAQV----------ADRVIVAAYDDPEALRELAAKCDVITY   68 (375)
T ss_pred             CCeEEEEcC-cHHHHHHHHHHHhcCCEEEEecCCCCCchhhc----------ccceeecCCCCHHHHHHHHhhCCEEEE
Confidence            478999998 99999999999999999999997665432211          125677788899999999999998843

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.95  E-value=0.028  Score=48.18  Aligned_cols=105  Identities=21%  Similarity=0.330  Sum_probs=63.1

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChh-------------------hHHHHHhhccCCCCeEEEECCCC
Q 043792           28 TVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQ-------------------CIEEELINYNEEKKLKVFQADPF   87 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-------------------~l~~~~~~~~~~~~v~~~~~Dl~   87 (294)
                      ||||.|+ |.+|.++++.|+..|. ++++++.+.-...                   ...+.++.....-+++.+..++.
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~   79 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK   79 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence            6899997 9999999999999984 5666665422111                   11111111112234556667776


Q ss_pred             ChhHHHHHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcc
Q 043792           88 DYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLT  150 (294)
Q Consensus        88 ~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~  150 (294)
                      +.....++++++|+||.+.-..               ..-..+-+.|... ++ .||..++.+
T Consensus        80 ~~~~~~~f~~~~DvVv~a~Dn~---------------~ar~~in~~c~~~-~i-p~I~~gt~G  125 (312)
T cd01489          80 DPDFNVEFFKQFDLVFNALDNL---------------AARRHVNKMCLAA-DV-PLIESGTTG  125 (312)
T ss_pred             CccchHHHHhcCCEEEECCCCH---------------HHHHHHHHHHHHC-CC-CEEEEecCc
Confidence            6444456788999999886522               2223344555666 54 477666554

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=96.92  E-value=0.0029  Score=55.89  Aligned_cols=36  Identities=19%  Similarity=0.426  Sum_probs=32.8

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNH   60 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   60 (294)
                      .+++|.|+||.|.+|..+++.|.+.|++|++++|+.
T Consensus        97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~  132 (374)
T PRK11199         97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDD  132 (374)
T ss_pred             ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence            458999999999999999999999999999998753

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.91  E-value=0.005  Score=52.01  Aligned_cols=57  Identities=19%  Similarity=0.116  Sum_probs=45.4

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ...+++|+|.|++|.+|+.++..|+++|.+|+++.|+.   .                          ++.+.++++|+|
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t---~--------------------------~L~~~~~~aDIv  206 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT---Q--------------------------NLPELVKQADII  206 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc---h--------------------------hHHHHhccCCEE
Confidence            45789999999999999999999999999998877632   1                          233445778999


Q ss_pred             EecCCC
Q 043792          103 FYSFEP  108 (294)
Q Consensus       103 ih~a~~  108 (294)
                      |++.+.
T Consensus       207 I~AtG~  212 (283)
T PRK14192        207 VGAVGK  212 (283)
T ss_pred             EEccCC
Confidence            998863

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=96.91  E-value=0.0028  Score=54.16  Aligned_cols=41  Identities=15%  Similarity=0.289  Sum_probs=35.6

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHH
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEE   68 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~   68 (294)
                      ++|.|+|. |.+|..+++.|++.|++|++++|++++.+.+.+
T Consensus         2 ~~Ig~IGl-G~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~   42 (296)
T PRK15461          2 AAIAFIGL-GQMGSPMASNLLKQGHQLQVFDVNPQAVDALVD   42 (296)
T ss_pred             CeEEEEee-CHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH
Confidence            58999996 999999999999999999999998876655544

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=96.90  E-value=0.0033  Score=55.78  Aligned_cols=80  Identities=6%  Similarity=-0.034  Sum_probs=49.0

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEE----EECCCCChhHHHHHhccCCEE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKV----FQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~----~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      |+|.|.|. |++|..++..|. .|++|+++++++++.+.+.+.... ...+.+.-    ..+.++...+..++..++|+|
T Consensus         1 mkI~VIGl-GyvGl~~A~~lA-~G~~VigvD~d~~kv~~l~~g~~~-~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~v   77 (388)
T PRK15057          1 MKITISGT-GYVGLSNGLLIA-QNHEVVALDILPSRVAMLNDRISP-IVDKEIQQFLQSDKIHFNATLDKNEAYRDADYV   77 (388)
T ss_pred             CEEEEECC-CHHHHHHHHHHH-hCCcEEEEECCHHHHHHHHcCCCC-CCCcCHHHHHHhCCCcEEEecchhhhhcCCCEE
Confidence            47999986 999999997665 599999999998877666541000 00000000    001111112234456789999


Q ss_pred             EecCCCC
Q 043792          103 FYSFEPP  109 (294)
Q Consensus       103 ih~a~~~  109 (294)
                      |-+...+
T Consensus        78 ii~Vpt~   84 (388)
T PRK15057         78 IIATPTD   84 (388)
T ss_pred             EEeCCCC
Confidence            9997755

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.89  E-value=0.0034  Score=56.46  Aligned_cols=74  Identities=20%  Similarity=0.231  Sum_probs=55.2

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ..+++|+|+|+ |-+|+.+++.|...|. +|++++|+.++...+...  +     +.     +..+.+++.+.+.++|+|
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~--~-----g~-----~~~~~~~~~~~l~~aDvV  246 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEE--F-----GG-----EAIPLDELPEALAEADIV  246 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH--c-----CC-----cEeeHHHHHHHhccCCEE
Confidence            45689999997 9999999999999996 799999987666655542  1     11     222335566778899999


Q ss_pred             EecCCCCC
Q 043792          103 FYSFEPPS  110 (294)
Q Consensus       103 ih~a~~~~  110 (294)
                      |.+.+...
T Consensus       247 I~aT~s~~  254 (423)
T PRK00045        247 ISSTGAPH  254 (423)
T ss_pred             EECCCCCC
Confidence            99976544

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=96.89  E-value=0.0079  Score=50.66  Aligned_cols=72  Identities=13%  Similarity=0.039  Sum_probs=46.9

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHC--CCeEEEE-ecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLR--GYTVHAA-LHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGC   99 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~-~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~   99 (294)
                      ++++++|.|.|. |.||+.+++.|.+.  ++++.++ +|++++.+.+...  .     +...   -..   ++.+++.++
T Consensus         3 ~m~~irIGIIG~-G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~--~-----g~~~---~~~---~~eell~~~   68 (271)
T PRK13302          3 SRPELRVAIAGL-GAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWG--L-----RRPP---PVV---PLDQLATHA   68 (271)
T ss_pred             CCCeeEEEEECc-cHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHh--c-----CCCc---ccC---CHHHHhcCC
Confidence            445689999996 99999999999873  7887755 5555544444331  0     1000   112   344456789


Q ss_pred             CEEEecCCC
Q 043792          100 SGLFYSFEP  108 (294)
Q Consensus       100 d~Vih~a~~  108 (294)
                      |+|+-|+..
T Consensus        69 D~Vvi~tp~   77 (271)
T PRK13302         69 DIVVEAAPA   77 (271)
T ss_pred             CEEEECCCc
Confidence            999999774

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.89  E-value=0.013  Score=50.78  Aligned_cols=95  Identities=14%  Similarity=0.186  Sum_probs=55.9

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHH-CCCe---EEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccC
Q 043792           24 NATKTVCVMDASGHFASALVRRLLL-RGYT---VHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGC   99 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~-~g~~---V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~   99 (294)
                      .+.++|.|.||||++|+.+++.|.+ ..++   +..+....+.-+.+ .   +.  ...+.+...|   ++.    ++++
T Consensus         3 ~~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~-~---~~--~~~l~v~~~~---~~~----~~~~   69 (347)
T PRK06728          3 EKGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTV-Q---FK--GREIIIQEAK---INS----FEGV   69 (347)
T ss_pred             CCCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCe-e---eC--CcceEEEeCC---HHH----hcCC
Confidence            3457999999999999999999995 5666   55555433222211 1   11  1123333332   232    3678


Q ss_pred             CEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792          100 SGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus       100 d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      |+||-+++..                .+..+...+.+. |+ .+|=.||.
T Consensus        70 Divf~a~~~~----------------~s~~~~~~~~~~-G~-~VID~Ss~  101 (347)
T PRK06728         70 DIAFFSAGGE----------------VSRQFVNQAVSS-GA-IVIDNTSE  101 (347)
T ss_pred             CEEEECCChH----------------HHHHHHHHHHHC-CC-EEEECchh
Confidence            9999887532                133445555555 54 57767765

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.88  E-value=0.029  Score=46.08  Aligned_cols=105  Identities=14%  Similarity=0.144  Sum_probs=61.7

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhh-------------------HHHHHhhccCCCCeEEEECCCC
Q 043792           28 TVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQC-------------------IEEELINYNEEKKLKVFQADPF   87 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~-------------------l~~~~~~~~~~~~v~~~~~Dl~   87 (294)
                      ||+|.|+ |.+|..+++.|...|. ++++++.+.-....                   ..+.++.....-+++.+..++.
T Consensus         1 kVlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~   79 (234)
T cd01484           1 KVLLVGA-GGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG   79 (234)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            5899997 8999999999999984 46666654211111                   1111111111224556667775


Q ss_pred             ChhHH-HHHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcc
Q 043792           88 DYHSL-VNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLT  150 (294)
Q Consensus        88 ~~~~~-~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~  150 (294)
                      +.+.+ .++++++|+||.+.-.               ...-..+-+.|... ++ .+|..++.+
T Consensus        80 ~~~~~~~~f~~~~DvVi~a~Dn---------------~~aR~~ln~~c~~~-~i-plI~~g~~G  126 (234)
T cd01484          80 PEQDFNDTFFEQFHIIVNALDN---------------IIARRYVNGMLIFL-IV-PLIESGTEG  126 (234)
T ss_pred             hhhhchHHHHhCCCEEEECCCC---------------HHHHHHHHHHHHHc-CC-CEEEEcccC
Confidence            54433 4567889999987542               22233455556666 54 577766644

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.86  E-value=0.0049  Score=52.16  Aligned_cols=78  Identities=15%  Similarity=0.235  Sum_probs=51.9

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ..+++++|.|+ |..|++++-.|.+.|. +|+++.|+.++.+.+.+.+..  ..........+   ...+.+.+.++|.|
T Consensus       125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~--~~~~~~~~~~~---~~~~~~~~~~~div  198 (283)
T PRK14027        125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINN--AVGREAVVGVD---ARGIEDVIAAADGV  198 (283)
T ss_pred             cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhh--ccCcceEEecC---HhHHHHHHhhcCEE
Confidence            34689999998 8899999999999985 789999988887777663210  00110111122   22233345678999


Q ss_pred             EecCC
Q 043792          103 FYSFE  107 (294)
Q Consensus       103 ih~a~  107 (294)
                      ||+-.
T Consensus       199 INaTp  203 (283)
T PRK14027        199 VNATP  203 (283)
T ss_pred             EEcCC
Confidence            99843

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.86  E-value=0.0035  Score=55.33  Aligned_cols=75  Identities=21%  Similarity=0.292  Sum_probs=62.1

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~  101 (294)
                      +...++|||+|| |-+|.-+++.|.++| .+|+++.|..++...+...+         .   +.....+++...+.++|+
T Consensus       175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~---------~---~~~~~l~el~~~l~~~Dv  241 (414)
T COG0373         175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKL---------G---AEAVALEELLEALAEADV  241 (414)
T ss_pred             ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHh---------C---CeeecHHHHHHhhhhCCE
Confidence            356789999998 999999999999999 78999999998888887732         1   455566778889999999


Q ss_pred             EEecCCCCC
Q 043792          102 LFYSFEPPS  110 (294)
Q Consensus       102 Vih~a~~~~  110 (294)
                      ||-+-+.+.
T Consensus       242 VissTsa~~  250 (414)
T COG0373         242 VISSTSAPH  250 (414)
T ss_pred             EEEecCCCc
Confidence            999966555

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.86  E-value=0.029  Score=49.94  Aligned_cols=105  Identities=13%  Similarity=0.052  Sum_probs=63.7

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCCh-------------------hhHHHHHhhccCCCC--eEEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKL-------------------QCIEEELINYNEEKK--LKVF   82 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-------------------~~l~~~~~~~~~~~~--v~~~   82 (294)
                      +..+|+|.|+ |.+|+++++.|...|. ++++++.+.-..                   +...+.+  ...++.  ++.+
T Consensus        41 ~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l--~~~np~v~i~~~  117 (392)
T PRK07878         41 KNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSI--VEINPLVNVRLH  117 (392)
T ss_pred             hcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHH--HHhCCCcEEEEE
Confidence            4679999998 8899999999999985 466666532111                   1111111  112333  4445


Q ss_pred             ECCCCChhHHHHHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcc
Q 043792           83 QADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLT  150 (294)
Q Consensus        83 ~~Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~  150 (294)
                      ...++ .+...++++++|+||.+...               ...-..+-++|.+. ++ .+|+.+..+
T Consensus       118 ~~~i~-~~~~~~~~~~~D~Vvd~~d~---------------~~~r~~ln~~~~~~-~~-p~v~~~~~g  167 (392)
T PRK07878        118 EFRLD-PSNAVELFSQYDLILDGTDN---------------FATRYLVNDAAVLA-GK-PYVWGSIYR  167 (392)
T ss_pred             eccCC-hhHHHHHHhcCCEEEECCCC---------------HHHHHHHHHHHHHc-CC-CEEEEEecc
Confidence            55554 34567788899999988642               11222355666666 64 477766544

>PRK06849 hypothetical protein; Provisional

Probab=96.84  E-value=0.0081  Score=53.49  Aligned_cols=38  Identities=29%  Similarity=0.105  Sum_probs=34.3

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK   62 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   62 (294)
                      .+|+|||||++..+|.++++.|.+.|++|++++.++..
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~   40 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYP   40 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH
Confidence            36899999999999999999999999999999887644

>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]

Probab=96.84  E-value=0.016  Score=47.29  Aligned_cols=96  Identities=15%  Similarity=0.100  Sum_probs=65.8

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCCEEE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCSGLF  103 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~Vi  103 (294)
                      +++|+|.|||+= ++.|++.|...+..+++.+-... -..+..   .     ......+-..+.+.+.++++  ++|.||
T Consensus         2 ~~~ilvlGGT~D-ar~la~~L~~~~~~~~~ss~t~~-g~~l~~---~-----~~~~~~~G~l~~e~l~~~l~e~~i~llI   71 (257)
T COG2099           2 MMRILLLGGTSD-ARALAKKLAAAPVDIILSSLTGY-GAKLAE---Q-----IGPVRVGGFLGAEGLAAFLREEGIDLLI   71 (257)
T ss_pred             CceEEEEeccHH-HHHHHHHhhccCccEEEEEcccc-cccchh---c-----cCCeeecCcCCHHHHHHHHHHcCCCEEE
Confidence            578999999887 99999999999844444332221 111211   0     12255566678889999987  589999


Q ss_pred             ecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEE
Q 043792          104 YSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVF  145 (294)
Q Consensus       104 h~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~  145 (294)
                      ..--+.-             ...+.|.+++|+.. +++-+-|
T Consensus        72 DATHPyA-------------a~iS~Na~~aake~-gipy~r~   99 (257)
T COG2099          72 DATHPYA-------------ARISQNAARAAKET-GIPYLRL   99 (257)
T ss_pred             ECCChHH-------------HHHHHHHHHHHHHh-CCcEEEE
Confidence            8865532             35578899999988 8765544

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.83  E-value=0.0093  Score=45.82  Aligned_cols=68  Identities=15%  Similarity=0.044  Sum_probs=45.4

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      ..+++|+|.|| |-+|...++.|++.|++|++++  ++..+.+.+   .    ..+++....+...     -+++.|.||
T Consensus        11 l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs--p~~~~~l~~---l----~~i~~~~~~~~~~-----dl~~a~lVi   75 (157)
T PRK06719         11 LHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS--PEICKEMKE---L----PYITWKQKTFSND-----DIKDAHLIY   75 (157)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc--CccCHHHHh---c----cCcEEEecccChh-----cCCCceEEE
Confidence            46799999998 9999999999999999999884  333344433   1    2444444333221     145667766


Q ss_pred             ecC
Q 043792          104 YSF  106 (294)
Q Consensus       104 h~a  106 (294)
                      -+-
T Consensus        76 aaT   78 (157)
T PRK06719         76 AAT   78 (157)
T ss_pred             ECC
Confidence            643

>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain

Probab=96.82  E-value=0.18  Score=45.85  Aligned_cols=89  Identities=20%  Similarity=0.277  Sum_probs=59.3

Q ss_pred             CCCCeEEEeCCC---chHHHHHHHHHHHCCC--eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc
Q 043792           24 NATKTVCVMDAS---GHFASALVRRLLLRGY--TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG   98 (294)
Q Consensus        24 ~~~~~vlItGat---G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~   98 (294)
                      ...++|.|.|+|   |-+|..+++.|.+.|+  +|+.+..+.....             +       +.-..++.++-..
T Consensus         5 ~~p~siavvGaS~~~~~~g~~~~~~l~~~gf~g~v~~Vnp~~~~i~-------------G-------~~~~~sl~~lp~~   64 (447)
T TIGR02717         5 FNPKSVAVIGASRDPGKVGYAIMKNLIEGGYKGKIYPVNPKAGEIL-------------G-------VKAYPSVLEIPDP   64 (447)
T ss_pred             cCCCEEEEEccCCCCCchHHHHHHHHHhCCCCCcEEEECCCCCccC-------------C-------ccccCCHHHCCCC
Confidence            345789999998   6789999999999998  5776654432110             1       1112233444346


Q ss_pred             CCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792           99 CSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      +|.++-+....                ....+++.|.+. +++.+|.+|+.
T Consensus        65 ~Dlavi~vp~~----------------~~~~~l~e~~~~-gv~~~vi~s~g   98 (447)
T TIGR02717        65 VDLAVIVVPAK----------------YVPQVVEECGEK-GVKGAVVITAG   98 (447)
T ss_pred             CCEEEEecCHH----------------HHHHHHHHHHhc-CCCEEEEECCC
Confidence            78887665532                245678888888 99999888773

Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=96.81  E-value=0.0079  Score=51.46  Aligned_cols=83  Identities=14%  Similarity=0.122  Sum_probs=52.2

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      ++.+|.|.||||+.|..|++.|.++. .++..+..+...                      ++.+   ....+.++|+||
T Consensus         1 ~~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~----------------------~~~~---~~~~~~~~DvvF   55 (313)
T PRK11863          1 MKPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK----------------------DAAA---RRELLNAADVAI   55 (313)
T ss_pred             CCcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC----------------------cccC---chhhhcCCCEEE
Confidence            36799999999999999999999986 345544433211                      1111   123456789888


Q ss_pred             ecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcc
Q 043792          104 YSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLT  150 (294)
Q Consensus       104 h~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~  150 (294)
                      -+....                ....+...+.+. ++ ++|=+|+..
T Consensus        56 lalp~~----------------~s~~~~~~~~~~-g~-~VIDlSadf   84 (313)
T PRK11863         56 LCLPDD----------------AAREAVALIDNP-AT-RVIDASTAH   84 (313)
T ss_pred             ECCCHH----------------HHHHHHHHHHhC-CC-EEEECChhh
Confidence            876421                123344444445 64 688888753

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.81  E-value=0.003  Score=53.09  Aligned_cols=67  Identities=18%  Similarity=0.263  Sum_probs=47.0

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCC---CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRG---YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ||+|.|+|+ |.+|+.+++.|.+.|   ++|.+++|+++..+.+..   ..    ++..     .  .+..+.+.++|+|
T Consensus         2 mm~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~---~~----g~~~-----~--~~~~~~~~~advV   66 (267)
T PRK11880          2 MKKIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAE---EY----GVRA-----A--TDNQEAAQEADVV   66 (267)
T ss_pred             CCEEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHH---hc----CCee-----c--CChHHHHhcCCEE
Confidence            678999997 999999999999998   789999998766555444   10    1211     1  1233445678888


Q ss_pred             EecCC
Q 043792          103 FYSFE  107 (294)
Q Consensus       103 ih~a~  107 (294)
                      |-+.-
T Consensus        67 il~v~   71 (267)
T PRK11880         67 VLAVK   71 (267)
T ss_pred             EEEcC
Confidence            87653

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.81  E-value=0.0093  Score=51.29  Aligned_cols=70  Identities=14%  Similarity=0.176  Sum_probs=52.1

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ...+++|.|.|- |-||+.+++.|...|.+|++++|..+...             .+..+    ....++.++++++|+|
T Consensus       133 ~l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~~-------------~~~~~----~~~~~l~e~l~~aDvv  194 (312)
T PRK15469        133 HREDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSWP-------------GVQSF----AGREELSAFLSQTRVL  194 (312)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCCC-------------Cceee----cccccHHHHHhcCCEE
Confidence            346789999996 99999999999999999999988653211             11111    1235688899999999


Q ss_pred             EecCCCCC
Q 043792          103 FYSFEPPS  110 (294)
Q Consensus       103 ih~a~~~~  110 (294)
                      +.+.....
T Consensus       195 v~~lPlt~  202 (312)
T PRK15469        195 INLLPNTP  202 (312)
T ss_pred             EECCCCCH
Confidence            98866543

>PLN03139 formate dehydrogenase; Provisional

Probab=96.80  E-value=0.0097  Score=52.54  Aligned_cols=69  Identities=19%  Similarity=0.086  Sum_probs=50.5

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ...+++|.|.|. |-||+.+++.|...|.+|.+++|+..+.+....   .     ++.       -.+++.+++.++|+|
T Consensus       196 ~L~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~---~-----g~~-------~~~~l~ell~~sDvV  259 (386)
T PLN03139        196 DLEGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKE---T-----GAK-------FEEDLDAMLPKCDVV  259 (386)
T ss_pred             CCCCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCCCcchhhHhh---c-----Cce-------ecCCHHHHHhhCCEE
Confidence            456899999996 999999999999999999998887533222111   1     221       123577888899999


Q ss_pred             EecCC
Q 043792          103 FYSFE  107 (294)
Q Consensus       103 ih~a~  107 (294)
                      +.+..
T Consensus       260 ~l~lP  264 (386)
T PLN03139        260 VINTP  264 (386)
T ss_pred             EEeCC
Confidence            88754

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.79  E-value=0.0068  Score=52.23  Aligned_cols=82  Identities=12%  Similarity=0.093  Sum_probs=51.0

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhh-cc--CCCCeE-EEECCCCChhHHHHHhccCCE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELIN-YN--EEKKLK-VFQADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~-~~--~~~~v~-~~~~Dl~~~~~~~~~~~~~d~  101 (294)
                      .++|.|+|+ |.+|..++..|++.|++|++++++.+..+.+.+.+.. ..  ...... .....+.-..++.++++++|+
T Consensus         4 ~~~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~aDl   82 (311)
T PRK06130          4 IQNLAIIGA-GTMGSGIAALFARKGLQVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRMEAGLAAAVSGADL   82 (311)
T ss_pred             ccEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeCCHHHHhccCCE
Confidence            478999998 9999999999999999999999987665554431000 00  000000 000001111234556788999


Q ss_pred             EEecCCC
Q 043792          102 LFYSFEP  108 (294)
Q Consensus       102 Vih~a~~  108 (294)
                      ||-+...
T Consensus        83 Vi~av~~   89 (311)
T PRK06130         83 VIEAVPE   89 (311)
T ss_pred             EEEeccC
Confidence            9998754

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.79  E-value=0.0043  Score=55.69  Aligned_cols=74  Identities=16%  Similarity=0.189  Sum_probs=55.1

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ..+++|+|+|+ |.+|..+++.|...| .+|++++|+.++...+...  +     +...+     +.+++.+.+.++|+|
T Consensus       178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~--~-----g~~~i-----~~~~l~~~l~~aDvV  244 (417)
T TIGR01035       178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKE--L-----GGEAV-----KFEDLEEYLAEADIV  244 (417)
T ss_pred             ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH--c-----CCeEe-----eHHHHHHHHhhCCEE
Confidence            45689999997 999999999999999 7899999987665555441  1     11121     224677778899999


Q ss_pred             EecCCCCC
Q 043792          103 FYSFEPPS  110 (294)
Q Consensus       103 ih~a~~~~  110 (294)
                      |.+.+...
T Consensus       245 i~aT~s~~  252 (417)
T TIGR01035       245 ISSTGAPH  252 (417)
T ss_pred             EECCCCCC
Confidence            99966544

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK13243 glyoxylate reductase; Reviewed

Probab=96.78  E-value=0.0065  Score=52.79  Aligned_cols=69  Identities=16%  Similarity=0.103  Sum_probs=50.8

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ...+++|.|.|- |.||+.+++.|...|.+|++++|+..... ...   .     ++.        ..++.++++++|+|
T Consensus       147 ~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~-~~~---~-----~~~--------~~~l~ell~~aDiV  208 (333)
T PRK13243        147 DVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPEA-EKE---L-----GAE--------YRPLEELLRESDFV  208 (333)
T ss_pred             CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChhh-HHH---c-----CCE--------ecCHHHHHhhCCEE
Confidence            456899999997 99999999999999999999998754321 111   1     111        12477788899999


Q ss_pred             EecCCCC
Q 043792          103 FYSFEPP  109 (294)
Q Consensus       103 ih~a~~~  109 (294)
                      +.+....
T Consensus       209 ~l~lP~t  215 (333)
T PRK13243        209 SLHVPLT  215 (333)
T ss_pred             EEeCCCC
Confidence            8887543

>PLN00203 glutamyl-tRNA reductase

Probab=96.77  E-value=0.0038  Score=57.23  Aligned_cols=77  Identities=17%  Similarity=0.313  Sum_probs=55.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ...++|+|+|+ |-+|..+++.|...|. +|+++.|+.++.+.+..++      .++.+..   ...+++.+++.++|+|
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~------~g~~i~~---~~~~dl~~al~~aDVV  333 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF------PDVEIIY---KPLDEMLACAAEADVV  333 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh------CCCceEe---ecHhhHHHHHhcCCEE
Confidence            45689999998 9999999999999995 6999999987777766521      1222211   2224566778899999


Q ss_pred             EecCCCCC
Q 043792          103 FYSFEPPS  110 (294)
Q Consensus       103 ih~a~~~~  110 (294)
                      |.+-+...
T Consensus       334 IsAT~s~~  341 (519)
T PLN00203        334 FTSTSSET  341 (519)
T ss_pred             EEccCCCC
Confidence            98854433

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=96.77  E-value=0.0022  Score=49.94  Aligned_cols=76  Identities=12%  Similarity=-0.047  Sum_probs=50.7

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCC------------------
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADP------------------   86 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl------------------   86 (294)
                      +..+|+|+|+ |.+|...++.|...|.+|+.++.++.....+..   .     ....+..+.                  
T Consensus        19 ~p~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~---~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~   89 (168)
T PF01262_consen   19 PPAKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQLES---L-----GAYFIEVDYEDHLERKDFDKADYYEHP   89 (168)
T ss_dssp             -T-EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHH---T-----TTEESEETTTTTTTSB-CCHHHCHHHC
T ss_pred             CCeEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhc---c-----cCceEEEcccccccccccchhhhhHHH
Confidence            4589999996 999999999999999999999987655554444   2     233333331                  


Q ss_pred             -CChhHHHHHhccCCEEEecCCCC
Q 043792           87 -FDYHSLVNALKGCSGLFYSFEPP  109 (294)
Q Consensus        87 -~~~~~~~~~~~~~d~Vih~a~~~  109 (294)
                       .+...+.+.++.+|.||.++-.+
T Consensus        90 ~~~~~~f~~~i~~~d~vI~~~~~~  113 (168)
T PF01262_consen   90 ESYESNFAEFIAPADIVIGNGLYW  113 (168)
T ss_dssp             CHHHHHHHHHHHH-SEEEEHHHBT
T ss_pred             HHhHHHHHHHHhhCcEEeeecccC
Confidence             12235666667889999875443

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.75  E-value=0.0085  Score=50.45  Aligned_cols=59  Identities=15%  Similarity=0.177  Sum_probs=48.3

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ...+++|+|+|.++.+|+.++..|..+|.+|+++.++.                             .++.+.++++|+|
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t-----------------------------~~l~~~~~~ADIV  205 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS-----------------------------KDMASYLKDADVI  205 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc-----------------------------hhHHHHHhhCCEE
Confidence            46789999999999999999999999999999887542                             1355567788888


Q ss_pred             EecCCCCC
Q 043792          103 FYSFEPPS  110 (294)
Q Consensus       103 ih~a~~~~  110 (294)
                      |...+.+.
T Consensus       206 IsAvg~p~  213 (286)
T PRK14175        206 VSAVGKPG  213 (286)
T ss_pred             EECCCCCc
Confidence            88887654

>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]

Probab=96.75  E-value=0.0025  Score=54.92  Aligned_cols=73  Identities=15%  Similarity=0.143  Sum_probs=60.2

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChh-HHHHHhccCCEEE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYH-SLVNALKGCSGLF  103 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~-~~~~~~~~~d~Vi  103 (294)
                      +++||+.|+ ||+.+.++..|.+++ .+|++.+|...+.+.+..       +.+++.+..|+.+++ .++..++..|.|+
T Consensus         2 ~~~vlllgs-g~v~~p~~d~ls~~~dv~vtva~~~~~~~~~~~~-------~~~~~av~ldv~~~~~~L~~~v~~~D~vi   73 (445)
T KOG0172|consen    2 KKGVLLLGS-GFVSRPVADFLSRKKDVNVTVASRTLKDAEALVK-------GINIKAVSLDVADEELALRKEVKPLDLVI   73 (445)
T ss_pred             CcceEEecC-ccccchHHHHHhhcCCceEEEehhhHHHHHHHhc-------CCCccceEEEccchHHHHHhhhcccceee
Confidence            578999997 999999999999875 678888887766665543       235888999999988 8899999999999


Q ss_pred             ecC
Q 043792          104 YSF  106 (294)
Q Consensus       104 h~a  106 (294)
                      .+.
T Consensus        74 SLl   76 (445)
T KOG0172|consen   74 SLL   76 (445)
T ss_pred             eec
Confidence            883

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.74  E-value=0.0039  Score=52.47  Aligned_cols=44  Identities=18%  Similarity=0.203  Sum_probs=39.3

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCChhhHHH
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEE   68 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~   68 (294)
                      ..+++++|.|| |..++.++..|++.| .+|+++.|+.++.+.+.+
T Consensus       124 ~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~  168 (283)
T COG0169         124 VTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELAD  168 (283)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            34689999998 888999999999999 679999999988888877

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=96.74  E-value=0.017  Score=50.02  Aligned_cols=98  Identities=19%  Similarity=0.104  Sum_probs=63.3

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhH---HHHHhc--c
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHS---LVNALK--G   98 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~---~~~~~~--~   98 (294)
                      ..+.+|+|+|++|.+|..+++.+...|.+|++++++.+..+.+..   .     .... ..|..+.+.   +.....  +
T Consensus       165 ~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~---~-----~~~~-~~~~~~~~~~~~~~~~~~~~~  235 (342)
T cd08266         165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKE---L-----GADY-VIDYRKEDFVREVRELTGKRG  235 (342)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---c-----CCCe-EEecCChHHHHHHHHHhCCCC
Confidence            356799999999999999999999999999998887655444433   2     1111 124444332   222222  5


Q ss_pred             CCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792           99 CSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      +|.++++++...                ....++.+...   .+++.+++.
T Consensus       236 ~d~~i~~~g~~~----------------~~~~~~~l~~~---G~~v~~~~~  267 (342)
T cd08266         236 VDVVVEHVGAAT----------------WEKSLKSLARG---GRLVTCGAT  267 (342)
T ss_pred             CcEEEECCcHHH----------------HHHHHHHhhcC---CEEEEEecC
Confidence            799999987311                12334444433   478888765

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.74  E-value=0.013  Score=51.15  Aligned_cols=75  Identities=19%  Similarity=0.114  Sum_probs=49.7

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhhccCCCCeEE-EECCCCC-hhHHHHHh-ccCCEE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINYNEEKKLKV-FQADPFD-YHSLVNAL-KGCSGL  102 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~-~~~Dl~~-~~~~~~~~-~~~d~V  102 (294)
                      .+|||+||+|.+|..+++.+...|. +|+++++++++.+.+.++  +     +++. +..+-.+ .+.+.++. .++|+|
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~--l-----Ga~~vi~~~~~~~~~~i~~~~~~gvd~v  228 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSE--L-----GFDAAINYKTDNVAERLRELCPEGVDVY  228 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHh--c-----CCcEEEECCCCCHHHHHHHHCCCCceEE
Confidence            7999999999999999999988998 799988887665554431  1     2222 2211111 12233322 258999


Q ss_pred             EecCCC
Q 043792          103 FYSFEP  108 (294)
Q Consensus       103 ih~a~~  108 (294)
                      |++.+.
T Consensus       229 id~~g~  234 (345)
T cd08293         229 FDNVGG  234 (345)
T ss_pred             EECCCc
Confidence            998773

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.74  E-value=0.00084  Score=49.40  Aligned_cols=85  Identities=13%  Similarity=0.029  Sum_probs=45.5

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEE-ecCCCChhhHHHHHh------hccCCCCeEEEECCCCCh--hHHHHH
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAA-LHNHGKLQCIEEELI------NYNEEKKLKVFQADPFDY--HSLVNA   95 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~l~~~~~------~~~~~~~v~~~~~Dl~~~--~~~~~~   95 (294)
                      ..++|-|+|+ |-+|.+|.+.|.+.|++|..+ +|+....+.+...+.      ........+++..-+.|.  +.+.+.
T Consensus         9 ~~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDdaI~~va~~   87 (127)
T PF10727_consen    9 ARLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDDAIAEVAEQ   87 (127)
T ss_dssp             ---EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CCHHHHHHHH
T ss_pred             CccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechHHHHHHHHH
Confidence            3589999998 999999999999999999887 455544433322100      000112334444444443  223323


Q ss_pred             hc------cCCEEEecCCCCC
Q 043792           96 LK------GCSGLFYSFEPPS  110 (294)
Q Consensus        96 ~~------~~d~Vih~a~~~~  110 (294)
                      +.      .-..|+||.|...
T Consensus        88 La~~~~~~~g~iVvHtSGa~~  108 (127)
T PF10727_consen   88 LAQYGAWRPGQIVVHTSGALG  108 (127)
T ss_dssp             HHCC--S-TT-EEEES-SS--
T ss_pred             HHHhccCCCCcEEEECCCCCh
Confidence            32      2369999988654

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK07877 hypothetical protein; Provisional

Probab=96.73  E-value=0.025  Score=53.96  Aligned_cols=104  Identities=13%  Similarity=0.124  Sum_probs=66.3

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCC--eEEEEecCCCC---h---------------hhHHHHHhhccCCCCeEEEEC
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGY--TVHAALHNHGK---L---------------QCIEEELINYNEEKKLKVFQA   84 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~---~---------------~~l~~~~~~~~~~~~v~~~~~   84 (294)
                      +..+|+|.|+ | +|++++..|...|.  ++++++.+.-.   .               +..+..+......-+++.+..
T Consensus       106 ~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~~  183 (722)
T PRK07877        106 GRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFTD  183 (722)
T ss_pred             hcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEec
Confidence            4689999999 8 99999999999984  77777663211   1               111221111122234556666


Q ss_pred             CCCChhHHHHHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecC
Q 043792           85 DPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSS  148 (294)
Q Consensus        85 Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss  148 (294)
                      .++ .+.+.++++++|+||.|.-..               ..=..+-++|.+. ++ .+|+-++
T Consensus       184 ~i~-~~n~~~~l~~~DlVvD~~D~~---------------~~R~~ln~~a~~~-~i-P~i~~~~  229 (722)
T PRK07877        184 GLT-EDNVDAFLDGLDVVVEECDSL---------------DVKVLLREAARAR-RI-PVLMATS  229 (722)
T ss_pred             cCC-HHHHHHHhcCCCEEEECCCCH---------------HHHHHHHHHHHHc-CC-CEEEEcC
Confidence            664 678999999999999997632               1122344666666 65 4666554

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=96.73  E-value=0.0068  Score=55.70  Aligned_cols=82  Identities=20%  Similarity=0.148  Sum_probs=51.4

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhh----ccCCCCeEEE-ECCCCChhHHHHHhccCC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELIN----YNEEKKLKVF-QADPFDYHSLVNALKGCS  100 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~----~~~~~~v~~~-~~Dl~~~~~~~~~~~~~d  100 (294)
                      .|+|.|+|+ |.+|+.++..|+..|++|++++++++..+.+...+..    .......... .+.+.-..++.++++++|
T Consensus         4 i~kIavIG~-G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD   82 (495)
T PRK07531          4 IMKAACIGG-GVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGAD   82 (495)
T ss_pred             cCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCC
Confidence            368999987 9999999999999999999999987765543221000    0000000000 001111234667788999


Q ss_pred             EEEecCCC
Q 043792          101 GLFYSFEP  108 (294)
Q Consensus       101 ~Vih~a~~  108 (294)
                      +||-+...
T Consensus        83 ~Vieavpe   90 (495)
T PRK07531         83 WIQESVPE   90 (495)
T ss_pred             EEEEcCcC
Confidence            99987654

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.72  E-value=0.014  Score=46.84  Aligned_cols=72  Identities=15%  Similarity=0.082  Sum_probs=48.2

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      ..+++|+|+|| |-+|...++.|++.|++|+++++...  +.+.+   .. ....+.+..-++..     ..+.++|.||
T Consensus         8 l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~--~~l~~---l~-~~~~i~~~~~~~~~-----~~l~~adlVi   75 (202)
T PRK06718          8 LSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELT--ENLVK---LV-EEGKIRWKQKEFEP-----SDIVDAFLVI   75 (202)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCC--HHHHH---HH-hCCCEEEEecCCCh-----hhcCCceEEE
Confidence            45789999998 99999999999999999999876432  22222   11 11345555443322     2246778777


Q ss_pred             ecCC
Q 043792          104 YSFE  107 (294)
Q Consensus       104 h~a~  107 (294)
                      -+-.
T Consensus        76 aaT~   79 (202)
T PRK06718         76 AATN   79 (202)
T ss_pred             EcCC
Confidence            7644

>PLN02928 oxidoreductase family protein

Probab=96.71  E-value=0.0083  Score=52.42  Aligned_cols=82  Identities=11%  Similarity=-0.006  Sum_probs=53.4

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ...+++|.|.|- |-||+.+++.|...|.+|++++|+..+.....    .......+..+........++.++++++|+|
T Consensus       156 ~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~L~ell~~aDiV  230 (347)
T PLN02928        156 TLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEPEDG----LLIPNGDVDDLVDEKGGHEDIYEFAGEADIV  230 (347)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhhhhh----hccccccccccccccCcccCHHHHHhhCCEE
Confidence            456799999997 99999999999999999999988743211110    0000001111111111345788999999999


Q ss_pred             EecCCCC
Q 043792          103 FYSFEPP  109 (294)
Q Consensus       103 ih~a~~~  109 (294)
                      +.+....
T Consensus       231 vl~lPlt  237 (347)
T PLN02928        231 VLCCTLT  237 (347)
T ss_pred             EECCCCC
Confidence            9886643

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.71  E-value=0.0055  Score=52.69  Aligned_cols=72  Identities=18%  Similarity=0.115  Sum_probs=48.9

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCC--eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGY--TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCS  100 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d  100 (294)
                      ..+.++|.|+| .|.+|..++..|.+.|+  +|++++|+++..+....   .     ++...   ..  .+..+.++++|
T Consensus         3 ~~~~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~---~-----g~~~~---~~--~~~~~~~~~aD   68 (307)
T PRK07502          3 APLFDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRARARE---L-----GLGDR---VT--TSAAEAVKGAD   68 (307)
T ss_pred             ccCCcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHh---C-----CCCce---ec--CCHHHHhcCCC
Confidence            33457899999 59999999999999985  89999998755443332   1     11100   01  12345567899


Q ss_pred             EEEecCCC
Q 043792          101 GLFYSFEP  108 (294)
Q Consensus       101 ~Vih~a~~  108 (294)
                      +||.+...
T Consensus        69 vViiavp~   76 (307)
T PRK07502         69 LVILCVPV   76 (307)
T ss_pred             EEEECCCH
Confidence            99999764

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.70  E-value=0.01  Score=51.30  Aligned_cols=75  Identities=20%  Similarity=0.205  Sum_probs=52.3

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCCh---hHHHHHh-ccC
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDY---HSLVNAL-KGC   99 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~---~~~~~~~-~~~   99 (294)
                      ..+.+|||+||+|.+|..+++.+...|.+|++++++.++.+.+++   .     +++.+ .|..+.   +.+.+.. .++
T Consensus       142 ~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~---~-----Ga~~v-i~~~~~~~~~~v~~~~~~gv  212 (329)
T cd08294         142 KAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE---L-----GFDAV-FNYKTVSLEEALKEAAPDGI  212 (329)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---c-----CCCEE-EeCCCccHHHHHHHHCCCCc
Confidence            456899999999999999999999999999999888776666554   2     22222 122222   2233322 258


Q ss_pred             CEEEecCC
Q 043792          100 SGLFYSFE  107 (294)
Q Consensus       100 d~Vih~a~  107 (294)
                      |.|+++.+
T Consensus       213 d~vld~~g  220 (329)
T cd08294         213 DCYFDNVG  220 (329)
T ss_pred             EEEEECCC
Confidence            99999877

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=96.70  E-value=0.0034  Score=53.52  Aligned_cols=65  Identities=12%  Similarity=0.103  Sum_probs=47.7

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEecCC
Q 043792           28 TVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSFE  107 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~a~  107 (294)
                      +|.|+|. |.+|+.+++.|++.|++|++++|++++.+.+..   .     +..       ...+..++++++|+||-+..
T Consensus         1 ~IgvIG~-G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~---~-----g~~-------~~~~~~~~~~~aDivi~~vp   64 (291)
T TIGR01505         1 KVGFIGL-GIMGSPMSINLAKAGYQLHVTTIGPEVADELLA---A-----GAV-------TAETARQVTEQADVIFTMVP   64 (291)
T ss_pred             CEEEEEe-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH---C-----CCc-------ccCCHHHHHhcCCEEEEecC
Confidence            4788986 999999999999999999999998766555443   1     111       11234566778899888865


Q ss_pred             C
Q 043792          108 P  108 (294)
Q Consensus       108 ~  108 (294)
                      .
T Consensus        65 ~   65 (291)
T TIGR01505        65 D   65 (291)
T ss_pred             C
Confidence            3

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=96.70  E-value=0.013  Score=50.83  Aligned_cols=66  Identities=18%  Similarity=0.101  Sum_probs=49.1

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ...+|+|.|+|. |.||+.+++.|...|++|++.+|++....   .         .+.       -..++.++++++|+|
T Consensus       143 ~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~---~---------~~~-------~~~~l~ell~~aDiV  202 (330)
T PRK12480        143 PVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDL---D---------FLT-------YKDSVKEAIKDADII  202 (330)
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhh---h---------hhh-------ccCCHHHHHhcCCEE
Confidence            346789999997 99999999999999999999998763211   0         011       112477888999988


Q ss_pred             EecCCC
Q 043792          103 FYSFEP  108 (294)
Q Consensus       103 ih~a~~  108 (294)
                      +-+...
T Consensus       203 il~lP~  208 (330)
T PRK12480        203 SLHVPA  208 (330)
T ss_pred             EEeCCC
Confidence            877653

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.68  E-value=0.018  Score=48.04  Aligned_cols=98  Identities=15%  Similarity=0.068  Sum_probs=61.6

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHH--H--hccC
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVN--A--LKGC   99 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~--~--~~~~   99 (294)
                      ..+.+|+|+|+++ +|..+++.+...|.+|++++++++..+.+..   .     .... ..|..+......  .  -..+
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~---~-----g~~~-~~~~~~~~~~~~~~~~~~~~~  202 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKE---L-----GADH-VIDYKEEDLEEELRLTGGGGA  202 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH---h-----CCce-eccCCcCCHHHHHHHhcCCCC
Confidence            4567999999999 9999999999999999999888655554433   2     1111 113222222221  1  1358


Q ss_pred             CEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792          100 SGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus       100 d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      |.+|++++..               .....+++.+...   .+++.++..
T Consensus       203 d~vi~~~~~~---------------~~~~~~~~~l~~~---G~~v~~~~~  234 (271)
T cd05188         203 DVVIDAVGGP---------------ETLAQALRLLRPG---GRIVVVGGT  234 (271)
T ss_pred             CEEEECCCCH---------------HHHHHHHHhcccC---CEEEEEccC
Confidence            9999998742               1133345554444   478877764

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2

Probab=96.68  E-value=0.0094  Score=52.87  Aligned_cols=68  Identities=10%  Similarity=0.072  Sum_probs=53.1

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCCEEEec
Q 043792           28 TVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCSGLFYS  105 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~Vih~  105 (294)
                      ||+|+|+ |.+|..+++.+.+.|++|++++.++........         . ..+..|..|.+.+.++++  ++|.|+-.
T Consensus         1 kililG~-g~~~~~l~~aa~~~G~~v~~~d~~~~~~~~~~a---------d-~~~~~~~~d~~~l~~~~~~~~id~v~~~   69 (380)
T TIGR01142         1 RVLLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA---------H-RSYVINMLDGDALRAVIEREKPDYIVPE   69 (380)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhhhC---------c-eEEEcCCCCHHHHHHHHHHhCCCEEEec
Confidence            6899996 999999999999999999999987654322111         1 355678889998988887  69999865


Q ss_pred             C
Q 043792          106 F  106 (294)
Q Consensus       106 a  106 (294)
                      .
T Consensus        70 ~   70 (380)
T TIGR01142        70 I   70 (380)
T ss_pred             c
Confidence            4

This enzyme is an alternative to PurN (TIGR00639)

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.67  E-value=0.0072  Score=52.80  Aligned_cols=95  Identities=14%  Similarity=0.043  Sum_probs=53.4

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHH-CCCe---EEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCE
Q 043792           26 TKTVCVMDASGHFASALVRRLLL-RGYT---VHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~-~g~~---V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~  101 (294)
                      |++|.|.||||++|+.+++.|++ ..+.   +..++.+.+. .....   +.    +-.....++.+++.    +.++|+
T Consensus         1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg-~~~~~---f~----g~~~~v~~~~~~~~----~~~~Di   68 (369)
T PRK06598          1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAG-GAAPS---FG----GKEGTLQDAFDIDA----LKKLDI   68 (369)
T ss_pred             CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhC-Ccccc---cC----CCcceEEecCChhH----hcCCCE
Confidence            47899999999999999995555 4565   6665543211 11111   11    11122233333332    367999


Q ss_pred             EEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCc-EEEEecCc
Q 043792          102 LFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD-KVVFTSSL  149 (294)
Q Consensus       102 Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~v~~Ss~  149 (294)
                      ||-+++..                .+..+...+.+. |.+ .+|=.||.
T Consensus        69 vf~a~~~~----------------~s~~~~~~~~~a-G~~~~VID~Ss~  100 (369)
T PRK06598         69 IITCQGGD----------------YTNEVYPKLRAA-GWQGYWIDAAST  100 (369)
T ss_pred             EEECCCHH----------------HHHHHHHHHHhC-CCCeEEEECChH
Confidence            99888632                133455555555 653 35556654

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.67  E-value=0.0032  Score=57.40  Aligned_cols=71  Identities=17%  Similarity=0.160  Sum_probs=49.3

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      ..+++++|+|+ |.+|+.++..|.+.|++|++++|+.++.+.+.+.+       +...  .++   +++. .+.++|+||
T Consensus       330 ~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~-------~~~~--~~~---~~~~-~l~~~DiVI  395 (477)
T PRK09310        330 LNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRC-------QGKA--FPL---ESLP-ELHRIDIII  395 (477)
T ss_pred             cCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------ccce--ech---hHhc-ccCCCCEEE
Confidence            35689999996 89999999999999999999988876655554411       1111  111   1121 146789999


Q ss_pred             ecCCC
Q 043792          104 YSFEP  108 (294)
Q Consensus       104 h~a~~  108 (294)
                      +|...
T Consensus       396 natP~  400 (477)
T PRK09310        396 NCLPP  400 (477)
T ss_pred             EcCCC
Confidence            99654

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.67  E-value=0.0037  Score=54.27  Aligned_cols=42  Identities=19%  Similarity=0.184  Sum_probs=36.0

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHH
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEE   68 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~   68 (294)
                      +|+|.|+|+ |-+|..++..|++.|++|++++|+++..+.+..
T Consensus         4 ~m~I~iIG~-G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~   45 (328)
T PRK14618          4 GMRVAVLGA-GAWGTALAVLAASKGVPVRLWARRPEFAAALAA   45 (328)
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence            468999997 999999999999999999999998766555544

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=96.64  E-value=0.0046  Score=57.18  Aligned_cols=44  Identities=23%  Similarity=0.156  Sum_probs=38.1

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHH
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEE   68 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~   68 (294)
                      ..+++++|+|+ |.+|+.++..|.+.|.+|+++.|+.++.+.+.+
T Consensus       377 ~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~  420 (529)
T PLN02520        377 LAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELAD  420 (529)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            45689999999 899999999999999999999998776666655

>PRK07411 hypothetical protein; Validated

Probab=96.64  E-value=0.052  Score=48.26  Aligned_cols=82  Identities=10%  Similarity=0.149  Sum_probs=51.6

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCC-------------------hhhHHHHHhhccCCCCeEEEEC
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGK-------------------LQCIEEELINYNEEKKLKVFQA   84 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-------------------~~~l~~~~~~~~~~~~v~~~~~   84 (294)
                      +..+|+|.|+ |.+|+++++.|...|. ++++++.+.-.                   .+...+.++.....-+++.+..
T Consensus        37 ~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~~  115 (390)
T PRK07411         37 KAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYET  115 (390)
T ss_pred             hcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEec
Confidence            4679999998 8899999999999984 45555543111                   1111221111122234555555


Q ss_pred             CCCChhHHHHHhccCCEEEecCCC
Q 043792           85 DPFDYHSLVNALKGCSGLFYSFEP  108 (294)
Q Consensus        85 Dl~~~~~~~~~~~~~d~Vih~a~~  108 (294)
                      .++ .+...+++.++|+||.|...
T Consensus       116 ~~~-~~~~~~~~~~~D~Vvd~~d~  138 (390)
T PRK07411        116 RLS-SENALDILAPYDVVVDGTDN  138 (390)
T ss_pred             ccC-HHhHHHHHhCCCEEEECCCC
Confidence            554 34567788999999999763

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.63  E-value=0.0091  Score=53.28  Aligned_cols=67  Identities=16%  Similarity=0.021  Sum_probs=49.8

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      ..+++|+|+|. |.||+.+++.|...|.+|+++++++.+......        .+.++.        .+.++++++|+||
T Consensus       210 l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~--------~G~~v~--------~l~eal~~aDVVI  272 (425)
T PRK05476        210 IAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAAM--------DGFRVM--------TMEEAAELGDIFV  272 (425)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHh--------cCCEec--------CHHHHHhCCCEEE
Confidence            36789999997 999999999999999999999988765432222        122221        2456677899999


Q ss_pred             ecCC
Q 043792          104 YSFE  107 (294)
Q Consensus       104 h~a~  107 (294)
                      .+.+
T Consensus       273 ~aTG  276 (425)
T PRK05476        273 TATG  276 (425)
T ss_pred             ECCC
Confidence            8765

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.63  E-value=0.015  Score=46.79  Aligned_cols=72  Identities=15%  Similarity=0.069  Sum_probs=51.8

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      ..+++|+|.|| |-+|..-++.|++.|.+|++++....  +.+.+   +. ...+++++..++.. +    .+.+++.||
T Consensus         7 l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~--~~l~~---l~-~~~~i~~~~~~~~~-~----dl~~~~lVi   74 (205)
T TIGR01470         7 LEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE--SELTL---LA-EQGGITWLARCFDA-D----ILEGAFLVI   74 (205)
T ss_pred             cCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC--HHHHH---HH-HcCCEEEEeCCCCH-H----HhCCcEEEE
Confidence            45689999998 99999999999999999999887654  22222   11 12378898888753 2    256777777


Q ss_pred             ecCC
Q 043792          104 YSFE  107 (294)
Q Consensus       104 h~a~  107 (294)
                      -+-+
T Consensus        75 ~at~   78 (205)
T TIGR01470        75 AATD   78 (205)
T ss_pred             ECCC
Confidence            5544

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=96.63  E-value=0.012  Score=52.37  Aligned_cols=68  Identities=15%  Similarity=0.016  Sum_probs=51.0

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      ..+++|+|+|+ |.||+.+++.+...|.+|+++++++.+......   .     ++..+  +      +.++++++|+||
T Consensus       200 l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~---~-----G~~~~--~------~~e~v~~aDVVI  262 (413)
T cd00401         200 IAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAAM---E-----GYEVM--T------MEEAVKEGDIFV  262 (413)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHHh---c-----CCEEc--c------HHHHHcCCCEEE
Confidence            45789999998 999999999999999999999888766544333   1     33322  1      235667899999


Q ss_pred             ecCCC
Q 043792          104 YSFEP  108 (294)
Q Consensus       104 h~a~~  108 (294)
                      .+.+.
T Consensus       263 ~atG~  267 (413)
T cd00401         263 TTTGN  267 (413)
T ss_pred             ECCCC
Confidence            98763

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=96.62  E-value=0.016  Score=45.61  Aligned_cols=80  Identities=14%  Similarity=0.107  Sum_probs=54.0

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCC-hhHHHHHhccCCE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFD-YHSLVNALKGCSG  101 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~-~~~~~~~~~~~d~  101 (294)
                      ...+++|+|.|-+.-+|+.|+..|+++|..|++++.+....         +..............| ...+.+.++++|+
T Consensus        59 ~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~---------~~~~~~~~hs~t~~~~~~~~l~~~~~~ADI  129 (197)
T cd01079          59 RLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQV---------FTRGESIRHEKHHVTDEEAMTLDCLSQSDV  129 (197)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccc---------cccccccccccccccchhhHHHHHhhhCCE
Confidence            46789999999999999999999999999999986442110         0000011111111112 2246778889999


Q ss_pred             EEecCCCCCC
Q 043792          102 LFYSFEPPSD  111 (294)
Q Consensus       102 Vih~a~~~~~  111 (294)
                      ||-.+|.+..
T Consensus       130 VIsAvG~~~~  139 (197)
T cd01079         130 VITGVPSPNY  139 (197)
T ss_pred             EEEccCCCCC
Confidence            9999887763

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=96.62  E-value=0.0049  Score=52.25  Aligned_cols=66  Identities=17%  Similarity=0.151  Sum_probs=46.2

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEecC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSF  106 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~a  106 (294)
                      |+|.|.|. |.+|..++..|.+.|++|++++|+++..+....   .    ..+..    ..+.  . +.++++|.||-+.
T Consensus         1 m~I~IIG~-G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~---~----g~~~~----~~~~--~-~~~~~aDlVilav   65 (279)
T PRK07417          1 MKIGIVGL-GLIGGSLGLDLRSLGHTVYGVSRRESTCERAIE---R----GLVDE----ASTD--L-SLLKDCDLVILAL   65 (279)
T ss_pred             CeEEEEee-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---C----CCccc----ccCC--H-hHhcCCCEEEEcC
Confidence            47999995 999999999999999999999998765544433   1    01111    1111  1 2457889999886


Q ss_pred             C
Q 043792          107 E  107 (294)
Q Consensus       107 ~  107 (294)
                      .
T Consensus        66 p   66 (279)
T PRK07417         66 P   66 (279)
T ss_pred             C
Confidence            5

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.61  E-value=0.014  Score=51.11  Aligned_cols=76  Identities=16%  Similarity=0.131  Sum_probs=51.0

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCC---h-hHHHHHh-cc
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFD---Y-HSLVNAL-KG   98 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~---~-~~~~~~~-~~   98 (294)
                      ..+.+|+|+||+|.+|..++..+...|.+|++++++.++.+.+..+  +     +++.+. |..+   . +.+.+.. .+
T Consensus       157 ~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~--l-----Ga~~vi-~~~~~~~~~~~i~~~~~~g  228 (348)
T PLN03154        157 KKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK--L-----GFDEAF-NYKEEPDLDAALKRYFPEG  228 (348)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHh--c-----CCCEEE-ECCCcccHHHHHHHHCCCC
Confidence            4568999999999999999999999999999888877665555421  2     222221 2221   1 2222222 25


Q ss_pred             CCEEEecCC
Q 043792           99 CSGLFYSFE  107 (294)
Q Consensus        99 ~d~Vih~a~  107 (294)
                      +|.||.+.+
T Consensus       229 vD~v~d~vG  237 (348)
T PLN03154        229 IDIYFDNVG  237 (348)
T ss_pred             cEEEEECCC
Confidence            899999987

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=96.61  E-value=0.0079  Score=51.54  Aligned_cols=41  Identities=17%  Similarity=0.276  Sum_probs=34.9

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHH
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEE   68 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~   68 (294)
                      |+|+|.|+ |-+|..++..|.+.|++|++++|+.+..+.+..
T Consensus         1 m~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~   41 (304)
T PRK06522          1 MKIAILGA-GAIGGLFGAALAQAGHDVTLVARRGAHLDALNE   41 (304)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECChHHHHHHHH
Confidence            57999998 999999999999999999999997655554443

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=96.58  E-value=0.025  Score=48.48  Aligned_cols=40  Identities=15%  Similarity=0.174  Sum_probs=34.1

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHH
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIE   67 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~   67 (294)
                      |+|.|+|. |.+|..+++.|++.|++|++.+|++++.+.+.
T Consensus         1 m~Ig~IGl-G~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~   40 (299)
T PRK12490          1 MKLGLIGL-GKMGGNMAERLREDGHEVVGYDVNQEAVDVAG   40 (299)
T ss_pred             CEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence            47999985 99999999999999999999999876655443

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=96.57  E-value=0.016  Score=47.60  Aligned_cols=35  Identities=29%  Similarity=0.280  Sum_probs=28.7

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCC-CeEEEE-ecCC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRG-YTVHAA-LHNH   60 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~-~r~~   60 (294)
                      ++||.|.|++|-.|+.+++.+.+.+ .++.+. +|..
T Consensus         2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~   38 (266)
T COG0289           2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPG   38 (266)
T ss_pred             CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCC
Confidence            6899999999999999999999875 665554 5544

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.57  E-value=0.028  Score=51.58  Aligned_cols=76  Identities=16%  Similarity=-0.047  Sum_probs=51.5

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC-hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK-LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ..+++|+|+|+ |.+|..+++.|.++|++|++++++... ...+...+    ...+++++.++-..      ...++|.|
T Consensus        14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l----~~~gv~~~~~~~~~------~~~~~D~V   82 (480)
T PRK01438         14 WQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAIL----EALGATVRLGPGPT------LPEDTDLV   82 (480)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHH----HHcCCEEEECCCcc------ccCCCCEE
Confidence            45679999998 999999999999999999999865432 22222211    11256766554322      23468999


Q ss_pred             EecCCCCC
Q 043792          103 FYSFEPPS  110 (294)
Q Consensus       103 ih~a~~~~  110 (294)
                      |...|...
T Consensus        83 v~s~Gi~~   90 (480)
T PRK01438         83 VTSPGWRP   90 (480)
T ss_pred             EECCCcCC
Confidence            98877644

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	294
2c29_D	337	Structure Of Dihydroflavonol Reductase From Vitis V		2e-27
2rh8_A	338	Structure Of Apo Anthocyanidin Reductase From Vitis		3e-22
2p4h_X	322	Crystal Structure Of Vestitone Reductase From Alfal		4e-18
1y1p_A	342	X-Ray Structure Of Aldehyde Reductase With Nadph Le		9e-05
1ujm_A	342	Crystal Structure Of Aldehyde Reductase 2 From Spor		2e-04

>pdb|2C29|D Chain D, Structure Of Dihydroflavonol Reductase From Vitis Vinifera At 1.8 A. Length = 337

Iteration: 1
 Score =  119 bits (298), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 131/260 (50%), Gaps = 21/260 (8%)
Query: 24  NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQ 83
           + ++TVCV  ASG   S LV RLL RGYTV A + +   ++ ++  L     E  L +++
Sbjct: 3   SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWK 62
Query: 84  ADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDE---LTAEVETMAAHNVLEACAQTNTV 140
           AD  D  S   A+KGC+G+F+   P    S   E   +   +E M    ++++CA   TV
Sbjct: 63  ADLADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLG--IMKSCAAAKTV 120
Query: 141 DKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLC--KKFKLW-HGLSKTLAEKTAWA 197
            ++VFTSS   V    H+  P    +DE  WSD+  C  KK   W + +SKTLAE+ AW 
Sbjct: 121 RRLVFTSSAGTVNIQEHQ-LPV---YDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWK 176
Query: 198 LAMDRGISMVSINGGLVMGPDVTISNP--------YLKGAAEMYEDGVMAS-VDLRFYVD 248
            A +  I  ++I   LV+GP +  S P         + G    Y        V L    +
Sbjct: 177 YAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCN 236
Query: 249 AHICVFEDVSSYGRYLCFNH 268
           AHI +FE+  + GRY+C +H
Sbjct: 237 AHIYLFENPKAEGRYICSSH 256

>pdb|2RH8|A Chain A, Structure Of Apo Anthocyanidin Reductase From Vitis Vinifera Length = 338

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 124/261 (47%), Gaps = 27/261 (10%)
Query: 27  KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADP 86
           KT CV+  +G  AS LV+ LL +GY V+  + +    + +   L+   E   LK+F+AD 
Sbjct: 10  KTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSH-LLELQELGDLKIFRADL 68
Query: 87  FDYHSLVNALKGCSGLFYSFEP---PSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKV 143
            D  S    + GC  +F+   P    S+    D +   ++ +   NV++AC +  +V +V
Sbjct: 69  TDELSFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVV--NVMKACTRAKSVKRV 126
Query: 144 VFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFK--LW-HGLSKTLAEKTAWALAM 200
           + TSS  AV  N    + T    DE+NW+D+      K   W +  SKTLAEK AW  A 
Sbjct: 127 ILTSSAAAVTINQL--DGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAE 184
Query: 201 DRGISMVSINGGLVMGPDVTISNPYLKGAA-------EMYEDGVM------ASVDLRFYV 247
           +  I ++++   L+ G  +T   P   G A       E   +G+        SV +    
Sbjct: 185 ENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVE 244
Query: 248 D---AHICVFEDVSSYGRYLC 265
           D   AHI V E  S+ GRY+C
Sbjct: 245 DVCRAHIFVAEKESASGRYIC 265

>pdb|2P4H|X Chain X, Crystal Structure Of Vestitone Reductase From Alfalfa (Medicago Sativa L.) Length = 322

Iteration: 1
 Score = 88.2 bits (217), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 123/265 (46%), Gaps = 17/265 (6%)
Query: 29  VCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINY-NEEKKLKVFQADPF 87
           VCV   +G   S +++ LL  GY+V+  +    + +     L N     +KL  F AD  
Sbjct: 4   VCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLS 63
Query: 88  DYHSLVNALKGCSGLFYSFEPPS-DHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFT 146
           +  S   A++GC G+F++  P     S  +E+  +     A  +L+AC  + TV + ++T
Sbjct: 64  NPDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYT 123
Query: 147 SSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLW---HGLSKTLAEKTAWALAMDRG 203
           SS +AV +N    +      DE +WSDV+L +  K +   + +SKTLAEK         G
Sbjct: 124 SSGSAVSFNGKDKDV----LDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNG 179
Query: 204 ISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDL-RFYV-------DAHICVFE 255
           I +V++    ++G  V    P     A +   G    + + RF++        AHI + E
Sbjct: 180 IDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYLLE 239
Query: 256 DVSSYGRYLCFNHVINCNEDAMKLA 280
           +    GRY C   ++   E +  L+
Sbjct: 240 NSVPGGRYNCSPFIVPIEEMSQLLS 264

>pdb|1Y1P|A Chain A, X-Ray Structure Of Aldehyde Reductase With Nadph Length = 342

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 89/205 (43%), Gaps = 21/205 (10%)
Query: 29  VCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEEL-INYNEEKKLKVFQADPF 87
           V V  A+G  AS +V +LL  GY V     +  KL  +++     Y    +  V + D  
Sbjct: 14  VLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVE-DML 72
Query: 88  DYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTS 147
              +    +KG +G+ +     S  + YDE+          N L A A T +V + V TS
Sbjct: 73  KQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPA-IGGTLNALRAAAATPSVKRFVLTS 131
Query: 148 S-LTAVVWNNHRDNPTSHDFDERNWSDVNLCK---------KFKLW-HGLSKTLAEKTAW 196
           S ++A++    + N      DE++W+  ++ K         +  LW +  SKT AE  AW
Sbjct: 132 STVSALI---PKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAW 188
Query: 197 ALAMDRGISMVSINGGLVMGPDVTI 221
              MD      ++N  L   P+ TI
Sbjct: 189 KF-MDENKPHFTLNAVL---PNYTI 209

>pdb|1UJM|A Chain A, Crystal Structure Of Aldehyde Reductase 2 From Sporobolomyces Salmonicolor Aku4429 Length = 342

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 17/180 (9%)
Query: 29  VCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEEL-INYNEEKKLKVFQADPF 87
           V V  A+G  AS +V +LL  GY V     +  KL  +++     Y    +  V + D  
Sbjct: 14  VLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVE-DXL 72
Query: 88  DYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTS 147
              +    +KG +G+ +     S  + YDE+          N L A A T +V + V TS
Sbjct: 73  KQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPA-IGGTLNALRAAAATPSVKRFVLTS 131
Query: 148 S-LTAVVWNNHRDNPTSHDFDERNWSDVNLCK---------KFKLW-HGLSKTLAEKTAW 196
           S ++A++    + N      DE++W+  ++ K         +  LW +  SKT AE  AW
Sbjct: 132 STVSALI---PKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAW 188

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	294
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	3e-69
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	2e-61
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	1e-56
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	5e-43
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	1e-34
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	2e-31
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	2e-10
1xq6_A	253	Unknown protein; structural genomics, protein stru	5e-10
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	8e-10
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	2e-08
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	3e-08
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	8e-07
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	1e-06
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	2e-06
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	2e-06
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	4e-06
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	7e-06
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	1e-05
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	2e-05
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	2e-05
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	2e-05
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	5e-05
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	1e-04
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	1e-04
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	2e-04
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	4e-04

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score =  216 bits (552), Expect = 3e-69
 Identities = 71/271 (26%), Positives = 117/271 (43%), Gaps = 21/271 (7%)

Query: 27  KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNE-EKKLKVFQAD 85
             VCV   +G   S +++ LL  GY+V+  +    + +     L N     +KL  F AD
Sbjct: 2   GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNAD 61

Query: 86  PFDYHSLVNALKGCSGLFYSFEPPSDHSTYDE---LTAEVETMAAHNVLEACAQTNTVDK 142
             +  S   A++GC G+F++  P     +  E       V+   A  +L+AC  + TV +
Sbjct: 62  LSNPDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVD--GALGILKACVNSKTVKR 119

Query: 143 VVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHG---LSKTLAEKTAWALA 199
            ++TSS +AV +N    +      DE +WSDV+L +  K +     +SKTLAEK      
Sbjct: 120 FIYTSSGSAVSFNGKDKDV----LDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFG 175

Query: 200 MDRGISMVSINGGLVMGP----DVTISNP----YLKGAAEMYEDGVMASVDLRFYVDAHI 251
              GI +V++    ++G      +  S       + G  E         V +     AHI
Sbjct: 176 EQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHI 235

Query: 252 CVFEDVSSYGRYLCFNHVINCNEDAMKLARM 282
            + E+    GRY C   ++   E +  L+  
Sbjct: 236 YLLENSVPGGRYNCSPFIVPIEEMSQLLSAK 266

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score =  197 bits (502), Expect = 2e-61
 Identities = 88/280 (31%), Positives = 135/280 (48%), Gaps = 33/280 (11%)

Query: 23  SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVF 82
            + ++TVCV  ASG   S LV RLL RGYTV A + +   ++ ++  L     E  L ++
Sbjct: 2   GSQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLW 61

Query: 83  QADPFDYHSLVNALKGCSGLF-----YSFEPPSDHSTYDELT-AEVE-TMAAHNVLEACA 135
           +AD  D  S   A+KGC+G+F       FE        +E+    +E  +    ++++CA
Sbjct: 62  KADLADEGSFDEAIKGCTGVFHVATPMDFESKDP---ENEVIKPTIEGML---GIMKSCA 115

Query: 136 QTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL---WHGLSKTLAE 192
              TV ++VFTSS   V    H+       +DE  WSD+  C+  K+    + +SKTLAE
Sbjct: 116 AAKTVRRLVFTSSAGTVNIQEHQLPV----YDESCWSDMEFCRAKKMTAWMYFVSKTLAE 171

Query: 193 KTAWALAMDRGISMVSINGGLVMGP----DVTISNP----YLKGAAEMYEDGVMAS-VDL 243
           + AW  A +  I  ++I   LV+GP     +  S       + G    Y        V L
Sbjct: 172 QAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHL 231

Query: 244 RFYVDAHICVFEDVSSYGRYLCFNHVINCNEDAMKLARML 283
               +AHI +FE+  + GRY+C +H     +    LA+ML
Sbjct: 232 DDLCNAHIYLFENPKAEGRYICSSHDCIILD----LAKML 267

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score =  184 bits (470), Expect = 1e-56
 Identities = 78/283 (27%), Positives = 123/283 (43%), Gaps = 39/283 (13%)

Query: 27  KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADP 86
           KT CV+  +G  AS LV+ LL +GY V+  + +    + +   L+   E   LK+F+AD 
Sbjct: 10  KTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSH-LLELQELGDLKIFRADL 68

Query: 87  FDYHSLVNALKGCSGLF-----YSFEPPSDHSTYDELT-AEVE-TMAAHNVLEACAQTNT 139
            D  S    + GC  +F       F         +++    ++  +   NV++AC +  +
Sbjct: 69  TDELSFEAPIAGCDFVFHVATPVHFASEDP---ENDMIKPAIQGVV---NVMKACTRAKS 122

Query: 140 VDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL---WHGLSKTLAEKTAW 196
           V +V+ TSS  AV  N      T    DE+NW+D+      K     +  SKTLAEK AW
Sbjct: 123 VKRVILTSSAAAVTINQLD--GTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAW 180

Query: 197 ALAMDRGISMVSINGGLVMGP----DVTISNP----YLKGAAEMYE--------DGVMAS 240
             A +  I ++++   L+ G     DV  S       + G   +           G ++ 
Sbjct: 181 KFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSI 240

Query: 241 VDLRFYVDAHICVFEDVSSYGRYLCFNHVINCNEDAMKLARML 283
             +     AHI V E  S+ GRY+C     +  E    LA+ L
Sbjct: 241 AHVEDVCRAHIFVAEKESASGRYICCAANTSVPE----LAKFL 279

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score =  149 bits (378), Expect = 5e-43
 Identities = 52/289 (17%), Positives = 87/289 (30%), Gaps = 39/289 (13%)

Query: 27  KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADP 86
             V V  A+G  AS +V +LL  GY V     +  KL  +++        +       D 
Sbjct: 12  SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDM 71

Query: 87  FDYHSLVNALKGCSGLF-----YSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD 141
               +    +KG +G+       SF    D    + +T  +      N L A A T +V 
Sbjct: 72  LKQGAYDEVIKGAAGVAHIASVVSFSNKYD----EVVTPAIG--GTLNALRAAAATPSVK 125

Query: 142 KVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLC----------KKFKLWHGLSKTLA 191
           + V TSS  + +      N      DE++W+  ++           +K    +  SKT A
Sbjct: 126 RFVLTSSTVSALIPKP--NVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEA 183

Query: 192 EKTAWALAMDRG--ISMVSINGGLVMGPDVTISNP----------YLKGAAEMYED--GV 237
           E  AW    +     ++ ++     +G                     G           
Sbjct: 184 ELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPP 243

Query: 238 MASVDLRFYVDAHICVFEDVSSYG-RYLCFNHVINCNEDAMKLARMLLP 285
              V        H+           R        +     +   R L P
Sbjct: 244 QYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFD-WNTVLATFRKLYP 291

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score =  124 bits (312), Expect = 1e-34
 Identities = 44/242 (18%), Positives = 80/242 (33%), Gaps = 29/242 (11%)

Query: 25  ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQA 84
             K + ++ ASG   SAL+   L RG+ V A + +  K++   E          LKV +A
Sbjct: 3   KVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENE---------HLKVKKA 53

Query: 85  DPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVV 144
           D      +    KG   +  +F P  +    +    +        +++   +   V++ +
Sbjct: 54  DVSSLDEVCEVCKGADAVISAFNPGWN----NPDIYDETIKVYLTIIDGVKKAG-VNRFL 108

Query: 145 FTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGI 204
                 ++        P     D          +  +      K L E     L  ++ I
Sbjct: 109 MVGGAGSL-----FIAPGLRLMDS--------GEVPENILPGVKALGEFYLNFLMKEKEI 155

Query: 205 SMVSINGGLVMGPDVTISNPYLKGAAEMYEDGV-MASVDLRFYVDAHICVFEDVSSYGRY 263
             V  +    M P V  +  Y  G  +M  D V  + + +  Y  A I   E    +   
Sbjct: 156 DWVFFSPAADMRPGV-RTGRYRLGKDDMIVDIVGNSHISVEDYAAAMIDELEHPKHHQER 214

Query: 264 LC 265
             
Sbjct: 215 FT 216

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score =  118 bits (298), Expect = 2e-31
 Identities = 45/275 (16%), Positives = 85/275 (30%), Gaps = 23/275 (8%)

Query: 15  VDRDGYDSSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYN 74
           +D        A     V+ A+G       R +   G+ +        ++Q +        
Sbjct: 2   MDEQPLSRPGAHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYL----- 56

Query: 75  EEKKLKVFQADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEAC 134
              + +   A+  D+  L  AL+G  G+ +S           +          +    AC
Sbjct: 57  ---EPECRVAEMLDHAGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAAC 113

Query: 135 AQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKT 194
            Q   V ++++  S    +  + +  P      E  + D       K  + L K   ++ 
Sbjct: 114 LQAR-VPRILYVGS-AYAMPRHPQGLP----GHEGLFYDS--LPSGKSSYVLCKWALDEQ 165

Query: 195 AWALAMDRGISMVSINGGLVMGPDVTISNP------YLKGAAEMYEDGVMASVDLRFYVD 248
           A   A   G+ +V    G+V+G                 G    Y  G    +D      
Sbjct: 166 AREQA-RNGLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHYVAGQRNVIDAAEAGR 224

Query: 249 AHICVFEDVSSYGRYLCFNHVINCNEDAMKLARML 283
             +   E      RYL   H +   +   ++A +L
Sbjct: 225 GLLMALERGRIGERYLLTGHNLEMADLTRRIAELL 259

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 59.8 bits (145), Expect = 2e-10
 Identities = 24/140 (17%), Positives = 51/140 (36%), Gaps = 16/140 (11%)

Query: 23  SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVF 82
           +   KT+ V+ A+G   ++L+R     G+ V A +H+   L   E +         + +F
Sbjct: 2   AQQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQ-----AIPNVTLF 56

Query: 83  QADPFDYHSLV-NALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD 141
           Q    +   L+    +G    F +              A  E     ++ +A  +  T+ 
Sbjct: 57  QGPLLNNVPLMDTLFEGAHLAFINTTS----------QAGDEIAIGKDLADAAKRAGTIQ 106

Query: 142 KVVFTSSLTAVVWNNHRDNP 161
             +++S     ++      P
Sbjct: 107 HYIYSSMPDHSLYGPWPAVP 126

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 57.6 bits (139), Expect = 5e-10
 Identities = 25/146 (17%), Positives = 42/146 (28%), Gaps = 27/146 (18%)

Query: 23  SNATKTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELINYNEEKKLK 80
           S    TV V  ASG     + ++L      +     + +    + I  E           
Sbjct: 1   SANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGE---------AD 51

Query: 81  VFQADPFDYHSLVNALKGCSGLFY---------------SFEPPSDHSTYDELTAEVETM 125
           VF  D  D  S+  A +G   L                     P       +   +V+ +
Sbjct: 52  VFIGDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWI 111

Query: 126 AAHNVLEACAQTNTVDKVVFTSSLTA 151
              N ++A      V  +V   S+  
Sbjct: 112 GQKNQIDAAKVAG-VKHIVVVGSMGG 136

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 56.5 bits (137), Expect = 8e-10
 Identities = 23/125 (18%), Positives = 40/125 (32%), Gaps = 14/125 (11%)

Query: 25  ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQA 84
           A K + +  A+G      + + +  GY V   + +  +L                 V   
Sbjct: 2   AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPR--------PAHVVVG 53

Query: 85  DPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVV 144
           D      +   + G   +       +D S        V +  A N++ A      VDKVV
Sbjct: 54  DVLQAADVDKTVAGQDAVIVLLGTRNDLSPTT-----VMSEGARNIVAAMKAHG-VDKVV 107

Query: 145 FTSSL 149
             +S 
Sbjct: 108 ACTSA 112

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 53.5 bits (129), Expect = 2e-08
 Identities = 30/181 (16%), Positives = 52/181 (28%), Gaps = 35/181 (19%)

Query: 22  SSNATKTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEEELINYNEEKKLK 80
           S    K V V   +G    ++ R LL  G + V     N  K     +EL      +  +
Sbjct: 1   SMVDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KEL----RLQGAE 54

Query: 81  VFQADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTV 140
           V Q D  D   +  AL G    F         + ++  + E E      + +  A+   +
Sbjct: 55  VVQGDQDDQVIMELALNGAYATF------IVTNYWESCSQEQEVKQGKLLADL-ARRLGL 107

Query: 141 DKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAM 200
             VV++                                +    H   K   E+    + +
Sbjct: 108 HYVVYSGLENIKKLTAG---------------------RLAAAHFDGKGEVEEYFRDIGV 146

Query: 201 D 201
            
Sbjct: 147 P 147

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 52.5 bits (126), Expect = 3e-08
 Identities = 21/129 (16%), Positives = 46/129 (35%), Gaps = 22/129 (17%)

Query: 22  SSNATKTVCVMDASGHFASALVRRLLLR-GYTVHAALHNHGKLQCIEEELINYNEEKKLK 80
                K V ++ A G  A  ++ +L  +             K+                +
Sbjct: 19  FQGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPT--------NSQ 70

Query: 81  VFQADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTV 140
           +   D  ++ +L  A++G   ++ +            LT E   + A++V+ A  +   V
Sbjct: 71  IIMGDVLNHAALKQAMQGQDIVYAN------------LTGEDLDIQANSVIAA-MKACDV 117

Query: 141 DKVVFTSSL 149
            +++F  SL
Sbjct: 118 KRLIFVLSL 126

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 48.5 bits (116), Expect = 8e-07
 Identities = 36/184 (19%), Positives = 63/184 (34%), Gaps = 27/184 (14%)

Query: 27  KTVCVMDASGHFASALVRRLLLRGYTVHAA-LHNHGKLQCIEEELINYNEEKKLKVFQAD 85
             + V  A+G   SA+   L    + V  + + + G  +  EE            +   D
Sbjct: 3   NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAEAHEE------------IVACD 50

Query: 86  PFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVF 145
             D  ++ + +K C G+ +      +    D L  +   + A+N+ EA        ++VF
Sbjct: 51  LADAQAVHDLVKDCDGIIHLGGVSVERPWNDIL--QANIIGAYNLYEAARNLG-KPRIVF 107

Query: 146 TSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGIS 205
            SS    +    R      +   R  S           +GLSK   E  A        I 
Sbjct: 108 ASS-NHTIGYYPRTTRIDTEVPRRPDSL----------YGLSKCFGEDLASLYYHKFDIE 156

Query: 206 MVSI 209
            ++I
Sbjct: 157 TLNI 160

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 47.7 bits (114), Expect = 1e-06
 Identities = 17/118 (14%), Positives = 41/118 (34%), Gaps = 12/118 (10%)

Query: 34  ASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLV 93
           A+G  A  L+  L  +G+   A + N  +   + E            +  A+  +     
Sbjct: 29  ANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGA-------SDIVVANLEE--DFS 79

Query: 94  NALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTA 151
           +A      + ++    S   T  + T  ++   A   ++   +   + + +  SS+  
Sbjct: 80  HAFASIDAVVFAAG--SGPHTGADKTILIDLWGAIKTIQEAEKRG-IKRFIMVSSVGT 134

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 14/117 (11%), Positives = 39/117 (33%), Gaps = 18/117 (15%)

Query: 34  ASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQAD-PFDYHSL 92
           ++G    +L++ L    Y ++A      ++               +K    D  +    +
Sbjct: 8   STGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNN----------VKAVHFDVDWTPEEM 57

Query: 93  VNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL 149
              L G   +           +  +   +V+   A  +++A  +   V + +  S++
Sbjct: 58  AKQLHGMDAIINV------SGSGGKSLLKVDLYGAVKLMQAAEKAE-VKRFILLSTI 107

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 47.4 bits (113), Expect = 2e-06
 Identities = 35/197 (17%), Positives = 57/197 (28%), Gaps = 33/197 (16%)

Query: 25  ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQA 84
           A K + V  A+G     +  RL      +   L +   L                +  Q 
Sbjct: 2   AMKRLLVTGAAGQLGRVMRERLAPMAEILR--LADLSPLD---------PAGPNEECVQC 50

Query: 85  DPFDYHSLVNALKGCSGLF----YSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTV 140
           D  D +++   + GC G+      S E P       E   +   +  +N+ EA       
Sbjct: 51  DLADANAVNAMVAGCDGIVHLGGISVEKP------FEQILQGNIIGLYNLYEAARAHG-Q 103

Query: 141 DKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAM 200
            ++VF SS    +    +      D   R              +G+SK   E  A     
Sbjct: 104 PRIVFASS-NHTIGYYPQTERLGPDVPARPDGL----------YGVSKCFGENLARMYFD 152

Query: 201 DRGISMVSINGGLVMGP 217
             G     +  G     
Sbjct: 153 KFGQETALVRIGSCTPE 169

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 46.6 bits (111), Expect = 4e-06
 Identities = 26/161 (16%), Positives = 54/161 (33%), Gaps = 26/161 (16%)

Query: 23  SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYN-EEKKLKV 81
            +    + +  A G  AS + RRL   G+ V A+  +  K + + E++         L+V
Sbjct: 26  PSENLKISITGAGGFIASHIARRLKHEGHYVIAS--DWKKNEHMTEDMFCDEFHLVDLRV 83

Query: 82  FQA-----DPFD--YHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEAC 134
            +      +  D  ++   +      G+ +     S             TM + N++EA 
Sbjct: 84  MENCLKVTEGVDHVFNLAADM----GGMGFIQSNHSV-------IMYNNTMISFNMIEAA 132

Query: 135 AQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVN 175
                + +  + S  +A ++                 SD  
Sbjct: 133 RING-IKRFFYAS--SACIYPEF--KQLETTNVSLKESDAW 168

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 45.3 bits (108), Expect = 7e-06
 Identities = 24/127 (18%), Positives = 44/127 (34%), Gaps = 21/127 (16%)

Query: 28  TVCVMDASGHFASALVRRLLLR--GYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQAD 85
           ++ V  A+G     +++ LL +     + A + N  K   + ++ +        +V   D
Sbjct: 2   SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGV--------EVRHGD 53

Query: 86  PFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAH-NVLEACAQTNTVDKVV 144
                SL  A  G S L   F     +            +  H NV++A      V  + 
Sbjct: 54  YNQPESLQKAFAGVSKLL--FISGPHY-------DNTLLIVQHANVVKAARDAG-VKHIA 103

Query: 145 FTSSLTA 151
           +T    A
Sbjct: 104 YTGYAFA 110

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 45.0 bits (107), Expect = 1e-05
 Identities = 23/119 (19%), Positives = 43/119 (36%), Gaps = 18/119 (15%)

Query: 34  ASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSL 92
           A+GH  + +  + +       H  + N  K+       ++        V Q D F+  S+
Sbjct: 8   ATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVS--------VRQLDYFNQESM 59

Query: 93  VNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTA 151
           V A KG   +   F P   H ++  +          N++ A  Q+  V  ++F      
Sbjct: 60  VEAFKGMDTVV--FIPSIIHPSFKRIP------EVENLVYAAKQSG-VAHIIFIGYYAD 109

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 22/141 (15%), Positives = 43/141 (30%), Gaps = 16/141 (11%)

Query: 40  SALVRRLLLRGYTVHAALHN--HGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK 97
           S LV+RLL  G      + N    +         N  +   ++  +    D   L +   
Sbjct: 46  SNLVKRLLELGVNQVHVVDNLLSAEKI-------NVPDHPAVRFSETSITDDALLASLQD 98

Query: 98  GCSGLFYSFEPPS-DHSTYD-ELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWN 155
               +F+         S +D     E  T+    + E       + KVV++++    +  
Sbjct: 99  EYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAA-GCSIA- 156

Query: 156 NHRDNPTSHDFDERNWSDVNL 176
              +              V+L
Sbjct: 157 ---EKTFDDAKATEETDIVSL 174

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 44.2 bits (104), Expect = 2e-05
 Identities = 20/146 (13%), Positives = 50/146 (34%), Gaps = 9/146 (6%)

Query: 24  NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQ 83
           +    V ++  +G+    +V   +  G+  +            + +++ Y ++   K+ +
Sbjct: 2   DKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIE 61

Query: 84  ADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKV 143
           A   D+  LV+ALK    +          S           +    ++EA  +   + + 
Sbjct: 62  ASLDDHQRLVDALKQVDVVI---------SALAGGVLSHHILEQLKLVEAIKEAGNIKRF 112

Query: 144 VFTSSLTAVVWNNHRDNPTSHDFDER 169
           + +          H   P S  F ++
Sbjct: 113 LPSEFGMDPDIMEHALQPGSITFIDK 138

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 26/139 (18%), Positives = 42/139 (30%), Gaps = 24/139 (17%)

Query: 40  SALVRRLLLRGYTVHAALHN--HGKLQCIEE--ELINYNEEKKLKVFQADPFDYHSLVNA 95
           S L+  LL     V   L N   G  + ++E   L++  +    K  Q D  +     NA
Sbjct: 41  SNLLETLLKLDQKVV-GLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNA 99

Query: 96  LKGCSGLF---------YSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFT 146
             G   +           S   P         +         N+L A      V    + 
Sbjct: 100 CAGVDYVLHQAALGSVPRSINDP-------ITSNATNIDGFLNMLIAARDAK-VQSFTYA 151

Query: 147 SSLTAVVWNNHRDNPTSHD 165
           +S  +  + +H   P   D
Sbjct: 152 AS--SSTYGDHPGLPKVED 168

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 43.0 bits (102), Expect = 5e-05
 Identities = 27/120 (22%), Positives = 41/120 (34%), Gaps = 21/120 (17%)

Query: 34  ASGHFASALVRRLLLR--GYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHS 91
           A+G     ++  L+       + A + N  K Q +  + I         V QAD  D  +
Sbjct: 7   ATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGI--------TVRQADYGDEAA 58

Query: 92  LVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTA 151
           L +AL+G   L       S                  NV+ A      V  + +TS L A
Sbjct: 59  LTSALQGVEKLLLI----SSSEVGQRAP------QHRNVINAAKAAG-VKFIAYTSLLHA 107

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 41.5 bits (97), Expect = 1e-04
 Identities = 25/160 (15%), Positives = 57/160 (35%), Gaps = 18/160 (11%)

Query: 29  VCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFD 88
           + ++ A+G   S ++     RG+ V A + N GK+    ++         + + Q D FD
Sbjct: 3   IGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKD---------INILQKDIFD 53

Query: 89  YHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSS 148
               ++ L   + +  ++    D        AE    +  +++     T +   +V   +
Sbjct: 54  --LTLSDLSDQNVVVDAYGISPDE-------AEKHVTSLDHLISVLNGTVSPRLLVVGGA 104

Query: 149 LTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSK 188
            +  +  +      S    E  +      +  +L H  S 
Sbjct: 105 ASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSH 144

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 41.5 bits (97), Expect = 1e-04
 Identities = 19/129 (14%), Positives = 42/129 (32%), Gaps = 22/129 (17%)

Query: 23  SNA-TKTVCVMDASGHFASALVRRLLLR-GYTVHAALHNHGKLQCIEEELINYNEEKKLK 80
           SNA    + ++ A+G  A  L   LL      +             E       + +++ 
Sbjct: 1   SNAMYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEII-----DHERVT 55

Query: 81  VFQADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTV 140
           V +    +   L  A+     +F              + A        ++++A ++ N +
Sbjct: 56  VIEGSFQNPGXLEQAVTNAEVVF--------------VGAMESGSDMASIVKALSRXN-I 100

Query: 141 DKVVFTSSL 149
            +V+  S  
Sbjct: 101 RRVIGVSMA 109

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 27/152 (17%), Positives = 48/152 (31%), Gaps = 24/152 (15%)

Query: 27  KTVCVMDASGHFASALVRRLLLRGYTVHAALHNH--GKLQCIEE--ELINYNEEKKLKVF 82
           KT  +   +G   S L+ +LL     V   L N   G    ++E   L++  +  +    
Sbjct: 26  KTWLITGVAGFIGSNLLEKLLKLNQVV-IGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFI 84

Query: 83  QADPFDYHSLVNALKGCSGLF---------YSFEPPSDHSTYDELTAEVETMAAHNVLEA 133
           + D  D  +    +KG   +           S   P         T         N+L A
Sbjct: 85  EGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDP-------ITTNATNITGFLNILHA 137

Query: 134 CAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHD 165
                 V    + +S  +  + +H   P   +
Sbjct: 138 AKNAQ-VQSFTYAAS--SSTYGDHPALPKVEE 166

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 40.0 bits (93), Expect = 4e-04
 Identities = 22/140 (15%), Positives = 41/140 (29%), Gaps = 18/140 (12%)

Query: 29  VCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFD 88
           + V+ A+G   SA+V     RG+ V A + +  K            +     V       
Sbjct: 3   IAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAA----------DRLGATVATLVKEP 52

Query: 89  YHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSS 148
                  L     +  +   P            +    A +++     ++    V    S
Sbjct: 53  LVLTEADLDSVDAVVDALSVPWGSG-----RGYLHLDFATHLVSLLRNSD-TLAVFILGS 106

Query: 149 LTAVVWNNHRDNPTSHDFDE 168
            +  +     D+P   DF E
Sbjct: 107 ASLAMP--GADHPMILDFPE 124

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	294
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	100.0
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	100.0
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	100.0
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	100.0
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	100.0
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	100.0
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	100.0
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	100.0
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	100.0
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	100.0
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	100.0
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	100.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	100.0
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	100.0
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	100.0
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	100.0
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	100.0
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	100.0
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	100.0
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	100.0
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	100.0
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	100.0
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	100.0
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	100.0
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	100.0
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	100.0
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	100.0
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	100.0
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	100.0
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	100.0
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	100.0
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	100.0
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	100.0
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	100.0
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	100.0
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	100.0
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	100.0
4f6c_A	427	AUSA reductase domain protein; thioester reductase	100.0
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	100.0
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	100.0
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	100.0
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	100.0
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	100.0
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	100.0
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	100.0
4f6l_B	508	AUSA reductase domain protein; thioester reductase	100.0
1xq6_A	253	Unknown protein; structural genomics, protein stru	100.0
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	100.0
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	100.0
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.98
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.98
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.98
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.97
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.97
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.97
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.97
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.97
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.97
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.97
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.97
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.96
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.96
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.96
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.96
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.96
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.95
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.95
1spx_A	278	Short-chain reductase family member (5L265); paral	99.95
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.95
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.95
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.95
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.95
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.95
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.95
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.95
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.95
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.95
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.95
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.95
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.95
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.95
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.95
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.95
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.95
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.95
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.95
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.94
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.94
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.94
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.94
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.94
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.94
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.94
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.94
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.94
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.94
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.94
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.94
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.94
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.94
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.94
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.94
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.94
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.94
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.94
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.94
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.94
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.94
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.94
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.94
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.94
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.94
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.94
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.94
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.94
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.94
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.94
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.94
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.94
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.94
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.94
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.94
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.94
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.94
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.94
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.94
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.94
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.94
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.94
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.94
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.94
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.94
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.94
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.94
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.94
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.94
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.94
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.94
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.94
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.94
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.94
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.94
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.94
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.94
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.94
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.94
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.93
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.93
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.93
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.93
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.93
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.93
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.93
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.93
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.93
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.93
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.93
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.93
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.93
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.93
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.93
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.93
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.93
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.93
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.93
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.93
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.93
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.93
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.93
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.93
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.93
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.93
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.93
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.93
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.93
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.93
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.93
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.93
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.93
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.93
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.93
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.93
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.93
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.93
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.93
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.93
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.93
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.93
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.93
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.93
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.93
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.93
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.93
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.93
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.93
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.93
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.93
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.93
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.93
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.93
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.93
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.93
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.93
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.93
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.93
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.93
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.93
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.92
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.92
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.92
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.92
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.92
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.92
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.92
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.92
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.92
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.92
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.92
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.92
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.92
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.92
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.92
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.92
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.92
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.92
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.92
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.92
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.92
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.92
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.92
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.92
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.92
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.92
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.92
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.92
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.92
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.92
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.92
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.91
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.91
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.91
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.91
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.91
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.91
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.91
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.91
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.91
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.91
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.91
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.91
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.91
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.91
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.91
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.91
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.91
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.91
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.91
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.9
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.9
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.9
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.9
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.9
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.9
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.89
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.89
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.89
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.88
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.87
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.87
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.86
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.86
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.86
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.85
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.83
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.82
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.81
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.8
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.78
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.77
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.76
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.72
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.7
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.69
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.67
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.65
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.64
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.61
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.61
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.6
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.46
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	99.44
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.42
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.41
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	99.35
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	99.19
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	99.17
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	99.06
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.05
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	99.04
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.95
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.94
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.93
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.9
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.83
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	98.82
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.81
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.79
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.71
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.65
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.63
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.61
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.6
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.56
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.56
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.51
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	98.48
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	98.41
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.38
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	98.34
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	98.32
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	98.26
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	98.25
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	98.25
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	98.25
3tl2_A	315	Malate dehydrogenase; center for structural genomi	98.21
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	98.21
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	98.21
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	98.2
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	98.18
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	98.17
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	98.16
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	98.15
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.13
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	98.12
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.12
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	98.1
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	98.09
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.09
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	98.06
4g65_A	461	TRK system potassium uptake protein TRKA; structur	98.05
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	98.04
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	98.04
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.03
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.03
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.96
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.96
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.96
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	97.94
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.94
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.93
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.93
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	97.92
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	97.88
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	97.88
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	97.87
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.86
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	97.86
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.85
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.85
1lnq_A	336	MTHK channels, potassium channel related protein;	97.83
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	97.79
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	97.79
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.78
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.76
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.76
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.76
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	97.75
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.74
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	97.73
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.73
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	97.72
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.71
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.7
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.7
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.7
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.69
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.69
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.68
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	97.68
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	97.68
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.67
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.65
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	97.65
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	97.64
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.64
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.61
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.6
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.59
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	97.59
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.57
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.55
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	97.54
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	97.54
3qha_A	296	Putative oxidoreductase; seattle structural genomi	97.54
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.54
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.53
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	97.53
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	97.53
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.53
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.52
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.51
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	97.51
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	97.51
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	97.5
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.47
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.44
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	97.42
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	97.41
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	97.41
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	97.4
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.4
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	97.39
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	97.39
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	97.38
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	97.38
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	97.38
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.38
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	97.37
3vtf_A	444	UDP-glucose 6-dehydrogenase; two discrete alpha/be	97.37
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	97.37
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.36
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	97.34
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	97.34
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.34
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.34
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.33
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	97.33
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	97.33
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	97.32
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	97.32
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.31
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	97.31
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	97.28
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	97.27
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.27
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.27
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.26
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.26
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.25
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	97.25
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	97.25
4gwg_A	484	6-phosphogluconate dehydrogenase, decarboxylating;	97.24
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.22
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	97.22
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	97.22
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	97.22
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.21
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.21
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.21
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.2
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	97.2
4ffl_A	363	PYLC; amino acid, biosynthesis of pyrrolysine, iso	97.2
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	97.2
2o3j_A	481	UDP-glucose 6-dehydrogenase; structural genomics,	97.19
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	97.19
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	97.19
4ezb_A	317	Uncharacterized conserved protein; structural geno	97.19
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	97.19
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	97.18
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.18
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	97.18
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.16
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	97.14
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	97.13
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.13
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	97.13
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.13
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	97.11
1oi7_A	288	Succinyl-COA synthetase alpha chain; SCS, ligase,	97.1
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	97.1
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.09
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	97.09
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.08
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	97.06
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.06
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	97.04

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=1.4e-39  Score=278.92  Aligned_cols=237  Identities=12%  Similarity=0.158  Sum_probs=195.9

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEec
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYS  105 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~  105 (294)
                      +|+|||||||||||++|++.|+++|++|++++|++....  .         .+++++.+|++ .+.+.++++++|+|||+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~---------~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~   69 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA--I---------NDYEYRVSDYT-LEDLINQLNDVDAVVHL   69 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC----------------CCEEEECCCC-HHHHHHHTTTCSEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc--C---------CceEEEEcccc-HHHHHHhhcCCCEEEEc
Confidence            589999999999999999999999999999999843322  1         27899999999 99999999999999999


Q ss_pred             CCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhH
Q 043792          106 FEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHG  185 (294)
Q Consensus       106 a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~  185 (294)
                      |+.....  .....+++|+.++.+++++|++. +++||||+||.+  +|+...    ..+++|+++..+.      +.|+
T Consensus        70 a~~~~~~--~~~~~~~~n~~~~~~ll~a~~~~-~~~r~v~~SS~~--vyg~~~----~~~~~E~~~~~p~------~~Y~  134 (311)
T 3m2p_A           70 AATRGSQ--GKISEFHDNEILTQNLYDACYEN-NISNIVYASTIS--AYSDET----SLPWNEKELPLPD------LMYG  134 (311)
T ss_dssp             CCCCCSS--SCGGGTHHHHHHHHHHHHHHHHT-TCCEEEEEEEGG--GCCCGG----GCSBCTTSCCCCS------SHHH
T ss_pred             cccCCCC--ChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEccHH--HhCCCC----CCCCCCCCCCCCC------chhH
Confidence            9986654  44578899999999999999999 899999999986  455443    4588999887776      8999


Q ss_pred             hhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-------cccccc-cccCCC--ccccccHHHHHHHHHhhhc
Q 043792          186 LSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-------YLKGAA-EMYEDG--VMASVDLRFYVDAHICVFE  255 (294)
Q Consensus       186 ~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-------~~~~~~-~~~~~~--~~~~v~v~D~a~~i~~~~~  255 (294)
                      .+|.++|++++.++.+.+++++++||+++|||.......       +..+.. .+++++  ...|+|++|+|++++.+++
T Consensus       135 ~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~  214 (311)
T 3m2p_A          135 VSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALK  214 (311)
T ss_dssp             HHHHHHHHHHHHHHHHSCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHcCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHh
Confidence            999999999999999899999999999999998653221       333444 344444  4459999999999999998


Q ss_pred             CcCCCCeEEee-cccccHHHHHHHHHHHhCCCCCC
Q 043792          256 DVSSYGRYLCF-NHVINCNEDAMKLARMLLPPSDT  289 (294)
Q Consensus       256 ~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~  289 (294)
                      ++..++.|++. ++.+++.|+++.+++.+|.+.++
T Consensus       215 ~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  249 (311)
T 3m2p_A          215 QEKVSGTFNIGSGDALTNYEVANTINNAFGNKDNL  249 (311)
T ss_dssp             CTTCCEEEEECCSCEECHHHHHHHHHHHTTCTTCE
T ss_pred             cCCCCCeEEeCCCCcccHHHHHHHHHHHhCCCCcc
Confidence            87655568665 56799999999999999987543

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=2.4e-39  Score=282.08  Aligned_cols=250  Identities=17%  Similarity=0.081  Sum_probs=198.6

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhcc---CCCCeEEEECCCCChhHHHHHhccCC
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYN---EEKKLKVFQADPFDYHSLVNALKGCS  100 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~---~~~~v~~~~~Dl~~~~~~~~~~~~~d  100 (294)
                      .++|+|||||||||||++|++.|+++|++|++++|+..........+....   ...+++++.+|+.|.+.+.++++++|
T Consensus        23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d  102 (351)
T 3ruf_A           23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVD  102 (351)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCS
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCC
Confidence            346899999999999999999999999999999997764332222110000   00589999999999999999999999


Q ss_pred             EEEecCCCCCCCC--cchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhh
Q 043792          101 GLFYSFEPPSDHS--TYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCK  178 (294)
Q Consensus       101 ~Vih~a~~~~~~~--~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~  178 (294)
                      +|||+|+......  ......+++|+.++.+++++|++. ++++|||+||.+  +|+...    ..+++|+.+..+.   
T Consensus       103 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~SS~~--vyg~~~----~~~~~E~~~~~p~---  172 (351)
T 3ruf_A          103 HVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNA-QVQSFTYAASSS--TYGDHP----ALPKVEENIGNPL---  172 (351)
T ss_dssp             EEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGG--GGTTCC----CSSBCTTCCCCCC---
T ss_pred             EEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEecHH--hcCCCC----CCCCccCCCCCCC---
Confidence            9999999754221  123377899999999999999999 899999999986  555544    4588999988776   


Q ss_pred             hccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-----------cccccc-cccCCC--ccccccHH
Q 043792          179 KFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-----------YLKGAA-EMYEDG--VMASVDLR  244 (294)
Q Consensus       179 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-----------~~~~~~-~~~~~~--~~~~v~v~  244 (294)
                         +.|+.+|.++|.+++.++.+++++++++||+++|||.......           +..+.. .+++++  ...|+|++
T Consensus       173 ---~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~  249 (351)
T 3ruf_A          173 ---SPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYID  249 (351)
T ss_dssp             ---SHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHH
T ss_pred             ---ChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHH
Confidence               8999999999999999998889999999999999998654311           233444 344544  34599999


Q ss_pred             HHHHHHHhhhcC-cCCCC-eEEee-cccccHHHHHHHHHHHhCCC
Q 043792          245 FYVDAHICVFED-VSSYG-RYLCF-NHVINCNEDAMKLARMLLPP  286 (294)
Q Consensus       245 D~a~~i~~~~~~-~~~~~-~~~~~-~~~~s~~~~~~~~~~~~~~~  286 (294)
                      |+|++++.++.. +...+ .|+++ ++.+++.|+++.+.+.+|..
T Consensus       250 Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~  294 (351)
T 3ruf_A          250 NVIQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLI  294 (351)
T ss_dssp             HHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCcc
Confidence            999999999887 33334 58665 56799999999999999873

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=3e-39  Score=280.88  Aligned_cols=253  Identities=14%  Similarity=0.051  Sum_probs=195.9

Q ss_pred             CCCCCCCCeEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCC--ChhhHHHHHhhccCCCCeEEEECCCCChhHHHHH
Q 043792           20 YDSSNATKTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHG--KLQCIEEELINYNEEKKLKVFQADPFDYHSLVNA   95 (294)
Q Consensus        20 ~~~~~~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~--~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~   95 (294)
                      .++..++|+|||||||||||++|+++|+++|  ++|++++|...  ....+..    .....+++++.+|++|.+.+.++
T Consensus        18 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~Dl~d~~~~~~~   93 (346)
T 4egb_A           18 LYFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKS----IQDHPNYYFVKGEIQNGELLEHV   93 (346)
T ss_dssp             ------CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTT----TTTCTTEEEEECCTTCHHHHHHH
T ss_pred             cccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhh----hccCCCeEEEEcCCCCHHHHHHH
Confidence            3445667899999999999999999999999  77888887642  2222221    12235899999999999999999


Q ss_pred             hcc--CCEEEecCCCCCCCC--cchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCC
Q 043792           96 LKG--CSGLFYSFEPPSDHS--TYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNW  171 (294)
Q Consensus        96 ~~~--~d~Vih~a~~~~~~~--~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~  171 (294)
                      +++  +|+|||+|+......  ......+++|+.++.+++++|++. ++++|||+||.+  +|+...   ...+++|+++
T Consensus        94 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~SS~~--vy~~~~---~~~~~~E~~~  167 (346)
T 4egb_A           94 IKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKY-PHIKLVQVSTDE--VYGSLG---KTGRFTEETP  167 (346)
T ss_dssp             HHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHS-TTSEEEEEEEGG--GGCCCC---SSCCBCTTSC
T ss_pred             HhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEeCchH--HhCCCC---cCCCcCCCCC
Confidence            987  999999999765432  233488999999999999999999 899999999986  444431   1347899988


Q ss_pred             CChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-------cccccc-cccCCCc--cccc
Q 043792          172 SDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-------YLKGAA-EMYEDGV--MASV  241 (294)
Q Consensus       172 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-------~~~~~~-~~~~~~~--~~~v  241 (294)
                      ..+.      +.|+.+|.++|.+++.++.+++++++++||+++|||.......       +.++.+ .+++++.  ..||
T Consensus       168 ~~p~------~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  241 (346)
T 4egb_A          168 LAPN------SPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWL  241 (346)
T ss_dssp             CCCC------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEE
T ss_pred             CCCC------ChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeE
Confidence            8777      8999999999999999998889999999999999998643321       334444 4445543  4599


Q ss_pred             cHHHHHHHHHhhhcCcCCCCeEEeec-ccccHHHHHHHHHHHhCCCCC
Q 043792          242 DLRFYVDAHICVFEDVSSYGRYLCFN-HVINCNEDAMKLARMLLPPSD  288 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~  288 (294)
                      |++|+|++++.+++++..++.|++++ +.+++.|+++.+.+.+|.+.+
T Consensus       242 ~v~Dva~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  289 (346)
T 4egb_A          242 HVTDHCSAIDVVLHKGRVGEVYNIGGNNEKTNVEVVEQIITLLGKTKK  289 (346)
T ss_dssp             EHHHHHHHHHHHHHHCCTTCEEEECCSCCEEHHHHHHHHHHHHTCCGG
T ss_pred             EHHHHHHHHHHHHhcCCCCCEEEECCCCceeHHHHHHHHHHHhCCCcc
Confidence            99999999999998877555687765 569999999999999997643

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.3e-38  Score=276.35  Aligned_cols=247  Identities=19%  Similarity=0.157  Sum_probs=188.9

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      ++|+||||||+||||++|++.|+++|++|++++|+..+.+.+..        .+++++.+|++|.+++.++++++|+|||
T Consensus        12 ~~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~--------~~~~~~~~Dl~d~~~~~~~~~~~d~vih   83 (342)
T 2x4g_A           12 AHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAY--------LEPECRVAEMLDHAGLERALRGLDGVIF   83 (342)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGG--------GCCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhcc--------CCeEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            34699999999999999999999999999999998776544322        2789999999999999999999999999


Q ss_pred             cCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchh
Q 043792          105 SFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWH  184 (294)
Q Consensus       105 ~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y  184 (294)
                      +|+............+++|+.++.+++++|.+. ++++|||+||.++  |+...  ....+ +|+++..+...  ..+.|
T Consensus        84 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~--~~~~~--~~~~~-~E~~~~~p~~~--~~~~Y  155 (342)
T 2x4g_A           84 SAGYYPSRPRRWQEEVASALGQTNPFYAACLQA-RVPRILYVGSAYA--MPRHP--QGLPG-HEGLFYDSLPS--GKSSY  155 (342)
T ss_dssp             C------------CHHHHHHHHHHHHHHHHHHH-TCSCEEEECCGGG--SCCCT--TSSCB-CTTCCCSSCCT--TSCHH
T ss_pred             CCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEECCHHh--hCcCC--CCCCC-CCCCCCCcccc--ccChH
Confidence            999765433344578999999999999999999 8899999999864  44322  00134 78887766100  01789


Q ss_pred             HhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCC-CCCCc-----cccccccccCCCccccccHHHHHHHHHhhhcCcC
Q 043792          185 GLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDV-TISNP-----YLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVS  258 (294)
Q Consensus       185 ~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~-~~~~~-----~~~~~~~~~~~~~~~~v~v~D~a~~i~~~~~~~~  258 (294)
                      +.+|.++|.+++.++.+ +++++++||+++||+.. .....     +..+.....++....|+|++|+|++++.+++++.
T Consensus       156 ~~sK~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  234 (342)
T 2x4g_A          156 VLCKWALDEQAREQARN-GLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGR  234 (342)
T ss_dssp             HHHHHHHHHHHHHHHHT-TCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCCCEEECCEEEEEEHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHHhhc-CCcEEEEeCCceECCCCccccHHHHHHHHHcCCCccccCCCcceeeHHHHHHHHHHHHhCCC
Confidence            99999999999998877 99999999999999985 21111     2234432225566669999999999999998766


Q ss_pred             CCCeEEeecccccHHHHHHHHHHHhCCCCC
Q 043792          259 SYGRYLCFNHVINCNEDAMKLARMLLPPSD  288 (294)
Q Consensus       259 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~  288 (294)
                      .++.|++.++.+++.|+++.+.+.+|.+..
T Consensus       235 ~g~~~~v~~~~~s~~e~~~~i~~~~g~~~~  264 (342)
T 2x4g_A          235 IGERYLLTGHNLEMADLTRRIAELLGQPAP  264 (342)
T ss_dssp             TTCEEEECCEEEEHHHHHHHHHHHHTCCCC
T ss_pred             CCceEEEcCCcccHHHHHHHHHHHhCCCCC
Confidence            555687765449999999999999987654

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=7e-39  Score=278.67  Aligned_cols=241  Identities=18%  Similarity=0.120  Sum_probs=195.2

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ..++|+|||||||||||++|++.|+++|++|++++|+...              .++.++.+|++|.+.+.++++++|+|
T Consensus        16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~--------------~~~~~~~~Dl~d~~~~~~~~~~~d~v   81 (347)
T 4id9_A           16 PRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG--------------TGGEEVVGSLEDGQALSDAIMGVSAV   81 (347)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS--------------SCCSEEESCTTCHHHHHHHHTTCSEE
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC--------------CCccEEecCcCCHHHHHHHHhCCCEE
Confidence            4567899999999999999999999999999999998653              26889999999999999999999999


Q ss_pred             EecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccc
Q 043792          103 FYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL  182 (294)
Q Consensus       103 ih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  182 (294)
                      ||+|+.........+..+++|+.++.+++++|++. ++++|||+||.+  +|+...  +...+++|+.+..+.      +
T Consensus        82 ih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~V~~SS~~--vyg~~~--~~~~~~~E~~~~~~~------~  150 (347)
T 4id9_A           82 LHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAA-GVRRFVFASSGE--VYPENR--PEFLPVTEDHPLCPN------S  150 (347)
T ss_dssp             EECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGG--GTTTTS--CSSSSBCTTSCCCCC------S
T ss_pred             EECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEECCHH--HhCCCC--CCCCCcCCCCCCCCC------C
Confidence            99999876655555689999999999999999998 899999999986  555421  114578999887776      8


Q ss_pred             hhHhhHHHHHHHHHHHHHhcCCeEEEEecCcee-------------CCCCCCC----------Cc--------cccccc-
Q 043792          183 WHGLSKTLAEKTAWALAMDRGISMVSINGGLVM-------------GPDVTIS----------NP--------YLKGAA-  230 (294)
Q Consensus       183 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~-------------G~~~~~~----------~~--------~~~~~~-  230 (294)
                      .|+.+|.++|++++.++.+.+++++++||+++|             ||.....          ..        +..+.+ 
T Consensus       151 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (347)
T 4id9_A          151 PYGLTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPS  230 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCC
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCe
Confidence            999999999999999999999999999999999             7763211          00        233443 


Q ss_pred             cccCCC--cccc----ccHHHHHHHHHhhhcCcCC-CCeEEee-cccccHHHHHHHHHHHhCCCCC
Q 043792          231 EMYEDG--VMAS----VDLRFYVDAHICVFEDVSS-YGRYLCF-NHVINCNEDAMKLARMLLPPSD  288 (294)
Q Consensus       231 ~~~~~~--~~~~----v~v~D~a~~i~~~~~~~~~-~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~  288 (294)
                      .+++++  ...|    +|++|+|++++.+++++.. ++.|++. ++.+++.|+++.+++.+|.+..
T Consensus       231 ~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~  296 (347)
T 4id9_A          231 HILARNENGRPFRMHITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPIV  296 (347)
T ss_dssp             EEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCEE
T ss_pred             EEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCCCc
Confidence            344333  3347    9999999999999998744 4458765 5679999999999999987654

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=2.2e-38  Score=271.70  Aligned_cols=240  Identities=16%  Similarity=0.129  Sum_probs=189.8

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEec-CCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALH-NHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      ||+|||||||||||++|++.|+++| .++++++ +....+.+         ..+++++.+|++| +++.++++++|+|||
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~---------~~~~~~~~~Dl~~-~~~~~~~~~~d~vih   69 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFV---------NEAARLVKADLAA-DDIKDYLKGAEEVWH   69 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGS---------CTTEEEECCCTTT-SCCHHHHTTCSEEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhc---------CCCcEEEECcCCh-HHHHHHhcCCCEEEE
Confidence            5799999999999999999999999 4555554 43332221         3478999999999 889999999999999


Q ss_pred             cCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccc
Q 043792          105 SFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL  182 (294)
Q Consensus       105 ~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  182 (294)
                      +|+.....  .......+++|+.++.++++++++. ++++|||+||.+  +|+...    ..+++|+.+..+.      +
T Consensus        70 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~iv~~SS~~--vyg~~~----~~~~~E~~~~~~~------~  136 (313)
T 3ehe_A           70 IAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKA-GVSRIVFTSTST--VYGEAK----VIPTPEDYPTHPI------S  136 (313)
T ss_dssp             CCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEECCGG--GGCSCS----SSSBCTTSCCCCC------S
T ss_pred             CCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeCchH--HhCcCC----CCCCCCCCCCCCC------C
Confidence            99865432  3344588999999999999999999 889999999986  555544    5578888877766      8


Q ss_pred             hhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc------cccc-cc-cccCCCc--cccccHHHHHHHHHh
Q 043792          183 WHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP------YLKG-AA-EMYEDGV--MASVDLRFYVDAHIC  252 (294)
Q Consensus       183 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~------~~~~-~~-~~~~~~~--~~~v~v~D~a~~i~~  252 (294)
                      .|+.+|.++|.+++.++.+++++++++||+++|||.......      +..+ .. ..++++.  ..|+|++|+|++++.
T Consensus       137 ~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~  216 (313)
T 3ehe_A          137 LYGASKLACEALIESYCHTFDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLF  216 (313)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHH
Confidence            999999999999999999999999999999999998543211      2233 22 3455544  459999999999999


Q ss_pred             hhcCcCCCCeEEee-cccccHHHHHHHHHHHhCCCCCC
Q 043792          253 VFEDVSSYGRYLCF-NHVINCNEDAMKLARMLLPPSDT  289 (294)
Q Consensus       253 ~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~  289 (294)
                      +++....++.|++. ++++++.|+++.+++.+|.+.++
T Consensus       217 ~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~  254 (313)
T 3ehe_A          217 GLRGDERVNIFNIGSEDQIKVKRIAEIVCEELGLSPRF  254 (313)
T ss_dssp             HTTCCSSEEEEECCCSCCEEHHHHHHHHHHHTTCCCEE
T ss_pred             HhccCCCCceEEECCCCCeeHHHHHHHHHHHhCCCCce
Confidence            99855444568765 46799999999999999876543

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=1.9e-38  Score=278.44  Aligned_cols=251  Identities=16%  Similarity=0.194  Sum_probs=195.3

Q ss_pred             CCCCCCeEEEeCCCchHHHHHHHHHHHC-CCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCC-ChhHHHHHhccC
Q 043792           22 SSNATKTVCVMDASGHFASALVRRLLLR-GYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPF-DYHSLVNALKGC   99 (294)
Q Consensus        22 ~~~~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~-~~~~~~~~~~~~   99 (294)
                      ..++||+|||||||||||++|++.|+++ |++|++++|+.++...+..       ..+++++.+|++ |.+.+.++++++
T Consensus        20 ~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-------~~~v~~~~~Dl~~d~~~~~~~~~~~   92 (372)
T 3slg_A           20 GSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK-------HERMHFFEGDITINKEWVEYHVKKC   92 (372)
T ss_dssp             ---CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG-------STTEEEEECCTTTCHHHHHHHHHHC
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc-------CCCeEEEeCccCCCHHHHHHHhccC
Confidence            3456789999999999999999999998 9999999998766544322       258999999999 999999999999


Q ss_pred             CEEEecCCCCCCCC--cchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChh-h
Q 043792          100 SGLFYSFEPPSDHS--TYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVN-L  176 (294)
Q Consensus       100 d~Vih~a~~~~~~~--~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~-~  176 (294)
                      |+|||+|+......  ......+++|+.++.+++++|++. + ++|||+||.+  +|+...    ..+++|+++.... +
T Consensus        93 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~-~~~v~~SS~~--vyg~~~----~~~~~e~~~~~~~~p  164 (372)
T 3slg_A           93 DVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPSTSE--VYGMCA----DEQFDPDASALTYGP  164 (372)
T ss_dssp             SEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHH-T-CEEEEECCGG--GGBSCC----CSSBCTTTCCEEECC
T ss_pred             CEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHh-C-CcEEEeCcHH--HhCCCC----CCCCCccccccccCC
Confidence            99999999765322  223477899999999999999999 7 8999999986  555544    4467777654211 1


Q ss_pred             hhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCC-------Cc--------cccccc-cccCC--Ccc
Q 043792          177 CKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTIS-------NP--------YLKGAA-EMYED--GVM  238 (294)
Q Consensus       177 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~-------~~--------~~~~~~-~~~~~--~~~  238 (294)
                      ...+.+.|+.+|.++|++++.++.+ +++++++||+++|||.....       ..        +.++.. .++++  ...
T Consensus       165 ~~~p~~~Y~~sK~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  243 (372)
T 3slg_A          165 INKPRWIYACSKQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKR  243 (372)
T ss_dssp             TTCTTHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEE
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEE
Confidence            1112268999999999999999888 99999999999999986421       00        234444 34443  344


Q ss_pred             ccccHHHHHHHHHhhhcCcC--C-CCeEEeec--ccccHHHHHHHHHHHhCCCCC
Q 043792          239 ASVDLRFYVDAHICVFEDVS--S-YGRYLCFN--HVINCNEDAMKLARMLLPPSD  288 (294)
Q Consensus       239 ~~v~v~D~a~~i~~~~~~~~--~-~~~~~~~~--~~~s~~~~~~~~~~~~~~~~~  288 (294)
                      .|+|++|+|++++.+++++.  . ++.|++++  +.+|+.|+++.+.+.+|.+.+
T Consensus       244 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~  298 (372)
T 3slg_A          244 AFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPE  298 (372)
T ss_dssp             ECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTT
T ss_pred             EEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcc
Confidence            59999999999999998874  3 44587766  489999999999999986543

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=3.3e-38  Score=270.46  Aligned_cols=240  Identities=21%  Similarity=0.188  Sum_probs=191.2

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEecC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSF  106 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~a  106 (294)
                      |+|||||||||||++|++.|+++|++|++++|+........        ..+++++.+|+.|.+ +.+++++ |+|||+|
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A   70 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV--------NPSAELHVRDLKDYS-WGAGIKG-DVVFHFA   70 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS--------CTTSEEECCCTTSTT-TTTTCCC-SEEEECC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc--------CCCceEEECccccHH-HHhhcCC-CEEEECC
Confidence            68999999999999999999999999999999775533221        347899999999998 8888887 9999999


Q ss_pred             CCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchh
Q 043792          107 EPPSDH--STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWH  184 (294)
Q Consensus       107 ~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y  184 (294)
                      +.....  .......+++|+.++.++++++++. ++++|||+||.+  +|+...    ..+++|+.+..+.      +.|
T Consensus        71 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~--vyg~~~----~~~~~e~~~~~p~------~~Y  137 (312)
T 3ko8_A           71 ANPEVRLSTTEPIVHFNENVVATFNVLEWARQT-GVRTVVFASSST--VYGDAD----VIPTPEEEPYKPI------SVY  137 (312)
T ss_dssp             SSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGG--GGCSCS----SSSBCTTSCCCCC------SHH
T ss_pred             CCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeCcHH--HhCCCC----CCCCCCCCCCCCC------ChH
Confidence            965432  2234478899999999999999999 889999999986  555544    4578898877776      899


Q ss_pred             HhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc------cccccc--cccCCCc--cccccHHHHHHHHHhhh
Q 043792          185 GLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP------YLKGAA--EMYEDGV--MASVDLRFYVDAHICVF  254 (294)
Q Consensus       185 ~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~------~~~~~~--~~~~~~~--~~~v~v~D~a~~i~~~~  254 (294)
                      +.+|.++|.+++.++.+.+++++++||+++|||.......      +..+..  ..++++.  ..|+|++|+|++++.++
T Consensus       138 ~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~  217 (312)
T 3ko8_A          138 GAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAW  217 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHH
Confidence            9999999999999999899999999999999998543211      222322  3455543  45999999999999999


Q ss_pred             cC---cCC-CCeEEee-cccccHHHHHHHHHHHhCCCCCC
Q 043792          255 ED---VSS-YGRYLCF-NHVINCNEDAMKLARMLLPPSDT  289 (294)
Q Consensus       255 ~~---~~~-~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~  289 (294)
                      ++   ... ++.|++. ++.+++.|+++.+.+.+|.+.++
T Consensus       218 ~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~  257 (312)
T 3ko8_A          218 KKFEEMDAPFLALNVGNVDAVRVLDIAQIVAEVLGLRPEI  257 (312)
T ss_dssp             HHHHHSCCSEEEEEESCSSCEEHHHHHHHHHHHHTCCCEE
T ss_pred             HhccccCCCCcEEEEcCCCceeHHHHHHHHHHHhCCCCce
Confidence            87   333 3357765 46799999999999999876543

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=1.6e-37  Score=271.66  Aligned_cols=245  Identities=17%  Similarity=0.074  Sum_probs=194.6

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHH--CCCeEEEEecCCCChhh-------HHHHHhhccCCCCeEEEECCCCChhHHH
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLL--RGYTVHAALHNHGKLQC-------IEEELINYNEEKKLKVFQADPFDYHSLV   93 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~--~g~~V~~~~r~~~~~~~-------l~~~~~~~~~~~~v~~~~~Dl~~~~~~~   93 (294)
                      ..++|+||||||+||||++|++.|++  +|++|++++|+......       +...  ......++.++.+|++|.+.+.
T Consensus         7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~   84 (362)
T 3sxp_A            7 ELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHF--KNLIGFKGEVIAADINNPLDLR   84 (362)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCG--GGGTTCCSEEEECCTTCHHHHH
T ss_pred             hcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhh--hhccccCceEEECCCCCHHHHH
Confidence            45678999999999999999999999  99999999997641110       0000  0112346799999999999999


Q ss_pred             HH-hccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCC
Q 043792           94 NA-LKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWS  172 (294)
Q Consensus        94 ~~-~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~  172 (294)
                      ++ ..++|+|||||+.........+..+++|+.++.++++++++. +++ |||+||.+  +|+...    . +++|+.+.
T Consensus        85 ~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~~~-~V~~SS~~--vyg~~~----~-~~~E~~~~  155 (362)
T 3sxp_A           85 RLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSK-KAK-VIYASSAG--VYGNTK----A-PNVVGKNE  155 (362)
T ss_dssp             HHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHT-TCE-EEEEEEGG--GGCSCC----S-SBCTTSCC
T ss_pred             HhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHc-CCc-EEEeCcHH--HhCCCC----C-CCCCCCCC
Confidence            98 789999999999766545556689999999999999999988 776 99999975  566544    4 78899887


Q ss_pred             ChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCC---c--------cccccc-cccCCC--cc
Q 043792          173 DVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISN---P--------YLKGAA-EMYEDG--VM  238 (294)
Q Consensus       173 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~---~--------~~~~~~-~~~~~~--~~  238 (294)
                      .|.      +.|+.+|.++|.+++.++.+  ++++++||+++|||+.....   .        +..+.+ ..++++  ..
T Consensus       156 ~p~------~~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  227 (362)
T 3sxp_A          156 SPE------NVYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLR  227 (362)
T ss_dssp             CCS------SHHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEE
T ss_pred             CCC------ChhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEE
Confidence            776      89999999999999998765  99999999999999864321   1        233444 333443  34


Q ss_pred             ccccHHHHHHHHHhhhcCcCCCCeEEee-cccccHHHHHHHHHHHhCCCCC
Q 043792          239 ASVDLRFYVDAHICVFEDVSSYGRYLCF-NHVINCNEDAMKLARMLLPPSD  288 (294)
Q Consensus       239 ~~v~v~D~a~~i~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~  288 (294)
                      .|+|++|+|++++.+++.+.. |.|++. ++++++.|+++.+++.++ +.+
T Consensus       228 ~~i~v~Dva~ai~~~~~~~~~-g~~~i~~~~~~s~~e~~~~i~~~~g-~~~  276 (362)
T 3sxp_A          228 DFVYIEDVIQANVKAMKAQKS-GVYNVGYSQARSYNEIVSILKEHLG-DFK  276 (362)
T ss_dssp             ECEEHHHHHHHHHHHTTCSSC-EEEEESCSCEEEHHHHHHHHHHHHC-CCE
T ss_pred             ccEEHHHHHHHHHHHHhcCCC-CEEEeCCCCCccHHHHHHHHHHHcC-CCc
Confidence            599999999999999987764 488764 567999999999999999 544

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=100.00  E-value=2.2e-37  Score=268.26  Aligned_cols=254  Identities=33%  Similarity=0.465  Sum_probs=187.8

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      ++++||||||+||||++|+++|+++|++|++++|+.+....+...........+++++.+|++|.+++.++++++|+|||
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   83 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFH   83 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEEE
Confidence            56899999999999999999999999999999998765433322000110012588999999999999999999999999


Q ss_pred             cCCCCCCCCcch-hhhHhHhhHHHHHHHHHHHhcCC-CcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhh---h
Q 043792          105 SFEPPSDHSTYD-ELTAEVETMAAHNVLEACAQTNT-VDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCK---K  179 (294)
Q Consensus       105 ~a~~~~~~~~~~-~~~~~~n~~~~~~ll~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~---~  179 (294)
                      +|+......... ...+++|+.++.+++++|.+. + ++||||+||.++++.....    ..+++|+.+.......   .
T Consensus        84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~riV~~SS~~~~~~~~~~----~~~~~E~~~~~~~~~~~~~~  158 (337)
T 2c29_D           84 VATPMDFESKDPENEVIKPTIEGMLGIMKSCAAA-KTVRRLVFTSSAGTVNIQEHQ----LPVYDESCWSDMEFCRAKKM  158 (337)
T ss_dssp             CCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHH-SCCCEEEEECCGGGTSCSSSC----CSEECTTCCCCHHHHHHHCC
T ss_pred             eccccCCCCCChHHHHHHHHHHHHHHHHHHHHhC-CCccEEEEeeeHhhcccCCCC----CcccCcccCCchhhhcccCC
Confidence            998764322222 258899999999999999988 5 8999999998643322222    2357787655433210   1


Q ss_pred             ccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc--c------ccccccccCC-CccccccHHHHHHHH
Q 043792          180 FKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP--Y------LKGAAEMYED-GVMASVDLRFYVDAH  250 (294)
Q Consensus       180 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~--~------~~~~~~~~~~-~~~~~v~v~D~a~~i  250 (294)
                      +.+.|+.+|.++|.+++.++.+++++++++||++||||.......  +      ..|....+.. ....|+|++|+|+++
T Consensus       159 ~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~v~Dva~a~  238 (337)
T 2c29_D          159 TAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAH  238 (337)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHHTEEEEEEHHHHHHHH
T ss_pred             ccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccccccCCCCEEEHHHHHHHH
Confidence            225799999999999999887789999999999999998532211  0      1222212211 122399999999999


Q ss_pred             HhhhcCcCCCCeEEeecccccHHHHHHHHHHHh
Q 043792          251 ICVFEDVSSYGRYLCFNHVINCNEDAMKLARML  283 (294)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~  283 (294)
                      +.+++++...+.|+++++.+++.|+++.+.+.+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~  271 (337)
T 2c29_D          239 IYLFENPKAEGRYICSSHDCIILDLAKMLREKY  271 (337)
T ss_dssp             HHHHHCTTCCEEEEECCEEEEHHHHHHHHHHHC
T ss_pred             HHHhcCcccCceEEEeCCCCCHHHHHHHHHHHC
Confidence            999987655667888777899999999999876

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=5.7e-37  Score=265.97  Aligned_cols=251  Identities=15%  Similarity=0.062  Sum_probs=195.4

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCCEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCSGL  102 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~V  102 (294)
                      ++|+||||||+||||+++++.|+++|++|++++|+..........+. .....++.++.+|++|.+++.++++  ++|+|
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   82 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIE-KITGKTPAFHETDVSDERALARIFDAHPITAA   82 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHH-HHHSCCCEEECCCTTCHHHHHHHHHHSCCCEE
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHH-hhcCCCceEEEeecCCHHHHHHHHhccCCcEE
Confidence            45799999999999999999999999999999998766544332210 1123478999999999999999998  79999


Q ss_pred             EecCCCCCCCC--cchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhc
Q 043792          103 FYSFEPPSDHS--TYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKF  180 (294)
Q Consensus       103 ih~a~~~~~~~--~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~  180 (294)
                      ||+|+......  ......++.|+.++.++++++++. ++++|||+||.+  +|+...    ..+++|+.+..+.     
T Consensus        83 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~--~~g~~~----~~~~~e~~~~~~~-----  150 (341)
T 3enk_A           83 IHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRER-AVKRIVFSSSAT--VYGVPE----RSPIDETFPLSAT-----  150 (341)
T ss_dssp             EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGG--GBCSCS----SSSBCTTSCCBCS-----
T ss_pred             EECccccccCccccChHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEecce--EecCCC----CCCCCCCCCCCCC-----
Confidence            99999764321  122377899999999999999998 889999999986  455444    5578898887766     


Q ss_pred             cchhHhhHHHHHHHHHHHHHhcC-CeEEEEecCceeCCCCCC------C---Cc-------ccccc-c--cccC------
Q 043792          181 KLWHGLSKTLAEKTAWALAMDRG-ISMVSINGGLVMGPDVTI------S---NP-------YLKGA-A--EMYE------  234 (294)
Q Consensus       181 ~~~Y~~sK~~~e~~~~~~~~~~~-~~~~ilrp~~i~G~~~~~------~---~~-------~~~~~-~--~~~~------  234 (294)
                       +.|+.+|.++|.+++.++.+.+ ++++++||+++|||....      .   ..       ...+. .  ..++      
T Consensus       151 -~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  229 (341)
T 3enk_A          151 -NPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTP  229 (341)
T ss_dssp             -SHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSST
T ss_pred             -ChhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCC
Confidence             8999999999999999988876 999999999999996421      0   00       11121 1  2222      


Q ss_pred             CC--ccccccHHHHHHHHHhhhcCc---CCCCeEEee-cccccHHHHHHHHHHHhCCCCCC
Q 043792          235 DG--VMASVDLRFYVDAHICVFEDV---SSYGRYLCF-NHVINCNEDAMKLARMLLPPSDT  289 (294)
Q Consensus       235 ~~--~~~~v~v~D~a~~i~~~~~~~---~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~  289 (294)
                      ++  ...|+|++|+|++++.+++..   ..++.|++. ++.+++.|+++.+.+.+|.+.++
T Consensus       230 ~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~  290 (341)
T 3enk_A          230 DGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVPY  290 (341)
T ss_dssp             TSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCCCE
T ss_pred             CCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCcce
Confidence            33  345999999999999999762   334458775 56799999999999999977543

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=100.00  E-value=7.7e-37  Score=266.83  Aligned_cols=251  Identities=14%  Similarity=0.033  Sum_probs=193.6

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc--CCEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG--CSGL  102 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~V  102 (294)
                      ++|+||||||+||||++|++.|+++|++|++++|+......+...   .....++.++.+|++|.+.+.+++++  +|+|
T Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   84 (357)
T 1rkx_A            8 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFET---ARVADGMQSEIGDIRDQNKLLESIREFQPEIV   84 (357)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHH---TTTTTTSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHh---hccCCceEEEEccccCHHHHHHHHHhcCCCEE
Confidence            458999999999999999999999999999999987665544431   11245789999999999999999986  8999


Q ss_pred             EecCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhc
Q 043792          103 FYSFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKF  180 (294)
Q Consensus       103 ih~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~  180 (294)
                      ||+|+.....  .......+++|+.++.+++++|.+.+++++|||+||.+  +|+...   ...+++|+++..+.     
T Consensus        85 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~--vyg~~~---~~~~~~E~~~~~~~-----  154 (357)
T 1rkx_A           85 FHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDK--CYDNKE---WIWGYRENEAMGGY-----  154 (357)
T ss_dssp             EECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGG--GBCCCC---SSSCBCTTSCBCCS-----
T ss_pred             EECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHH--HhCCCC---cCCCCCCCCCCCCC-----
Confidence            9999964321  12234788999999999999999883388999999986  444332   01357777665555     


Q ss_pred             cchhHhhHHHHHHHHHHHHHhc---------CCeEEEEecCceeCCCCCCCCc--------cccccccccC--CCccccc
Q 043792          181 KLWHGLSKTLAEKTAWALAMDR---------GISMVSINGGLVMGPDVTISNP--------YLKGAAEMYE--DGVMASV  241 (294)
Q Consensus       181 ~~~Y~~sK~~~e~~~~~~~~~~---------~~~~~ilrp~~i~G~~~~~~~~--------~~~~~~~~~~--~~~~~~v  241 (294)
                       +.|+.+|.++|.+++.++.++         +++++++||+++|||.......        +.++.....+  +....|+
T Consensus       155 -~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v  233 (357)
T 1rkx_A          155 -DPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQ  233 (357)
T ss_dssp             -SHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCE
T ss_pred             -CccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeeccE
Confidence             889999999999999988764         9999999999999998542221        2234443332  2344599


Q ss_pred             cHHHHHHHHHhhhcC----c-CCCCeEEeec---ccccHHHHHHHHHHHhCCCCCC
Q 043792          242 DLRFYVDAHICVFED----V-SSYGRYLCFN---HVINCNEDAMKLARMLLPPSDT  289 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~----~-~~~~~~~~~~---~~~s~~~~~~~~~~~~~~~~~~  289 (294)
                      |++|+|++++.+++.    + ..++.|++++   +.+++.|+++.+.+.+|.+.++
T Consensus       234 ~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~  289 (357)
T 1rkx_A          234 HVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASW  289 (357)
T ss_dssp             ETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCE
T ss_pred             eHHHHHHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCcc
Confidence            999999999998874    1 3345688764   4799999999999999876544

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=2.3e-36  Score=263.33  Aligned_cols=252  Identities=15%  Similarity=0.046  Sum_probs=195.8

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCCh-hhHHHHHhhcc--CCCCeEEEECCCCChhHHHHHhccCC
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKL-QCIEEELINYN--EEKKLKVFQADPFDYHSLVNALKGCS  100 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~l~~~~~~~~--~~~~v~~~~~Dl~~~~~~~~~~~~~d  100 (294)
                      .++|+|||||||||||++|++.|+++|++|++++|+.... +.+........  ...+++++.+|++|.+++.++++++|
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d  104 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD  104 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCC
Confidence            3468999999999999999999999999999999976432 22221000000  02478999999999999999999999


Q ss_pred             EEEecCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhh
Q 043792          101 GLFYSFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCK  178 (294)
Q Consensus       101 ~Vih~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~  178 (294)
                      +|||+|+.....  .......+++|+.++.+++++|.+. ++++|||+||.+  +|+...    ..+++|+++..+.   
T Consensus       105 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~--~~~~~~----~~~~~E~~~~~~~---  174 (352)
T 1sb8_A          105 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYAASSS--TYGDHP----GLPKVEDTIGKPL---  174 (352)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGG--GGTTCC----CSSBCTTCCCCCC---
T ss_pred             EEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHH--hcCCCC----CCCCCCCCCCCCC---
Confidence            999999975421  1223478899999999999999998 889999999986  455443    4478898887666   


Q ss_pred             hccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCC---c--------cccccc-cccCCCc--cccccHH
Q 043792          179 KFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISN---P--------YLKGAA-EMYEDGV--MASVDLR  244 (294)
Q Consensus       179 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~---~--------~~~~~~-~~~~~~~--~~~v~v~  244 (294)
                         +.|+.+|.++|.+++.++.+.+++++++||+++|||......   .        +.++.+ .+++++.  ..|+|++
T Consensus       175 ---~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~  251 (352)
T 1sb8_A          175 ---SPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIE  251 (352)
T ss_dssp             ---SHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHH
T ss_pred             ---ChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHH
Confidence               899999999999999998888999999999999999864321   1        223443 3344443  4599999


Q ss_pred             HHHHHHHhhhcCc-CC-CCeEEee-cccccHHHHHHHHHHHh---CCCCC
Q 043792          245 FYVDAHICVFEDV-SS-YGRYLCF-NHVINCNEDAMKLARML---LPPSD  288 (294)
Q Consensus       245 D~a~~i~~~~~~~-~~-~~~~~~~-~~~~s~~~~~~~~~~~~---~~~~~  288 (294)
                      |+|++++.++... .. ++.|++. ++.+|+.|+++.+.+.+   |.+..
T Consensus       252 Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~  301 (352)
T 1sb8_A          252 NTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYH  301 (352)
T ss_dssp             HHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCC
T ss_pred             HHHHHHHHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCC
Confidence            9999999888762 33 3458765 56799999999999999   87654

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=2.2e-37  Score=253.51  Aligned_cols=220  Identities=17%  Similarity=0.154  Sum_probs=171.7

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEec
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYS  105 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~  105 (294)
                      ||+|||||||||||++|++.|+++|++|++++|++++...+         ..+++++.+|++|.+++.++++++|+|||+
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~   74 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE---------NEHLKVKKADVSSLDEVCEVCKGADAVISA   74 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC---------CTTEEEECCCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc---------cCceEEEEecCCCHHHHHHHhcCCCEEEEe
Confidence            58999999999999999999999999999999986543221         258999999999999999999999999999


Q ss_pred             CCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhH
Q 043792          106 FEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHG  185 (294)
Q Consensus       106 a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~  185 (294)
                      |+....    ....+++|+.++.++++++++. +++||||+||.+++. +...      ...|+.+..+.      +.|+
T Consensus        75 a~~~~~----~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~-~~~~------~~~~~~~~~p~------~~Y~  136 (227)
T 3dhn_A           75 FNPGWN----NPDIYDETIKVYLTIIDGVKKA-GVNRFLMVGGAGSLF-IAPG------LRLMDSGEVPE------NILP  136 (227)
T ss_dssp             CCC----------CCSHHHHHHHHHHHHHHHT-TCSEEEEECCSTTSE-EETT------EEGGGTTCSCG------GGHH
T ss_pred             CcCCCC----ChhHHHHHHHHHHHHHHHHHHh-CCCEEEEeCChhhcc-CCCC------CccccCCcchH------HHHH
Confidence            987532    2247889999999999999999 899999999987433 2222      23344444444      7899


Q ss_pred             hhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCccccccc-cccCCCccccccHHHHHHHHHhhhcCcCCCCe-E
Q 043792          186 LSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAA-EMYEDGVMASVDLRFYVDAHICVFEDVSSYGR-Y  263 (294)
Q Consensus       186 ~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~~~~~~~-~~~~~~~~~~v~v~D~a~~i~~~~~~~~~~~~-~  263 (294)
                      .+|..+|.+++.++.+.+++++++||+++||+...... +..+.. .........|+|++|+|++++.+++++...|+ |
T Consensus       137 ~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~i~~~Dva~ai~~~l~~~~~~g~~~  215 (227)
T 3dhn_A          137 GVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRTGR-YRLGKDDMIVDIVGNSHISVEDYAAAMIDELEHPKHHQERF  215 (227)
T ss_dssp             HHHHHHHHHHHTGGGCCSSEEEEEECCSEEESCCCCCC-CEEESSBCCCCTTSCCEEEHHHHHHHHHHHHHSCCCCSEEE
T ss_pred             HHHHHHHHHHHHHhhccCccEEEEeCCcccCCCccccc-eeecCCCcccCCCCCcEEeHHHHHHHHHHHHhCccccCcEE
Confidence            99999999999988788999999999999999864433 333322 33333336699999999999999999887664 7


Q ss_pred             Eee-cccccHH
Q 043792          264 LCF-NHVINCN  273 (294)
Q Consensus       264 ~~~-~~~~s~~  273 (294)
                      .+. +++.+++
T Consensus       216 ~~~~~~~~~~~  226 (227)
T 3dhn_A          216 TIGYLEHHHHH  226 (227)
T ss_dssp             EEECCSCCC--
T ss_pred             EEEeehhcccC
Confidence            654 4566664

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=100.00  E-value=4.5e-37  Score=264.47  Aligned_cols=252  Identities=27%  Similarity=0.415  Sum_probs=182.9

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEec-CCCC---hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALH-NHGK---LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~---~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~  101 (294)
                      +|+||||||+||||++|++.|+++|++|++++| +++.   ...+..   ......+++++.+|++|.+++.++++++|+
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   77 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTN---LPGASEKLHFFNADLSNPDSFAAAIEGCVG   77 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHT---STTHHHHEEECCCCTTCGGGGHHHHTTCSE
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHh---hhccCCceEEEecCCCCHHHHHHHHcCCCE
Confidence            478999999999999999999999999999998 5432   222211   110112578899999999999999999999


Q ss_pred             EEecCCCCCCCCcc-hhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhh--
Q 043792          102 LFYSFEPPSDHSTY-DELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCK--  178 (294)
Q Consensus       102 Vih~a~~~~~~~~~-~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~--  178 (294)
                      |||+|+........ ....+++|+.++.+++++|.+..++++|||+||.+++......    ..+++|+.+.......  
T Consensus        78 vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~----~~~~~e~~~~~~~~~~~~  153 (322)
T 2p4h_X           78 IFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKD----KDVLDESDWSDVDLLRSV  153 (322)
T ss_dssp             EEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSC----CSEECTTCCCCHHHHHHH
T ss_pred             EEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCC----CeecCCccccchhhhccc
Confidence            99999764322222 2258999999999999999876357899999998643332222    2367777665433211  


Q ss_pred             hccc-hhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc--------cccccccccCCCccccccHHHHHHH
Q 043792          179 KFKL-WHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP--------YLKGAAEMYEDGVMASVDLRFYVDA  249 (294)
Q Consensus       179 ~~~~-~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~--------~~~~~~~~~~~~~~~~v~v~D~a~~  249 (294)
                      .+.. .|+.+|.++|.+++.++.+++++++++||+++|||.......        ...|....++.....|+|++|+|++
T Consensus       154 ~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~a  233 (322)
T 2p4h_X          154 KPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARA  233 (322)
T ss_dssp             CCTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEEEEHHHHHHH
T ss_pred             CcccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCCcCEEEHHHHHHH
Confidence            1112 699999999999999888789999999999999997532111        1223322233322359999999999


Q ss_pred             HHhhhcCcCCCCeEEeecccccHHHHHHHHHHHhC
Q 043792          250 HICVFEDVSSYGRYLCFNHVINCNEDAMKLARMLL  284 (294)
Q Consensus       250 i~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  284 (294)
                      ++.+++.+...|+|+++++.+++.|+++.+.+.+.
T Consensus       234 ~~~~~~~~~~~g~~~~~~~~~s~~e~~~~i~~~~~  268 (322)
T 2p4h_X          234 HIYLLENSVPGGRYNCSPFIVPIEEMSQLLSAKYP  268 (322)
T ss_dssp             HHHHHHSCCCCEEEECCCEEEEHHHHHHHHHHHCT
T ss_pred             HHHHhhCcCCCCCEEEcCCCCCHHHHHHHHHHhCC
Confidence            99999776555678877778999999999988663

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=1.4e-36  Score=267.28  Aligned_cols=247  Identities=16%  Similarity=0.106  Sum_probs=192.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      .+||+||||||+||||++|++.|+++|++|++++|+........        ..+++++.+|++|.+.+.++++++|+||
T Consensus        27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~v~~~~~Dl~d~~~~~~~~~~~d~Vi   98 (379)
T 2c5a_A           27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED--------MFCDEFHLVDLRVMENCLKVTEGVDHVF   98 (379)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG--------GTCSEEEECCTTSHHHHHHHHTTCSEEE
T ss_pred             ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc--------cCCceEEECCCCCHHHHHHHhCCCCEEE
Confidence            35789999999999999999999999999999999875532211        2378999999999999999999999999


Q ss_pred             ecCCCCCCC---CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCC-CCCCCCCCCCCC--CCChhhh
Q 043792          104 YSFEPPSDH---STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHR-DNPTSHDFDERN--WSDVNLC  177 (294)
Q Consensus       104 h~a~~~~~~---~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~-~~~~~~~~~e~~--~~~~~~~  177 (294)
                      |+|+.....   .......+++|+.++.++++++++. ++++|||+||.+  +|+... ..+...+++|++  +..+.  
T Consensus        99 h~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~~~V~~SS~~--v~~~~~~~~~~~~~~~E~~~~~~~~~--  173 (379)
T 2c5a_A           99 NLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN-GIKRFFYASSAC--IYPEFKQLETTNVSLKESDAWPAEPQ--  173 (379)
T ss_dssp             ECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEEEGG--GSCGGGSSSSSSCEECGGGGSSBCCS--
T ss_pred             ECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeehh--eeCCCCCCCccCCCcCcccCCCCCCC--
Confidence            999976431   2334578999999999999999998 889999999986  344221 011123566765  33333  


Q ss_pred             hhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCC----c-------cccccc--cccCCC--cccccc
Q 043792          178 KKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISN----P-------YLKGAA--EMYEDG--VMASVD  242 (294)
Q Consensus       178 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~----~-------~~~~~~--~~~~~~--~~~~v~  242 (294)
                          +.|+.+|.++|.+++.++.+++++++++||+++|||......    .       +.++.+  ..++++  ...|+|
T Consensus       174 ----~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~  249 (379)
T 2c5a_A          174 ----DAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTF  249 (379)
T ss_dssp             ----SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEE
T ss_pred             ----ChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEE
Confidence                789999999999999998888999999999999999854321    0       223332  344554  345999


Q ss_pred             HHHHHHHHHhhhcCcCCCCeEEee-cccccHHHHHHHHHHHhCCCCC
Q 043792          243 LRFYVDAHICVFEDVSSYGRYLCF-NHVINCNEDAMKLARMLLPPSD  288 (294)
Q Consensus       243 v~D~a~~i~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~  288 (294)
                      ++|+|++++.+++++ .++.|++. ++.+++.|+++.+.+.+|.+.+
T Consensus       250 v~Dva~ai~~~l~~~-~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~  295 (379)
T 2c5a_A          250 IDECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEKKLP  295 (379)
T ss_dssp             HHHHHHHHHHHHHSS-CCSCEEECCCCCEEHHHHHHHHHHTTTCCCC
T ss_pred             HHHHHHHHHHHhhcc-CCCeEEeCCCCccCHHHHHHHHHHHhCCCCc
Confidence            999999999999876 44567665 5679999999999999987654

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=1.8e-36  Score=262.24  Aligned_cols=245  Identities=13%  Similarity=0.068  Sum_probs=192.0

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCC--ChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHG--KLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~--~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~  101 (294)
                      +|+||||||+||||++|++.|+++|  ++|++++|+..  ..+.+..   . ....++.++.+|++|.+.+.+++.++|+
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   78 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKD---L-EDDPRYTFVKGDVADYELVKELVRKVDG   78 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTT---T-TTCTTEEEEECCTTCHHHHHHHHHTCSE
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhh---h-ccCCceEEEEcCCCCHHHHHHHhhCCCE
Confidence            4789999999999999999999996  99999998642  2233221   1 1135789999999999999999999999


Q ss_pred             EEecCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCC-cEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhh
Q 043792          102 LFYSFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTV-DKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCK  178 (294)
Q Consensus       102 Vih~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~-~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~  178 (294)
                      |||+|+.....  .......+++|+.++.++++++.+. +. ++|||+||.+  +|+...    ..+++|+.+..+.   
T Consensus        79 vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~SS~~--vyg~~~----~~~~~E~~~~~~~---  148 (336)
T 2hun_A           79 VVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRE-NPEVRFVHVSTDE--VYGDIL----KGSFTENDRLMPS---  148 (336)
T ss_dssp             EEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHH-CTTSEEEEEEEGG--GGCCCS----SSCBCTTBCCCCC---
T ss_pred             EEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEeccHH--HHCCCC----CCCcCCCCCCCCC---
Confidence            99999975421  1123478999999999999999988 54 7999999986  455433    3478888776665   


Q ss_pred             hccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-------cccccc-cccCCCc--cccccHHHHHH
Q 043792          179 KFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-------YLKGAA-EMYEDGV--MASVDLRFYVD  248 (294)
Q Consensus       179 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-------~~~~~~-~~~~~~~--~~~v~v~D~a~  248 (294)
                         +.|+.+|.++|.+++.++.+++++++++||+++|||.......       +.++.. ..++++.  ..|+|++|+|+
T Consensus       149 ---~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  225 (336)
T 2hun_A          149 ---SPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVR  225 (336)
T ss_dssp             ---SHHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHH
T ss_pred             ---CccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHH
Confidence               8899999999999999998889999999999999998543221       233443 4445543  44999999999


Q ss_pred             HHHhhhcCcCCCCeEEeec-ccccHHHHHHHHHHHhCCCC
Q 043792          249 AHICVFEDVSSYGRYLCFN-HVINCNEDAMKLARMLLPPS  287 (294)
Q Consensus       249 ~i~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~  287 (294)
                      +++.+++.+..++.|++.+ +.+++.|+++.+++.+|.+.
T Consensus       226 ~~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~  265 (336)
T 2hun_A          226 AIELVLLKGESREIYNISAGEEKTNLEVVKIILRLMGKGE  265 (336)
T ss_dssp             HHHHHHHHCCTTCEEEECCSCEECHHHHHHHHHHHTTCCS
T ss_pred             HHHHHHhCCCCCCEEEeCCCCcccHHHHHHHHHHHhCCCc
Confidence            9999997655444687765 56999999999999998753

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=6.1e-37  Score=263.61  Aligned_cols=244  Identities=14%  Similarity=0.064  Sum_probs=191.6

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc--CC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG--CS  100 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d  100 (294)
                      ..++|+||||||+||||++|++.|+++|++|++++|+... ..      .     ++.++.+|++|.+.+.+++++  +|
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~------l-----~~~~~~~Dl~d~~~~~~~~~~~~~d   76 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL------P-----NVEMISLDIMDSQRVKKVISDIKPD   76 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC------T-----TEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc------c-----eeeEEECCCCCHHHHHHHHHhcCCC
Confidence            3457899999999999999999999999999999998654 11      1     688999999999999999986  89


Q ss_pred             EEEecCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhh
Q 043792          101 GLFYSFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCK  178 (294)
Q Consensus       101 ~Vih~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~  178 (294)
                      +|||+|+.....  .......+++|+.++.+++++|.+.+++++|||+||.+  +|+...  +...+++|+++..+.   
T Consensus        77 ~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~--v~g~~~--~~~~~~~E~~~~~~~---  149 (321)
T 2pk3_A           77 YIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSE--EYGMIL--PEESPVSEENQLRPM---  149 (321)
T ss_dssp             EEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGG--GTBSCC--GGGCSBCTTSCCBCC---
T ss_pred             EEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHH--hcCCCC--CCCCCCCCCCCCCCC---
Confidence            999999975521  22345789999999999999997653578999999986  444320  014478898877666   


Q ss_pred             hccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-------ccc---c--cc-cccCCC--ccccccH
Q 043792          179 KFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-------YLK---G--AA-EMYEDG--VMASVDL  243 (294)
Q Consensus       179 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-------~~~---~--~~-~~~~~~--~~~~v~v  243 (294)
                         +.|+.+|.++|.+++.++.+++++++++||+++|||.......       +.+   |  .+ ..++++  ...|+|+
T Consensus       150 ---~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v  226 (321)
T 2pk3_A          150 ---SPYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDV  226 (321)
T ss_dssp             ---SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEH
T ss_pred             ---CccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEH
Confidence               8999999999999999988889999999999999998653211       222   4  22 344443  3459999


Q ss_pred             HHHHHHHHhhhcCcCCCCeEEeec-ccccHHHHHHHHHHHhCCCCC
Q 043792          244 RFYVDAHICVFEDVSSYGRYLCFN-HVINCNEDAMKLARMLLPPSD  288 (294)
Q Consensus       244 ~D~a~~i~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~  288 (294)
                      +|+|++++.++..+..++.|++.+ +.+++.|+++.+.+.+|.+.+
T Consensus       227 ~Dva~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  272 (321)
T 2pk3_A          227 RDIVQAYWLLSQYGKTGDVYNVCSGIGTRIQDVLDLLLAMANVKID  272 (321)
T ss_dssp             HHHHHHHHHHHHHCCTTCEEEESCSCEEEHHHHHHHHHHHSSSCCE
T ss_pred             HHHHHHHHHHHhCCCCCCeEEeCCCCCeeHHHHHHHHHHHhCCCCc
Confidence            999999999998764455687754 579999999999999987643

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=2.4e-36  Score=261.63  Aligned_cols=244  Identities=17%  Similarity=0.104  Sum_probs=193.2

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHC---C---CeEEEEecCCC--ChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc
Q 043792           27 KTVCVMDASGHFASALVRRLLLR---G---YTVHAALHNHG--KLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG   98 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~---g---~~V~~~~r~~~--~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~   98 (294)
                      |+|||||||||||++|++.|+++   |   ++|++++|+..  ..+.+..   . ....++.++.+|++|.+.+.+++.+
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~~~~Dl~d~~~~~~~~~~   76 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAP---V-DADPRLRFVHGDIRDAGLLARELRG   76 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGG---G-TTCTTEEEEECCTTCHHHHHHHTTT
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhh---c-ccCCCeEEEEcCCCCHHHHHHHhcC
Confidence            58999999999999999999997   8   99999999653  2222222   1 1235789999999999999999999


Q ss_pred             CCEEEecCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhh
Q 043792           99 CSGLFYSFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNL  176 (294)
Q Consensus        99 ~d~Vih~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~  176 (294)
                      +|+|||+|+.....  ....+..+++|+.++.++++++.+. ++++|||+||.+  +|+...    ..+++|+.+..+. 
T Consensus        77 ~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~-~~~~~v~~SS~~--vyg~~~----~~~~~E~~~~~~~-  148 (337)
T 1r6d_A           77 VDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVSTNQ--VYGSID----SGSWTESSPLEPN-  148 (337)
T ss_dssp             CCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGG--GGCCCS----SSCBCTTSCCCCC-
T ss_pred             CCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEecchH--HhCCCC----CCCCCCCCCCCCC-
Confidence            99999999975421  1123478999999999999999999 889999999986  455433    3478888776665 


Q ss_pred             hhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-------cccccc-cccCCCc--cccccHHHH
Q 043792          177 CKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-------YLKGAA-EMYEDGV--MASVDLRFY  246 (294)
Q Consensus       177 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-------~~~~~~-~~~~~~~--~~~v~v~D~  246 (294)
                           +.|+.+|.++|.+++.++.+++++++++||+++|||.......       +.++.. .+++++.  ..|+|++|+
T Consensus       149 -----~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  223 (337)
T 1r6d_A          149 -----SPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDH  223 (337)
T ss_dssp             -----SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHH
T ss_pred             -----CchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHH
Confidence                 8899999999999999988889999999999999998543221       233443 3445543  359999999


Q ss_pred             HHHHHhhhcCcCCCCeEEeec-ccccHHHHHHHHHHHhCCCC
Q 043792          247 VDAHICVFEDVSSYGRYLCFN-HVINCNEDAMKLARMLLPPS  287 (294)
Q Consensus       247 a~~i~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~  287 (294)
                      |++++.+++++..++.|++.+ +.+++.|+++.+.+.+|.+.
T Consensus       224 a~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~  265 (337)
T 1r6d_A          224 CRGIALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADW  265 (337)
T ss_dssp             HHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHTCCG
T ss_pred             HHHHHHHHhCCCCCCEEEeCCCCCccHHHHHHHHHHHhCCCc
Confidence            999999997665445687765 56999999999999998753

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=100.00  E-value=2.3e-37  Score=268.19  Aligned_cols=253  Identities=30%  Similarity=0.424  Sum_probs=183.7

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhh---HHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQC---IEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      +|+||||||+||||++|++.|+++|++|++++|+.+....   +..   .. ...+++++.+|++|.+.+.++++++|+|
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~---~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~V   84 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLE---LQ-ELGDLKIFRADLTDELSFEAPIAGCDFV   84 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHH---HG-GGSCEEEEECCTTTSSSSHHHHTTCSEE
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHh---cC-CCCcEEEEecCCCChHHHHHHHcCCCEE
Confidence            6899999999999999999999999999999997654322   222   21 1246889999999999999999999999


Q ss_pred             EecCCCCCCCCcch-hhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhh--hh
Q 043792          103 FYSFEPPSDHSTYD-ELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLC--KK  179 (294)
Q Consensus       103 ih~a~~~~~~~~~~-~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~--~~  179 (294)
                      ||+|+......... .+.+++|+.++.+++++|.+.++++||||+||.+++.+.... .+ ..+++|+.+......  ..
T Consensus        85 ih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~-~~-~~~~~E~~~~~~~~~~~~~  162 (338)
T 2rh8_A           85 FHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLD-GT-GLVVDEKNWTDIEFLTSAK  162 (338)
T ss_dssp             EEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHT-CS-CCCCCTTTTTCC-------
T ss_pred             EEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcC-CC-CcccChhhccchhhccccC
Confidence            99998754322222 248899999999999999988238999999998643322111 00 126777765432211  11


Q ss_pred             -ccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc--c------ccccccccC--------CCcccccc
Q 043792          180 -FKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP--Y------LKGAAEMYE--------DGVMASVD  242 (294)
Q Consensus       180 -~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~--~------~~~~~~~~~--------~~~~~~v~  242 (294)
                       ....|+.+|.++|.+++.++.+++++++++||++||||.......  +      ..|....++        ++...|+|
T Consensus       163 ~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~  242 (338)
T 2rh8_A          163 PPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAH  242 (338)
T ss_dssp             CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEEEE
T ss_pred             CccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCcccEEE
Confidence             112699999999999999887789999999999999998532211  0      223221111        12236999


Q ss_pred             HHHHHHHHHhhhcCcCCCCeEEeecccccHHHHHHHHHHHhC
Q 043792          243 LRFYVDAHICVFEDVSSYGRYLCFNHVINCNEDAMKLARMLL  284 (294)
Q Consensus       243 v~D~a~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  284 (294)
                      ++|+|++++.+++++..++.|+++++.+++.|+++.+.+.++
T Consensus       243 v~Dva~a~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~~~~  284 (338)
T 2rh8_A          243 VEDVCRAHIFVAEKESASGRYICCAANTSVPELAKFLSKRYP  284 (338)
T ss_dssp             HHHHHHHHHHHHHCTTCCEEEEECSEEECHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHHHHcCCCcCCcEEEecCCCCHHHHHHHHHHhCC
Confidence            999999999999876556678888778999999999998764

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=100.00  E-value=6.4e-37  Score=262.40  Aligned_cols=237  Identities=13%  Similarity=0.117  Sum_probs=188.5

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHC--CCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCCE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLR--GYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCSG  101 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~  101 (294)
                      +|+||||||+||||++|++.|+++  |++|++++|+..... +..         +++++.+|++|.+++.++++  ++|+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~~---------~~~~~~~D~~d~~~~~~~~~~~~~d~   71 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VVN---------SGPFEVVNALDFNQIEHLVEVHKITD   71 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HHH---------SSCEEECCTTCHHHHHHHHHHTTCCE
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-ccC---------CCceEEecCCCHHHHHHHHhhcCCCE
Confidence            478999999999999999999999  899999999876532 222         57899999999999999998  8999


Q ss_pred             EEecCCCCCCC-CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhc
Q 043792          102 LFYSFEPPSDH-STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKF  180 (294)
Q Consensus       102 Vih~a~~~~~~-~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~  180 (294)
                      |||+|+..... .......+++|+.++.++++++++. ++++|||+||.+  +|+...  + ..+.+|+.+..+.     
T Consensus        72 vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~--~~~~~~--~-~~~~~e~~~~~~~-----  140 (312)
T 2yy7_A           72 IYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAK-KIKKIFWPSSIA--VFGPTT--P-KENTPQYTIMEPS-----  140 (312)
T ss_dssp             EEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTT-SCSEEECCEEGG--GCCTTS--C-SSSBCSSCBCCCC-----
T ss_pred             EEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHH--HhCCCC--C-CCCccccCcCCCC-----
Confidence            99999875421 1223478999999999999999998 889999999986  444322  0 2367787776665     


Q ss_pred             cchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCC----c--------cccccccccCC--CccccccHHHH
Q 043792          181 KLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISN----P--------YLKGAAEMYED--GVMASVDLRFY  246 (294)
Q Consensus       181 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~----~--------~~~~~~~~~~~--~~~~~v~v~D~  246 (294)
                       +.|+.+|.++|.+++.++.+++++++++||+++||+......    .        +..+....+++  ....|+|++|+
T Consensus       141 -~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  219 (312)
T 2yy7_A          141 -TVYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDA  219 (312)
T ss_dssp             -SHHHHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHH
T ss_pred             -chhHHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHH
Confidence             889999999999999998888999999999999997632211    0        11232233433  34459999999


Q ss_pred             HHHHHhhhcCcCC----CCeEEeecccccHHHHHHHHHHHhC
Q 043792          247 VDAHICVFEDVSS----YGRYLCFNHVINCNEDAMKLARMLL  284 (294)
Q Consensus       247 a~~i~~~~~~~~~----~~~~~~~~~~~s~~~~~~~~~~~~~  284 (294)
                      |++++.+++++..    ++.|+++++.+|+.|+++.+.+.++
T Consensus       220 a~a~~~~~~~~~~~~~~~~~~ni~~~~~s~~e~~~~i~~~~~  261 (312)
T 2yy7_A          220 IDATINIMKAPVEKIKIHSSYNLAAMSFTPTEIANEIKKHIP  261 (312)
T ss_dssp             HHHHHHHHHSCGGGCCCSSCEECCSEEECHHHHHHHHHTTCT
T ss_pred             HHHHHHHHhCcccccccCceEEeCCCccCHHHHHHHHHHHCC
Confidence            9999999987653    2468887788999999999999887

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=2e-36  Score=266.14  Aligned_cols=248  Identities=17%  Similarity=0.112  Sum_probs=187.8

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      .++|+|||||||||||++|++.|+++| ++|++++|+.......     +. ...+++++.+|++|++.+.++++++|+|
T Consensus        30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~-----l~-~~~~v~~~~~Dl~d~~~l~~~~~~~d~V  103 (377)
T 2q1s_A           30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKIN-----VP-DHPAVRFSETSITDDALLASLQDEYDYV  103 (377)
T ss_dssp             GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGG-----SC-CCTTEEEECSCTTCHHHHHHCCSCCSEE
T ss_pred             hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhh-----cc-CCCceEEEECCCCCHHHHHHHhhCCCEE
Confidence            457899999999999999999999999 9999999976542110     10 1357999999999999999999999999


Q ss_pred             EecCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCC--CCC---CC-Ch
Q 043792          103 FYSFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFD--ERN---WS-DV  174 (294)
Q Consensus       103 ih~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~--e~~---~~-~~  174 (294)
                      ||+|+.....  .......+++|+.++.+++++|++..++++|||+||.+  +|+...    ..+++  |+.   +. .+
T Consensus       104 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~--vyg~~~----~~~~~~~E~~~~~~~~~~  177 (377)
T 2q1s_A          104 FHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGC--SIAEKT----FDDAKATEETDIVSLHNN  177 (377)
T ss_dssp             EECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------------CCCCCCCSSCC
T ss_pred             EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHH--HcCCCC----CCCcCcccccccccccCC
Confidence            9999975432  11234788999999999999997753578999999985  455433    33667  776   33 44


Q ss_pred             hhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCC---------CC----CCc-------cccccc-ccc
Q 043792          175 NLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDV---------TI----SNP-------YLKGAA-EMY  233 (294)
Q Consensus       175 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~---------~~----~~~-------~~~~~~-~~~  233 (294)
                      .      ++|+.+|.++|.+++.++.+.+++++++||+++||+..         ..    ...       +.++.+ ..+
T Consensus       178 ~------~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  251 (377)
T 2q1s_A          178 D------SPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLE  251 (377)
T ss_dssp             C------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCS
T ss_pred             C------CchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEe
Confidence            4      78999999999999999888899999999999999986         21    111       223443 334


Q ss_pred             CC--CccccccHHHHHHH-HHhhhcCcCCCCeEEeec-ccccHHHHHHHHHHHhCCCCCCC
Q 043792          234 ED--GVMASVDLRFYVDA-HICVFEDVSSYGRYLCFN-HVINCNEDAMKLARMLLPPSDTS  290 (294)
Q Consensus       234 ~~--~~~~~v~v~D~a~~-i~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~  290 (294)
                      ++  ....|+|++|+|++ ++.+++++.. |.|++.+ +.+++.|+++.+.+.+|.+.++.
T Consensus       252 g~g~~~~~~i~v~Dva~a~i~~~~~~~~~-g~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~  311 (377)
T 2q1s_A          252 NGGVATRDFIFVEDVANGLIACAADGTPG-GVYNIASGKETSIADLATKINEITGNNTELD  311 (377)
T ss_dssp             GGGCCEECCEEHHHHHHHHHHHHHHCCTT-EEEECCCCCCEEHHHHHHHHHHHHTCCSCCC
T ss_pred             CCCCeEEeeEEHHHHHHHHHHHHHhcCCC-CeEEecCCCceeHHHHHHHHHHHhCCCCCce
Confidence            44  34459999999999 9999987653 4787655 67999999999999999876543

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-36  Score=263.32  Aligned_cols=251  Identities=12%  Similarity=0.048  Sum_probs=188.0

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC-CChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc--CCEE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNH-GKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG--CSGL  102 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~V  102 (294)
                      ||+|||||||||||++|++.|+++|++|++++|+. .........  +. ...+++++.+|++|.+.+.+++++  +|+|
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~--l~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   77 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHW--LS-SLGNFEFVHGDIRNKNDVTRLITKYMPDSC   77 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHH--HH-TTCCCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhh--hc-cCCceEEEEcCCCCHHHHHHHHhccCCCEE
Confidence            47999999999999999999999999999999864 222221121  11 124689999999999999999988  9999


Q ss_pred             EecCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCCc-EEEEecCcceeeeCCCCCCC------------CCCCCC
Q 043792          103 FYSFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTVD-KVVFTSSLTAVVWNNHRDNP------------TSHDFD  167 (294)
Q Consensus       103 ih~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~v~~Ss~~~~~~~~~~~~~------------~~~~~~  167 (294)
                      ||+|+.....  .......+++|+.++.+++++|.+. +++ +|||+||.+  +|+.....+            ...+++
T Consensus        78 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~iv~~SS~~--v~g~~~~~~~~e~~~~~~~~~~~~~~~  154 (347)
T 1orr_A           78 FHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-NSNCNIIYSSTNK--VYGDLEQYKYNETETRYTCVDKPNGYD  154 (347)
T ss_dssp             EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEEGG--GGTTCTTSCEEECSSCEEETTCTTCBC
T ss_pred             EECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEeccHH--HhCCCCcCCcccccccccccccccCcc
Confidence            9999975421  1123478899999999999999998 775 999999986  454332000            001255


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCC--c--------ccccc-----c-c
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISN--P--------YLKGA-----A-E  231 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~--~--------~~~~~-----~-~  231 (294)
                      |+.+..+.      +.|+.+|.++|.+++.++.+++++++++||++|||+......  .        +..+.     + .
T Consensus       155 e~~~~~~~------~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (347)
T 1orr_A          155 ESTQLDFH------SPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFT  228 (347)
T ss_dssp             TTSCCCCC------HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEE
T ss_pred             ccCCCCCC------CchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeE
Confidence            55555444      789999999999999998888999999999999999854221  0        22233     2 2


Q ss_pred             ccCCCc--cccccHHHHHHHHHhhhcC-cCCCC-eEEeecc---cccHHHHHHHHHHHhCCCCC
Q 043792          232 MYEDGV--MASVDLRFYVDAHICVFED-VSSYG-RYLCFNH---VINCNEDAMKLARMLLPPSD  288 (294)
Q Consensus       232 ~~~~~~--~~~v~v~D~a~~i~~~~~~-~~~~~-~~~~~~~---~~s~~~~~~~~~~~~~~~~~  288 (294)
                      .++++.  ..|+|++|+|++++.++.+ ....| .|++.++   ++++.|+++.+.+.+|.+.+
T Consensus       229 ~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~  292 (347)
T 1orr_A          229 ISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMR  292 (347)
T ss_dssp             EESSSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCC
T ss_pred             EecCCcceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCC
Confidence            344443  4499999999999999975 23345 5877654   39999999999999987654

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=100.00  E-value=2.8e-36  Score=262.28  Aligned_cols=247  Identities=13%  Similarity=0.057  Sum_probs=192.0

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHC--CCeEEEEecCCCC--hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLR--GYTVHAALHNHGK--LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~--~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~  101 (294)
                      ||+||||||+||||++|++.|+++  |++|++++|+...  .+.+..   .  ...+++++.+|++|.+.+.++++++|+
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~~~Dl~d~~~~~~~~~~~d~   78 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEA---I--LGDRVELVVGDIADAELVDKLAAKADA   78 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGG---G--CSSSEEEEECCTTCHHHHHHHHTTCSE
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhh---h--ccCCeEEEECCCCCHHHHHHHhhcCCE
Confidence            589999999999999999999999  8999999997532  222221   1  125789999999999999999999999


Q ss_pred             EEecCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCC--------CCCCCCCCCCCC
Q 043792          102 LFYSFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRD--------NPTSHDFDERNW  171 (294)
Q Consensus       102 Vih~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~--------~~~~~~~~e~~~  171 (294)
                      |||+|+.....  ....+..+++|+.++.+++++|.+. ++ +|||+||.++  |+....        .+...+++|+++
T Consensus        79 vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~-~~v~~SS~~v--yg~~~~~~~~~~~~~~~~~~~~E~~~  154 (348)
T 1oc2_A           79 IVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-DI-RFHHVSTDEV--YGDLPLREDLPGHGEGPGEKFTAETN  154 (348)
T ss_dssp             EEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGG--GCCBCCGGGSTTTTCSTTSSBCTTSC
T ss_pred             EEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHh-CC-eEEEecccce--eCCCcccccccccccccCCCcCCCCC
Confidence            99999976421  1123478899999999999999998 77 9999999863  433210        011247888877


Q ss_pred             CChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-------cccccc-cccCCC--ccccc
Q 043792          172 SDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-------YLKGAA-EMYEDG--VMASV  241 (294)
Q Consensus       172 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-------~~~~~~-~~~~~~--~~~~v  241 (294)
                      ..+.      +.|+.+|.++|.+++.++.+++++++++||+++|||.......       +.++.. .+++++  ...|+
T Consensus       155 ~~~~------~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  228 (348)
T 1oc2_A          155 YNPS------SPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWI  228 (348)
T ss_dssp             CCCC------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECE
T ss_pred             CCCC------CccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeE
Confidence            6665      8899999999999999988889999999999999998643221       223443 334443  34599


Q ss_pred             cHHHHHHHHHhhhcCcCCCCeEEeec-ccccHHHHHHHHHHHhCCCC
Q 043792          242 DLRFYVDAHICVFEDVSSYGRYLCFN-HVINCNEDAMKLARMLLPPS  287 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~  287 (294)
                      |++|+|++++.+++.+..++.|++.+ +++++.|+++.+.+.+|.+.
T Consensus       229 ~v~Dva~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~  275 (348)
T 1oc2_A          229 HTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPK  275 (348)
T ss_dssp             EHHHHHHHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCT
T ss_pred             EHHHHHHHHHHHhhCCCCCCeEEeCCCCCCCHHHHHHHHHHHhCCCc
Confidence            99999999999997655444687665 57999999999999998764

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=100.00  E-value=4.4e-36  Score=259.77  Aligned_cols=246  Identities=15%  Similarity=0.015  Sum_probs=193.3

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCCh--hhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc--
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKL--QCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG--   98 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--   98 (294)
                      ..++|+||||||+||||++|++.|+++|++|++++|+....  ..+..   . ....+++++.+|++|.+++.+++++  
T Consensus        11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~   86 (335)
T 1rpn_A           11 GSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRE---L-GIEGDIQYEDGDMADACSVQRAVIKAQ   86 (335)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHH---T-TCGGGEEEEECCTTCHHHHHHHHHHHC
T ss_pred             cccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhh---c-cccCceEEEECCCCCHHHHHHHHHHcC
Confidence            34578999999999999999999999999999999986542  22222   1 1224789999999999999999986  


Q ss_pred             CCEEEecCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCC-cEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChh
Q 043792           99 CSGLFYSFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTV-DKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVN  175 (294)
Q Consensus        99 ~d~Vih~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~-~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~  175 (294)
                      +|+|||+|+.....  .......+++|+.++.++++++.+. ++ ++|||+||.+  +|+...    ..+++|+++..+.
T Consensus        87 ~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~SS~~--v~g~~~----~~~~~E~~~~~p~  159 (335)
T 1rpn_A           87 PQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQF-SPETRFYQASTSE--MFGLIQ----AERQDENTPFYPR  159 (335)
T ss_dssp             CSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTSEEEEEEEGG--GGCSCS----SSSBCTTSCCCCC
T ss_pred             CCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEeCHH--HhCCCC----CCCCCcccCCCCC
Confidence            69999999975432  2234578999999999999999998 75 8999999986  455444    4478898887766


Q ss_pred             hhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc----------cccccc--cccCCC--ccccc
Q 043792          176 LCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP----------YLKGAA--EMYEDG--VMASV  241 (294)
Q Consensus       176 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~----------~~~~~~--~~~~~~--~~~~v  241 (294)
                            +.|+.+|.++|.+++.++.+++++++++||+++|||.......          +..|..  ..++++  ...|+
T Consensus       160 ------~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i  233 (335)
T 1rpn_A          160 ------SPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWG  233 (335)
T ss_dssp             ------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECE
T ss_pred             ------ChhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceE
Confidence                  8899999999999999998889999999999999997543210          223443  234444  34599


Q ss_pred             cHHHHHHHHHhhhcCcCCCCeEEee-cccccHHHHHHHHHHHhCCC
Q 043792          242 DLRFYVDAHICVFEDVSSYGRYLCF-NHVINCNEDAMKLARMLLPP  286 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~  286 (294)
                      |++|+|++++.+++++. ++.|++. ++.+++.|+++.+.+.+|.+
T Consensus       234 ~v~Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~  278 (335)
T 1rpn_A          234 FAGDYVEAMWLMLQQDK-ADDYVVATGVTTTVRDMCQIAFEHVGLD  278 (335)
T ss_dssp             EHHHHHHHHHHHHHSSS-CCCEEECCSCEEEHHHHHHHHHHTTTCC
T ss_pred             EHHHHHHHHHHHHhcCC-CCEEEEeCCCCccHHHHHHHHHHHhCCC
Confidence            99999999999998765 3567665 56799999999999999875

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=100.00  E-value=5.2e-36  Score=259.84  Aligned_cols=260  Identities=18%  Similarity=0.141  Sum_probs=193.8

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEE-ECCCCChhHHHHHhccCCE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVF-QADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~-~~Dl~~~~~~~~~~~~~d~  101 (294)
                      ..++|+||||||+||||++|++.|+++|++|++++|+.++.+.+...+.. ....+++++ .+|++|.+.+.++++++|+
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   86 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDA-KYPGRFETAVVEDMLKQGAYDEVIKGAAG   86 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH-HSTTTEEEEECSCTTSTTTTTTTTTTCSE
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhc-cCCCceEEEEecCCcChHHHHHHHcCCCE
Confidence            34568999999999999999999999999999999986554444331100 112478888 8999999999999999999


Q ss_pred             EEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhh-----
Q 043792          102 LFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNL-----  176 (294)
Q Consensus       102 Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~-----  176 (294)
                      |||+|+..... ......+++|+.++.+++++|.+..++++|||+||.+++..+...  ....+++|+++.....     
T Consensus        87 vih~A~~~~~~-~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~--~~~~~~~E~~~~~~~~~~~~~  163 (342)
T 1y1p_A           87 VAHIASVVSFS-NKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPN--VEGIYLDEKSWNLESIDKAKT  163 (342)
T ss_dssp             EEECCCCCSCC-SCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTT--CCCCEECTTCCCHHHHHHHHH
T ss_pred             EEEeCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCC--CCCcccCccccCchhhhhhcc
Confidence            99999976543 234578999999999999999853378999999998643222111  0014678887432110     


Q ss_pred             -----hhhccchhHhhHHHHHHHHHHHHHhc--CCeEEEEecCceeCCCCCCCC---c-------cccccc-cccCC-Cc
Q 043792          177 -----CKKFKLWHGLSKTLAEKTAWALAMDR--GISMVSINGGLVMGPDVTISN---P-------YLKGAA-EMYED-GV  237 (294)
Q Consensus       177 -----~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ilrp~~i~G~~~~~~~---~-------~~~~~~-~~~~~-~~  237 (294)
                           +..+.+.|+.+|.++|.+++.++.++  +++++++||+++||+......   .       +.++.. .++++ ..
T Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (342)
T 1y1p_A          164 LPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPP  243 (342)
T ss_dssp             SCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCS
T ss_pred             ccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccCCc
Confidence                 11222789999999999999998775  799999999999999854321   1       223433 22333 33


Q ss_pred             cccccHHHHHHHHHhhhcCcCCCCe-EEeecccccHHHHHHHHHHHhCCC
Q 043792          238 MASVDLRFYVDAHICVFEDVSSYGR-YLCFNHVINCNEDAMKLARMLLPP  286 (294)
Q Consensus       238 ~~~v~v~D~a~~i~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~  286 (294)
                      ..|+|++|+|++++.++.++...|. +++.++.+|+.|+++.+.+.++..
T Consensus       244 ~~~v~v~Dva~a~~~~~~~~~~~g~~~~~~g~~~s~~e~~~~i~~~~~~~  293 (342)
T 1y1p_A          244 QYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSK  293 (342)
T ss_dssp             EEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTS
T ss_pred             CCEeEHHHHHHHHHHHHcCcccCCceEEEeCCCCCHHHHHHHHHHHCCCc
Confidence            4599999999999999987655554 666777899999999999998864

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=100.00  E-value=2e-36  Score=261.38  Aligned_cols=242  Identities=14%  Similarity=0.074  Sum_probs=189.9

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCCEEE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCSGLF  103 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~Vi  103 (294)
                      ||+||||||+||||++|++.|+++|++|++++|+......  .   +   ..+++++.+|++|.+.+.++++  ++|+||
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~---~---~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   72 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHED--A---I---TEGAKFYNGDLRDKAFLRDVFTQENIEAVM   72 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG--G---S---CTTSEEEECCTTCHHHHHHHHHHSCEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchh--h---c---CCCcEEEECCCCCHHHHHHHHhhcCCCEEE
Confidence            5799999999999999999999999999999997543221  0   1   1278999999999999999998  899999


Q ss_pred             ecCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhcc
Q 043792          104 YSFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFK  181 (294)
Q Consensus       104 h~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  181 (294)
                      |+|+.....  .......+++|+.++.+++++|.+. ++++|||+||.+  +|+...    ..+++|+++..+.      
T Consensus        73 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~Ss~~--~~~~~~----~~~~~E~~~~~~~------  139 (330)
T 2c20_A           73 HFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEF-KVDKFIFSSTAA--TYGEVD----VDLITEETMTNPT------  139 (330)
T ss_dssp             ECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGG--GGCSCS----SSSBCTTSCCCCS------
T ss_pred             ECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHc-CCCEEEEeCCce--eeCCCC----CCCCCcCCCCCCC------
Confidence            999976432  1223478899999999999999998 889999999986  455443    4578898887665      


Q ss_pred             chhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCC--------CCc----c---cccc--c-cccC------C--
Q 043792          182 LWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTI--------SNP----Y---LKGA--A-EMYE------D--  235 (294)
Q Consensus       182 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~--------~~~----~---~~~~--~-~~~~------~--  235 (294)
                      +.|+.+|.++|.+++.++.+++++++++||+++||+....        ...    +   ..+.  . .+++      +  
T Consensus       140 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~  219 (330)
T 2c20_A          140 NTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGT  219 (330)
T ss_dssp             SHHHHHHHHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSS
T ss_pred             ChHHHHHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCc
Confidence            8899999999999999998889999999999999996321        011    1   1111  1 2222      2  


Q ss_pred             CccccccHHHHHHHHHhhhcCcCC---CCeEEee-cccccHHHHHHHHHHHhCCCCC
Q 043792          236 GVMASVDLRFYVDAHICVFEDVSS---YGRYLCF-NHVINCNEDAMKLARMLLPPSD  288 (294)
Q Consensus       236 ~~~~~v~v~D~a~~i~~~~~~~~~---~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~  288 (294)
                      ....|+|++|+|++++.+++++..   ++.|++. ++++++.|+++.+.+.+|.+.+
T Consensus       220 ~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~  276 (330)
T 2c20_A          220 CIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIP  276 (330)
T ss_dssp             CEECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCCC
T ss_pred             eeEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCCc
Confidence            334599999999999999976432   3458775 5679999999999999987654

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=1.2e-36  Score=260.65  Aligned_cols=240  Identities=23%  Similarity=0.186  Sum_probs=188.2

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCCEEEe
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCSGLFY  104 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~Vih  104 (294)
                      |+||||||+||||+++++.|+++|++|++++|.......  .   .   ..++.++.+|++|.+++.++++  ++|+|||
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~---~---~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~   72 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE--N---V---PKGVPFFRVDLRDKEGVERAFREFRPTHVSH   72 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG--G---S---CTTCCEECCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh--h---c---ccCeEEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence            589999999999999999999999999999985432111  0   1   1367889999999999999998  7999999


Q ss_pred             cCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCC-CCCCCCCCCCCCCCCCChhhhhhcc
Q 043792          105 SFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNN-HRDNPTSHDFDERNWSDVNLCKKFK  181 (294)
Q Consensus       105 ~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~~~  181 (294)
                      +|+.....  .......+++|+.++.+++++|++. ++++||++||.+ .+|+. ..    ..+++|+.+..+.      
T Consensus        73 ~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~SS~~-~~~g~~~~----~~~~~E~~~~~~~------  140 (311)
T 2p5y_A           73 QAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQY-GVEKLVFASTGG-AIYGEVPE----GERAEETWPPRPK------  140 (311)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEHH-HHHCCCCT----TCCBCTTSCCCCC------
T ss_pred             CccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCCh-hhcCCCCC----CCCcCCCCCCCCC------
Confidence            99875421  1123478899999999999999988 889999999983 24443 22    3367888776655      


Q ss_pred             chhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCC--c--------cccccc-ccc-----CCCc--cccccH
Q 043792          182 LWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISN--P--------YLKGAA-EMY-----EDGV--MASVDL  243 (294)
Q Consensus       182 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~--~--------~~~~~~-~~~-----~~~~--~~~v~v  243 (294)
                      +.|+.+|.++|.+++.++.+++++++++||+++|||......  .        +.++.+ ..+     +++.  ..|+|+
T Consensus       141 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v  220 (311)
T 2p5y_A          141 SPYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYV  220 (311)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEH
T ss_pred             ChHHHHHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEH
Confidence            789999999999999998888999999999999999854321  0        123443 333     4443  349999


Q ss_pred             HHHHHHHHhhhcCcCCCCeEEee-cccccHHHHHHHHHHHhCCCCC
Q 043792          244 RFYVDAHICVFEDVSSYGRYLCF-NHVINCNEDAMKLARMLLPPSD  288 (294)
Q Consensus       244 ~D~a~~i~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~  288 (294)
                      +|+|++++.+++.+  ++.|++. ++.+|+.|+++.+.+.+|.+.+
T Consensus       221 ~Dva~a~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  264 (311)
T 2p5y_A          221 GDVAEAHALALFSL--EGIYNVGTGEGHTTREVLMAVAEAAGKAPE  264 (311)
T ss_dssp             HHHHHHHHHHHHHC--CEEEEESCSCCEEHHHHHHHHHHHHTCCCC
T ss_pred             HHHHHHHHHHHhCC--CCEEEeCCCCCccHHHHHHHHHHHhCCCCC
Confidence            99999999998764  4568765 5679999999999999987654

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=100.00  E-value=6e-37  Score=259.58  Aligned_cols=231  Identities=15%  Similarity=0.077  Sum_probs=183.6

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc-CCEEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG-CSGLF  103 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-~d~Vi  103 (294)
                      ++|+||||| +||||++|++.|+++|++|++++|+.+..            ..+++++.+|+.|.+.+.+++++ +|+||
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~------------~~~~~~~~~Dl~d~~~~~~~~~~~~d~vi   68 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM------------PAGVQTLIADVTRPDTLASIVHLRPEILV   68 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC------------CTTCCEEECCTTCGGGCTTGGGGCCSEEE
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccCCceEEccCCChHHHHHhhcCCCCEEE
Confidence            357999999 59999999999999999999999986542            24789999999999999999987 99999


Q ss_pred             ecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccch
Q 043792          104 YSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLW  183 (294)
Q Consensus       104 h~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  183 (294)
                      |+|+...   ......+++|+.++.+++++|++. ++++|||+||.+  +|+...    ..+++|+++..+.      +.
T Consensus        69 h~a~~~~---~~~~~~~~~n~~~~~~ll~a~~~~-~~~~~v~~SS~~--vyg~~~----~~~~~E~~~~~p~------~~  132 (286)
T 3gpi_A           69 YCVAASE---YSDEHYRLSYVEGLRNTLSALEGA-PLQHVFFVSSTG--VYGQEV----EEWLDEDTPPIAK------DF  132 (286)
T ss_dssp             ECHHHHH---HC-----CCSHHHHHHHHHHTTTS-CCCEEEEEEEGG--GCCCCC----SSEECTTSCCCCC------SH
T ss_pred             EeCCCCC---CCHHHHHHHHHHHHHHHHHHHhhC-CCCEEEEEcccE--EEcCCC----CCCCCCCCCCCCC------Ch
Confidence            9998633   223477889999999999999988 889999999986  555544    5578999888777      89


Q ss_pred             hHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCC-CccccccccccCC--CccccccHHHHHHHHHhhhcCc---
Q 043792          184 HGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTIS-NPYLKGAAEMYED--GVMASVDLRFYVDAHICVFEDV---  257 (294)
Q Consensus       184 Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~-~~~~~~~~~~~~~--~~~~~v~v~D~a~~i~~~~~~~---  257 (294)
                      |+.+|.++|.+ +.+     ++++++||+++|||..... ..+.+ .. ..++  ....|+|++|+|++++.+++++   
T Consensus       133 Y~~sK~~~E~~-~~~-----~~~~ilR~~~v~G~~~~~~~~~~~~-~~-~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~  204 (286)
T 3gpi_A          133 SGKRMLEAEAL-LAA-----YSSTILRFSGIYGPGRLRMIRQAQT-PE-QWPARNAWTNRIHRDDGAAFIAYLIQQRSHA  204 (286)
T ss_dssp             HHHHHHHHHHH-GGG-----SSEEEEEECEEEBTTBCHHHHHTTC-GG-GSCSSBCEECEEEHHHHHHHHHHHHHHHTTS
T ss_pred             hhHHHHHHHHH-Hhc-----CCeEEEecccccCCCchhHHHHHHh-cc-cCCCcCceeEEEEHHHHHHHHHHHHhhhccC
Confidence            99999999998 542     9999999999999984311 11333 22 2233  3445999999999999999874   


Q ss_pred             CCCCeEEeec-ccccHHHHHHHHHHHhCCCCCCCCC
Q 043792          258 SSYGRYLCFN-HVINCNEDAMKLARMLLPPSDTSTP  292 (294)
Q Consensus       258 ~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~  292 (294)
                      ..++.|++.+ +.+++.|+++.+.+.+|.+.++..+
T Consensus       205 ~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~  240 (286)
T 3gpi_A          205 VPERLYIVTDNQPLPVHDLLRWLADRQGIAYPAGAT  240 (286)
T ss_dssp             CCCSEEEECCSCCEEHHHHHHHHHHHTTCCCCCSCC
T ss_pred             CCCceEEEeCCCCCCHHHHHHHHHHHcCCCCCCCCC
Confidence            4455687764 6799999999999999988766544

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=100.00  E-value=1.2e-35  Score=257.91  Aligned_cols=246  Identities=15%  Similarity=0.177  Sum_probs=188.4

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHC-CCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCCh-hHHHHHhccCCEEEe
Q 043792           27 KTVCVMDASGHFASALVRRLLLR-GYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDY-HSLVNALKGCSGLFY  104 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~-~~~~~~~~~~d~Vih  104 (294)
                      |+|||||||||||+++++.|+++ |++|++++|+..+...+.       ...+++++.+|++|. +.+.++++++|+|||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih   73 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIHSEWIEYHVKKCDVVLP   73 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-------TCTTEEEEECCTTTCSHHHHHHHHHCSEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh-------cCCCeEEEeccccCcHHHHHhhccCCCEEEE
Confidence            58999999999999999999998 899999999875543321       134799999999984 568888999999999


Q ss_pred             cCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChh-hhhhcc
Q 043792          105 SFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVN-LCKKFK  181 (294)
Q Consensus       105 ~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~~  181 (294)
                      +|+.....  .......+++|+.++.+++++|.+. + ++|||+||.+  +|+...    ..+++|+++.... +...+.
T Consensus        74 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~v~~SS~~--v~g~~~----~~~~~e~~~~~~~~~~~~~~  145 (345)
T 2bll_A           74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPSTSE--VYGMCS----DKYFDEDHSNLIVGPVNKPR  145 (345)
T ss_dssp             CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECCGG--GGBTCC----CSSBCTTTCCCBCCCTTCGG
T ss_pred             cccccCccchhcCHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEEecHH--HcCCCC----CCCcCCcccccccCcccCcc
Confidence            99875421  1223478899999999999999988 7 8999999986  455433    3367777654211 011122


Q ss_pred             chhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCC-------Cc--------cccccc-cccCC--CccccccH
Q 043792          182 LWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTIS-------NP--------YLKGAA-EMYED--GVMASVDL  243 (294)
Q Consensus       182 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~-------~~--------~~~~~~-~~~~~--~~~~~v~v  243 (294)
                      +.|+.+|.++|.+++.++.+.+++++++||+++|||.....       ..        +.++.+ ..+++  ....|+|+
T Consensus       146 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v  225 (345)
T 2bll_A          146 WIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDI  225 (345)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEH
T ss_pred             cccHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEH
Confidence            68999999999999999888899999999999999985421       00        233443 33444  33459999


Q ss_pred             HHHHHHHHhhhcCcC--CCC-eEEeecc--cccHHHHHHHHHHHhCCCC
Q 043792          244 RFYVDAHICVFEDVS--SYG-RYLCFNH--VINCNEDAMKLARMLLPPS  287 (294)
Q Consensus       244 ~D~a~~i~~~~~~~~--~~~-~~~~~~~--~~s~~~~~~~~~~~~~~~~  287 (294)
                      +|+|++++.+++++.  ..+ .|++.++  .+|+.|+++.+.+.+|.+.
T Consensus       226 ~Dva~a~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~  274 (345)
T 2bll_A          226 RDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHP  274 (345)
T ss_dssp             HHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCT
T ss_pred             HHHHHHHHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCc
Confidence            999999999998764  344 5877664  6999999999999987653

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=100.00  E-value=6.5e-36  Score=265.07  Aligned_cols=250  Identities=18%  Similarity=0.142  Sum_probs=186.4

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChh-----------------hHHHHHhhccCCCCeEEEECC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQ-----------------CIEEELINYNEEKKLKVFQAD   85 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------------~l~~~~~~~~~~~~v~~~~~D   85 (294)
                      ...+++||||||+||||++|++.|+++|++|++++|......                 .+...  ......+++++.+|
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~v~~~~~D   85 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRW--KALTGKSIELYVGD   85 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHH--HHHHCCCCEEEESC
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhH--hhccCCceEEEECC
Confidence            356799999999999999999999999999999988632211                 11110  00113478999999


Q ss_pred             CCChhHHHHHhcc--CCEEEecCCCCCCCC--cch---hhhHhHhhHHHHHHHHHHHhcCCC-cEEEEecCcceeeeCCC
Q 043792           86 PFDYHSLVNALKG--CSGLFYSFEPPSDHS--TYD---ELTAEVETMAAHNVLEACAQTNTV-DKVVFTSSLTAVVWNNH  157 (294)
Q Consensus        86 l~~~~~~~~~~~~--~d~Vih~a~~~~~~~--~~~---~~~~~~n~~~~~~ll~~~~~~~~~-~~~v~~Ss~~~~~~~~~  157 (294)
                      ++|.+.+.+++++  +|+|||+|+......  ...   ...+++|+.++.+++++|.+. ++ ++|||+||.+  +|+..
T Consensus        86 l~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~~~~V~~SS~~--vyg~~  162 (404)
T 1i24_A           86 ICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF-GEECHLVKLGTMG--EYGTP  162 (404)
T ss_dssp             TTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEECCGG--GGCCC
T ss_pred             CCCHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHh-CCCcEEEEeCcHH--HhCCC
Confidence            9999999999987  999999999754211  111   147899999999999999988 76 5999999986  45433


Q ss_pred             CCCCCCCCCCCCC--------------CCChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCC-
Q 043792          158 RDNPTSHDFDERN--------------WSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTIS-  222 (294)
Q Consensus       158 ~~~~~~~~~~e~~--------------~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~-  222 (294)
                      .    . +++|+.              +..+.      +.|+.+|.++|.+++.++.+++++++++||++||||..... 
T Consensus       163 ~----~-~~~E~~~~~~~~~~~~~~~~~~~~~------~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~  231 (404)
T 1i24_A          163 N----I-DIEEGYITITHNGRTDTLPYPKQAS------SFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETE  231 (404)
T ss_dssp             S----S-CBCSSEEEEEETTEEEEEECCCCCC------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGG
T ss_pred             C----C-CCCccccccccccccccccCCCCCC------ChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccc
Confidence            2    2 455542              22223      78999999999999999888899999999999999985320 


Q ss_pred             ---------------Cc--------cccccc-cccCCCc--cccccHHHHHHHHHhhhcCcCCCC---eEEeecccccHH
Q 043792          223 ---------------NP--------YLKGAA-EMYEDGV--MASVDLRFYVDAHICVFEDVSSYG---RYLCFNHVINCN  273 (294)
Q Consensus       223 ---------------~~--------~~~~~~-~~~~~~~--~~~v~v~D~a~~i~~~~~~~~~~~---~~~~~~~~~s~~  273 (294)
                                     ..        +..|.+ .+++++.  ..|+|++|+|++++.+++.+...+   .|+++++++++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~~~~s~~  311 (404)
T 1i24_A          232 MHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVN  311 (404)
T ss_dssp             GSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHH
T ss_pred             cccccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECCCCCcHH
Confidence                           11        233444 3455543  459999999999999998765444   588777789999


Q ss_pred             HHHHHHHHH---hCCCCC
Q 043792          274 EDAMKLARM---LLPPSD  288 (294)
Q Consensus       274 ~~~~~~~~~---~~~~~~  288 (294)
                      |+++.+.+.   +|.+.+
T Consensus       312 e~~~~i~~~~~~~g~~~~  329 (404)
T 1i24_A          312 ELASLVTKAGSKLGLDVK  329 (404)
T ss_dssp             HHHHHHHHHHHTTTCCCC
T ss_pred             HHHHHHHHHHHhhCCCcc
Confidence            999999997   666543

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=100.00  E-value=2e-35  Score=250.07  Aligned_cols=224  Identities=16%  Similarity=0.125  Sum_probs=181.2

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      +||+|||||| ||||++|++.|+++|++|++++|++.+...+..        .+++++.+|+.|.+     +.++|+|||
T Consensus         4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~D~~d~~-----~~~~d~vi~   69 (286)
T 3ius_A            4 MTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA--------SGAEPLLWPGEEPS-----LDGVTHLLI   69 (286)
T ss_dssp             -CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH--------TTEEEEESSSSCCC-----CTTCCEEEE
T ss_pred             CcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh--------CCCeEEEecccccc-----cCCCCEEEE
Confidence            4689999998 999999999999999999999999876655554        37999999999854     789999999


Q ss_pred             cCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccch
Q 043792          105 SFEPPSDHSTYDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLW  183 (294)
Q Consensus       105 ~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  183 (294)
                      +|+.....           ...+.++++++++. .++++|||+||.+  +|+...    ..+++|+++..+.      +.
T Consensus        70 ~a~~~~~~-----------~~~~~~l~~a~~~~~~~~~~~v~~Ss~~--vyg~~~----~~~~~E~~~~~p~------~~  126 (286)
T 3ius_A           70 STAPDSGG-----------DPVLAALGDQIAARAAQFRWVGYLSTTA--VYGDHD----GAWVDETTPLTPT------AA  126 (286)
T ss_dssp             CCCCBTTB-----------CHHHHHHHHHHHHTGGGCSEEEEEEEGG--GGCCCT----TCEECTTSCCCCC------SH
T ss_pred             CCCccccc-----------cHHHHHHHHHHHhhcCCceEEEEeecce--ecCCCC----CCCcCCCCCCCCC------CH
Confidence            99976531           12357889999883 2889999999986  555544    5578999888777      89


Q ss_pred             hHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCccccccc-cccCC-CccccccHHHHHHHHHhhhcCcCCCC
Q 043792          184 HGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAA-EMYED-GVMASVDLRFYVDAHICVFEDVSSYG  261 (294)
Q Consensus       184 Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~~~~~~~-~~~~~-~~~~~v~v~D~a~~i~~~~~~~~~~~  261 (294)
                      |+.+|.++|++++.+   .+++++++||+++||+.......+.++.. .+.++ ....|+|++|+|++++.+++++..++
T Consensus       127 Y~~sK~~~E~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~g~  203 (286)
T 3ius_A          127 RGRWRVMAEQQWQAV---PNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMARPDPGA  203 (286)
T ss_dssp             HHHHHHHHHHHHHHS---TTCCEEEEEECEEEBTTBSSSTTSSSSCCCEEECTTCCBCEEEHHHHHHHHHHHHHSCCTTC
T ss_pred             HHHHHHHHHHHHHhh---cCCCEEEEeccceECCCchHHHHHhcCCccccCCCCcccceEEHHHHHHHHHHHHhCCCCCC
Confidence            999999999999986   58999999999999998544333555654 33333 34459999999999999999887655


Q ss_pred             eEEee-cccccHHHHHHHHHHHhCCCCC
Q 043792          262 RYLCF-NHVINCNEDAMKLARMLLPPSD  288 (294)
Q Consensus       262 ~~~~~-~~~~s~~~~~~~~~~~~~~~~~  288 (294)
                      .|++. ++.+++.|+++.+.+.+|.+..
T Consensus       204 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~  231 (286)
T 3ius_A          204 VYNVCDDEPVPPQDVIAYAAELQGLPLP  231 (286)
T ss_dssp             EEEECCSCCBCHHHHHHHHHHHHTCCCC
T ss_pred             EEEEeCCCCccHHHHHHHHHHHcCCCCC
Confidence            78765 5679999999999999997754

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=100.00  E-value=2.2e-36  Score=259.28  Aligned_cols=236  Identities=13%  Similarity=0.034  Sum_probs=183.2

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc--CC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG--CS  100 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d  100 (294)
                      +.+||+|||||||||||++|++.|+++|+      +...             ....++++.+|++|.+.+.+++++  +|
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~-------------~~~~~~~~~~D~~d~~~~~~~~~~~~~d   63 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGE-------------DWVFVSSKDADLTDTAQTRALFEKVQPT   63 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC-------------EEEECCTTTCCTTSHHHHHHHHHHSCCS
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------cccc-------------cccccCceecccCCHHHHHHHHhhcCCC
Confidence            34678999999999999999999999998      1110             011344557899999999999987  99


Q ss_pred             EEEecCCCCCC---CCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCC----CCC
Q 043792          101 GLFYSFEPPSD---HSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERN----WSD  173 (294)
Q Consensus       101 ~Vih~a~~~~~---~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~----~~~  173 (294)
                      +|||+|+....   ........+++|+.++.+++++|++. ++++|||+||.+  +|+...    ..+++|++    +..
T Consensus        64 ~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~v~~SS~~--vyg~~~----~~~~~E~~~~~~~~~  136 (319)
T 4b8w_A           64 HVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEV-GARKVVSCLSTC--IFPDKT----TYPIDETMIHNGPPH  136 (319)
T ss_dssp             EEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEECCGG--GSCSSC----CSSBCGGGGGBSCCC
T ss_pred             EEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEEcchh--hcCCCC----CCCccccccccCCCC
Confidence            99999998542   22334478999999999999999999 899999999986  555544    55788886    333


Q ss_pred             hhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc---------------cccccc-cccCCCc
Q 043792          174 VNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP---------------YLKGAA-EMYEDGV  237 (294)
Q Consensus       174 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~---------------~~~~~~-~~~~~~~  237 (294)
                      +..     .+|+.+|.++|++++.++.+.+++++++||+++|||.......               +..+.+ .+++++.
T Consensus       137 p~~-----~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  211 (319)
T 4b8w_A          137 NSN-----FGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGN  211 (319)
T ss_dssp             SSS-----HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSC
T ss_pred             CCc-----chHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCC
Confidence            331     3699999999999999999899999999999999998643210               123343 4455544


Q ss_pred             --cccccHHHHHHHHHhhhcCcCC-CC-eEEee-cccccHHHHHHHHHHHhCCCCCC
Q 043792          238 --MASVDLRFYVDAHICVFEDVSS-YG-RYLCF-NHVINCNEDAMKLARMLLPPSDT  289 (294)
Q Consensus       238 --~~~v~v~D~a~~i~~~~~~~~~-~~-~~~~~-~~~~s~~~~~~~~~~~~~~~~~~  289 (294)
                        ..|+|++|+|++++.+++++.. .+ .|++. ++.+++.|+++.+.+.+|.+.++
T Consensus       212 ~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~  268 (319)
T 4b8w_A          212 PRRQFIYSLDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEV  268 (319)
T ss_dssp             CEECEEEHHHHHHHHHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSCE
T ss_pred             eeEEEEeHHHHHHHHHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCCcE
Confidence              3599999999999999987433 33 47654 57899999999999999976543

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=100.00  E-value=3.1e-35  Score=255.67  Aligned_cols=247  Identities=17%  Similarity=0.103  Sum_probs=188.7

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC-------hhhHHHHHhhc-cCCCCeEEEECCCCChhHHHHHhc
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK-------LQCIEEELINY-NEEKKLKVFQADPFDYHSLVNALK   97 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-------~~~l~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~   97 (294)
                      +|+||||||+||||++|++.|+++|++|++++|+...       .+.+..   +. ....++.++.+|++|.+++.++++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~---l~~~~~~~~~~~~~D~~~~~~~~~~~~   78 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRR---VQELTGRSVEFEEMDILDQGALQRLFK   78 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHH---HHHHHTCCCEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHH---HHhccCCceEEEECCCCCHHHHHHHHH
Confidence            5799999999999999999999999999999986543       122211   11 013478999999999999999998


Q ss_pred             --cCCEEEecCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSD  173 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~  173 (294)
                        ++|+|||+|+.....  .......+++|+.++.++++++++. ++++|||+||.+  +|+...    ..+++|+++..
T Consensus        79 ~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~--~~g~~~----~~~~~E~~~~~  151 (348)
T 1ek6_A           79 KYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVFSSSAT--VYGNPQ----YLPLDEAHPTG  151 (348)
T ss_dssp             HCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGG--GGCSCS----SSSBCTTSCCC
T ss_pred             hcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHh-CCCEEEEECcHH--HhCCCC----CCCcCCCCCCC
Confidence              799999999975421  1223478899999999999999988 889999999986  455433    45788988766


Q ss_pred             h-hhhhhccchhHhhHHHHHHHHHHHHHh-cCCeEEEEecCceeCCCCCC------C---Cc-------c-c-cccc-cc
Q 043792          174 V-NLCKKFKLWHGLSKTLAEKTAWALAMD-RGISMVSINGGLVMGPDVTI------S---NP-------Y-L-KGAA-EM  232 (294)
Q Consensus       174 ~-~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~~~~~~ilrp~~i~G~~~~~------~---~~-------~-~-~~~~-~~  232 (294)
                      + .      +.|+.+|.++|.+++.++.+ .+++++++||+++|||....      .   ..       . . .+.. .+
T Consensus       152 p~~------~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (348)
T 1ek6_A          152 GCT------NPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNV  225 (348)
T ss_dssp             CCS------SHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEE
T ss_pred             CCC------CchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEE
Confidence            5 4      78999999999999998877 23999999999999995210      0   11       1 1 2222 22


Q ss_pred             cC------C--CccccccHHHHHHHHHhhhcCc--CCC-CeEEee-cccccHHHHHHHHHHHhCCCCC
Q 043792          233 YE------D--GVMASVDLRFYVDAHICVFEDV--SSY-GRYLCF-NHVINCNEDAMKLARMLLPPSD  288 (294)
Q Consensus       233 ~~------~--~~~~~v~v~D~a~~i~~~~~~~--~~~-~~~~~~-~~~~s~~~~~~~~~~~~~~~~~  288 (294)
                      ++      +  ....|+|++|+|++++.+++++  ..+ +.|+++ ++++++.|+++.+.+.+|.+.+
T Consensus       226 ~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~  293 (348)
T 1ek6_A          226 FGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIP  293 (348)
T ss_dssp             ECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCC
T ss_pred             eCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCCCc
Confidence            22      2  2345999999999999999765  233 358765 5679999999999999987654

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=100.00  E-value=1.2e-36  Score=261.64  Aligned_cols=236  Identities=15%  Similarity=0.039  Sum_probs=181.6

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC----hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccC
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK----LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGC   99 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~   99 (294)
                      .++|+|||||||||||++|++.|+++|++|++++|+...    ...+..    .....+++++.+|+.          ++
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~~Dl~----------~~   70 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGK----FLEKPVLELEERDLS----------DV   70 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSE----EECSCGGGCCHHHHT----------TE
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhh----hccCCCeeEEeCccc----------cC
Confidence            457899999999999999999999999999999997652    111111    011123444445543          88


Q ss_pred             CEEEecCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhh
Q 043792          100 SGLFYSFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLC  177 (294)
Q Consensus       100 d~Vih~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~  177 (294)
                      |+|||+|+.....  .......++ |+.++.+++++|++. ++++|||+||.+  +|+...    ..+++|+++..+.  
T Consensus        71 d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~-~v~~~v~~SS~~--v~~~~~----~~~~~E~~~~~p~--  140 (321)
T 3vps_A           71 RLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSV-GVPKVVVGSTCE--VYGQAD----TLPTPEDSPLSPR--  140 (321)
T ss_dssp             EEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHH-TCCEEEEEEEGG--GGCSCS----SSSBCTTSCCCCC--
T ss_pred             CEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHc-CCCeEEEecCHH--HhCCCC----CCCCCCCCCCCCC--
Confidence            9999999976531  122235667 999999999999999 899999999986  555544    5588999887776  


Q ss_pred             hhccchhHhhHHHHHHHHHHHHHhcCC-eEEEEecCceeCCCCCCCCc-------cccccc-cccCCC--ccccccHHHH
Q 043792          178 KKFKLWHGLSKTLAEKTAWALAMDRGI-SMVSINGGLVMGPDVTISNP-------YLKGAA-EMYEDG--VMASVDLRFY  246 (294)
Q Consensus       178 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~ilrp~~i~G~~~~~~~~-------~~~~~~-~~~~~~--~~~~v~v~D~  246 (294)
                          +.|+.+|.++|.+++.++.++++ +++++||+++|||.......       +..+.. ..++++  ...|+|++|+
T Consensus       141 ----~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dv  216 (321)
T 3vps_A          141 ----SPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDV  216 (321)
T ss_dssp             ----SHHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHH
T ss_pred             ----ChhHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHH
Confidence                89999999999999999988899 99999999999998654221       233443 444544  3459999999


Q ss_pred             HHHHHhhhcCcCCCCeEEee-cccccHHHHHHHHHHHhCCCCCC
Q 043792          247 VDAHICVFEDVSSYGRYLCF-NHVINCNEDAMKLARMLLPPSDT  289 (294)
Q Consensus       247 a~~i~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~  289 (294)
                      |++++.++.++..+ .|++. ++.+++.|+++.+. .+|.+.++
T Consensus       217 a~~~~~~~~~~~~g-~~~i~~~~~~s~~e~~~~i~-~~g~~~~~  258 (321)
T 3vps_A          217 VDKLVALANRPLPS-VVNFGSGQSLSVNDVIRILQ-ATSPAAEV  258 (321)
T ss_dssp             HHHHHHGGGSCCCS-EEEESCSCCEEHHHHHHHHH-TTCTTCEE
T ss_pred             HHHHHHHHhcCCCC-eEEecCCCcccHHHHHHHHH-HhCCCCcc
Confidence            99999999987765 88765 56799999999999 89877543

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=100.00  E-value=7.2e-36  Score=260.71  Aligned_cols=239  Identities=13%  Similarity=0.105  Sum_probs=188.5

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      .++|+|||||||||||++|++.|+++| ++|++++|+..... +..   .    .++. +.+|++|.+.+..+++     
T Consensus        44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~---~----~~~~-~~~d~~~~~~~~~~~~~~~~~  114 (357)
T 2x6t_A           44 IEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FVN---L----VDLN-IADYMDKEDFLIQIMAGEEFG  114 (357)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-GGG---T----TTSC-CSEEEEHHHHHHHHHTTCCCS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-hhc---c----cCce-EeeecCcHHHHHHHHhhcccC
Confidence            345899999999999999999999999 99999999765421 111   1    1233 6789999999999887     


Q ss_pred             cCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhh
Q 043792           98 GCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLC  177 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~  177 (294)
                      ++|+|||+|+.........+..+++|+.++.+++++|.+. ++ +|||+||.+  +|+...    ..+++|+.+..+.  
T Consensus       115 ~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~-~~-r~V~~SS~~--v~g~~~----~~~~~E~~~~~p~--  184 (357)
T 2x6t_A          115 DVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAA--TYGGRT----SDFIESREYEKPL--  184 (357)
T ss_dssp             SCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEEGG--GGCSCS----SCCCSSGGGCCCS--
T ss_pred             CCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEcchH--HhCCCC----CCCcCCcCCCCCC--
Confidence            5999999999866544455688999999999999999998 88 999999986  455433    3478888776665  


Q ss_pred             hhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCC---c--------cccccc-cccCCCcc---cccc
Q 043792          178 KKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISN---P--------YLKGAA-EMYEDGVM---ASVD  242 (294)
Q Consensus       178 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~---~--------~~~~~~-~~~~~~~~---~~v~  242 (294)
                          +.|+.+|.++|.+++.++.+.+++++++||++||||......   .        +.++.. ..++++..   .|+|
T Consensus       185 ----~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  260 (357)
T 2x6t_A          185 ----NVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVY  260 (357)
T ss_dssp             ----SHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEE
T ss_pred             ----ChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEE
Confidence                889999999999999998888999999999999999854211   1        223443 34555544   5999


Q ss_pred             HHHHHHHHHhhhcCcCCCCeEEee-cccccHHHHHHHHHHHhCCC
Q 043792          243 LRFYVDAHICVFEDVSSYGRYLCF-NHVINCNEDAMKLARMLLPP  286 (294)
Q Consensus       243 v~D~a~~i~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~  286 (294)
                      ++|+|++++.+++++. ++.|++. ++.+++.|+++.+.+.+|.+
T Consensus       261 v~Dva~ai~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~  304 (357)
T 2x6t_A          261 VGDVADVNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKKG  304 (357)
T ss_dssp             HHHHHHHHHHHHHHCC-CEEEEESCSCCEEHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHhcCC-CCeEEecCCCcccHHHHHHHHHHHcCCC
Confidence            9999999999998766 5568775 46799999999999999876

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=100.00  E-value=7.1e-35  Score=257.89  Aligned_cols=254  Identities=17%  Similarity=0.076  Sum_probs=189.8

Q ss_pred             CCeEEEeCCCchHHHHHHHHHH-HCCCeEEEEecCCCC---------hhhHHHHHh-hccC--CCC---eEEEECCCCCh
Q 043792           26 TKTVCVMDASGHFASALVRRLL-LRGYTVHAALHNHGK---------LQCIEEELI-NYNE--EKK---LKVFQADPFDY   89 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~---------~~~l~~~~~-~~~~--~~~---v~~~~~Dl~~~   89 (294)
                      +|+||||||+||||++|++.|+ ++|++|++++|+...         .+.+...+. ....  ..+   +.++.+|++|.
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            4699999999999999999999 999999999997654         233321100 1111  124   89999999999


Q ss_pred             hHHHHHhc--c-CCEEEecCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCC---CC
Q 043792           90 HSLVNALK--G-CSGLFYSFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRD---NP  161 (294)
Q Consensus        90 ~~~~~~~~--~-~d~Vih~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~---~~  161 (294)
                      +.+.++++  + +|+|||+|+.....  .......+++|+.++.+++++|.+. ++++|||+||.++  |+....   .+
T Consensus        82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~~iv~~SS~~v--~g~~~~~~~~~  158 (397)
T 1gy8_A           82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCDKIIFSSSAAI--FGNPTMGSVST  158 (397)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGG--TBSCCC-----
T ss_pred             HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHh-CCCEEEEECCHHH--hCCCCcccccc
Confidence            99999987  6 99999999976432  1223478999999999999999988 8899999999863  432210   00


Q ss_pred             CCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCC--------CCc----c----
Q 043792          162 TSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTI--------SNP----Y----  225 (294)
Q Consensus       162 ~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~--------~~~----~----  225 (294)
                      ...+++|+++..+.      +.|+.+|.++|.+++.++.+++++++++||+++|||....        ...    +    
T Consensus       159 ~~~~~~E~~~~~p~------~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~  232 (397)
T 1gy8_A          159 NAEPIDINAKKSPE------SPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRV  232 (397)
T ss_dssp             CCCCBCTTSCCBCS------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHH
T ss_pred             cccCcCccCCCCCC------CchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHH
Confidence            12378888876665      8899999999999999998889999999999999997421        011    1    


Q ss_pred             ----cccc------------c-cccC------CC--ccccccHHHHHHHHHhhhcCcCC-C--------CeEEee-cccc
Q 043792          226 ----LKGA------------A-EMYE------DG--VMASVDLRFYVDAHICVFEDVSS-Y--------GRYLCF-NHVI  270 (294)
Q Consensus       226 ----~~~~------------~-~~~~------~~--~~~~v~v~D~a~~i~~~~~~~~~-~--------~~~~~~-~~~~  270 (294)
                          ..+.            . .+++      ++  ...|||++|+|++++.+++.+.. +        +.|+++ ++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~  312 (397)
T 1gy8_A          233 MSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGY  312 (397)
T ss_dssp             HHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCE
T ss_pred             HHHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcc
Confidence                1222            1 2222      33  34599999999999999876432 2        458775 5679


Q ss_pred             cHHHHHHHHHHHhCCCCC
Q 043792          271 NCNEDAMKLARMLLPPSD  288 (294)
Q Consensus       271 s~~~~~~~~~~~~~~~~~  288 (294)
                      ++.|+++.+.+.+|.+.+
T Consensus       313 s~~e~~~~i~~~~g~~~~  330 (397)
T 1gy8_A          313 SVREVIEVARKTTGHPIP  330 (397)
T ss_dssp             EHHHHHHHHHHHHCCCCC
T ss_pred             cHHHHHHHHHHHhCCCCC
Confidence            999999999999987654

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=100.00  E-value=2.7e-35  Score=257.30  Aligned_cols=249  Identities=15%  Similarity=0.096  Sum_probs=189.1

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHC-CCeEEEEecCC--CChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCCE
Q 043792           27 KTVCVMDASGHFASALVRRLLLR-GYTVHAALHNH--GKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCSG  101 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~--~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~  101 (294)
                      ||||||||+||||++|++.|+++ |++|++++|+.  ...+.+..   . ....++.++.+|++|.+.+.++++  ++|+
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   76 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSD---I-SESNRYNFEHADICDSAEITRIFEQYQPDA   76 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTT---T-TTCTTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhh---h-hcCCCeEEEECCCCCHHHHHHHHhhcCCCE
Confidence            57999999999999999999998 79999999975  22333322   1 113478999999999999999998  8999


Q ss_pred             EEecCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhc-CCCc-------EEEEecCcceeeeCCCCC------CCCCCC
Q 043792          102 LFYSFEPPSDH--STYDELTAEVETMAAHNVLEACAQT-NTVD-------KVVFTSSLTAVVWNNHRD------NPTSHD  165 (294)
Q Consensus       102 Vih~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~-------~~v~~Ss~~~~~~~~~~~------~~~~~~  165 (294)
                      |||+|+.....  ....+..+++|+.++.++++++.+. .+++       +|||+||.+  +|+....      .+...+
T Consensus        77 vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~--v~g~~~~~~~~~~~~~~~~  154 (361)
T 1kew_A           77 VMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDE--VYGDLPHPDEVENSVTLPL  154 (361)
T ss_dssp             EEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGG--GGCCCCCGGGSCTTSCCCC
T ss_pred             EEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHH--HhCCCcccccccccccCCC
Confidence            99999976421  1123478999999999999999875 2455       999999986  3443210      000116


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-------cccccc-cccCCCc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-------YLKGAA-EMYEDGV  237 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-------~~~~~~-~~~~~~~  237 (294)
                      ++|+.+..+.      +.|+.+|.++|.+++.++.+++++++++||++||||.......       +.++.. ..++++.
T Consensus       155 ~~E~~~~~~~------~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (361)
T 1kew_A          155 FTETTAYAPS------SPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGD  228 (361)
T ss_dssp             BCTTSCCCCC------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSC
T ss_pred             CCCCCCCCCC------CccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCc
Confidence            7787766655      8899999999999999998889999999999999998543221       223433 3444443


Q ss_pred             --cccccHHHHHHHHHhhhcCcCCCCeEEeec-ccccHHHHHHHHHHHhCCCC
Q 043792          238 --MASVDLRFYVDAHICVFEDVSSYGRYLCFN-HVINCNEDAMKLARMLLPPS  287 (294)
Q Consensus       238 --~~~v~v~D~a~~i~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~  287 (294)
                        ..|+|++|+|++++.+++.+..++.|++.+ +.+++.|+++.+++.+|.+.
T Consensus       229 ~~~~~i~v~Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~  281 (361)
T 1kew_A          229 QIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIV  281 (361)
T ss_dssp             CEEEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHS
T ss_pred             eeEeeEEHHHHHHHHHHHHhCCCCCCEEEecCCCeeeHHHHHHHHHHHhCCcC
Confidence              459999999999999997665444687765 56999999999999887543

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=100.00  E-value=8e-35  Score=252.72  Aligned_cols=247  Identities=15%  Similarity=0.174  Sum_probs=183.9

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCCh-hhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKL-QCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~  101 (294)
                      ..++|+|||||||||||++|++.|+++|++|++++|+.... ..+..   . ....+++++.+|+.+..     +.++|+
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~-~~~~~~~~~~~D~~~~~-----~~~~d~   94 (343)
T 2b69_A           24 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEH---W-IGHENFELINHDVVEPL-----YIEVDQ   94 (343)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGG---G-TTCTTEEEEECCTTSCC-----CCCCSE
T ss_pred             ccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhh---h-ccCCceEEEeCccCChh-----hcCCCE
Confidence            34578999999999999999999999999999999975432 11111   1 12347899999998763     568999


Q ss_pred             EEecCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhh
Q 043792          102 LFYSFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKK  179 (294)
Q Consensus       102 Vih~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~  179 (294)
                      |||+|+.....  .......+++|+.++.+++++|.+. ++ +|||+||.+  +|+...    ..+++|+.+....+. .
T Consensus        95 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~--v~g~~~----~~~~~E~~~~~~~~~-~  165 (343)
T 2b69_A           95 IYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-RLLLASTSE--VYGDPE----VHPQSEDYWGHVNPI-G  165 (343)
T ss_dssp             EEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEEEEGG--GGBSCS----SSSBCTTCCCBCCSS-S
T ss_pred             EEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CC-cEEEECcHH--HhCCCC----CCCCcccccccCCCC-C
Confidence            99999975421  2234477899999999999999998 76 999999986  455433    346777743211110 1


Q ss_pred             ccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCC-c--------cccccc-cccCCC--ccccccHHHHH
Q 043792          180 FKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISN-P--------YLKGAA-EMYEDG--VMASVDLRFYV  247 (294)
Q Consensus       180 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~-~--------~~~~~~-~~~~~~--~~~~v~v~D~a  247 (294)
                      +.+.|+.+|.++|.+++.++.+.+++++++||+++|||...... .        +.++.. .+++++  ...|+|++|+|
T Consensus       166 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva  245 (343)
T 2b69_A          166 PRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLV  245 (343)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHH
Confidence            12789999999999999998888999999999999999854221 1        223443 345544  34599999999


Q ss_pred             HHHHhhhcCcCCCCeEEee-cccccHHHHHHHHHHHhCCCCC
Q 043792          248 DAHICVFEDVSSYGRYLCF-NHVINCNEDAMKLARMLLPPSD  288 (294)
Q Consensus       248 ~~i~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~  288 (294)
                      ++++.+++.+. ++.|++. ++.+++.|+++.+.+.+|.+.+
T Consensus       246 ~a~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  286 (343)
T 2b69_A          246 NGLVALMNSNV-SSPVNLGNPEEHTILEFAQLIKNLVGSGSE  286 (343)
T ss_dssp             HHHHHHHTSSC-CSCEEESCCCEEEHHHHHHHHHHHHTCCCC
T ss_pred             HHHHHHHhcCC-CCeEEecCCCCCcHHHHHHHHHHHhCCCCC
Confidence            99999987653 4567665 4679999999999999987654

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=6.8e-35  Score=256.18  Aligned_cols=245  Identities=16%  Similarity=0.062  Sum_probs=190.4

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCCh--hhHHHHHhhcc-----CCCCeEEEECCCCChhHHHHHhcc
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKL--QCIEEELINYN-----EEKKLKVFQADPFDYHSLVNALKG   98 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~l~~~~~~~~-----~~~~v~~~~~Dl~~~~~~~~~~~~   98 (294)
                      +|+||||||+||||++|++.|+++|++|++++|+....  ..+..   ...     ...++.++.+|++|.+++.+++++
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~  100 (375)
T 1t2a_A           24 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEH---LYKNPQAHIEGNMKLHYGDLTDSTCLVKIINE  100 (375)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGG---GC---------CEEEEECCTTCHHHHHHHHHH
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHH---HhhhhccccCCCceEEEccCCCHHHHHHHHHh
Confidence            47999999999999999999999999999999976531  11111   100     124789999999999999999986


Q ss_pred             --CCEEEecCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCC---cEEEEecCcceeeeCCCCCCCCCCCCCCCCC
Q 043792           99 --CSGLFYSFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTV---DKVVFTSSLTAVVWNNHRDNPTSHDFDERNW  171 (294)
Q Consensus        99 --~d~Vih~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~---~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~  171 (294)
                        +|+|||||+.....  .......+++|+.++.++++++.+. ++   ++|||+||.+  +|+...    ..+++|+++
T Consensus       101 ~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~~~~iv~~SS~~--~~~~~~----~~~~~E~~~  173 (375)
T 1t2a_A          101 VKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC-GLINSVKFYQASTSE--LYGKVQ----EIPQKETTP  173 (375)
T ss_dssp             HCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEEEEEEEGG--GTCSCS----SSSBCTTSC
T ss_pred             cCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCccceEEEecchh--hhCCCC----CCCCCccCC
Confidence              69999999975432  1223478899999999999999988 76   7999999986  455433    447888887


Q ss_pred             CChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc----------cccccc--cccCCC--c
Q 043792          172 SDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP----------YLKGAA--EMYEDG--V  237 (294)
Q Consensus       172 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~----------~~~~~~--~~~~~~--~  237 (294)
                      ..+.      +.|+.+|.++|.+++.++.+++++++++||+++|||.......          +..|..  ..++++  .
T Consensus       174 ~~~~------~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~  247 (375)
T 1t2a_A          174 FYPR------SPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAK  247 (375)
T ss_dssp             CCCC------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCE
T ss_pred             CCCC------ChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCce
Confidence            7665      8899999999999999998889999999999999997432210          123432  233443  3


Q ss_pred             cccccHHHHHHHHHhhhcCcCCCCeEEee-cccccHHHHHHHHHHHhCCCC
Q 043792          238 MASVDLRFYVDAHICVFEDVSSYGRYLCF-NHVINCNEDAMKLARMLLPPS  287 (294)
Q Consensus       238 ~~~v~v~D~a~~i~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~  287 (294)
                      ..|+|++|+|++++.+++++. .+.|++. ++.+++.|+++.+.+.+|.+.
T Consensus       248 ~~~i~v~Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~  297 (375)
T 1t2a_A          248 RDWGHAKDYVEAMWLMLQNDE-PEDFVIATGEVHSVREFVEKSFLHIGKTI  297 (375)
T ss_dssp             ECCEEHHHHHHHHHHHHHSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCE
T ss_pred             eeeEEHHHHHHHHHHHHhcCC-CceEEEeCCCcccHHHHHHHHHHHhCCCc
Confidence            459999999999999998765 3567664 567999999999999998764

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=1e-35  Score=254.62  Aligned_cols=235  Identities=14%  Similarity=0.116  Sum_probs=177.9

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc-----CCE
Q 043792           28 TVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG-----CSG  101 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-----~d~  101 (294)
                      +|||||||||||++|++.|+++| ++|++++|+..... ...   ..    ++. +.+|++|.+.+.+++++     +|+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~---~~----~~~-~~~d~~~~~~~~~~~~~~~~~~~d~   71 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FVN---LV----DLN-IADYMDKEDFLIQIMAGEEFGDVEA   71 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG-GHH---HH----TSC-CSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch-hhh---cC----cce-eccccccHHHHHHHHhccccCCCcE
Confidence            59999999999999999999999 99999999765431 111   11    223 67899999999999875     999


Q ss_pred             EEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhcc
Q 043792          102 LFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFK  181 (294)
Q Consensus       102 Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  181 (294)
                      |||+|+............+++|+.++.++++++.+. ++ +|||+||.+  +|+...    ..+++|+++..+.      
T Consensus        72 vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~--v~g~~~----~~~~~E~~~~~p~------  137 (310)
T 1eq2_A           72 IFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAA--TYGGRT----SDFIESREYEKPL------  137 (310)
T ss_dssp             EEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEEGG--GGTTCC----SCBCSSGGGCCCS------
T ss_pred             EEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEeeHH--HhCCCC----CCCCCCCCCCCCC------
Confidence            999999876544455688999999999999999999 88 999999986  455443    4478888776665      


Q ss_pred             chhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCC---c--------cccccc-cccCCCc---cccccHHHH
Q 043792          182 LWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISN---P--------YLKGAA-EMYEDGV---MASVDLRFY  246 (294)
Q Consensus       182 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~---~--------~~~~~~-~~~~~~~---~~~v~v~D~  246 (294)
                      +.|+.+|.++|.+++.++.+++++++++||+++|||......   .        +.++.+ ..++++.   ..|+|++|+
T Consensus       138 ~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dv  217 (310)
T 1eq2_A          138 NVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDV  217 (310)
T ss_dssp             SHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHH
Confidence            889999999999999998888999999999999999854211   1        233443 3455543   369999999


Q ss_pred             HHHHHhhhcCcCCCCeEEee-cccccHHHHHHHHHHHhCCC
Q 043792          247 VDAHICVFEDVSSYGRYLCF-NHVINCNEDAMKLARMLLPP  286 (294)
Q Consensus       247 a~~i~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~  286 (294)
                      |++++.+++++. ++.|++. ++.+++.|+++.+.+.+|.+
T Consensus       218 a~~~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~  257 (310)
T 1eq2_A          218 ADVNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKKG  257 (310)
T ss_dssp             HHHHHHHHHHCC-CEEEEESCSCCBCHHHHHHHC-------
T ss_pred             HHHHHHHHhcCC-CCeEEEeCCCccCHHHHHHHHHHHcCCC
Confidence            999999998766 5568775 46799999999999998876

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=100.00  E-value=8.7e-36  Score=252.49  Aligned_cols=220  Identities=15%  Similarity=0.067  Sum_probs=180.8

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCCEEEe
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCSGLFY  104 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~Vih  104 (294)
                      |+|||||||||||+++++.|+++|++|++++|..                       +|+.|.+.+.++++  ++|+|||
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-----------------------~D~~d~~~~~~~~~~~~~d~vi~   62 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKKL-----------------------LDITNISQVQQVVQEIRPHIIIH   62 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTTT-----------------------SCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEecccc-----------------------cCCCCHHHHHHHHHhcCCCEEEE
Confidence            4999999999999999999999999999999842                       59999999999998  6999999


Q ss_pred             cCCCCCCCC--cchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccc
Q 043792          105 SFEPPSDHS--TYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL  182 (294)
Q Consensus       105 ~a~~~~~~~--~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  182 (294)
                      +|+......  ......+++|+.++.++++++++. ++ ||||+||.+  +|+...    ..+++|+++..+.      +
T Consensus        63 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~SS~~--vy~~~~----~~~~~E~~~~~p~------~  128 (287)
T 3sc6_A           63 CAAYTKVDQAEKERDLAYVINAIGARNVAVASQLV-GA-KLVYISTDY--VFQGDR----PEGYDEFHNPAPI------N  128 (287)
T ss_dssp             CCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGG--GSCCCC----SSCBCTTSCCCCC------S
T ss_pred             CCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEchhh--hcCCCC----CCCCCCCCCCCCC------C
Confidence            999865322  334588999999999999999999 77 799999986  555444    4589999888776      8


Q ss_pred             hhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-----cccccc-cccCCCccccccHHHHHHHHHhhhcC
Q 043792          183 WHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-----YLKGAA-EMYEDGVMASVDLRFYVDAHICVFED  256 (294)
Q Consensus       183 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-----~~~~~~-~~~~~~~~~~v~v~D~a~~i~~~~~~  256 (294)
                      .|+.+|.++|++++.+.    .+++++||+++|||.......     ...+.. ...++....|+|++|+|++++.++++
T Consensus       129 ~Y~~sK~~~E~~~~~~~----~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  204 (287)
T 3sc6_A          129 IYGASKYAGEQFVKELH----NKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHT  204 (287)
T ss_dssp             HHHHHHHHHHHHHHHHC----SSEEEEEECSEECSSSCCHHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHHhC----CCcEEEeeeeecCCCCCcHHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHhC
Confidence            99999999999998864    478999999999997432111     223443 45566666799999999999999988


Q ss_pred             cCCCCeEEeec-ccccHHHHHHHHHHHhCCCCC
Q 043792          257 VSSYGRYLCFN-HVINCNEDAMKLARMLLPPSD  288 (294)
Q Consensus       257 ~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~  288 (294)
                      +. ++.|++.+ +.+++.|+++.+++.+|.+.+
T Consensus       205 ~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  236 (287)
T 3sc6_A          205 SL-YGTYHVSNTGSCSWFEFAKKIFSYANMKVN  236 (287)
T ss_dssp             CC-CEEEECCCBSCEEHHHHHHHHHHHHTCCCE
T ss_pred             CC-CCeEEEcCCCcccHHHHHHHHHHHcCCCcc
Confidence            77 56787654 569999999999999997644

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=100.00  E-value=9.3e-35  Score=252.21  Aligned_cols=245  Identities=15%  Similarity=0.070  Sum_probs=193.2

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChh--hHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc--CC
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQ--CIEEELINYNEEKKLKVFQADPFDYHSLVNALKG--CS  100 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d  100 (294)
                      ++|+||||||+||||+++++.|+++|++|++++|+.+...  .+..   . ....+++++.+|++|.+++.+++++  +|
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   77 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKE---L-GIENDVKIIHMDLLEFSNIIRTIEKVQPD   77 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHH---T-TCTTTEEECCCCTTCHHHHHHHHHHHCCS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhh---c-cccCceeEEECCCCCHHHHHHHHHhcCCC
Confidence            3589999999999999999999999999999999876532  2222   1 1234789999999999999999986  59


Q ss_pred             EEEecCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCC-cEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhh
Q 043792          101 GLFYSFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTV-DKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLC  177 (294)
Q Consensus       101 ~Vih~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~-~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~  177 (294)
                      +|||||+.....  ....+..+++|+.++.+++++|.+. ++ ++|||+||.+  +|+...    ..+++|+.+..+.  
T Consensus        78 ~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~SS~~--vyg~~~----~~~~~e~~~~~~~--  148 (345)
T 2z1m_A           78 EVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTV-KPDTKFYQASTSE--MFGKVQ----EIPQTEKTPFYPR--  148 (345)
T ss_dssp             EEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTCEEEEEEEGG--GGCSCS----SSSBCTTSCCCCC--
T ss_pred             EEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEEechh--hcCCCC----CCCCCccCCCCCC--
Confidence            999999975421  2234478999999999999999988 76 8999999986  555544    4478888776665  


Q ss_pred             hhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc----------cccccc-c-ccCCC--ccccccH
Q 043792          178 KKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP----------YLKGAA-E-MYEDG--VMASVDL  243 (294)
Q Consensus       178 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~----------~~~~~~-~-~~~~~--~~~~v~v  243 (294)
                          +.|+.+|.++|.+++.++.+++++++++|++++|||+......          +..+.. . .++++  ...|+|+
T Consensus       149 ----~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  224 (345)
T 2z1m_A          149 ----SPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYA  224 (345)
T ss_dssp             ----SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEH
T ss_pred             ----ChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEH
Confidence                8899999999999999998889999999999999998432210          113332 2 34443  3349999


Q ss_pred             HHHHHHHHhhhcCcCCCCeEEee-cccccHHHHHHHHHHHhCCCC
Q 043792          244 RFYVDAHICVFEDVSSYGRYLCF-NHVINCNEDAMKLARMLLPPS  287 (294)
Q Consensus       244 ~D~a~~i~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~  287 (294)
                      +|+|++++.+++++. ++.|++. ++.+++.|+++.+.+.+|.+.
T Consensus       225 ~Dva~a~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  268 (345)
T 2z1m_A          225 PEYVEAMWLMMQQPE-PDDYVIATGETHTVREFVEKAAKIAGFDI  268 (345)
T ss_dssp             HHHHHHHHHHHTSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCE
T ss_pred             HHHHHHHHHHHhCCC-CceEEEeCCCCccHHHHHHHHHHHhCCCc
Confidence            999999999998765 3567664 567999999999999998764

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=100.00  E-value=1.1e-34  Score=250.54  Aligned_cols=236  Identities=16%  Similarity=0.135  Sum_probs=183.7

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCS  100 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d  100 (294)
                      ..++|+||||||+||||++|++.|+++|++|++++|+......+..      ...++.++.+|++|.+++.++++  ++|
T Consensus        17 ~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~l~~v~~~~~Dl~d~~~~~~~~~~~~~D   90 (330)
T 2pzm_A           17 RGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLP------PVAGLSVIEGSVTDAGLLERAFDSFKPT   90 (330)
T ss_dssp             TTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSC------SCTTEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhh------ccCCceEEEeeCCCHHHHHHHHhhcCCC
Confidence            4556899999999999999999999999999999997544221111      11478999999999999999998  899


Q ss_pred             EEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCC--CCCCCCCCChhhhh
Q 043792          101 GLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSH--DFDERNWSDVNLCK  178 (294)
Q Consensus       101 ~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~--~~~e~~~~~~~~~~  178 (294)
                      +|||||+........... +++|+.++.++++++.+. ++++|||+||.+  +|+...    ..  +++|++  .+.   
T Consensus        91 ~vih~A~~~~~~~~~~~~-~~~N~~~~~~l~~a~~~~-~~~~iV~~SS~~--~~~~~~----~~~~~~~E~~--~~~---  157 (330)
T 2pzm_A           91 HVVHSAAAYKDPDDWAED-AATNVQGSINVAKAASKA-GVKRLLNFQTAL--CYGRPA----TVPIPIDSPT--APF---  157 (330)
T ss_dssp             EEEECCCCCSCTTCHHHH-HHHHTHHHHHHHHHHHHH-TCSEEEEEEEGG--GGCSCS----SSSBCTTCCC--CCC---
T ss_pred             EEEECCccCCCccccChh-HHHHHHHHHHHHHHHHHc-CCCEEEEecCHH--HhCCCc----cCCCCcCCCC--CCC---
Confidence            999999976542111224 899999999999999988 889999999986  354432    22  667776  333   


Q ss_pred             hccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc------cccccccccCCC-ccccccHHHHHH-HH
Q 043792          179 KFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP------YLKGAAEMYEDG-VMASVDLRFYVD-AH  250 (294)
Q Consensus       179 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~------~~~~~~~~~~~~-~~~~v~v~D~a~-~i  250 (294)
                         +.|+.+|.++|.+++.+    +++++++||+++|||+......      +..+. ..++++ ...|+|++|+|+ ++
T Consensus       158 ---~~Y~~sK~~~e~~~~~~----~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~Dva~~a~  229 (330)
T 2pzm_A          158 ---TSYGISKTAGEAFLMMS----DVPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQ-KCFCSDTVRDFLDMSDFLAIAD  229 (330)
T ss_dssp             ---SHHHHHHHHHHHHHHTC----SSCEEEEEECEEECTTCCSSHHHHHHHHHHTTC-CCCEESCEECEEEHHHHHHHHH
T ss_pred             ---ChHHHHHHHHHHHHHHc----CCCEEEEeeeeeECcCCCCCHHHHHHHHHHcCC-EEeCCCCEecceeHHHHHHHHH
Confidence               78999999999988875    7999999999999998521110      12333 334433 345999999999 99


Q ss_pred             HhhhcCcCCCCeEEeec-ccccHHHHHHHHHHHhCCC
Q 043792          251 ICVFEDVSSYGRYLCFN-HVINCNEDAMKLARMLLPP  286 (294)
Q Consensus       251 ~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~  286 (294)
                      +.++..+. ++.|++.+ +.+++.|+++.+.+.+|.+
T Consensus       230 ~~~~~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g~~  265 (330)
T 2pzm_A          230 LSLQEGRP-TGVFNVSTGEGHSIKEVFDVVLDYVGAT  265 (330)
T ss_dssp             HHTSTTCC-CEEEEESCSCCEEHHHHHHHHHHHHTCC
T ss_pred             HHHhhcCC-CCEEEeCCCCCCCHHHHHHHHHHHhCCC
Confidence            99998765 44587765 5799999999999999877

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.1e-34  Score=260.41  Aligned_cols=255  Identities=15%  Similarity=0.074  Sum_probs=189.5

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHC---CCeEEEEecCCCChhhHHHHHhhcc-------------CCCCeEEEECCC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLR---GYTVHAALHNHGKLQCIEEELINYN-------------EEKKLKVFQADP   86 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~---g~~V~~~~r~~~~~~~l~~~~~~~~-------------~~~~v~~~~~Dl   86 (294)
                      ...+|+|||||||||||++|+++|+++   |++|++++|+.+....+........             ...++.++.+|+
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl  149 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK  149 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence            456899999999999999999999999   8999999998765432221000100             135899999999


Q ss_pred             C------ChhHHHHHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCC
Q 043792           87 F------DYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDN  160 (294)
Q Consensus        87 ~------~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~  160 (294)
                      +      |.+.+.++++++|+|||||+....  ......+++|+.++.+++++|.+. ++++|||+||.+  +|+...  
T Consensus       150 ~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~--~~~~~~~~~Nv~gt~~ll~aa~~~-~~~~~V~iSS~~--v~~~~~--  222 (478)
T 4dqv_A          150 SEPDLGLDQPMWRRLAETVDLIVDSAAMVNA--FPYHELFGPNVAGTAELIRIALTT-KLKPFTYVSTAD--VGAAIE--  222 (478)
T ss_dssp             TSGGGGCCHHHHHHHHHHCCEEEECCSSCSB--SSCCEEHHHHHHHHHHHHHHHTSS-SCCCEEEEEEGG--GGTTSC--
T ss_pred             CCcccCCCHHHHHHHHcCCCEEEECccccCC--cCHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeehh--hcCccC--
Confidence            8      667899999999999999998765  333478899999999999999998 889999999986  455433  


Q ss_pred             CCCCCCCCCCCCChhhh-----hhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCC--Cc------cc-
Q 043792          161 PTSHDFDERNWSDVNLC-----KKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTIS--NP------YL-  226 (294)
Q Consensus       161 ~~~~~~~e~~~~~~~~~-----~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~--~~------~~-  226 (294)
                        ..+++|+.+..+...     ....+.|+.+|+++|.+++.++.+.+++++++||++|||+.....  +.      ++ 
T Consensus       223 --~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~  300 (478)
T 4dqv_A          223 --PSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVL  300 (478)
T ss_dssp             --TTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHH
T ss_pred             --CCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHH
Confidence              346788776544311     011145999999999999999888899999999999999864211  11      11 


Q ss_pred             ----ccccc-c-c---C-----CCccccccHHHHHHHHHhhhcC----cCCCC-eEEeec-cc--ccHHHHHHHHHHHhC
Q 043792          227 ----KGAAE-M-Y---E-----DGVMASVDLRFYVDAHICVFED----VSSYG-RYLCFN-HV--INCNEDAMKLARMLL  284 (294)
Q Consensus       227 ----~~~~~-~-~---~-----~~~~~~v~v~D~a~~i~~~~~~----~~~~~-~~~~~~-~~--~s~~~~~~~~~~~~~  284 (294)
                          .|..+ . +   +     +..+.|+|++|+|++++.++.+    +...+ .|++.+ +.  +++.|+++.+.+. +
T Consensus       301 ~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~-g  379 (478)
T 4dqv_A          301 SLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA-G  379 (478)
T ss_dssp             HHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT-T
T ss_pred             HHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc-C
Confidence                12211 1 1   1     2345599999999999999875    33333 587654 45  9999999999984 5


Q ss_pred             CCC
Q 043792          285 PPS  287 (294)
Q Consensus       285 ~~~  287 (294)
                      .+.
T Consensus       380 ~~~  382 (478)
T 4dqv_A          380 YPI  382 (478)
T ss_dssp             CSC
T ss_pred             CCc
Confidence            543

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=100.00  E-value=1.1e-34  Score=249.60  Aligned_cols=229  Identities=15%  Similarity=0.135  Sum_probs=181.3

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCCEEE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCSGLF  103 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~Vi  103 (294)
                      +|+||||||+||||++|++.|+++|++|++++|+.                      .+|+.|.+.+.++++  ++|+||
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~----------------------~~D~~d~~~~~~~~~~~~~d~vi   60 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFASERIDQVY   60 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc----------------------cCCccCHHHHHHHHHhcCCCEEE
Confidence            57999999999999999999999999999987753                      159999999999998  899999


Q ss_pred             ecCCCCCCC---CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCC----CChhh
Q 043792          104 YSFEPPSDH---STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNW----SDVNL  176 (294)
Q Consensus       104 h~a~~~~~~---~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~----~~~~~  176 (294)
                      |+|+.....   .......+++|+.++.+++++|.+. ++++|||+||.+  +|+...    ..+++|+++    ..+. 
T Consensus        61 h~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~--vyg~~~----~~~~~E~~~~~~~~~p~-  132 (321)
T 1e6u_A           61 LAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLGSSC--IYPKLA----KQPMAESELLQGTLEPT-  132 (321)
T ss_dssp             ECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGG--GSCTTC----CSSBCGGGTTSSCCCGG-
T ss_pred             EcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccHH--HcCCCC----CCCcCccccccCCCCCC-
Confidence            999976421   1233478899999999999999998 889999999986  455433    347778763    2222 


Q ss_pred             hhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCC----Cc-------ccc----c-cc-cccCCC--c
Q 043792          177 CKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTIS----NP-------YLK----G-AA-EMYEDG--V  237 (294)
Q Consensus       177 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~----~~-------~~~----~-~~-~~~~~~--~  237 (294)
                          .+.|+.+|.++|.+++.++.+++++++++||+++|||.....    ..       +..    | .+ .+++++  .
T Consensus       133 ----~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~  208 (321)
T 1e6u_A          133 ----NEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPM  208 (321)
T ss_dssp             ----GHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCE
T ss_pred             ----CCccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEE
Confidence                158999999999999999888899999999999999986421    10       111    2 22 334444  3


Q ss_pred             cccccHHHHHHHHHhhhcCcCC---------CCeEEee-cccccHHHHHHHHHHHhCCCCC
Q 043792          238 MASVDLRFYVDAHICVFEDVSS---------YGRYLCF-NHVINCNEDAMKLARMLLPPSD  288 (294)
Q Consensus       238 ~~~v~v~D~a~~i~~~~~~~~~---------~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~  288 (294)
                      ..|+|++|+|++++.+++++..         ++.|++. ++.+++.|+++.+.+.+|.+.+
T Consensus       209 ~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~  269 (321)
T 1e6u_A          209 REFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGR  269 (321)
T ss_dssp             ECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSE
T ss_pred             EEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCc
Confidence            4599999999999999987654         3568765 5679999999999999987643

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=6e-34  Score=249.78  Aligned_cols=245  Identities=14%  Similarity=0.047  Sum_probs=187.9

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCCh--hhHHHHHhhcc----CCCCeEEEECCCCChhHHHHHhcc-
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKL--QCIEEELINYN----EEKKLKVFQADPFDYHSLVNALKG-   98 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~l~~~~~~~~----~~~~v~~~~~Dl~~~~~~~~~~~~-   98 (294)
                      ||+||||||+||||+++++.|+++|++|++++|+.+..  +.+..   ...    ...++.++.+|++|.+++.+++++ 
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDH---IYQDPHTCNPKFHLHYGDLSDTSNLTRILREV   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC------------------------CCEEECCCCSSCHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHH---HhhccccCCCceEEEECCCCCHHHHHHHHHhc
Confidence            57999999999999999999999999999999976531  22221   110    124788999999999999999986 


Q ss_pred             -CCEEEecCCCCCCCC--cchhhhHhHhhHHHHHHHHHHHhcCCC---cEEEEecCcceeeeCCCCCCCCCCCCCCCCCC
Q 043792           99 -CSGLFYSFEPPSDHS--TYDELTAEVETMAAHNVLEACAQTNTV---DKVVFTSSLTAVVWNNHRDNPTSHDFDERNWS  172 (294)
Q Consensus        99 -~d~Vih~a~~~~~~~--~~~~~~~~~n~~~~~~ll~~~~~~~~~---~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~  172 (294)
                       +|+|||+|+......  ......+++|+.++.++++++.+. ++   ++||++||.+  +|+...    ..+++|+.+.
T Consensus        78 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~iv~~SS~~--v~g~~~----~~~~~E~~~~  150 (372)
T 1db3_A           78 QPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL-GLEKKTRFYQASTSE--LYGLVQ----EIPQKETTPF  150 (372)
T ss_dssp             CCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEEEEEEEGG--GGTTCC----SSSBCTTSCC
T ss_pred             CCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCCCcEEEEeCChh--hhCCCC----CCCCCccCCC
Confidence             699999999755332  233477899999999999999988 77   7999999986  455443    4478888877


Q ss_pred             ChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc----------cccccc--cccCCC--cc
Q 043792          173 DVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP----------YLKGAA--EMYEDG--VM  238 (294)
Q Consensus       173 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~----------~~~~~~--~~~~~~--~~  238 (294)
                      .+.      +.|+.+|.++|.+++.++.+++++++++|++++|||.......          +.+|..  ..++++  ..
T Consensus       151 ~~~------~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~  224 (372)
T 1db3_A          151 YPR------SPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLR  224 (372)
T ss_dssp             CCC------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEE
T ss_pred             CCC------ChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCcee
Confidence            665      8899999999999999998889999999999999997432210          223432  233443  34


Q ss_pred             ccccHHHHHHHHHhhhcCcCCCCeEEee-cccccHHHHHHHHHHHhCCCC
Q 043792          239 ASVDLRFYVDAHICVFEDVSSYGRYLCF-NHVINCNEDAMKLARMLLPPS  287 (294)
Q Consensus       239 ~~v~v~D~a~~i~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~  287 (294)
                      .|+|++|+|++++.+++++. ++.|++. ++.+++.|+++.+.+.+|.+.
T Consensus       225 ~~i~v~Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~  273 (372)
T 1db3_A          225 DWGHAKDYVKMQWMMLQQEQ-PEDFVIATGVQYSVRQFVEMAAAQLGIKL  273 (372)
T ss_dssp             CCEEHHHHHHHHHHTTSSSS-CCCEEECCCCCEEHHHHHHHHHHTTTEEE
T ss_pred             eeeEHHHHHHHHHHHHhcCC-CceEEEcCCCceeHHHHHHHHHHHhCCCc
Confidence            59999999999999998765 3568665 567999999999999988643

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=100.00  E-value=5.5e-35  Score=238.01  Aligned_cols=208  Identities=13%  Similarity=0.106  Sum_probs=168.3

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCC-hhHHHHHhccCCEEEec
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFD-YHSLVNALKGCSGLFYS  105 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~-~~~~~~~~~~~d~Vih~  105 (294)
                      |+||||||||+||+++++.|+++|++|++++|++++...          ..+++++.+|++| .+++.++++++|+|||+
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~----------~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~   70 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ----------YNNVKAVHFDVDWTPEEMAKQLHGMDAIINV   70 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC----------CTTEEEEECCTTSCHHHHHTTTTTCSEEEEC
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh----------cCCceEEEecccCCHHHHHHHHcCCCEEEEC
Confidence            589999999999999999999999999999998754321          1479999999999 99999999999999999


Q ss_pred             CCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhH
Q 043792          106 FEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHG  185 (294)
Q Consensus       106 a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~  185 (294)
                      |+....      ..+++|+.++.++++++++. ++++||++||.++  ++       ..+..| .+      ..+.+.|+
T Consensus        71 ag~~~~------~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~--~~-------~~~~~e-~~------~~~~~~Y~  127 (219)
T 3dqp_A           71 SGSGGK------SLLKVDLYGAVKLMQAAEKA-EVKRFILLSTIFS--LQ-------PEKWIG-AG------FDALKDYY  127 (219)
T ss_dssp             CCCTTS------SCCCCCCHHHHHHHHHHHHT-TCCEEEEECCTTT--TC-------GGGCCS-HH------HHHTHHHH
T ss_pred             CcCCCC------CcEeEeHHHHHHHHHHHHHh-CCCEEEEECcccc--cC-------CCcccc-cc------cccccHHH
Confidence            998653      46889999999999999998 8899999999753  22       113334 11      12237899


Q ss_pred             hhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHHHHHHHHhhhcCcCCCCe-EE
Q 043792          186 LSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVSSYGR-YL  264 (294)
Q Consensus       186 ~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~i~~~~~~~~~~~~-~~  264 (294)
                      .+|.++|.+++   ...+++++++||+.+||+.....  +      ..++....|++++|+|++++.++.++...++ |+
T Consensus       128 ~sK~~~e~~~~---~~~~i~~~ilrp~~v~g~~~~~~--~------~~~~~~~~~i~~~Dva~~i~~~l~~~~~~g~~~~  196 (219)
T 3dqp_A          128 IAKHFADLYLT---KETNLDYTIIQPGALTEEEATGL--I------DINDEVSASNTIGDVADTIKELVMTDHSIGKVIS  196 (219)
T ss_dssp             HHHHHHHHHHH---HSCCCEEEEEEECSEECSCCCSE--E------EESSSCCCCEEHHHHHHHHHHHHTCGGGTTEEEE
T ss_pred             HHHHHHHHHHH---hccCCcEEEEeCceEecCCCCCc--c------ccCCCcCCcccHHHHHHHHHHHHhCccccCcEEE
Confidence            99999999887   45799999999999999863211  1      1234555699999999999999998776564 88


Q ss_pred             eecccccHHHHHHH
Q 043792          265 CFNHVINCNEDAMK  278 (294)
Q Consensus       265 ~~~~~~s~~~~~~~  278 (294)
                      +.++..+++|+.+.
T Consensus       197 i~~g~~~~~e~~~~  210 (219)
T 3dqp_A          197 MHNGKTAIKEALES  210 (219)
T ss_dssp             EEECSEEHHHHHHT
T ss_pred             eCCCCccHHHHHHH
Confidence            87777999988764

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=100.00  E-value=1.2e-33  Score=244.43  Aligned_cols=234  Identities=15%  Similarity=0.132  Sum_probs=179.3

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc--CC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG--CS  100 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d  100 (294)
                      ..+||+||||||+||||++|++.|+++|++|++++|+.......     +. ...++.++.+|++|.+.+.+++++  +|
T Consensus        18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----l~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~D   91 (333)
T 2q1w_A           18 GSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREH-----LK-DHPNLTFVEGSIADHALVNQLIGDLQPD   91 (333)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG-----SC-CCTTEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             cCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhh-----Hh-hcCCceEEEEeCCCHHHHHHHHhccCCc
Confidence            34678999999999999999999999999999999976432111     10 114789999999999999999988  99


Q ss_pred             EEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeC----CCCCCCCCCCCCCCCCCChhh
Q 043792          101 GLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWN----NHRDNPTSHDFDERNWSDVNL  176 (294)
Q Consensus       101 ~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~----~~~~~~~~~~~~e~~~~~~~~  176 (294)
                      +|||+|+........... +++|+.++.++++++.+. ++++|||+||.+  +|+    ...    . +++|++  .+..
T Consensus        92 ~vih~A~~~~~~~~~~~~-~~~N~~~~~~l~~a~~~~-~~~~iV~~SS~~--~~g~~~~~~~----~-~~~E~~--~p~~  160 (333)
T 2q1w_A           92 AVVHTAASYKDPDDWYND-TLTNCVGGSNVVQAAKKN-NVGRFVYFQTAL--CYGVKPIQQP----V-RLDHPR--NPAN  160 (333)
T ss_dssp             EEEECCCCCSCTTCHHHH-HHHHTHHHHHHHHHHHHT-TCSEEEEEEEGG--GGCSCCCSSS----B-CTTSCC--CCTT
T ss_pred             EEEECceecCCCccCChH-HHHHHHHHHHHHHHHHHh-CCCEEEEECcHH--HhCCCcccCC----C-CcCCCC--CCCC
Confidence            999999976542111224 899999999999999998 889999999986  454    222    3 677776  1110


Q ss_pred             hhhccchhHhhHHHHHHHHHH-HHHhcCCeEEEEecCceeCCCCCCCCc-------cccccccccC-CCccccccHHHHH
Q 043792          177 CKKFKLWHGLSKTLAEKTAWA-LAMDRGISMVSINGGLVMGPDVTISNP-------YLKGAAEMYE-DGVMASVDLRFYV  247 (294)
Q Consensus       177 ~~~~~~~Y~~sK~~~e~~~~~-~~~~~~~~~~ilrp~~i~G~~~~~~~~-------~~~~~~~~~~-~~~~~~v~v~D~a  247 (294)
                           +.|+.+|.++|.+++. ++     +++++||+++|||... ...       +..+. ..++ +....|+|++|+|
T Consensus       161 -----~~Y~~sK~~~E~~~~~s~~-----~~~ilR~~~v~gp~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~Dva  228 (333)
T 2q1w_A          161 -----SSYAISKSANEDYLEYSGL-----DFVTFRLANVVGPRNV-SGPLPIFFQRLSEGK-KCFVTKARRDFVFVKDLA  228 (333)
T ss_dssp             -----CHHHHHHHHHHHHHHHHTC-----CEEEEEESEEESTTCC-SSHHHHHHHHHHTTC-CCEEEECEECEEEHHHHH
T ss_pred             -----CchHHHHHHHHHHHHhhhC-----CeEEEeeceEECcCCc-CcHHHHHHHHHHcCC-eeeCCCceEeeEEHHHHH
Confidence                 5799999999999987 54     8899999999999832 111       22333 3332 3344599999999


Q ss_pred             HHHHhhhcCcCCCCeEEeec-ccccHHHHHHHHHHHhCCC
Q 043792          248 DAHICVFEDVSSYGRYLCFN-HVINCNEDAMKLARMLLPP  286 (294)
Q Consensus       248 ~~i~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~  286 (294)
                      ++++.++.++. ++.|++.+ +.+++.|+++.+.+.+|.+
T Consensus       229 ~ai~~~~~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g~~  267 (333)
T 2q1w_A          229 RATVRAVDGVG-HGAYHFSSGTDVAIKELYDAVVEAMALP  267 (333)
T ss_dssp             HHHHHHHTTCC-CEEEECSCSCCEEHHHHHHHHHHHTTCS
T ss_pred             HHHHHHHhcCC-CCEEEeCCCCCccHHHHHHHHHHHhCCC
Confidence            99999998766 44587654 6799999999999999876

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=100.00  E-value=2.1e-34  Score=247.37  Aligned_cols=232  Identities=16%  Similarity=0.136  Sum_probs=182.8

Q ss_pred             eEEEeCCCchHHHHHHHHHHHC--CCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCCEEE
Q 043792           28 TVCVMDASGHFASALVRRLLLR--GYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCSGLF  103 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~Vi  103 (294)
                      +||||||+||||++|++.|+++  |++|++++|+....             .++.++.+|++|.+++.++++  ++|+||
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-------------~~~~~~~~D~~d~~~~~~~~~~~~~d~vi   67 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT-------------GGIKFITLDVSNRDEIDRAVEKYSIDAIF   67 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC-------------TTCCEEECCTTCHHHHHHHHHHTTCCEEE
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc-------------cCceEEEecCCCHHHHHHHHhhcCCcEEE
Confidence            5999999999999999999998  89999999875431             146788999999999999998  899999


Q ss_pred             ecCCCCCCC-CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccc
Q 043792          104 YSFEPPSDH-STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL  182 (294)
Q Consensus       104 h~a~~~~~~-~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  182 (294)
                      |+|+..... .......+++|+.++.++++++++. ++++|||+||.++  |+...  + ..+.+|+.+..+.      +
T Consensus        68 h~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~--~~~~~--~-~~~~~e~~~~~p~------~  135 (317)
T 3ajr_A           68 HLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQH-RVEKVVIPSTIGV--FGPET--P-KNKVPSITITRPR------T  135 (317)
T ss_dssp             ECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGG--CCTTS--C-SSSBCSSSCCCCC------S
T ss_pred             ECCcccCCccccChHHHhhhhhHHHHHHHHHHHHc-CCCEEEEecCHHH--hCCCC--C-CCCccccccCCCC------c
Confidence            999875421 1223478899999999999999998 8899999999863  44321  1 2356777766665      8


Q ss_pred             hhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCC---c---------cccccccccC--CCccccccHHHHHH
Q 043792          183 WHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISN---P---------YLKGAAEMYE--DGVMASVDLRFYVD  248 (294)
Q Consensus       183 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~---~---------~~~~~~~~~~--~~~~~~v~v~D~a~  248 (294)
                      .|+.+|.++|.+++.++.+++++++++||+++||+......   .         +..+....+.  +....|+|++|+|+
T Consensus       136 ~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  215 (317)
T 3ajr_A          136 MFGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALK  215 (317)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHH
Confidence            99999999999999998888999999999999997632211   0         1122223333  33445999999999


Q ss_pred             HHHhhhcCcCC----CCeEEeecccccHHHHHHHHHHHhC
Q 043792          249 AHICVFEDVSS----YGRYLCFNHVINCNEDAMKLARMLL  284 (294)
Q Consensus       249 ~i~~~~~~~~~----~~~~~~~~~~~s~~~~~~~~~~~~~  284 (294)
                      +++.+++++..    ++.|++.++.+++.|+++.+.+.++
T Consensus       216 a~~~~l~~~~~~~~~g~~~~i~~~~~s~~e~~~~i~~~~~  255 (317)
T 3ajr_A          216 ALVDLYEADRDKLVLRNGYNVTAYTFTPSELYSKIKERIP  255 (317)
T ss_dssp             HHHHHHHCCGGGCSSCSCEECCSEEECHHHHHHHHHTTCC
T ss_pred             HHHHHHhCCccccccCceEecCCccccHHHHHHHHHHHCC
Confidence            99999987543    2458887778999999999998876

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=100.00  E-value=5.7e-34  Score=246.82  Aligned_cols=247  Identities=15%  Similarity=0.074  Sum_probs=183.3

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC-hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCCEEE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK-LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCSGLF  103 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~Vi  103 (294)
                      |+||||||+||||+++++.|+++|++|++++|.... ...+.. +.. ....++.++.+|++|++.+.++++  ++|+||
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vi   78 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPV-IER-LGGKHPTFVEGDIRNEALMTEILHDHAIDTVI   78 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHH-HHH-HHTSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHH-HHh-hcCCcceEEEccCCCHHHHHHHhhccCCCEEE
Confidence            589999999999999999999999999999875332 111111 000 012468899999999999999887  489999


Q ss_pred             ecCCCCCCCC--cchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCCh-hhhhhc
Q 043792          104 YSFEPPSDHS--TYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDV-NLCKKF  180 (294)
Q Consensus       104 h~a~~~~~~~--~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~-~~~~~~  180 (294)
                      |+|+......  ......+++|+.++.++++++++. ++++||++||.+  +|+...    ..+++|+.+..+ .     
T Consensus        79 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~--~~g~~~----~~~~~e~~~~~~~~-----  146 (338)
T 1udb_A           79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFSSSAT--VYGDNP----KIPYVESFPTGTPQ-----  146 (338)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGG--GGCSCC----SSSBCTTSCCCCCS-----
T ss_pred             ECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEEccHH--HhCCCC----CCCcCcccCCCCCC-----
Confidence            9999754211  123367899999999999999988 889999999986  455433    447788776543 3     


Q ss_pred             cchhHhhHHHHHHHHHHHHHhc-CCeEEEEecCceeCCCCCC------C---Cc-------cc--cccc-cccC------
Q 043792          181 KLWHGLSKTLAEKTAWALAMDR-GISMVSINGGLVMGPDVTI------S---NP-------YL--KGAA-EMYE------  234 (294)
Q Consensus       181 ~~~Y~~sK~~~e~~~~~~~~~~-~~~~~ilrp~~i~G~~~~~------~---~~-------~~--~~~~-~~~~------  234 (294)
                       +.|+.+|.++|.+++.++.+. +++++++||+++||+....      .   ..       ..  .+.. .+++      
T Consensus       147 -~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  225 (338)
T 1udb_A          147 -SPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTE  225 (338)
T ss_dssp             -SHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSS
T ss_pred             -ChHHHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCC
Confidence             789999999999999998776 8999999999999985210      0   10       00  1111 1221      


Q ss_pred             C--CccccccHHHHHHHHHhhhcCc--CCC-CeEEee-cccccHHHHHHHHHHHhCCCCC
Q 043792          235 D--GVMASVDLRFYVDAHICVFEDV--SSY-GRYLCF-NHVINCNEDAMKLARMLLPPSD  288 (294)
Q Consensus       235 ~--~~~~~v~v~D~a~~i~~~~~~~--~~~-~~~~~~-~~~~s~~~~~~~~~~~~~~~~~  288 (294)
                      +  ....|||++|+|++++.+++..  ..+ +.|+++ ++++|+.|+++.+.+.+|.+.+
T Consensus       226 ~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~  285 (338)
T 1udb_A          226 DGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVN  285 (338)
T ss_dssp             SSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSCCC
T ss_pred             CCceeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCCCc
Confidence            2  2345999999999999988753  223 347765 5679999999999999987643

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=100.00  E-value=3.4e-34  Score=235.95  Aligned_cols=216  Identities=13%  Similarity=0.101  Sum_probs=169.8

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCe-EEEECCCCChhHHHHHhccCCE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKL-KVFQADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v-~~~~~Dl~~~~~~~~~~~~~d~  101 (294)
                      ..++|+||||||||+||+++++.|+++|++|++++|++++.+.+..        .++ +++.+|++  +.+.+++.++|+
T Consensus        18 ~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~--------~~~~~~~~~Dl~--~~~~~~~~~~D~   87 (236)
T 3e8x_A           18 YFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE--------RGASDIVVANLE--EDFSHAFASIDA   87 (236)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH--------TTCSEEEECCTT--SCCGGGGTTCSE
T ss_pred             CcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh--------CCCceEEEcccH--HHHHHHHcCCCE
Confidence            4567999999999999999999999999999999999877666554        278 99999998  778888899999


Q ss_pred             EEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhcc
Q 043792          102 LFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFK  181 (294)
Q Consensus       102 Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  181 (294)
                      |||+|+....  ...+..+++|+.++.++++++++. ++++||++||.++..             .+..+ .+.      
T Consensus        88 vi~~ag~~~~--~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~-------------~~~~~-~~~------  144 (236)
T 3e8x_A           88 VVFAAGSGPH--TGADKTILIDLWGAIKTIQEAEKR-GIKRFIMVSSVGTVD-------------PDQGP-MNM------  144 (236)
T ss_dssp             EEECCCCCTT--SCHHHHHHTTTHHHHHHHHHHHHH-TCCEEEEECCTTCSC-------------GGGSC-GGG------
T ss_pred             EEECCCCCCC--CCccccchhhHHHHHHHHHHHHHc-CCCEEEEEecCCCCC-------------CCCCh-hhh------
Confidence            9999997653  334588999999999999999998 889999999964211             11111 122      


Q ss_pred             chhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHHHHHHHHhhhcCcCCCC
Q 043792          182 LWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVSSYG  261 (294)
Q Consensus       182 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~i~~~~~~~~~~~  261 (294)
                      +.|+.+|.++|.+++    +.+++++++||+.+||+........     ....++...+++++|+|++++.++.++...+
T Consensus       145 ~~Y~~sK~~~e~~~~----~~gi~~~~lrpg~v~~~~~~~~~~~-----~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g  215 (236)
T 3e8x_A          145 RHYLVAKRLADDELK----RSSLDYTIVRPGPLSNEESTGKVTV-----SPHFSEITRSITRHDVAKVIAELVDQQHTIG  215 (236)
T ss_dssp             HHHHHHHHHHHHHHH----HSSSEEEEEEECSEECSCCCSEEEE-----ESSCSCCCCCEEHHHHHHHHHHHTTCGGGTT
T ss_pred             hhHHHHHHHHHHHHH----HCCCCEEEEeCCcccCCCCCCeEEe-----ccCCCcccCcEeHHHHHHHHHHHhcCccccC
Confidence            789999999999877    5799999999999999873211100     1112233569999999999999999876656


Q ss_pred             e-EEeecccccHHHHHHHHH
Q 043792          262 R-YLCFNHVINCNEDAMKLA  280 (294)
Q Consensus       262 ~-~~~~~~~~s~~~~~~~~~  280 (294)
                      + |++.++..++.|+++.++
T Consensus       216 ~~~~v~~~~~~~~e~~~~i~  235 (236)
T 3e8x_A          216 KTFEVLNGDTPIAKVVEQLG  235 (236)
T ss_dssp             EEEEEEECSEEHHHHHHTC-
T ss_pred             CeEEEeCCCcCHHHHHHHhc
Confidence            4 777777899999998765

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=100.00  E-value=4.6e-34  Score=251.41  Aligned_cols=244  Identities=18%  Similarity=0.034  Sum_probs=188.8

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC-----hhhHHHHHhhccCCC-CeEEEECCCCChhHHHHHhcc-
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK-----LQCIEEELINYNEEK-KLKVFQADPFDYHSLVNALKG-   98 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~l~~~~~~~~~~~-~v~~~~~Dl~~~~~~~~~~~~-   98 (294)
                      +|+||||||+||||++|++.|+++|++|++++|+...     .+.+...  ...... ++.++.+|++|.+.+.+++++ 
T Consensus        28 ~k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~  105 (381)
T 1n7h_A           28 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYID--PHNVNKALMKLHYADLTDASSLRRWIDVI  105 (381)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC----------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhc--cccccccceEEEECCCCCHHHHHHHHHhc
Confidence            3799999999999999999999999999999997654     1111110  000112 788999999999999999986 


Q ss_pred             -CCEEEecCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCCc-----EEEEecCcceeeeCCCCCCCCCCCCCCCC
Q 043792           99 -CSGLFYSFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTVD-----KVVFTSSLTAVVWNNHRDNPTSHDFDERN  170 (294)
Q Consensus        99 -~d~Vih~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-----~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~  170 (294)
                       +|+|||+|+.....  .......+++|+.++.+++++|.+. +++     +|||+||.+  +|+...    . +++|++
T Consensus       106 ~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~~~~~~v~~SS~~--vyg~~~----~-~~~E~~  177 (381)
T 1n7h_A          106 KPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH-TIDSGRTVKYYQAGSSE--MFGSTP----P-PQSETT  177 (381)
T ss_dssp             CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHH-HHHHCCCCEEEEEEEGG--GGTTSC----S-SBCTTS
T ss_pred             CCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCccCCccEEEEeCcHH--HhCCCC----C-CCCCCC
Confidence             69999999976532  1223478899999999999999987 665     999999986  566544    4 788888


Q ss_pred             CCChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc----------cccccc--cccCCC--
Q 043792          171 WSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP----------YLKGAA--EMYEDG--  236 (294)
Q Consensus       171 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~----------~~~~~~--~~~~~~--  236 (294)
                      +..+.      +.|+.+|.++|.+++.++.+++++++++|++++|||+......          +.++..  ..++++  
T Consensus       178 ~~~~~------~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~  251 (381)
T 1n7h_A          178 PFHPR------SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQA  251 (381)
T ss_dssp             CCCCC------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTC
T ss_pred             CCCCC------CchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCc
Confidence            77665      8899999999999999998889999999999999997532210          123432  123443  


Q ss_pred             ccccccHHHHHHHHHhhhcCcCCCCeEEee-cccccHHHHHHHHHHHhCCC
Q 043792          237 VMASVDLRFYVDAHICVFEDVSSYGRYLCF-NHVINCNEDAMKLARMLLPP  286 (294)
Q Consensus       237 ~~~~v~v~D~a~~i~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~  286 (294)
                      ...|+|++|+|++++.+++.+. ++.|++. ++.+++.|+++.+.+.+|.+
T Consensus       252 ~~~~v~v~Dva~a~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~  301 (381)
T 1n7h_A          252 SRDWGFAGDYVEAMWLMLQQEK-PDDYVVATEEGHTVEEFLDVSFGYLGLN  301 (381)
T ss_dssp             EEECEEHHHHHHHHHHHHTSSS-CCEEEECCSCEEEHHHHHHHHHHHTTCC
T ss_pred             eeeeEEHHHHHHHHHHHHhCCC-CCeEEeeCCCCCcHHHHHHHHHHHcCCC
Confidence            3459999999999999998765 3667665 45799999999999999865

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=100.00  E-value=7.3e-34  Score=246.52  Aligned_cols=242  Identities=12%  Similarity=-0.026  Sum_probs=189.0

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCC-------CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHh
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRG-------YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNAL   96 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~   96 (294)
                      .++|+||||||+||||++|++.|+++|       ++|++++|+......        ....++.++.+|++|.+.+.+++
T Consensus        12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~--------~~~~~~~~~~~Dl~d~~~~~~~~   83 (342)
T 2hrz_A           12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA--------GFSGAVDARAADLSAPGEAEKLV   83 (342)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT--------TCCSEEEEEECCTTSTTHHHHHH
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc--------ccCCceeEEEcCCCCHHHHHHHH
Confidence            456899999999999999999999999       899999997643211        11347889999999999999998


Q ss_pred             c-cCCEEEecCCCCCCC-CcchhhhHhHhhHHHHHHHHHHHhcCC-----CcEEEEecCcceeeeCCCCCCCCCCCCCCC
Q 043792           97 K-GCSGLFYSFEPPSDH-STYDELTAEVETMAAHNVLEACAQTNT-----VDKVVFTSSLTAVVWNNHRDNPTSHDFDER  169 (294)
Q Consensus        97 ~-~~d~Vih~a~~~~~~-~~~~~~~~~~n~~~~~~ll~~~~~~~~-----~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~  169 (294)
                      + ++|+|||+|+..... .......+++|+.++.++++++.+. +     +++||++||.+  +|+...    ..+++|+
T Consensus        84 ~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~-~~~~~~~~~iv~~SS~~--~~~~~~----~~~~~E~  156 (342)
T 2hrz_A           84 EARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIA-NGKDGYKPRVVFTSSIA--VFGAPL----PYPIPDE  156 (342)
T ss_dssp             HTCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH-HHHHCCCCEEEEEEEGG--GCCSSC----CSSBCTT
T ss_pred             hcCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhc-ccccCCCcEEEEeCchH--hhCCCC----CCCcCCC
Confidence            5 899999999975421 1123477899999999999999887 5     78999999986  455432    3378898


Q ss_pred             CCCChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeC-CCCCCCC--c--------cccccc-cccCC--
Q 043792          170 NWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMG-PDVTISN--P--------YLKGAA-EMYED--  235 (294)
Q Consensus       170 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G-~~~~~~~--~--------~~~~~~-~~~~~--  235 (294)
                      ++..+.      +.|+.+|.++|.+++.++.+.+++++++|++.+|| |+.....  .        ..++.. .+..+  
T Consensus       157 ~~~~~~------~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (342)
T 2hrz_A          157 FHTTPL------TSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPES  230 (342)
T ss_dssp             CCCCCS------SHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTT
T ss_pred             CCCCCc------chHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCc
Confidence            887666      88999999999999999888889999999999998 6642211  0        123433 12222  


Q ss_pred             CccccccHHHHHHHHHhhhcCcC----CCCeEEeecccccHHHHHHHHHHHhCCC
Q 043792          236 GVMASVDLRFYVDAHICVFEDVS----SYGRYLCFNHVINCNEDAMKLARMLLPP  286 (294)
Q Consensus       236 ~~~~~v~v~D~a~~i~~~~~~~~----~~~~~~~~~~~~s~~~~~~~~~~~~~~~  286 (294)
                      ....++|++|+|++++.+++.+.    .++.|+++++.+++.|+++.+.+.+|.+
T Consensus       231 ~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~g~~~s~~e~~~~i~~~~g~~  285 (342)
T 2hrz_A          231 IRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMPGLSATVGEQIEALRKVAGEK  285 (342)
T ss_dssp             CEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECCCEEEEHHHHHHHHHHHHCHH
T ss_pred             cceeeEehHHHHHHHHHHHhccccccCCccEEEcCCCCCCHHHHHHHHHHHcCcc
Confidence            23348999999999999997653    2345877777899999999999988754

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=100.00  E-value=7.2e-34  Score=243.81  Aligned_cols=228  Identities=13%  Similarity=0.104  Sum_probs=156.9

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc--CCEEE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG--CSGLF  103 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~Vi  103 (294)
                      +|+|||||||||||++|++.|+++|++|++++|+...     .         +  ++.+|++|.+.+.+++++  +|+||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----~---------~--~~~~Dl~d~~~~~~~~~~~~~d~vi   65 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----P---------K--FEQVNLLDSNAVHHIIHDFQPHVIV   65 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----------------------------------CHHHHHHHCCSEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----C---------C--eEEecCCCHHHHHHHHHhhCCCEEE
Confidence            5799999999999999999999999999999987532     1         2  678899999999998875  89999


Q ss_pred             ecCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhcc
Q 043792          104 YSFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFK  181 (294)
Q Consensus       104 h~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  181 (294)
                      |+|+.....  .......+++|+.++.++++++.+. ++ +|||+||.++  |+. .    ..+++|+++..+.      
T Consensus        66 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v--~~~-~----~~~~~E~~~~~~~------  130 (315)
T 2ydy_A           66 HCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAV-GA-FLIYISSDYV--FDG-T----NPPYREEDIPAPL------  130 (315)
T ss_dssp             ECC-------------------CHHHHHHHHHHHHH-TC-EEEEEEEGGG--SCS-S----SCSBCTTSCCCCC------
T ss_pred             ECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEchHHH--cCC-C----CCCCCCCCCCCCc------
Confidence            999875432  2233478999999999999999998 76 9999999863  443 2    3378888877665      


Q ss_pred             chhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc--------cc-cccc-cccCCCccccccHHHHHHHHH
Q 043792          182 LWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP--------YL-KGAA-EMYEDGVMASVDLRFYVDAHI  251 (294)
Q Consensus       182 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~--------~~-~~~~-~~~~~~~~~~v~v~D~a~~i~  251 (294)
                      +.|+.+|.++|.+++.+    +++++++||+.|||+.......        +. .+.. ...++....|+|++|+|++++
T Consensus       131 ~~Y~~sK~~~e~~~~~~----~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  206 (315)
T 2ydy_A          131 NLYGKTKLDGEKAVLEN----NLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCR  206 (315)
T ss_dssp             SHHHHHHHHHHHHHHHH----CTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHh----CCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHH
Confidence            88999999999999875    5778999999999998542111        11 3333 233444556999999999999


Q ss_pred             hhhcCc----CCCCeEEee-cccccHHHHHHHHHHHhCCCCC
Q 043792          252 CVFEDV----SSYGRYLCF-NHVINCNEDAMKLARMLLPPSD  288 (294)
Q Consensus       252 ~~~~~~----~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~  288 (294)
                      .++.++    ..++.|++. ++++++.|+++.+.+.+|.+..
T Consensus       207 ~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  248 (315)
T 2ydy_A          207 QLAEKRMLDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSS  248 (315)
T ss_dssp             HHHHHHHTCTTCCEEEECCCSCCBCHHHHHHHHHHHTTCCCT
T ss_pred             HHHHhhccccCCCCeEEEcCCCcccHHHHHHHHHHHhCCChh
Confidence            998754    334457665 4679999999999999987643

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=100.00  E-value=8.6e-34  Score=241.55  Aligned_cols=229  Identities=14%  Similarity=0.066  Sum_probs=170.9

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEecC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSF  106 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~a  106 (294)
                      |||||||||||||++|+++|+++||+|++++|++.+.              .+.       ..+...+.++++|+|||+|
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~--------------~~~-------~~~~~~~~l~~~d~vihla   59 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG--------------RIT-------WDELAASGLPSCDAAVNLA   59 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT--------------EEE-------HHHHHHHCCCSCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC--------------eee-------cchhhHhhccCCCEEEEec
Confidence            7899999999999999999999999999999986431              111       1123345567899999998


Q ss_pred             CCCCCC------CcchhhhHhHhhHHHHHHHHHHHhcCCC--cEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhh
Q 043792          107 EPPSDH------STYDELTAEVETMAAHNVLEACAQTNTV--DKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCK  178 (294)
Q Consensus       107 ~~~~~~------~~~~~~~~~~n~~~~~~ll~~~~~~~~~--~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~  178 (294)
                      +.....      .......++.|+.++.++++++... +.  ++||+.||.+  +|+...    ..+.+|+++..+.   
T Consensus        60 ~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~-~~~~~~~i~~Ss~~--vyg~~~----~~~~~E~~p~~~~---  129 (298)
T 4b4o_A           60 GENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKA-PQPPKAWVLVTGVA--YYQPSL----TAEYDEDSPGGDF---  129 (298)
T ss_dssp             CCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHC-SSCCSEEEEEEEGG--GSCCCS----SCCBCTTCCCSCS---
T ss_pred             cCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHh-CCCceEEEEEeeee--eecCCC----CCcccccCCcccc---
Confidence            753221      1122377889999999999999887 43  4577777775  666655    5588898887766   


Q ss_pred             hccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc----cccccccccCCCcc--ccccHHHHHHHHHh
Q 043792          179 KFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP----YLKGAAEMYEDGVM--ASVDLRFYVDAHIC  252 (294)
Q Consensus       179 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~----~~~~~~~~~~~~~~--~~v~v~D~a~~i~~  252 (294)
                         ..|+..|...|...  +....+++++++||+.||||+......    ...+....++++.+  +|||++|+|++++.
T Consensus       130 ---~~~~~~~~~~e~~~--~~~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~  204 (298)
T 4b4o_A          130 ---DFFSNLVTKWEAAA--RLPGDSTRQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTH  204 (298)
T ss_dssp             ---SHHHHHHHHHHHHH--CCSSSSSEEEEEEECEEECTTSHHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHH
T ss_pred             ---chhHHHHHHHHHHH--HhhccCCceeeeeeeeEEcCCCCchhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHH
Confidence               67887777776543  334568999999999999998321111    22334444455544  49999999999999


Q ss_pred             hhcCcCCCCeEEee-cccccHHHHHHHHHHHhCCCCCCCC
Q 043792          253 VFEDVSSYGRYLCF-NHVINCNEDAMKLARMLLPPSDTST  291 (294)
Q Consensus       253 ~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~  291 (294)
                      +++++...|.|+++ ++++|++|+++.+++.+|++..++.
T Consensus       205 ~~~~~~~~g~yn~~~~~~~t~~e~~~~ia~~lgrp~~~pv  244 (298)
T 4b4o_A          205 ALEANHVHGVLNGVAPSSATNAEFAQTFGAALGRRAFIPL  244 (298)
T ss_dssp             HHHCTTCCEEEEESCSCCCBHHHHHHHHHHHHTCCCCCCB
T ss_pred             HHhCCCCCCeEEEECCCccCHHHHHHHHHHHhCcCCcccC
Confidence            99988877888765 5679999999999999998765543

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=100.00  E-value=7.1e-34  Score=246.65  Aligned_cols=230  Identities=16%  Similarity=0.101  Sum_probs=181.0

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHC-CC-eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLR-GY-TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCS  100 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~-g~-~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d  100 (294)
                      ..++|+||||||||+||+++++.|+++ |+ +|++++|++.+...+...+    ...++.++.+|++|.+.+.++++++|
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~----~~~~v~~~~~Dl~d~~~l~~~~~~~D   93 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEF----NDPRMRFFIGDVRDLERLNYALEGVD   93 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHH----CCTTEEEEECCTTCHHHHHHHTTTCS
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHh----cCCCEEEEECCCCCHHHHHHHHhcCC
Confidence            345789999999999999999999999 97 9999999876555554421    13579999999999999999999999


Q ss_pred             EEEecCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhh
Q 043792          101 GLFYSFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCK  178 (294)
Q Consensus       101 ~Vih~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~  178 (294)
                      +|||+|+.....  ...+...+++|+.++.++++++.+. ++++||++||..++.   ..                    
T Consensus        94 ~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~-~v~~~V~~SS~~~~~---p~--------------------  149 (344)
T 2gn4_A           94 ICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKN-AISQVIALSTDKAAN---PI--------------------  149 (344)
T ss_dssp             EEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEECCGGGSS---CC--------------------
T ss_pred             EEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEecCCccCC---Cc--------------------
Confidence            999999976521  1123478999999999999999999 899999999975211   01                    


Q ss_pred             hccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc----ccccc-ccccCCC--ccccccHHHHHH
Q 043792          179 KFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP----YLKGA-AEMYEDG--VMASVDLRFYVD  248 (294)
Q Consensus       179 ~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~----~~~~~-~~~~~~~--~~~~v~v~D~a~  248 (294)
                         +.|+.+|.++|.+++.++.+   .+++++++||++|||+.......    +..|. +....++  ...|+|++|+|+
T Consensus       150 ---~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~  226 (344)
T 2gn4_A          150 ---NLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVS  226 (344)
T ss_dssp             ---SHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSHHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHH
T ss_pred             ---cHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCHHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHH
Confidence               68999999999999998754   57999999999999987321111    22344 3222233  334999999999


Q ss_pred             HHHhhhcCcCCCCeEEeecccccHHHHHHHHHHHh
Q 043792          249 AHICVFEDVSSYGRYLCFNHVINCNEDAMKLARML  283 (294)
Q Consensus       249 ~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~  283 (294)
                      +++.+++++..+..|++.++.+++.|+++.+.+.+
T Consensus       227 ~v~~~l~~~~~g~~~~~~~~~~s~~el~~~i~~~~  261 (344)
T 2gn4_A          227 FVLKSLKRMHGGEIFVPKIPSMKMTDLAKALAPNT  261 (344)
T ss_dssp             HHHHHHHHCCSSCEEEECCCEEEHHHHHHHHCTTC
T ss_pred             HHHHHHhhccCCCEEecCCCcEEHHHHHHHHHHhC
Confidence            99999987654445887777899999999998654

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=100.00  E-value=1.9e-33  Score=263.67  Aligned_cols=248  Identities=16%  Similarity=0.184  Sum_probs=189.3

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHC-CCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhH-HHHHhccCCE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLR-GYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHS-LVNALKGCSG  101 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~-~~~~~~~~d~  101 (294)
                      .++|+|||||||||||++|+++|+++ |++|++++|+......+.       ...+++++.+|++|.++ +.++++++|+
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~-------~~~~v~~v~~Dl~d~~~~~~~~~~~~D~  385 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIHSEWIEYHVKKCDV  385 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT-------TCTTEEEEECCTTTCHHHHHHHHHHCSE
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc-------cCCceEEEECCCCCcHHHHHHhhcCCCE
Confidence            45789999999999999999999998 899999999876543321       13478999999999765 7778889999


Q ss_pred             EEecCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhh-hh
Q 043792          102 LFYSFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNL-CK  178 (294)
Q Consensus       102 Vih~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~  178 (294)
                      |||+|+.....  .......+++|+.++.+++++|.+. + ++|||+||.+  +|+...    ..+++|+++..... ..
T Consensus       386 Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~-~r~V~~SS~~--vyg~~~----~~~~~E~~~~~~~~p~~  457 (660)
T 1z7e_A          386 VLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPSTSE--VYGMCS----DKYFDEDHSNLIVGPVN  457 (660)
T ss_dssp             EEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECCGG--GGBTCC----SSSBCTTTCCEEECCTT
T ss_pred             EEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHh-C-CEEEEEecHH--HcCCCC----CcccCCCccccccCccc
Confidence            99999976532  1223478899999999999999998 7 8999999986  454433    34678877532110 01


Q ss_pred             hccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCC--------CCc-------cccccc-cccCC--Ccccc
Q 043792          179 KFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTI--------SNP-------YLKGAA-EMYED--GVMAS  240 (294)
Q Consensus       179 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~--------~~~-------~~~~~~-~~~~~--~~~~~  240 (294)
                      .+.+.|+.+|.++|.+++.++.+.+++++++||+++||+....        ...       +.++.+ ..+++  ....|
T Consensus       458 ~p~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~  537 (660)
T 1z7e_A          458 KPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCF  537 (660)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEEC
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEE
Confidence            1226899999999999999988889999999999999998532        110       233443 33333  34459


Q ss_pred             ccHHHHHHHHHhhhcCcC--CCC-eEEeecc--cccHHHHHHHHHHHhCCC
Q 043792          241 VDLRFYVDAHICVFEDVS--SYG-RYLCFNH--VINCNEDAMKLARMLLPP  286 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~~--~~~-~~~~~~~--~~s~~~~~~~~~~~~~~~  286 (294)
                      +|++|+|++++.+++++.  ..+ .|++.++  .+++.|+++.+.+.+|.+
T Consensus       538 i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~  588 (660)
T 1z7e_A          538 TDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKH  588 (660)
T ss_dssp             EEHHHHHHHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHC
T ss_pred             EEHHHHHHHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCC
Confidence            999999999999998764  344 4777654  699999999999988754

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=100.00  E-value=3.3e-34  Score=244.09  Aligned_cols=222  Identities=12%  Similarity=0.033  Sum_probs=177.7

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc--CCEEEe
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG--CSGLFY  104 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~Vih  104 (294)
                      |+|||||||||||++|++.|+ +|++|++++|+..                   ++.+|+.|.+.+.+++++  +|+|||
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-------------------~~~~D~~d~~~~~~~~~~~~~d~vih   60 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-------------------EFCGDFSNPKGVAETVRKLRPDVIVN   60 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-------------------SSCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-------------------cccccCCCHHHHHHHHHhcCCCEEEE
Confidence            589999999999999999999 8999999998752                   235799999999999986  999999


Q ss_pred             cCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccc
Q 043792          105 SFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL  182 (294)
Q Consensus       105 ~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  182 (294)
                      +|+.....  .......+++|+.++.+++++|++. ++ ||||+||.+  +|+...    ..+++|+++..+.      +
T Consensus        61 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~--vy~~~~----~~~~~E~~~~~p~------~  126 (299)
T 1n2s_A           61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANET-GA-WVVHYSTDY--VFPGTG----DIPWQETDATSPL------N  126 (299)
T ss_dssp             CCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT-TC-EEEEEEEGG--GSCCCT----TCCBCTTSCCCCS------S
T ss_pred             CcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEeccc--EEeCCC----CCCCCCCCCCCCc------c
Confidence            99975521  2334578999999999999999988 76 899999986  455443    4478888877766      8


Q ss_pred             hhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-----cccccc-cccCCCccccccHHHHHHHHHhhhcC
Q 043792          183 WHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-----YLKGAA-EMYEDGVMASVDLRFYVDAHICVFED  256 (294)
Q Consensus       183 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-----~~~~~~-~~~~~~~~~~v~v~D~a~~i~~~~~~  256 (294)
                      .|+.+|.++|.+++.+.    .+++++||+++||+.......     +.++.+ ...++....|+|++|+|++++.++++
T Consensus       127 ~Y~~sK~~~E~~~~~~~----~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  202 (299)
T 1n2s_A          127 VYGKTKLAGEKALQDNC----PKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRV  202 (299)
T ss_dssp             HHHHHHHHHHHHHHHHC----SSEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhC----CCeEEEeeeeecCCCcCcHHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHHH
Confidence            99999999999998864    489999999999997431111     223443 34566556699999999999999987


Q ss_pred             c--CC--CCeEEeec-ccccHHHHHHHHHHHhCCC
Q 043792          257 V--SS--YGRYLCFN-HVINCNEDAMKLARMLLPP  286 (294)
Q Consensus       257 ~--~~--~~~~~~~~-~~~s~~~~~~~~~~~~~~~  286 (294)
                      +  ..  ++.|++.+ +.+|+.|+++.+.+.+|.+
T Consensus       203 ~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~  237 (299)
T 1n2s_A          203 ALNKPEVAGLYHLVAGGTTTWHDYAALVFDEARKA  237 (299)
T ss_dssp             HHHCGGGCEEEECCCBSCEEHHHHHHHHHHHHHHH
T ss_pred             hccccccCceEEEeCCCCCCHHHHHHHHHHHhCCC
Confidence            6  22  45687655 6799999999999988754

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=100.00  E-value=8.4e-34  Score=240.85  Aligned_cols=221  Identities=12%  Similarity=0.097  Sum_probs=176.2

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCCEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCSGL  102 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~V  102 (294)
                      ..++|||||||||||++|++.|+++|++|++++|+.                       +|++|.+.+.++++  ++|+|
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-----------------------~Dl~d~~~~~~~~~~~~~d~v   67 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD-----------------------LDITNVLAVNKFFNEKKPNVV   67 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-----------------------CCTTCHHHHHHHHHHHCCSEE
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc-----------------------CCCCCHHHHHHHHHhcCCCEE
Confidence            358999999999999999999999999999998862                       49999999999998  79999


Q ss_pred             EecCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhc
Q 043792          103 FYSFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKF  180 (294)
Q Consensus       103 ih~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~  180 (294)
                      ||+|+.....  .......+++|+.++.++++++.+. ++ +|||+||.+  +|+...    ..+++|+++..+.     
T Consensus        68 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~-~iv~~SS~~--v~~~~~----~~~~~E~~~~~~~-----  134 (292)
T 1vl0_A           68 INCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV-GA-EIVQISTDY--VFDGEA----KEPITEFDEVNPQ-----  134 (292)
T ss_dssp             EECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGG--GSCSCC----SSCBCTTSCCCCC-----
T ss_pred             EECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEechHH--eECCCC----CCCCCCCCCCCCc-----
Confidence            9999975421  1223478999999999999999998 77 999999986  454433    3478898877666     


Q ss_pred             cchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc----cccccc-cccCCCccccccHHHHHHHHHhhhc
Q 043792          181 KLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP----YLKGAA-EMYEDGVMASVDLRFYVDAHICVFE  255 (294)
Q Consensus       181 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~----~~~~~~-~~~~~~~~~~v~v~D~a~~i~~~~~  255 (294)
                       +.|+.+|.++|.+++.+.    .+++++||+++||+.......    +..+.. ...++....|+|++|+|++++.+++
T Consensus       135 -~~Y~~sK~~~E~~~~~~~----~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  209 (292)
T 1vl0_A          135 -SAYGKTKLEGENFVKALN----PKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVID  209 (292)
T ss_dssp             -SHHHHHHHHHHHHHHHHC----SSEEEEEECSEESSSSCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHH
T ss_pred             -cHHHHHHHHHHHHHHhhC----CCeEEEeeeeeeCCCcChHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHHHHHh
Confidence             889999999999998863    478999999999993110000    122333 3445555669999999999999998


Q ss_pred             CcCCCCeEEeec-ccccHHHHHHHHHHHhCCCC
Q 043792          256 DVSSYGRYLCFN-HVINCNEDAMKLARMLLPPS  287 (294)
Q Consensus       256 ~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~  287 (294)
                      ++ .++.|++.+ +.+++.|+++.+.+.+|.+.
T Consensus       210 ~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  241 (292)
T 1vl0_A          210 EK-NYGTFHCTCKGICSWYDFAVEIFRLTGIDV  241 (292)
T ss_dssp             HT-CCEEEECCCBSCEEHHHHHHHHHHHHCCCC
T ss_pred             cC-CCcEEEecCCCCccHHHHHHHHHHHhCCCC
Confidence            76 445687654 67999999999999998764

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=100.00  E-value=7.5e-33  Score=232.10  Aligned_cols=213  Identities=15%  Similarity=0.066  Sum_probs=173.3

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      +||+||||||+|+||+++++.|+++|++|++++|+..+..           ..++.++.+|++|.+++.++++++|+|||
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   70 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-----------GPNEECVQCDLADANAVNAMVAGCDGIVH   70 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-----------CTTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-----------CCCCEEEEcCCCCHHHHHHHHcCCCEEEE
Confidence            3578999999999999999999999999999999875422           34799999999999999999999999999


Q ss_pred             cCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchh
Q 043792          105 SFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWH  184 (294)
Q Consensus       105 ~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y  184 (294)
                      ||+....  ...+..+++|+.++.++++++++. ++++||++||.+++.+.. .    ..+++|+.+..+.      +.|
T Consensus        71 ~Ag~~~~--~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~SS~~~~g~~~-~----~~~~~e~~~~~~~------~~Y  136 (267)
T 3rft_A           71 LGGISVE--KPFEQILQGNIIGLYNLYEAARAH-GQPRIVFASSNHTIGYYP-Q----TERLGPDVPARPD------GLY  136 (267)
T ss_dssp             CCSCCSC--CCHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGGTTSB-T----TSCBCTTSCCCCC------SHH
T ss_pred             CCCCcCc--CCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcchHHhCCCC-C----CCCCCCCCCCCCC------ChH
Confidence            9998432  234588999999999999999988 889999999987443221 2    3378888877766      889


Q ss_pred             HhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHHHHHHHHhhhcCcCCCC-e-
Q 043792          185 GLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVSSYG-R-  262 (294)
Q Consensus       185 ~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~i~~~~~~~~~~~-~-  262 (294)
                      +.+|.++|.+++.++.+++++++++||+.+||+...             ++....|++++|+++++..+++.+..++ . 
T Consensus       137 ~~sK~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~~~-------------~~~~~~~~~~~d~a~~~~~~~~~~~~~~~~~  203 (267)
T 3rft_A          137 GVSKCFGENLARMYFDKFGQETALVRIGSCTPEPNN-------------YRMLSTWFSHDDFVSLIEAVFRAPVLGCPVV  203 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCEEEEEECBCSSSCCS-------------TTHHHHBCCHHHHHHHHHHHHHCSCCCSCEE
T ss_pred             HHHHHHHHHHHHHHHHHhCCeEEEEEeecccCCCCC-------------CCceeeEEcHHHHHHHHHHHHhCCCCCceEE
Confidence            999999999999999899999999999999987411             1122348999999999999998876654 3 


Q ss_pred             EEeecccccHHHH
Q 043792          263 YLCFNHVINCNED  275 (294)
Q Consensus       263 ~~~~~~~~s~~~~  275 (294)
                      |++++++.++.++
T Consensus       204 ~~~s~~~~~~~~~  216 (267)
T 3rft_A          204 WGASANDAGWWDN  216 (267)
T ss_dssp             EECCCCTTCCBCC
T ss_pred             EEeCCCCCCcccC
Confidence            4555555444443

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=100.00  E-value=4.7e-33  Score=248.54  Aligned_cols=252  Identities=10%  Similarity=0.017  Sum_probs=181.7

Q ss_pred             CCCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCCh---hhHHHHHhh-------ccCCCCeEEEECCCCChhH
Q 043792           22 SSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKL---QCIEEELIN-------YNEEKKLKVFQADPFDYHS   91 (294)
Q Consensus        22 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~l~~~~~~-------~~~~~~v~~~~~Dl~~~~~   91 (294)
                      ....+|+|||||||||||++|++.|+++|++|++++|+....   ..+.+.+..       .....++.++.+|++|.+.
T Consensus        65 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~  144 (427)
T 4f6c_A           65 SHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD  144 (427)
T ss_dssp             CCCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CC
T ss_pred             CCCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCccc
Confidence            345678999999999999999999999999999999998732   222221100       0113589999999999887


Q ss_pred             HHHHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCC
Q 043792           92 LVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNW  171 (294)
Q Consensus        92 ~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~  171 (294)
                      +. .+.++|+|||||+..... ......+++|+.++.+++++|.+  ++++|||+||.++ +..... .+...+++|+++
T Consensus       145 l~-~~~~~d~Vih~A~~~~~~-~~~~~~~~~Nv~g~~~l~~aa~~--~~~~~v~~SS~~~-G~~~~~-~~~~~~~~E~~~  218 (427)
T 4f6c_A          145 VV-LPENMDTIIHAGARTDHF-GDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTISV-GTYFDI-DTEDVTFSEADV  218 (427)
T ss_dssp             CC-CSSCCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHH--TTCEEEEEEEGGG-GSEECS-SCSCCEECTTCS
T ss_pred             CC-CcCCCCEEEECCcccCCC-CCHHHHHHHHHHHHHHHHHHHHh--cCCcEEEECchHh-CCCccC-CCCCcccccccc
Confidence            77 777899999999986533 23347899999999999999988  4589999999875 211111 122457888887


Q ss_pred             CChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCC----------c----cccccc-cc-cCC
Q 043792          172 SDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISN----------P----YLKGAA-EM-YED  235 (294)
Q Consensus       172 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~----------~----~~~~~~-~~-~~~  235 (294)
                      ..+..   +.+.|+.+|+++|.+++.++. .|++++++||++|||+......          .    ..++.. +. .++
T Consensus       219 ~~~~~---~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (427)
T 4f6c_A          219 YKGQL---LTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAE  294 (427)
T ss_dssp             CSSCC---CCSHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHT
T ss_pred             ccCCC---CCCchHHHHHHHHHHHHHHHH-cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCcccc
Confidence            43221   228899999999999999764 6999999999999999864421          0    111121 11 135


Q ss_pred             CccccccHHHHHHHHHhhhcCcCCCCeEEee-cccccHHHHHHHHHHHhC
Q 043792          236 GVMASVDLRFYVDAHICVFEDVSSYGRYLCF-NHVINCNEDAMKLARMLL  284 (294)
Q Consensus       236 ~~~~~v~v~D~a~~i~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~  284 (294)
                      ....|++++|+|++++.++..+..++.|++. ++++++.|+++.+.+ ++
T Consensus       295 ~~~~~v~v~DvA~ai~~~~~~~~~g~~~~l~~~~~~s~~el~~~i~~-~g  343 (427)
T 4f6c_A          295 MPVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKR-KE  343 (427)
T ss_dssp             CEECCEEHHHHHHHHHHHTTSCCCCSEEEESCSCCEEHHHHHHHHHS-SC
T ss_pred             ceEEEeeHHHHHHHHHHHHcCCCCCCEEEecCCCCCcHHHHHHHHHH-cC
Confidence            5666999999999999999887744568665 567999999999987 54

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=100.00  E-value=1.9e-33  Score=228.96  Aligned_cols=211  Identities=13%  Similarity=0.149  Sum_probs=146.2

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEecC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSF  106 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~a  106 (294)
                      |||||||||||||+++++.|+++|++|++++|++++...+      .   .+++++.+|++|.+.  +.+.++|+|||++
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~---~~~~~~~~D~~d~~~--~~~~~~d~vi~~a   69 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT------H---KDINILQKDIFDLTL--SDLSDQNVVVDAY   69 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHH------C---SSSEEEECCGGGCCH--HHHTTCSEEEECC
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhc------c---CCCeEEeccccChhh--hhhcCCCEEEECC
Confidence            6899999999999999999999999999999987543322      1   479999999999887  7889999999999


Q ss_pred             CCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHh
Q 043792          107 EPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGL  186 (294)
Q Consensus       107 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~  186 (294)
                      +...       ...+.|+.++.++++++++. +++++|++||.++ .++...    ..+..|+.+..+.      +.|+.
T Consensus        70 g~~~-------~~~~~~~~~~~~l~~a~~~~-~~~~~v~~SS~~~-~~~~~~----~~~~~~~~~~~~~------~~y~~  130 (221)
T 3ew7_A           70 GISP-------DEAEKHVTSLDHLISVLNGT-VSPRLLVVGGAAS-LQIDED----GNTLLESKGLREA------PYYPT  130 (221)
T ss_dssp             CSST-------TTTTSHHHHHHHHHHHHCSC-CSSEEEEECCCC------------------------C------CCSCC
T ss_pred             cCCc-------cccchHHHHHHHHHHHHHhc-CCceEEEEecceE-EEcCCC----CccccccCCCCCH------HHHHH
Confidence            9854       23567999999999999998 8899999999864 334333    2245555554444      77999


Q ss_pred             hHHHHHHHHHHHHH-hcCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHHHHHHHHhhhcCcCCCCe-EE
Q 043792          187 SKTLAEKTAWALAM-DRGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVSSYGR-YL  264 (294)
Q Consensus       187 sK~~~e~~~~~~~~-~~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~i~~~~~~~~~~~~-~~  264 (294)
                      +|..+|.+ ..+.. +.+++++++||+.+||+..........+...........+++++|+|++++.+++++...++ |+
T Consensus       131 ~k~~~e~~-~~~~~~~~gi~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~  209 (221)
T 3ew7_A          131 ARAQAKQL-EHLKSHQAEFSWTYISPSAMFEPGERTGDYQIGKDHLLFGSDGNSFISMEDYAIAVLDEIERPNHLNEHFT  209 (221)
T ss_dssp             HHHHHHHH-HHHHTTTTTSCEEEEECSSCCCCC---------------------CCCHHHHHHHHHHHHHSCSCTTSEEE
T ss_pred             HHHHHHHH-HHHHhhccCccEEEEeCcceecCCCccCceEeccccceecCCCCceEeHHHHHHHHHHHHhCccccCCEEE
Confidence            99999986 33343 67999999999999998532222111222212222223599999999999999998877664 77


Q ss_pred             eecc
Q 043792          265 CFNH  268 (294)
Q Consensus       265 ~~~~  268 (294)
                      +.+.
T Consensus       210 ~~~~  213 (221)
T 3ew7_A          210 VAGK  213 (221)
T ss_dssp             CCC-
T ss_pred             ECCC
Confidence            6654

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=100.00  E-value=4.9e-33  Score=227.11  Aligned_cols=212  Identities=13%  Similarity=0.104  Sum_probs=159.3

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEecC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSF  106 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~a  106 (294)
                      |||||||||||||+++++.|+++|++|++++|++++...+.        ..+++++.+|++|.+.  +.+.++|+|||+|
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------~~~~~~~~~D~~d~~~--~~~~~~d~vi~~a   70 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL--------GATVATLVKEPLVLTE--ADLDSVDAVVDAL   70 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT--------CTTSEEEECCGGGCCH--HHHTTCSEEEECC
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc--------CCCceEEecccccccH--hhcccCCEEEECC
Confidence            57999999999999999999999999999999865443221        2479999999999887  7888999999999


Q ss_pred             CCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHh
Q 043792          107 EPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGL  186 (294)
Q Consensus       107 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~  186 (294)
                      +....     ....+.|+.++.++++++++. + ++||++||.+++......   ...+.+|.....+.      +.|+.
T Consensus        71 g~~~~-----~~~~~~n~~~~~~l~~a~~~~-~-~~~v~~SS~~~~~~~~~~---~~~~~~~~~~~~~~------~~y~~  134 (224)
T 3h2s_A           71 SVPWG-----SGRGYLHLDFATHLVSLLRNS-D-TLAVFILGSASLAMPGAD---HPMILDFPESAASQ------PWYDG  134 (224)
T ss_dssp             CCCTT-----SSCTHHHHHHHHHHHHTCTTC-C-CEEEEECCGGGSBCTTCS---SCGGGGCCGGGGGS------TTHHH
T ss_pred             ccCCC-----cchhhHHHHHHHHHHHHHHHc-C-CcEEEEecceeeccCCCC---ccccccCCCCCccc------hhhHH
Confidence            98621     123578999999999999999 7 899999998644332221   01234444333323      78999


Q ss_pred             hHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCccccccc-cccCCCccccccHHHHHHHHHhhhcCcCCCCe-EE
Q 043792          187 SKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAA-EMYEDGVMASVDLRFYVDAHICVFEDVSSYGR-YL  264 (294)
Q Consensus       187 sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~~~~~~~-~~~~~~~~~~v~v~D~a~~i~~~~~~~~~~~~-~~  264 (294)
                      +|..+|. +..+..+.+++++++||+.+||+.....  +..+.. ....+....+++++|+|++++.+++++...++ |.
T Consensus       135 sK~~~e~-~~~~~~~~~i~~~ivrp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~  211 (224)
T 3h2s_A          135 ALYQYYE-YQFLQMNANVNWIGISPSEAFPSGPATS--YVAGKDTLLVGEDGQSHITTGNMALAILDQLEHPTAIRDRIV  211 (224)
T ss_dssp             HHHHHHH-HHHHTTCTTSCEEEEEECSBCCCCCCCC--EEEESSBCCCCTTSCCBCCHHHHHHHHHHHHHSCCCTTSEEE
T ss_pred             HHHHHHH-HHHHHhcCCCcEEEEcCccccCCCcccC--ceecccccccCCCCCceEeHHHHHHHHHHHhcCccccCCEEE
Confidence            9999994 4556566799999999999999954322  222222 22233445599999999999999998877564 76


Q ss_pred             eec
Q 043792          265 CFN  267 (294)
Q Consensus       265 ~~~  267 (294)
                      +.+
T Consensus       212 ~~~  214 (224)
T 3h2s_A          212 VRD  214 (224)
T ss_dssp             EEE
T ss_pred             Eec
Confidence            655

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=100.00  E-value=7.8e-33  Score=234.26  Aligned_cols=216  Identities=18%  Similarity=0.150  Sum_probs=172.0

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHC--CCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           27 KTVCVMDASGHFASALVRRLLLR--GYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      |+|||||||||||+++++.|+++  |++|++++|++++...+..        .+++++.+|++|++++.++++++|+|||
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~--------~~~~~~~~D~~d~~~l~~~~~~~d~vi~   72 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD--------QGVEVRHGDYNQPESLQKAFAGVSKLLF   72 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH--------TTCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh--------cCCeEEEeccCCHHHHHHHHhcCCEEEE
Confidence            57999999999999999999999  9999999998776555443        3789999999999999999999999999


Q ss_pred             cCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchh
Q 043792          105 SFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWH  184 (294)
Q Consensus       105 ~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y  184 (294)
                      +++....      .  ++|+.++.+++++|++. ++++|||+||.++  +. ..                       .+|
T Consensus        73 ~a~~~~~------~--~~n~~~~~~l~~a~~~~-~~~~~v~~Ss~~~--~~-~~-----------------------~~y  117 (287)
T 2jl1_A           73 ISGPHYD------N--TLLIVQHANVVKAARDA-GVKHIAYTGYAFA--EE-SI-----------------------IPL  117 (287)
T ss_dssp             CCCCCSC------H--HHHHHHHHHHHHHHHHT-TCSEEEEEEETTG--GG-CC-----------------------STH
T ss_pred             cCCCCcC------c--hHHHHHHHHHHHHHHHc-CCCEEEEECCCCC--CC-CC-----------------------Cch
Confidence            9986321      1  57999999999999998 8999999999753  21 11                       469


Q ss_pred             HhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCC-Cccc-ccccc-ccCCCccccccHHHHHHHHHhhhcCcCCCC
Q 043792          185 GLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTIS-NPYL-KGAAE-MYEDGVMASVDLRFYVDAHICVFEDVSSYG  261 (294)
Q Consensus       185 ~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~-~~~~-~~~~~-~~~~~~~~~v~v~D~a~~i~~~~~~~~~~~  261 (294)
                      +.+|..+|.+++.    .+++++++||+.++|+..... .... .+... ..++....|+|++|+|++++.++.++...+
T Consensus       118 ~~~K~~~E~~~~~----~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g  193 (287)
T 2jl1_A          118 AHVHLATEYAIRT----TNIPYTFLRNALYTDFFVNEGLRASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEEGHEN  193 (287)
T ss_dssp             HHHHHHHHHHHHH----TTCCEEEEEECCBHHHHSSGGGHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSSSCTT
T ss_pred             HHHHHHHHHHHHH----cCCCeEEEECCEeccccchhhHHHHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCCCCCC
Confidence            9999999998864    689999999999888652110 0011 22221 224555669999999999999998765555


Q ss_pred             -eEEeec-ccccHHHHHHHHHHHhCCCCCC
Q 043792          262 -RYLCFN-HVINCNEDAMKLARMLLPPSDT  289 (294)
Q Consensus       262 -~~~~~~-~~~s~~~~~~~~~~~~~~~~~~  289 (294)
                       .|++.+ +.+|+.|+++.+.+.+|.+.++
T Consensus       194 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~  223 (287)
T 2jl1_A          194 KTYNLVSNQPWTFDELAQILSEVSGKKVVH  223 (287)
T ss_dssp             EEEEECCSSCBCHHHHHHHHHHHHSSCCEE
T ss_pred             cEEEecCCCcCCHHHHHHHHHHHHCCcceE
Confidence             577765 4799999999999999987543

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=100.00  E-value=8.5e-32  Score=235.35  Aligned_cols=238  Identities=13%  Similarity=0.104  Sum_probs=184.5

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCC-----CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc--
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRG-----YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG--   98 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--   98 (294)
                      +|+|||||||||||++|++.|+++|     ++|++++|+.....         ....+++++.+|++|.+++.+++++  
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~---------~~~~~~~~~~~Dl~d~~~~~~~~~~~~   71 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW---------HEDNPINYVQCDISDPDDSQAKLSPLT   71 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC---------CCSSCCEEEECCTTSHHHHHHHHTTCT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc---------cccCceEEEEeecCCHHHHHHHHhcCC
Confidence            3789999999999999999999999     99999999865432         0124789999999999999999988  


Q ss_pred             -CCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhc-CCCcEEE-------EecCcceeeeCCCCCCCCCCCCCCC
Q 043792           99 -CSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQT-NTVDKVV-------FTSSLTAVVWNNHRDNPTSHDFDER  169 (294)
Q Consensus        99 -~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v-------~~Ss~~~~~~~~~~~~~~~~~~~e~  169 (294)
                       +|+|||+|+...   ......+++|+.++.+++++|++. .++++||       |+||.+  +|+...  +...+++|+
T Consensus        72 ~~d~vih~a~~~~---~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~--vyg~~~--~~~~~~~E~  144 (364)
T 2v6g_A           72 DVTHVFYVTWANR---STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFE--SYGKIE--SHDPPYTED  144 (364)
T ss_dssp             TCCEEEECCCCCC---SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGG--GTTTSC--CCCSSBCTT
T ss_pred             CCCEEEECCCCCc---chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechh--hccccc--cCCCCCCcc
Confidence             999999999764   234578999999999999999886 3688998       788885  455421  113478888


Q ss_pred             CCCChhhhhhccchhHhhHHHHHHHHHHHHHhcC-CeEEEEecCceeCCCCCCCCc---------cc---cccc-cccCC
Q 043792          170 NWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRG-ISMVSINGGLVMGPDVTISNP---------YL---KGAA-EMYED  235 (294)
Q Consensus       170 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~-~~~~ilrp~~i~G~~~~~~~~---------~~---~~~~-~~~~~  235 (294)
                      ++..+..     +.|    +.+|++++.++.+++ ++++++||++||||.......         .+   .|.+ .++++
T Consensus       145 ~~~~~~~-----~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~  215 (364)
T 2v6g_A          145 LPRLKYM-----NFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGC  215 (364)
T ss_dssp             SCCCSSC-----CHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSC
T ss_pred             ccCCccc-----hhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCC
Confidence            7765421     567    458999998887777 999999999999998643211         11   3444 33444


Q ss_pred             C-----ccccccHHHHHHHHHhhhcCcCCCC-eEEeec-ccccHHHHHHHHHHHhCCCCC
Q 043792          236 G-----VMASVDLRFYVDAHICVFEDVSSYG-RYLCFN-HVINCNEDAMKLARMLLPPSD  288 (294)
Q Consensus       236 ~-----~~~~v~v~D~a~~i~~~~~~~~~~~-~~~~~~-~~~s~~~~~~~~~~~~~~~~~  288 (294)
                      +     ...++|++|+|++++.+++++...+ .|++.+ +.+|+.|+++.+++.+|.+..
T Consensus       216 ~~~~~~~~~~~~v~Dva~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~  275 (364)
T 2v6g_A          216 KAAWDGYSDCSDADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECG  275 (364)
T ss_dssp             HHHHHSCBCCEEHHHHHHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBC
T ss_pred             cccccccCCCCcHHHHHHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCC
Confidence            3     2348899999999999998775445 587765 469999999999999997644

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=100.00  E-value=5.5e-32  Score=255.49  Aligned_cols=257  Identities=16%  Similarity=0.073  Sum_probs=188.0

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCS  100 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d  100 (294)
                      ..++|+||||||+||||++|++.|+++|++|++++|+..........+.. ....++.++.+|++|.+.+.++++  ++|
T Consensus         8 ~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D   86 (699)
T 1z45_A            8 ESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEV-LTKHHIPFYEVDLCDRKGLEKVFKEYKID   86 (699)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHH-HHTSCCCEEECCTTCHHHHHHHHHHSCCC
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhh-ccCCceEEEEcCCCCHHHHHHHHHhCCCC
Confidence            44578999999999999999999999999999999976542211110000 013478899999999999999998  799


Q ss_pred             EEEecCCCCCCCC--cchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhh
Q 043792          101 GLFYSFEPPSDHS--TYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCK  178 (294)
Q Consensus       101 ~Vih~a~~~~~~~--~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~  178 (294)
                      +|||+|+......  ......+++|+.++.+++++|++. ++++||++||.+  +|+.....+...+++|+.+..+.   
T Consensus        87 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~~iV~~SS~~--vyg~~~~~~~~~~~~E~~~~~p~---  160 (699)
T 1z45_A           87 SVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVFSSSAT--VYGDATRFPNMIPIPEECPLGPT---  160 (699)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGG--GGCCGGGSTTCCSBCTTSCCCCC---
T ss_pred             EEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECcHH--HhCCCccccccCCccccCCCCCC---
Confidence            9999999754221  123367899999999999999998 889999999986  34432100112367787766655   


Q ss_pred             hccchhHhhHHHHHHHHHHHHHh--cCCeEEEEecCceeCCCCCC---------CCc-------cccc--cc-cccC---
Q 043792          179 KFKLWHGLSKTLAEKTAWALAMD--RGISMVSINGGLVMGPDVTI---------SNP-------YLKG--AA-EMYE---  234 (294)
Q Consensus       179 ~~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~ilrp~~i~G~~~~~---------~~~-------~~~~--~~-~~~~---  234 (294)
                         +.|+.+|.++|.+++.++.+  .+++++++||+++||+....         ...       ...+  .+ .+++   
T Consensus       161 ---~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  237 (699)
T 1z45_A          161 ---NPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDY  237 (699)
T ss_dssp             ---SHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC----
T ss_pred             ---ChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcc
Confidence               88999999999999998876  68999999999999986321         011       1112  12 2333   


Q ss_pred             ---CC--ccccccHHHHHHHHHhhhcCc------CC-CCeEEee-cccccHHHHHHHHHHHhCCCCCC
Q 043792          235 ---DG--VMASVDLRFYVDAHICVFEDV------SS-YGRYLCF-NHVINCNEDAMKLARMLLPPSDT  289 (294)
Q Consensus       235 ---~~--~~~~v~v~D~a~~i~~~~~~~------~~-~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~  289 (294)
                         ++  ...|||++|+|++++.+++..      .. ++.|++. ++.+++.|+++.+++.+|.+.++
T Consensus       238 ~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~  305 (699)
T 1z45_A          238 DSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPY  305 (699)
T ss_dssp             --CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC
T ss_pred             cCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCCc
Confidence               23  345999999999999988642      11 2347664 56799999999999999877544

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=100.00  E-value=4.2e-33  Score=233.63  Aligned_cols=222  Identities=15%  Similarity=0.044  Sum_probs=174.9

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEec
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYS  105 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~  105 (294)
                      ||+||||||+||||++|++.|+++|++|++++|+....        .   ..++.++.+|++|.+.+.++++++|+|||+
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~---~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~   70 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA--------A---EAHEEIVACDLADAQAVHDLVKDCDGIIHL   70 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC--------C---CTTEEECCCCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc--------c---CCCccEEEccCCCHHHHHHHHcCCCEEEEC
Confidence            57899999999999999999999999999999986531        1   136789999999999999999999999999


Q ss_pred             CCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhH
Q 043792          106 FEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHG  185 (294)
Q Consensus       106 a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~  185 (294)
                      |+...  .......+++|+.++.++++++.+. ++++|||+||.++  |+...   ...+++|+++..+.      +.|+
T Consensus        71 a~~~~--~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~--~~~~~---~~~~~~E~~~~~~~------~~Y~  136 (267)
T 3ay3_A           71 GGVSV--ERPWNDILQANIIGAYNLYEAARNL-GKPRIVFASSNHT--IGYYP---RTTRIDTEVPRRPD------SLYG  136 (267)
T ss_dssp             CSCCS--CCCHHHHHHHTHHHHHHHHHHHHHT-TCCEEEEEEEGGG--STTSB---TTSCBCTTSCCCCC------SHHH
T ss_pred             CcCCC--CCCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCHHH--hCCCC---CCCCCCCCCCCCCC------ChHH
Confidence            99763  2233478999999999999999988 8899999999863  33211   13478888877766      8899


Q ss_pred             hhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHHHHHHHHhhhcCcCCCC-eEE
Q 043792          186 LSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVSSYG-RYL  264 (294)
Q Consensus       186 ~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~i~~~~~~~~~~~-~~~  264 (294)
                      .+|.++|.+++.+..+++++++++||+++|+..   .    .      ++....|+|++|+|++++.+++++..+. .|+
T Consensus       137 ~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~~~~---~----~------~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~  203 (267)
T 3ay3_A          137 LSKCFGEDLASLYYHKFDIETLNIRIGSCFPKP---K----D------ARMMATWLSVDDFMRLMKRAFVAPKLGCTVVY  203 (267)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCEEEEEECBCSSSC---C----S------HHHHHHBCCHHHHHHHHHHHHHSSCCCEEEEE
T ss_pred             HHHHHHHHHHHHHHHHcCCCEEEEeceeecCCC---C----C------CCeeeccccHHHHHHHHHHHHhCCCCCceeEe
Confidence            999999999999888889999999999998421   0    0      0112349999999999999998775533 354


Q ss_pred             e-ecccccHHHHHHHHHHHhCCCC
Q 043792          265 C-FNHVINCNEDAMKLARMLLPPS  287 (294)
Q Consensus       265 ~-~~~~~s~~~~~~~~~~~~~~~~  287 (294)
                      + .+...++.++.+.  +.+|-+.
T Consensus       204 ~~~~~~~~~~d~~~~--~~lg~~p  225 (267)
T 3ay3_A          204 GASANTESWWDNDKS--AFLGWVP  225 (267)
T ss_dssp             ECCSCSSCCBCCGGG--GGGCCCC
T ss_pred             cCCCccccccCHHHH--HHcCCCC
Confidence            4 4445666666665  5566443

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=100.00  E-value=1.4e-32  Score=250.57  Aligned_cols=249  Identities=10%  Similarity=0.024  Sum_probs=180.8

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChh---hHHHHHhh-------ccCCCCeEEEECCCCChhHHH
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQ---CIEEELIN-------YNEEKKLKVFQADPFDYHSLV   93 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~l~~~~~~-------~~~~~~v~~~~~Dl~~~~~~~   93 (294)
                      ..+|+|||||||||||++|+++|+++|++|++++|+..+..   .+.+.+..       .....+++++.+|+.+++.+.
T Consensus       148 ~~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~  227 (508)
T 4f6l_B          148 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV  227 (508)
T ss_dssp             CCCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC
T ss_pred             CCCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC
Confidence            34689999999999999999999999999999999887432   22111100       112468999999999987777


Q ss_pred             HHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCC
Q 043792           94 NALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSD  173 (294)
Q Consensus        94 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~  173 (294)
                       .+.++|+|||||+...... .....+++|+.++.+++++|.+  +.++|||+||.++ +..... .+...+++|+++..
T Consensus       228 -~~~~~D~Vih~Aa~~~~~~-~~~~~~~~Nv~gt~~ll~~a~~--~~~~~v~iSS~~v-G~~~~~-~~~~~~~~E~~~~~  301 (508)
T 4f6l_B          228 -LPENMDTIIHAGARTDHFG-DDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTISV-GTYFDI-DTEDVTFSEADVYK  301 (508)
T ss_dssp             -CSSCCSEEEECCCC---------CCHHHHHHHHHHHHHHHHT--TTCEEEEEEESCT-TSEECT-TCSCCEECTTCSCS
T ss_pred             -CccCCCEEEECCceecCCC-CHHHHhhhHHHHHHHHHHHHHh--CCCcEEEeCChhh-ccCCcc-CCcCcccccccccc
Confidence             6778999999999865322 3347889999999999999987  3489999999874 111010 12245788887743


Q ss_pred             hhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCC---C-------c----cccccc-cc-cCCCc
Q 043792          174 VNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTIS---N-------P----YLKGAA-EM-YEDGV  237 (294)
Q Consensus       174 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~---~-------~----~~~~~~-~~-~~~~~  237 (294)
                      +..   +.+.|+.+|+++|++++.++. .|++++++||++|||+.....   +       .    ..++.. +. .++..
T Consensus       302 ~~~---~~~~Y~~sK~~~E~~~~~~~~-~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~  377 (508)
T 4f6l_B          302 GQL---LTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMP  377 (508)
T ss_dssp             SBC---CCSHHHHHHHHHHHHHHHHHH-TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGSE
T ss_pred             ccc---CCCcHHHHHHHHHHHHHHHHH-cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCce
Confidence            221   228899999999999999754 699999999999999985432   1       0    111221 11 12455


Q ss_pred             cccccHHHHHHHHHhhhcCcCCCCeEEee-cccccHHHHHHHHHHH
Q 043792          238 MASVDLRFYVDAHICVFEDVSSYGRYLCF-NHVINCNEDAMKLARM  282 (294)
Q Consensus       238 ~~~v~v~D~a~~i~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~  282 (294)
                      ..|+|++|+|++++.++.++..++.|++. ++.+++.|+++.+.+.
T Consensus       378 ~~~v~v~DvA~ai~~~~~~~~~~~~~nl~~~~~~s~~el~~~i~~~  423 (508)
T 4f6l_B          378 VDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKRK  423 (508)
T ss_dssp             EECEEHHHHHHHHHHHTTBCCSCSEEEESCSCEEEHHHHHHHHHSS
T ss_pred             EEEEcHHHHHHHHHHHHhCCCCCCEEEeCCCCCCCHHHHHHHHHHc
Confidence            56999999999999999887755568665 5679999999999863

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=100.00  E-value=1.1e-32  Score=228.96  Aligned_cols=227  Identities=15%  Similarity=0.090  Sum_probs=170.2

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHC--CCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLR--GYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ++|+||||||+|+||+++++.|+++  |++|++++|++++.+   .   .   ..++.++.+|++|.+++.++++++|+|
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~---~---~---~~~~~~~~~D~~d~~~~~~~~~~~d~v   73 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKE---K---I---GGEADVFIGDITDADSINPAFQGIDAL   73 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHH---H---T---TCCTTEEECCTTSHHHHHHHHTTCSEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchh---h---c---CCCeeEEEecCCCHHHHHHHHcCCCEE
Confidence            4689999999999999999999999  899999999754322   2   1   246789999999999999999999999


Q ss_pred             EecCCCCCCCC--------cch-------hhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792          103 FYSFEPPSDHS--------TYD-------ELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus       103 ih~a~~~~~~~--------~~~-------~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                      ||+|+......        ...       ...+++|+.++.++++++++. ++++||++||.++  +.            
T Consensus        74 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~--~~------------  138 (253)
T 1xq6_A           74 VILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-GVKHIVVVGSMGG--TN------------  138 (253)
T ss_dssp             EECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-TCSEEEEEEETTT--TC------------
T ss_pred             EEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc-CCCEEEEEcCccC--CC------------
Confidence            99998653210        001       145789999999999999998 8899999999752  11            


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCccccccc-cccCCCccccccHHHH
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAA-EMYEDGVMASVDLRFY  246 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~~~~~~~-~~~~~~~~~~v~v~D~  246 (294)
                      +..+..+.   . ...|+.+|..+|.+++.    .+++++++||+.+||+...... +..+.. ..+. +...+++++|+
T Consensus       139 ~~~~~~~~---~-~~~y~~sK~~~e~~~~~----~~i~~~~vrpg~v~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~Dv  208 (253)
T 1xq6_A          139 PDHPLNKL---G-NGNILVWKRKAEQYLAD----SGTPYTIIRAGGLLDKEGGVRE-LLVGKDDELLQ-TDTKTVPRADV  208 (253)
T ss_dssp             TTCGGGGG---G-GCCHHHHHHHHHHHHHT----SSSCEEEEEECEEECSCSSSSC-EEEESTTGGGG-SSCCEEEHHHH
T ss_pred             CCCccccc---c-chhHHHHHHHHHHHHHh----CCCceEEEecceeecCCcchhh-hhccCCcCCcC-CCCcEEcHHHH
Confidence            11110000   0 03588899999988764    6899999999999999743222 222222 2222 23459999999


Q ss_pred             HHHHHhhhcCcCCCC-eEEeecc----cccHHHHHHHHHHHhCC
Q 043792          247 VDAHICVFEDVSSYG-RYLCFNH----VINCNEDAMKLARMLLP  285 (294)
Q Consensus       247 a~~i~~~~~~~~~~~-~~~~~~~----~~s~~~~~~~~~~~~~~  285 (294)
                      |++++.++.++...+ .|++.++    .+++.|+++.+.+.+|+
T Consensus       209 a~~~~~~~~~~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~  252 (253)
T 1xq6_A          209 AEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR  252 (253)
T ss_dssp             HHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred             HHHHHHHHcCccccCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence            999999998876555 4766543    48999999999987775

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=100.00  E-value=8.8e-32  Score=233.85  Aligned_cols=224  Identities=12%  Similarity=0.011  Sum_probs=171.8

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC-hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCCEE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK-LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCSGL  102 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~V  102 (294)
                      +|+|||||||||||++|++.|+++|++|++++|+.+. ...... + ......+++++.+|+.|.+++.++++  ++|+|
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~-~-~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~V   87 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKI-F-KALEDKGAIIVYGLINEQEAMEKILKEHEIDIV   87 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHH-H-HHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHH-H-HHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEE
Confidence            5799999999999999999999999999999998732 222211 0 00112489999999999999999999  99999


Q ss_pred             EecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCC-CcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhcc
Q 043792          103 FYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNT-VDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFK  181 (294)
Q Consensus       103 ih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  181 (294)
                      ||+++.             .|+.++.+++++|++. + +++||+ |+.     +.        ..+|+.+..+.      
T Consensus        88 i~~a~~-------------~n~~~~~~l~~aa~~~-g~v~~~v~-S~~-----g~--------~~~e~~~~~p~------  133 (346)
T 3i6i_A           88 VSTVGG-------------ESILDQIALVKAMKAV-GTIKRFLP-SEF-----GH--------DVNRADPVEPG------  133 (346)
T ss_dssp             EECCCG-------------GGGGGHHHHHHHHHHH-CCCSEEEC-SCC-----SS--------CTTTCCCCTTH------
T ss_pred             EECCch-------------hhHHHHHHHHHHHHHc-CCceEEee-ccc-----CC--------CCCccCcCCCc------
Confidence            999986             2788899999999999 7 999986 432     21        34455555555      


Q ss_pred             chhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc----c-ccccccccCCC--ccccccHHHHHHHHHhhh
Q 043792          182 LWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP----Y-LKGAAEMYEDG--VMASVDLRFYVDAHICVF  254 (294)
Q Consensus       182 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~----~-~~~~~~~~~~~--~~~~v~v~D~a~~i~~~~  254 (294)
                      ..|+.+|..+|++++.    .+++++++||+.++|........    . ..+...+++++  ...|+|++|+|++++.++
T Consensus       134 ~~y~~sK~~~e~~l~~----~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l  209 (346)
T 3i6i_A          134 LNMYREKRRVRQLVEE----SGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTV  209 (346)
T ss_dssp             HHHHHHHHHHHHHHHH----TTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHT
T ss_pred             chHHHHHHHHHHHHHH----cCCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHH
Confidence            7899999999998876    68999999999999976322111    1 12222455554  445999999999999999


Q ss_pred             cCcCCCCe-EEee--cccccHHHHHHHHHHHhCCCCCC
Q 043792          255 EDVSSYGR-YLCF--NHVINCNEDAMKLARMLLPPSDT  289 (294)
Q Consensus       255 ~~~~~~~~-~~~~--~~~~s~~~~~~~~~~~~~~~~~~  289 (294)
                      .++...++ |++.  ++.+|+.|+++.+.+.+|.+.++
T Consensus       210 ~~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~g~~~~~  247 (346)
T 3i6i_A          210 DDVRTLNKSVHFRPSCNCLNINELASVWEKKIGRTLPR  247 (346)
T ss_dssp             TCGGGTTEEEECCCGGGEECHHHHHHHHHHHHTSCCCE
T ss_pred             hCccccCeEEEEeCCCCCCCHHHHHHHHHHHHCCCCce
Confidence            98765454 5554  46899999999999999988654

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=100.00  E-value=1.8e-32  Score=249.94  Aligned_cols=231  Identities=16%  Similarity=0.131  Sum_probs=169.0

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEec
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYS  105 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~  105 (294)
                      +|+|||||||||||++|++.|+++|++|++++|+..+.                ..+.+|+.+.  +.+++.++|+||||
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~----------------~~v~~d~~~~--~~~~l~~~D~Vih~  208 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP----------------GKRFWDPLNP--ASDLLDGADVLVHL  208 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT----------------TCEECCTTSC--CTTTTTTCSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc----------------cceeecccch--hHHhcCCCCEEEEC
Confidence            78999999999999999999999999999999987542                1256677643  45567899999999


Q ss_pred             CCCCCCC---CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeC-CCCCCCCCCCCCCCCCCChhhhhhcc
Q 043792          106 FEPPSDH---STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWN-NHRDNPTSHDFDERNWSDVNLCKKFK  181 (294)
Q Consensus       106 a~~~~~~---~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~~~  181 (294)
                      |+.....   ......++++|+.++.++++++.+..++++|||+||.+  +|+ ...    ..+++|+.+. +.      
T Consensus       209 A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~--vyg~~~~----~~~~~E~~~~-~~------  275 (516)
T 3oh8_A          209 AGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVG--FYGHDRG----DEILTEESES-GD------  275 (516)
T ss_dssp             CCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGG--GGCSEEE----EEEECTTSCC-CS------
T ss_pred             CCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcce--EecCCCC----CCccCCCCCC-Cc------
Confidence            9976432   22344788999999999999944433889999999986  444 222    3477888765 33      


Q ss_pred             chhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc----cccccccccCCCc--cccccHHHHHHHHHhhhc
Q 043792          182 LWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP----YLKGAAEMYEDGV--MASVDLRFYVDAHICVFE  255 (294)
Q Consensus       182 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~----~~~~~~~~~~~~~--~~~v~v~D~a~~i~~~~~  255 (294)
                      +.|+.+|...|.++.. ..+.|++++++||++|||+.......    +..+....++++.  ..|||++|+|++++.+++
T Consensus       276 ~~y~~~~~~~E~~~~~-~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~  354 (516)
T 3oh8_A          276 DFLAEVCRDWEHATAP-ASDAGKRVAFIRTGVALSGRGGMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIV  354 (516)
T ss_dssp             SHHHHHHHHHHHTTHH-HHHTTCEEEEEEECEEEBTTBSHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHH-HHhCCCCEEEEEeeEEECCCCChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHHh
Confidence            6799999999987654 45679999999999999998311111    2333334455444  459999999999999998


Q ss_pred             CcCCCCeEEe-ecccccHHHHHHHHHHHhCCCCC
Q 043792          256 DVSSYGRYLC-FNHVINCNEDAMKLARMLLPPSD  288 (294)
Q Consensus       256 ~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~  288 (294)
                      ++...+.|++ +++.+++.|+++.+++.+|.+..
T Consensus       355 ~~~~~g~~ni~~~~~~s~~el~~~i~~~~g~~~~  388 (516)
T 3oh8_A          355 DAQISGPINAVAPNPVSNADMTKILATSMHRPAF  388 (516)
T ss_dssp             CTTCCEEEEESCSCCEEHHHHHHHTTC-------
T ss_pred             CcccCCcEEEECCCCCCHHHHHHHHHHHhCCCCC
Confidence            8776777765 45679999999999998887653

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.98  E-value=5.4e-32  Score=237.23  Aligned_cols=205  Identities=13%  Similarity=0.003  Sum_probs=166.5

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEec
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYS  105 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~  105 (294)
                      |||||||||||||++|++.|+++|+ +|++++|+                           .|.+++.++++++|+|||+
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~---------------------------~d~~~l~~~~~~~d~Vih~   53 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ---------------------------TKEEELESALLKADFIVHL   53 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT---------------------------CCHHHHHHHHHHCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC---------------------------CCHHHHHHHhccCCEEEEC
Confidence            6899999999999999999999998 77775543                           5778888899999999999


Q ss_pred             CCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCc-EEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchh
Q 043792          106 FEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD-KVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWH  184 (294)
Q Consensus       106 a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y  184 (294)
                      |+.....  .....++.|+.++.+++++|++. +++ +|||+||.++  ++  .                       +.|
T Consensus        54 a~~~~~~--~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~Ss~~~--~~--~-----------------------~~Y  103 (369)
T 3st7_A           54 AGVNRPE--HDKEFSLGNVSYLDHVLDILTRN-TKKPAILLSSSIQA--TQ--D-----------------------NPY  103 (369)
T ss_dssp             CCSBCTT--CSTTCSSSCCBHHHHHHHHHTTC-SSCCEEEEEEEGGG--GS--C-----------------------SHH
T ss_pred             CcCCCCC--CHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEeCchhh--cC--C-----------------------CCc
Confidence            9976542  23467889999999999999998 777 9999999863  22  2                       789


Q ss_pred             HhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCC-c--------ccccccccc--CCCccccccHHHHHHHHHhh
Q 043792          185 GLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISN-P--------YLKGAAEMY--EDGVMASVDLRFYVDAHICV  253 (294)
Q Consensus       185 ~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~-~--------~~~~~~~~~--~~~~~~~v~v~D~a~~i~~~  253 (294)
                      +.+|.++|++++.++++.+++++++||+++||+...... .        +..+.+...  ++....|+|++|+|++++.+
T Consensus       104 ~~sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  183 (369)
T 3st7_A          104 GESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRA  183 (369)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHH
Confidence            999999999999999989999999999999999854321 1        234444222  33445599999999999999


Q ss_pred             hcCcCC--CCeEEee-cccccHHHHHHHHHHHhCCCCC
Q 043792          254 FEDVSS--YGRYLCF-NHVINCNEDAMKLARMLLPPSD  288 (294)
Q Consensus       254 ~~~~~~--~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~  288 (294)
                      ++++..  ++.|++. ++.+|+.|+++.+.+.+|.+..
T Consensus       184 l~~~~~~~~~~~~i~~~~~~s~~e~~~~~~~~~g~~~~  221 (369)
T 3st7_A          184 IEGTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQSRLD  221 (369)
T ss_dssp             HHTCCCEETTEECCSCCEEEEHHHHHHHHHHHHHHHHH
T ss_pred             HhCCcccCCceEEeCCCCceeHHHHHHHHHHHhCCCcc
Confidence            988776  4567665 4679999999999998876533

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.98  E-value=1e-31  Score=227.70  Aligned_cols=220  Identities=18%  Similarity=0.183  Sum_probs=165.4

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHC-CCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEec
Q 043792           27 KTVCVMDASGHFASALVRRLLLR-GYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYS  105 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~  105 (294)
                      |+|||||||||||+++++.|+++ |++|++++|++++...+.        ..+++++.+|++|++++.++++++|+|||+
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~--------~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~   72 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW--------RGKVSVRQLDYFNQESMVEAFKGMDTVVFI   72 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG--------BTTBEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh--------hCCCEEEEcCCCCHHHHHHHHhCCCEEEEe
Confidence            57999999999999999999998 999999999876544332        247999999999999999999999999999


Q ss_pred             CCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhH
Q 043792          106 FEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHG  185 (294)
Q Consensus       106 a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~  185 (294)
                      ++....        ...|+.++.+++++|++. ++++|||+||.+.     ..    .                  .+|.
T Consensus        73 a~~~~~--------~~~~~~~~~~l~~aa~~~-gv~~iv~~Ss~~~-----~~----~------------------~~~~  116 (289)
T 3e48_A           73 PSIIHP--------SFKRIPEVENLVYAAKQS-GVAHIIFIGYYAD-----QH----N------------------NPFH  116 (289)
T ss_dssp             CCCCCS--------HHHHHHHHHHHHHHHHHT-TCCEEEEEEESCC-----ST----T------------------CCST
T ss_pred             CCCCcc--------chhhHHHHHHHHHHHHHc-CCCEEEEEcccCC-----CC----C------------------CCCc
Confidence            987542        245899999999999999 8999999999531     11    1                  1122


Q ss_pred             hhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCcccccccccc--CCCccccccHHHHHHHHHhhhcCcCCCC-e
Q 043792          186 LSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAAEMY--EDGVMASVDLRFYVDAHICVFEDVSSYG-R  262 (294)
Q Consensus       186 ~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~--~~~~~~~v~v~D~a~~i~~~~~~~~~~~-~  262 (294)
                      .++...  +++.+..+.+++++++||+.+||+.......+..+....+  ++....|++++|+|++++.++.++...+ .
T Consensus       117 ~~~~~~--~~e~~~~~~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g~~  194 (289)
T 3e48_A          117 MSPYFG--YASRLLSTSGIDYTYVRMAMYMDPLKPYLPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTWGKR  194 (289)
T ss_dssp             THHHHH--HHHHHHHHHCCEEEEEEECEESTTHHHHHHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGGTTCE
T ss_pred             cchhHH--HHHHHHHHcCCCEEEEeccccccccHHHHHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCcCCce
Confidence            222211  2223334579999999999999975211111222222223  3445569999999999999998876644 5


Q ss_pred             EEeecccccHHHHHHHHHHHhCCCCCCCCC
Q 043792          263 YLCFNHVINCNEDAMKLARMLLPPSDTSTP  292 (294)
Q Consensus       263 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~  292 (294)
                      |++.++.+|+.|+++.+.+.+|.+.++...
T Consensus       195 ~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~  224 (289)
T 3e48_A          195 YLLSGYSYDMKELAAILSEASGTEIKYEPV  224 (289)
T ss_dssp             EEECCEEEEHHHHHHHHHHHHTSCCEECCC
T ss_pred             EEeCCCcCCHHHHHHHHHHHHCCceeEEeC
Confidence            766677899999999999999988665443

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.98  E-value=9.5e-32  Score=227.41  Aligned_cols=213  Identities=20%  Similarity=0.180  Sum_probs=163.7

Q ss_pred             eEEEeCCCchHHHHHHHHHHHC--CCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEec
Q 043792           28 TVCVMDASGHFASALVRRLLLR--GYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYS  105 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~  105 (294)
                      +|||||||||||+++++.|+++  |++|++++|++++...+..        .+++++.+|++|++++.++++++|+|||+
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~D~~d~~~~~~~~~~~d~vi~~   72 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA--------QGITVRQADYGDEAALTSALQGVEKLLLI   72 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH--------TTCEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc--------CCCeEEEcCCCCHHHHHHHHhCCCEEEEe
Confidence            5899999999999999999998  9999999998776555443        37899999999999999999999999999


Q ss_pred             CCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhH
Q 043792          106 FEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHG  185 (294)
Q Consensus       106 a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~  185 (294)
                      ++...          ..|+.++.+++++|++. ++++||++||.+++  . ..                       ..|+
T Consensus        73 a~~~~----------~~~~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~--~-~~-----------------------~~y~  115 (286)
T 2zcu_A           73 SSSEV----------GQRAPQHRNVINAAKAA-GVKFIAYTSLLHAD--T-SP-----------------------LGLA  115 (286)
T ss_dssp             C------------------CHHHHHHHHHHHH-TCCEEEEEEETTTT--T-CC-----------------------STTH
T ss_pred             CCCCc----------hHHHHHHHHHHHHHHHc-CCCEEEEECCCCCC--C-Cc-----------------------chhH
Confidence            98531          24788999999999999 89999999997531  1 01                       4699


Q ss_pred             hhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCccccccccccC--CCccccccHHHHHHHHHhhhcCcCCCC-e
Q 043792          186 LSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAAEMYE--DGVMASVDLRFYVDAHICVFEDVSSYG-R  262 (294)
Q Consensus       186 ~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~--~~~~~~v~v~D~a~~i~~~~~~~~~~~-~  262 (294)
                      .+|..+|.+++.    .+++++++||+.++++.........++....++  +....|+|++|+|++++.++.++...+ .
T Consensus       116 ~sK~~~e~~~~~----~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~  191 (286)
T 2zcu_A          116 DEHIETEKMLAD----SGIVYTLLRNGWYSENYLASAPAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAGHEGKV  191 (286)
T ss_dssp             HHHHHHHHHHHH----HCSEEEEEEECCBHHHHHTTHHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTCE
T ss_pred             HHHHHHHHHHHH----cCCCeEEEeChHHhhhhHHHhHHhhcCCceeccCCCCccccccHHHHHHHHHHHhcCCCCCCce
Confidence            999999998864    589999999988776542110011222221233  445569999999999999998765444 5


Q ss_pred             EEeecc-cccHHHHHHHHHHHhCCCCCC
Q 043792          263 YLCFNH-VINCNEDAMKLARMLLPPSDT  289 (294)
Q Consensus       263 ~~~~~~-~~s~~~~~~~~~~~~~~~~~~  289 (294)
                      |++.++ .+|+.|+++.+.+.+|.+.++
T Consensus       192 ~~i~~~~~~s~~e~~~~i~~~~g~~~~~  219 (286)
T 2zcu_A          192 YELAGDSAWTLTQLAAELTKQSGKQVTY  219 (286)
T ss_dssp             EEECCSSCBCHHHHHHHHHHHHSSCCEE
T ss_pred             EEEeCCCcCCHHHHHHHHHHHHCCCCce
Confidence            877654 799999999999999987543

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.97  E-value=5.3e-31  Score=224.38  Aligned_cols=226  Identities=16%  Similarity=0.083  Sum_probs=173.6

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCChh--hHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQ--CIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~--~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      +|+|+||||||+||+++++.|+++| ++|++++|++++..  .+..        .+++++.+|+.|++++.++++++|+|
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~--------~~~~~~~~D~~d~~~l~~~~~~~d~v   76 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRL--------QGAEVVQGDQDDQVIMELALNGAYAT   76 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHH--------TTCEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHH--------CCCEEEEecCCCHHHHHHHHhcCCEE
Confidence            5799999999999999999999999 99999999876642  2222        37899999999999999999999999


Q ss_pred             EecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccc
Q 043792          103 FYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL  182 (294)
Q Consensus       103 ih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  182 (294)
                      ||+++....      ...+.|+.++.++++++++. ++++||++|+.+  .++...          ..   +.      .
T Consensus        77 i~~a~~~~~------~~~~~~~~~~~~~~~aa~~~-gv~~iv~~S~~~--~~~~~~----------~~---~~------~  128 (299)
T 2wm3_A           77 FIVTNYWES------CSQEQEVKQGKLLADLARRL-GLHYVVYSGLEN--IKKLTA----------GR---LA------A  128 (299)
T ss_dssp             EECCCHHHH------TCHHHHHHHHHHHHHHHHHH-TCSEEEECCCCC--HHHHTT----------TS---CC------C
T ss_pred             EEeCCCCcc------ccchHHHHHHHHHHHHHHHc-CCCEEEEEcCcc--ccccCC----------Cc---cc------C
Confidence            999874221      12457888999999999998 899999977754  222111          00   01      6


Q ss_pred             hhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc--cccccc--cc--cCCCccccccHHHHHHHHHhhhcC
Q 043792          183 WHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP--YLKGAA--EM--YEDGVMASVDLRFYVDAHICVFED  256 (294)
Q Consensus       183 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~--~~~~~~--~~--~~~~~~~~v~v~D~a~~i~~~~~~  256 (294)
                      .|+.+|..+|.+++.    .+++++++||+.+||+.......  ...+..  ..  .++....|+|++|+|++++.++.+
T Consensus       129 ~y~~sK~~~e~~~~~----~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~  204 (299)
T 2wm3_A          129 AHFDGKGEVEEYFRD----IGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKM  204 (299)
T ss_dssp             HHHHHHHHHHHHHHH----HTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHS
T ss_pred             chhhHHHHHHHHHHH----CCCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcC
Confidence            799999999998875    58999999999999986321111  223321  11  244556699999999999999987


Q ss_pred             cC-CCC-eEEeecccccHHHHHHHHHHHhCCCCCCCC
Q 043792          257 VS-SYG-RYLCFNHVINCNEDAMKLARMLLPPSDTST  291 (294)
Q Consensus       257 ~~-~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~  291 (294)
                      +. ..+ .|.+.++.+|+.|+++.+.+.+|.+.....
T Consensus       205 ~~~~~g~~~~~~g~~~s~~e~~~~~~~~~g~~~~~~~  241 (299)
T 2wm3_A          205 PEKYVGQNIGLSTCRHTAEEYAALLTKHTRKVVHDAK  241 (299)
T ss_dssp             HHHHTTCEEECCSEEECHHHHHHHHHHHHSSCEEECC
T ss_pred             hhhhCCeEEEeeeccCCHHHHHHHHHHHHCCCceeEe
Confidence            52 234 577777789999999999999998765433

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.97  E-value=1.7e-31  Score=224.32  Aligned_cols=222  Identities=15%  Similarity=0.124  Sum_probs=173.5

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc--CCEEEe
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG--CSGLFY  104 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~Vih  104 (294)
                      |+||||||+||||+++++.|+ +|++|++++|++...             .+   +.+|++|++++.+++++  +|+|||
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~-------------~~---~~~Dl~~~~~~~~~~~~~~~d~vi~   63 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ-------------GG---YKLDLTDFPRLEDFIIKKRPDVIIN   63 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT-------------TC---EECCTTSHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC-------------CC---ceeccCCHHHHHHHHHhcCCCEEEE
Confidence            579999999999999999999 589999999986421             13   78999999999999986  999999


Q ss_pred             cCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccc
Q 043792          105 SFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL  182 (294)
Q Consensus       105 ~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  182 (294)
                      ||+.....  ....+..+++|+.++.++++++.+. ++ +||++||.++  |+...    . +++|+++..+.      +
T Consensus        64 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~iv~~SS~~~--~~~~~----~-~~~e~~~~~~~------~  128 (273)
T 2ggs_A           64 AAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVI-DS-YIVHISTDYV--FDGEK----G-NYKEEDIPNPI------N  128 (273)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TC-EEEEEEEGGG--SCSSS----C-SBCTTSCCCCS------S
T ss_pred             CCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHh-CC-eEEEEeccee--EcCCC----C-CcCCCCCCCCC------C
Confidence            99976532  1223478999999999999999988 76 9999999863  43322    2 67888776665      8


Q ss_pred             hhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc---cccccc-cccCCCccccccHHHHHHHHHhhhcCcC
Q 043792          183 WHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP---YLKGAA-EMYEDGVMASVDLRFYVDAHICVFEDVS  258 (294)
Q Consensus       183 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~---~~~~~~-~~~~~~~~~~v~v~D~a~~i~~~~~~~~  258 (294)
                      .|+.+|.++|.+++.      ++++++||+.+||+.......   +.++.. ...++ ...++|++|+|++++.++.++.
T Consensus       129 ~Y~~sK~~~e~~~~~------~~~~~iR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~i~~~~~~~~  201 (273)
T 2ggs_A          129 YYGLSKLLGETFALQ------DDSLIIRTSGIFRNKGFPIYVYKTLKEGKTVFAFKG-YYSPISARKLASAILELLELRK  201 (273)
T ss_dssp             HHHHHHHHHHHHHCC------TTCEEEEECCCBSSSSHHHHHHHHHHTTCCEEEESC-EECCCBHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHhC------CCeEEEeccccccccHHHHHHHHHHHcCCCEEeecC-CCCceEHHHHHHHHHHHHhcCc
Confidence            899999999998875      678999999999832100000   123333 33444 5569999999999999998654


Q ss_pred             CCCeEEeecccccHHHHHHHHHHHhCCCCC
Q 043792          259 SYGRYLCFNHVINCNEDAMKLARMLLPPSD  288 (294)
Q Consensus       259 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~  288 (294)
                       ++.|++.++.+++.|+++.+.+.+|.+.+
T Consensus       202 -~g~~~i~~~~~s~~e~~~~~~~~~g~~~~  230 (273)
T 2ggs_A          202 -TGIIHVAGERISRFELALKIKEKFNLPGE  230 (273)
T ss_dssp             -CEEEECCCCCEEHHHHHHHHHHHTTCCSC
T ss_pred             -CCeEEECCCcccHHHHHHHHHHHhCCChh
Confidence             45787766779999999999999987754

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.97  E-value=2.5e-30  Score=224.95  Aligned_cols=219  Identities=15%  Similarity=0.159  Sum_probs=168.8

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCCh--hhHHHHHhhccCCCCeEEEECC-CCChhHHHHHhccCCEE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKL--QCIEEELINYNEEKKLKVFQAD-PFDYHSLVNALKGCSGL  102 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~l~~~~~~~~~~~~v~~~~~D-l~~~~~~~~~~~~~d~V  102 (294)
                      +|+|+|||||||||++|++.|+++|++|++++|+.++.  ..+.       ...+++++.+| ++|.+++.++++++|+|
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~-------~~~~v~~v~~D~l~d~~~l~~~~~~~d~V   77 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQ-------AIPNVTLFQGPLLNNVPLMDTLFEGAHLA   77 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHH-------TSTTEEEEESCCTTCHHHHHHHHTTCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHh-------hcCCcEEEECCccCCHHHHHHHHhcCCEE
Confidence            57899999999999999999999999999999987764  2221       12378999999 99999999999999999


Q ss_pred             EecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCC-CcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhcc
Q 043792          103 FYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNT-VDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFK  181 (294)
Q Consensus       103 ih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  181 (294)
                      ||+++...         ...|..+ .+++++|++. + +++|||+||.++..++...                .      
T Consensus        78 i~~a~~~~---------~~~~~~~-~~l~~aa~~~-g~v~~~V~~SS~~~~~~~~~~----------------~------  124 (352)
T 1xgk_A           78 FINTTSQA---------GDEIAIG-KDLADAAKRA-GTIQHYIYSSMPDHSLYGPWP----------------A------  124 (352)
T ss_dssp             EECCCSTT---------SCHHHHH-HHHHHHHHHH-SCCSEEEEEECCCGGGTSSCC----------------C------
T ss_pred             EEcCCCCC---------cHHHHHH-HHHHHHHHHc-CCccEEEEeCCccccccCCCC----------------C------
Confidence            99987532         1346666 9999999998 7 9999999997421222110                1      


Q ss_pred             chhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCC-cc------ccccc--ccc--CCCccccccH-HHHHHH
Q 043792          182 LWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISN-PY------LKGAA--EMY--EDGVMASVDL-RFYVDA  249 (294)
Q Consensus       182 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~-~~------~~~~~--~~~--~~~~~~~v~v-~D~a~~  249 (294)
                      ..|+.+|..+|++++.    .+++++++||+ +||++..... .+      ..+..  .+.  ++....|+|+ +|+|++
T Consensus       125 ~~y~~sK~~~E~~~~~----~gi~~~ivrpg-~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~a  199 (352)
T 1xgk_A          125 VPMWAPKFTVENYVRQ----LGLPSTFVYAG-IYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPA  199 (352)
T ss_dssp             CTTTHHHHHHHHHHHT----SSSCEEEEEEC-EEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHH----cCCCEEEEecc-eecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHH
Confidence            6799999999998876    48999999986 6888743221 11      12332  112  4455669999 899999


Q ss_pred             HHhhhcCcC---CCCeEEeecccccHHHHHHHHHHHhCCCCCC
Q 043792          250 HICVFEDVS---SYGRYLCFNHVINCNEDAMKLARMLLPPSDT  289 (294)
Q Consensus       250 i~~~~~~~~---~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~  289 (294)
                      ++.++.++.   .++.|++.++.+|+.|+++.+.+.+|.+.++
T Consensus       200 i~~~l~~~~~~~~g~~~~l~~~~~s~~e~~~~i~~~~G~~~~~  242 (352)
T 1xgk_A          200 LLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRALNRRVTY  242 (352)
T ss_dssp             HHHHHHHCHHHHTTCEEEECSEEECHHHHHHHHHHHHTSCEEE
T ss_pred             HHHHHhCCchhhCCeEEEEecCCCCHHHHHHHHHHHHCCCCce
Confidence            999997652   2446888888899999999999999987543

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.97  E-value=2.6e-31  Score=215.43  Aligned_cols=199  Identities=14%  Similarity=0.081  Sum_probs=154.6

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCC--eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGY--TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ++|+|+||||+|+||+++++.|+++|+  +|++++|++.+            ...+++++.+|++|.+++.+++  +|+|
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~------------~~~~~~~~~~D~~~~~~~~~~~--~d~v   69 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA------------EHPRLDNPVGPLAELLPQLDGS--IDTA   69 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC------------CCTTEECCBSCHHHHGGGCCSC--CSEE
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc------------cCCCceEEeccccCHHHHHHhh--hcEE
Confidence            457999999999999999999999998  99999998754            1237888999999998888777  9999


Q ss_pred             EecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccc
Q 043792          103 FYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL  182 (294)
Q Consensus       103 ih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  182 (294)
                      ||+++.........+..+++|+.++.++++++.+. ++++||++||.++  ++...                       +
T Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~--~~~~~-----------------------~  123 (215)
T 2a35_A           70 FCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVSALGA--DAKSS-----------------------I  123 (215)
T ss_dssp             EECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTC--CTTCS-----------------------S
T ss_pred             EECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHc-CCCEEEEECCccc--CCCCc-----------------------c
Confidence            99999754322334578899999999999999998 8899999999863  32211                       6


Q ss_pred             hhHhhHHHHHHHHHHHHHhcCCe-EEEEecCceeCCCCCCCC-ccccccccccCCCccccccHHHHHHHHHhhhcCcCCC
Q 043792          183 WHGLSKTLAEKTAWALAMDRGIS-MVSINGGLVMGPDVTISN-PYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVSSY  260 (294)
Q Consensus       183 ~Y~~sK~~~e~~~~~~~~~~~~~-~~ilrp~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~~i~~~~~~~~~~  260 (294)
                      .|+.+|.++|.+++.    .+++ ++++||+.+||+...... ..+.+......++...++|++|+|++++.+++++. +
T Consensus       124 ~y~~sK~~~e~~~~~----~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~-~  198 (215)
T 2a35_A          124 FYNRVKGELEQALQE----QGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRLALEEG-K  198 (215)
T ss_dssp             HHHHHHHHHHHHHTT----SCCSEEEEEECCSEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC-S
T ss_pred             HHHHHHHHHHHHHHH----cCCCeEEEEeCceeeCCCCcchHHHHHHHhhhhccCCCcCcEeHHHHHHHHHHHHhcCC-C
Confidence            799999999998875    4899 999999999999753111 01111112223345569999999999999998765 5


Q ss_pred             CeEEeecc
Q 043792          261 GRYLCFNH  268 (294)
Q Consensus       261 ~~~~~~~~  268 (294)
                      +.|++.++
T Consensus       199 ~~~~i~~~  206 (215)
T 2a35_A          199 GVRFVESD  206 (215)
T ss_dssp             EEEEEEHH
T ss_pred             CceEEcHH
Confidence            56776653

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.97  E-value=2.2e-29  Score=202.53  Aligned_cols=200  Identities=14%  Similarity=0.099  Sum_probs=150.9

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEecC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSF  106 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~a  106 (294)
                      |+|+||||||+||+++++.|+++|++|++++|++++...+        ...+++++.+|++|++++.++++++|+|||++
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   75 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE--------GPRPAHVVVGDVLQAADVDKTVAGQDAVIVLL   75 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS--------SCCCSEEEESCTTSHHHHHHHHTTCSEEEECC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc--------cCCceEEEEecCCCHHHHHHHHcCCCEEEECc
Confidence            7999999999999999999999999999999986543211        13478999999999999999999999999999


Q ss_pred             CCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHh
Q 043792          107 EPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGL  186 (294)
Q Consensus       107 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~  186 (294)
                      +.....     ...++|+.++.++++++++. ++++||++||.+  .++...    ..+.       +.      ..|+.
T Consensus        76 ~~~~~~-----~~~~~n~~~~~~~~~~~~~~-~~~~~v~~Ss~~--~~~~~~----~~~~-------~~------~~y~~  130 (206)
T 1hdo_A           76 GTRNDL-----SPTTVMSEGARNIVAAMKAH-GVDKVVACTSAF--LLWDPT----KVPP-------RL------QAVTD  130 (206)
T ss_dssp             CCTTCC-----SCCCHHHHHHHHHHHHHHHH-TCCEEEEECCGG--GTSCTT----CSCG-------GG------HHHHH
T ss_pred             cCCCCC-----CccchHHHHHHHHHHHHHHh-CCCeEEEEeeee--eccCcc----cccc-------cc------hhHHH
Confidence            875531     12358999999999999998 889999999986  333222    1010       12      78999


Q ss_pred             hHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHHHHHHHHhhhcCcCCCCe-EEe
Q 043792          187 SKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVSSYGR-YLC  265 (294)
Q Consensus       187 sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~i~~~~~~~~~~~~-~~~  265 (294)
                      +|..+|.+++.    .+++++++||+.++ +...... +.....   ......|++++|+|++++.+++++...|+ |.+
T Consensus       131 ~K~~~e~~~~~----~~i~~~~lrp~~~~-~~~~~~~-~~~~~~---~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i  201 (206)
T 1hdo_A          131 DHIRMHKVLRE----SGLKYVAVMPPHIG-DQPLTGA-YTVTLD---GRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYP  201 (206)
T ss_dssp             HHHHHHHHHHH----TCSEEEEECCSEEE-CCCCCSC-CEEESS---SCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEE
T ss_pred             HHHHHHHHHHh----CCCCEEEEeCCccc-CCCCCcc-eEeccc---CCCCCCccCHHHHHHHHHHHhcCccccccceee
Confidence            99999998853    68999999999983 3321111 111100   01103599999999999999988766564 666


Q ss_pred             ecc
Q 043792          266 FNH  268 (294)
Q Consensus       266 ~~~  268 (294)
                      .++
T Consensus       202 ~~g  204 (206)
T 1hdo_A          202 SHQ  204 (206)
T ss_dssp             ECC
T ss_pred             ecc
Confidence            654

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.97  E-value=4.6e-30  Score=211.94  Aligned_cols=202  Identities=14%  Similarity=0.044  Sum_probs=156.4

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCC--eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGY--TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ++|+|+||||+|+||+++++.|+++|+  +|++++|++++...+..        .++.++.+|++|.+++.++++++|+|
T Consensus        17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~--------~~~~~~~~D~~d~~~~~~~~~~~d~v   88 (242)
T 2bka_A           17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAY--------KNVNQEVVDFEKLDDYASAFQGHDVG   88 (242)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGG--------GGCEEEECCGGGGGGGGGGGSSCSEE
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccccc--------CCceEEecCcCCHHHHHHHhcCCCEE
Confidence            358999999999999999999999999  99999998765433211        26889999999999999999999999


Q ss_pred             EecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccc
Q 043792          103 FYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL  182 (294)
Q Consensus       103 ih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  182 (294)
                      ||||+..... ...+..+++|+.++.++++++++. ++++||++||.++  ++...                       .
T Consensus        89 i~~ag~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~-~~~~iv~~SS~~~--~~~~~-----------------------~  141 (242)
T 2bka_A           89 FCCLGTTRGK-AGAEGFVRVDRDYVLKSAELAKAG-GCKHFNLLSSKGA--DKSSN-----------------------F  141 (242)
T ss_dssp             EECCCCCHHH-HHHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTC--CTTCS-----------------------S
T ss_pred             EECCCccccc-CCcccceeeeHHHHHHHHHHHHHC-CCCEEEEEccCcC--CCCCc-----------------------c
Confidence            9999975321 123478899999999999999988 8899999999863  32211                       6


Q ss_pred             hhHhhHHHHHHHHHHHHHhcCC-eEEEEecCceeCCCCCCCCc--ccc----ccccccCCCccccccHHHHHHHHHhhhc
Q 043792          183 WHGLSKTLAEKTAWALAMDRGI-SMVSINGGLVMGPDVTISNP--YLK----GAAEMYEDGVMASVDLRFYVDAHICVFE  255 (294)
Q Consensus       183 ~Y~~sK~~~e~~~~~~~~~~~~-~~~ilrp~~i~G~~~~~~~~--~~~----~~~~~~~~~~~~~v~v~D~a~~i~~~~~  255 (294)
                      .|+.+|.+.|.+++.    .++ +++++||+.+||+.......  +..    ..+..++  ...+++++|+|++++.++.
T Consensus       142 ~Y~~sK~~~e~~~~~----~~~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~dva~~~~~~~~  215 (242)
T 2bka_A          142 LYLQVKGEVEAKVEE----LKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWA--SGHSVPVVTVVRAMLNNVV  215 (242)
T ss_dssp             HHHHHHHHHHHHHHT----TCCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGG--GGTEEEHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHh----cCCCCeEEEcCceecCCCCCCcHHHHHHHHhhcccCcccc--CCcccCHHHHHHHHHHHHh
Confidence            799999999998775    467 69999999999997321110  111    1111111  2348999999999999998


Q ss_pred             CcCCCCeEEeec
Q 043792          256 DVSSYGRYLCFN  267 (294)
Q Consensus       256 ~~~~~~~~~~~~  267 (294)
                      ++...+.|++.+
T Consensus       216 ~~~~~~~~~~~~  227 (242)
T 2bka_A          216 RPRDKQMELLEN  227 (242)
T ss_dssp             SCCCSSEEEEEH
T ss_pred             CccccCeeEeeH
Confidence            877667776654

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.97  E-value=5e-29  Score=210.35  Aligned_cols=231  Identities=13%  Similarity=-0.000  Sum_probs=165.9

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++|+||||||+|+||+++++.|+++|++|++++|+.+..+.+..+     ...++.++.+|++|.+++.++++      
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   77 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAA-----YPDRAEAISLDVTDGERIDVVAADVLARY   77 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHH-----CTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh-----ccCCceEEEeeCCCHHHHHHHHHHHHHhC
Confidence            3568999999999999999999999999999999988776665542     23579999999999999888876      


Q ss_pred             -cCCEEEecCCCCCCC----C--cchhhhHhHhhHHHHHH----HHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDH----S--TYDELTAEVETMAAHNV----LEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~----~--~~~~~~~~~n~~~~~~l----l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                       ++|+|||||+.....    .  ...+..+++|+.++.++    ++.+++. +.++||++||..+.......        
T Consensus        78 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~~~--------  148 (281)
T 3m1a_A           78 GRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRER-GSGSVVNISSFGGQLSFAGF--------  148 (281)
T ss_dssp             SCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTCCCTTC--------
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEcCccccCCCCCc--------
Confidence             689999999874321    1  11237899999995554    4445566 66899999998643211111        


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCcccccc------------cc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGA------------AE  231 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~------------~~  231 (294)
                                     +.|+.+|.+.|.+.+.++.+   +|++++++|||.++++............            ..
T Consensus       149 ---------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (281)
T 3m1a_A          149 ---------------SAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQL  213 (281)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHH
T ss_pred             ---------------hHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHH
Confidence                           78999999999999999887   6899999999999887632211100000            00


Q ss_pred             ccCCCccccccHHHHHHHHHhhhcCcCCCCeEEeeccc-ccHHHHHHHHHHHh
Q 043792          232 MYEDGVMASVDLRFYVDAHICVFEDVSSYGRYLCFNHV-INCNEDAMKLARML  283 (294)
Q Consensus       232 ~~~~~~~~~v~v~D~a~~i~~~~~~~~~~~~~~~~~~~-~s~~~~~~~~~~~~  283 (294)
                      ........+.+++|+|++++.++..+..++.|++.++. ..+.+....+.+.+
T Consensus       214 ~~~~~~~~~~~~~dva~a~~~~~~~~~~~~~~~l~s~~~~~i~g~~~~i~~~~  266 (281)
T 3m1a_A          214 VQGSDGSQPGDPAKAAAAIRLALDTEKTPLRLALGGDAVDFLTGHLDSVRAEL  266 (281)
T ss_dssp             HHC-----CBCHHHHHHHHHHHHHSSSCCSEEEESHHHHHHHHHHHHHHHHHH
T ss_pred             HhhccCCCCCCHHHHHHHHHHHHhCCCCCeEEecCchHHHHHHHHHHHHHHHH
Confidence            11122233899999999999999988776777766543 44555555555433

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.97  E-value=3.7e-29  Score=214.22  Aligned_cols=233  Identities=13%  Similarity=0.082  Sum_probs=167.5

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC--hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK--LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      +|+|+||||||+||+++++.|+++|++|++++|+.+.  .+.... + ......+++++.+|+.|++++.++++++|+||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~-~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi   81 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQM-L-LYFKQLGAKLIEASLDDHQRLVDALKQVDVVI   81 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHH-H-HHHHTTTCEEECCCSSCHHHHHHHHTTCSEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHH-H-HHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEE
Confidence            5789999999999999999999999999999998653  122111 0 00013478999999999999999999999999


Q ss_pred             ecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCC-CcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccc
Q 043792          104 YSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNT-VDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL  182 (294)
Q Consensus       104 h~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  182 (294)
                      |+++....         ..|+.++.+++++|++. + ++|||+ |+.     +...    ...   +.+..+.     ..
T Consensus        82 ~~a~~~~~---------~~~~~~~~~l~~aa~~~-g~v~~~v~-S~~-----g~~~----~~~---~~~~~p~-----~~  133 (313)
T 1qyd_A           82 SALAGGVL---------SHHILEQLKLVEAIKEA-GNIKRFLP-SEF-----GMDP----DIM---EHALQPG-----SI  133 (313)
T ss_dssp             ECCCCSSS---------STTTTTHHHHHHHHHHS-CCCSEEEC-SCC-----SSCT----TSC---CCCCSST-----TH
T ss_pred             ECCccccc---------hhhHHHHHHHHHHHHhc-CCCceEEe-cCC-----cCCc----ccc---ccCCCCC-----cc
Confidence            99987542         13678899999999999 7 999985 432     2111    101   1111111     14


Q ss_pred             hhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCcc-----ccccc-cccCCC--ccccccHHHHHHHHHhhh
Q 043792          183 WHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPY-----LKGAA-EMYEDG--VMASVDLRFYVDAHICVF  254 (294)
Q Consensus       183 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~~-----~~~~~-~~~~~~--~~~~v~v~D~a~~i~~~~  254 (294)
                      .| .+|..+|++++.    .+++++++||+.++|+........     ..+.. ..++++  ...|+|++|+|++++.++
T Consensus       134 ~y-~sK~~~e~~~~~----~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l  208 (313)
T 1qyd_A          134 TF-IDKRKVRRAIEA----ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSI  208 (313)
T ss_dssp             HH-HHHHHHHHHHHH----TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHT
T ss_pred             hH-HHHHHHHHHHHh----cCCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHH
Confidence            68 999999998764    689999999999987543211111     12222 344443  455999999999999999


Q ss_pred             cCcCCCC-eEEe-ec-ccccHHHHHHHHHHHhCCCCCCCCCC
Q 043792          255 EDVSSYG-RYLC-FN-HVINCNEDAMKLARMLLPPSDTSTPP  293 (294)
Q Consensus       255 ~~~~~~~-~~~~-~~-~~~s~~~~~~~~~~~~~~~~~~~~~p  293 (294)
                      .++...+ .|.+ ++ +.+|+.|+++.+.+.+|.+.++...|
T Consensus       209 ~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~  250 (313)
T 1qyd_A          209 DDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYIS  250 (313)
T ss_dssp             TCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCCEECCBC
T ss_pred             hCcccCCceEEEeCCCCccCHHHHHHHHHHhcCCCCceEECC
Confidence            8775444 4544 33 57999999999999999887654433

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.96  E-value=9.5e-29  Score=211.12  Aligned_cols=221  Identities=13%  Similarity=0.070  Sum_probs=161.8

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC-------CChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNH-------GKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG   98 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~-------~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~   98 (294)
                      ||+|+||||||+||++|++.|+++|++|++++|+.       ++.+.+..   +  ...+++++.+|+.|++++.+++++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~---l--~~~~v~~v~~D~~d~~~l~~~~~~   76 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDN---Y--QSLGVILLEGDINDHETLVKAIKQ   76 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHH---H--HHTTCEEEECCTTCHHHHHHHHTT
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHH---H--HhCCCEEEEeCCCCHHHHHHHHhC
Confidence            57899999999999999999999999999999986       11222211   1  123789999999999999999999


Q ss_pred             CCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCC-CcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhh
Q 043792           99 CSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNT-VDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLC  177 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~  177 (294)
                      +|+|||+++...             +.++.+++++|++. + ++|||+ |+.     +..        .+|..+..+.. 
T Consensus        77 ~d~vi~~a~~~~-------------~~~~~~l~~aa~~~-g~v~~~v~-S~~-----g~~--------~~~~~~~~p~~-  127 (307)
T 2gas_A           77 VDIVICAAGRLL-------------IEDQVKIIKAIKEA-GNVKKFFP-SEF-----GLD--------VDRHDAVEPVR-  127 (307)
T ss_dssp             CSEEEECSSSSC-------------GGGHHHHHHHHHHH-CCCSEEEC-SCC-----SSC--------TTSCCCCTTHH-
T ss_pred             CCEEEECCcccc-------------cccHHHHHHHHHhc-CCceEEee-ccc-----ccC--------cccccCCCcch-
Confidence            999999998643             45678999999998 7 999983 432     211        11222222211 


Q ss_pred             hhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc----ccccc-ccccCCC--ccccccHHHHHHHH
Q 043792          178 KKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP----YLKGA-AEMYEDG--VMASVDLRFYVDAH  250 (294)
Q Consensus       178 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~----~~~~~-~~~~~~~--~~~~v~v~D~a~~i  250 (294)
                          +.| .+|..+|.+++.    .+++++++||+.++++.......    ...+. ...++++  ...|++++|+|+++
T Consensus       128 ----~~y-~sK~~~e~~~~~----~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  198 (307)
T 2gas_A          128 ----QVF-EEKASIRRVIEA----EGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFT  198 (307)
T ss_dssp             ----HHH-HHHHHHHHHHHH----HTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHH
T ss_pred             ----hHH-HHHHHHHHHHHH----cCCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHH
Confidence                568 999999988764    58999999999998865221110    11112 2334443  45599999999999


Q ss_pred             HhhhcCcCCCCe-EEe-ec-ccccHHHHHHHHHHHhCCCCCC
Q 043792          251 ICVFEDVSSYGR-YLC-FN-HVINCNEDAMKLARMLLPPSDT  289 (294)
Q Consensus       251 ~~~~~~~~~~~~-~~~-~~-~~~s~~~~~~~~~~~~~~~~~~  289 (294)
                      +.++.++...++ |.+ .+ +.+|+.|+++.+.+.+|.+.++
T Consensus       199 ~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~  240 (307)
T 2gas_A          199 IRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLEK  240 (307)
T ss_dssp             HHHHTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCEE
T ss_pred             HHHHcCccccCceEEEeCCCCcCCHHHHHHHHHHHhCCCCce
Confidence            999987655454 544 33 5799999999999999987654

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.96  E-value=1.6e-28  Score=209.82  Aligned_cols=224  Identities=13%  Similarity=0.087  Sum_probs=162.4

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCCh---hhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKL---QCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ||+|+||||||+||+++++.|+++|++|++++|+....   +.... + ......+++++.+|++|++++.++++++|+|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~-~-~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~v   81 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQL-L-ESFKASGANIVHGSIDDHASLVEAVKNVDVV   81 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHH-H-HHHHTTTCEEECCCTTCHHHHHHHHHTCSEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHH-H-HHHHhCCCEEEEeccCCHHHHHHHHcCCCEE
Confidence            57899999999999999999999999999999986432   11110 0 0001347899999999999999999999999


Q ss_pred             EecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCC-CcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhcc
Q 043792          103 FYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNT-VDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFK  181 (294)
Q Consensus       103 ih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  181 (294)
                      ||+++...             +.++.+++++|++. + ++|||+ |+.     +..        .+|..+..+..     
T Consensus        82 i~~a~~~~-------------~~~~~~l~~aa~~~-g~v~~~v~-S~~-----g~~--------~~~~~~~~p~~-----  128 (308)
T 1qyc_A           82 ISTVGSLQ-------------IESQVNIIKAIKEV-GTVKRFFP-SEF-----GND--------VDNVHAVEPAK-----  128 (308)
T ss_dssp             EECCCGGG-------------SGGGHHHHHHHHHH-CCCSEEEC-SCC-----SSC--------TTSCCCCTTHH-----
T ss_pred             EECCcchh-------------hhhHHHHHHHHHhc-CCCceEee-ccc-----ccC--------ccccccCCcch-----
Confidence            99998532             45678999999998 7 999984 542     211        12222222211     


Q ss_pred             chhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc----cccccc-cccCCC--ccccccHHHHHHHHHhhh
Q 043792          182 LWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP----YLKGAA-EMYEDG--VMASVDLRFYVDAHICVF  254 (294)
Q Consensus       182 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~----~~~~~~-~~~~~~--~~~~v~v~D~a~~i~~~~  254 (294)
                      ..| .+|..+|.+++.    .+++++++||+.++|+.......    ...+.. ..++++  ...|+|++|+|++++.++
T Consensus       129 ~~y-~sK~~~e~~~~~----~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l  203 (308)
T 1qyc_A          129 SVF-EVKAKVRRAIEA----EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAV  203 (308)
T ss_dssp             HHH-HHHHHHHHHHHH----HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTS
T ss_pred             hHH-HHHHHHHHHHHh----cCCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHH
Confidence            568 999999988764    58999999999998764221110    112222 344443  455999999999999999


Q ss_pred             cCcCCCCe-EEe-e-cccccHHHHHHHHHHHhCCCCCC
Q 043792          255 EDVSSYGR-YLC-F-NHVINCNEDAMKLARMLLPPSDT  289 (294)
Q Consensus       255 ~~~~~~~~-~~~-~-~~~~s~~~~~~~~~~~~~~~~~~  289 (294)
                      .++...++ |.+ . ++.+|+.|+++.+.+.+|.+.++
T Consensus       204 ~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~  241 (308)
T 1qyc_A          204 DDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEK  241 (308)
T ss_dssp             SCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCEE
T ss_pred             hCccccCeEEEEeCCCCccCHHHHHHHHHHHhCCCCce
Confidence            87655454 544 3 35799999999999999987654

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.96  E-value=8.9e-28  Score=202.30  Aligned_cols=234  Identities=13%  Similarity=0.024  Sum_probs=169.4

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++||||||+|+||+++++.|+++|++|++++|+....+.+..++   ....++.++.+|++|++++.++++      
T Consensus        14 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   90 (278)
T 2bgk_A           14 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNI---GSPDVISFVHCDVTKDEDVRNLVDTTIAKH   90 (278)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CCTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHh---CCCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999865544444421   122378999999999999988876      


Q ss_pred             -cCCEEEecCCCCCCC------C--cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDH------S--TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~------~--~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                       ++|+|||||+.....      .  ...+..+++|+.++.++++++.+.   .+.++||++||..++......    .  
T Consensus        91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~----~--  164 (278)
T 2bgk_A           91 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGV----S--  164 (278)
T ss_dssp             SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTS----C--
T ss_pred             CCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCC----C--
Confidence             689999999865321      1  112378999999999999987653   256799999998633211100    1  


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccc----cccCCCcc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAA----EMYEDGVM  238 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~----~~~~~~~~  238 (294)
                                      ..|+.+|.+.+.+++.++.+   .+++++++|||.++++.............    ...+....
T Consensus       165 ----------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (278)
T 2bgk_A          165 ----------------HVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKG  228 (278)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCS
T ss_pred             ----------------cchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhccccccc
Confidence                            67999999999999998876   58999999999999987432110000000    00111122


Q ss_pred             ccccHHHHHHHHHhhhcCc--CCCCe-EEeec-ccccHHHHHHHHHHH
Q 043792          239 ASVDLRFYVDAHICVFEDV--SSYGR-YLCFN-HVINCNEDAMKLARM  282 (294)
Q Consensus       239 ~~v~v~D~a~~i~~~~~~~--~~~~~-~~~~~-~~~s~~~~~~~~~~~  282 (294)
                      .+++++|+|++++.++..+  ...|+ +.+.+ ...++.|+++.+.+.
T Consensus       229 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~  276 (278)
T 2bgk_A          229 TLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHG  276 (278)
T ss_dssp             CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSC
T ss_pred             ccCCHHHHHHHHHHHcCcccccCCCCEEEECCcccccCCccchhhhhh
Confidence            3899999999999998654  23465 55554 468899999887653

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.96  E-value=1.5e-28  Score=211.05  Aligned_cols=221  Identities=13%  Similarity=0.092  Sum_probs=161.5

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC-ChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG-KLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      +++|+||||||+||+++++.|+++|++|++++|+.+ ....+..   +  ...+++++.+|+.|++++.++++++|+|||
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~---l--~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~   85 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDE---F--QSLGAIIVKGELDEHEKLVELMKKVDVVIS   85 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHH---H--HHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHH---h--hcCCCEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            458999999999999999999999999999999875 3332222   1  113789999999999999999999999999


Q ss_pred             cCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCC-CcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccch
Q 043792          105 SFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNT-VDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLW  183 (294)
Q Consensus       105 ~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  183 (294)
                      +++...             +.++.+++++|++. + +++||+ |+.     +.        ..+|..+..+..     ..
T Consensus        86 ~a~~~~-------------~~~~~~l~~aa~~~-g~v~~~v~-S~~-----g~--------~~~~~~~~~p~~-----~~  132 (318)
T 2r6j_A           86 ALAFPQ-------------ILDQFKILEAIKVA-GNIKRFLP-SDF-----GV--------EEDRINALPPFE-----AL  132 (318)
T ss_dssp             CCCGGG-------------STTHHHHHHHHHHH-CCCCEEEC-SCC-----SS--------CTTTCCCCHHHH-----HH
T ss_pred             CCchhh-------------hHHHHHHHHHHHhc-CCCCEEEe-ecc-----cc--------CcccccCCCCcc-----hh
Confidence            998532             45678999999998 7 999985 432     21        112222222211     46


Q ss_pred             hHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCC-Cccccccc-cccCCC--ccccccHHHHHHHHHhhhcCcCC
Q 043792          184 HGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTIS-NPYLKGAA-EMYEDG--VMASVDLRFYVDAHICVFEDVSS  259 (294)
Q Consensus       184 Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~-~~~~~~~~-~~~~~~--~~~~v~v~D~a~~i~~~~~~~~~  259 (294)
                      | .+|..+|.+++.    .+++++++||+.+++...... .....+.. ..++++  ...|+|++|+|++++.++.++..
T Consensus       133 y-~sK~~~e~~~~~----~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~  207 (318)
T 2r6j_A          133 I-ERKRMIRRAIEE----ANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRA  207 (318)
T ss_dssp             H-HHHHHHHHHHHH----TTCCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGG
T ss_pred             H-HHHHHHHHHHHh----cCCCeEEEEcceehhhhhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccc
Confidence            8 999999988764    689999999998876431100 00112222 334443  45599999999999999987654


Q ss_pred             CCe-EEe-e-cccccHHHHHHHHHHHhCCCCCC
Q 043792          260 YGR-YLC-F-NHVINCNEDAMKLARMLLPPSDT  289 (294)
Q Consensus       260 ~~~-~~~-~-~~~~s~~~~~~~~~~~~~~~~~~  289 (294)
                      .++ |.+ + ++.+|+.|+++.+.+.+|.+.++
T Consensus       208 ~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~  240 (318)
T 2r6j_A          208 LNRVVIYRPSTNIITQLELISRWEKKIGKKFKK  240 (318)
T ss_dssp             TTEEEECCCGGGEEEHHHHHHHHHHHHTCCCEE
T ss_pred             cCeEEEecCCCCccCHHHHHHHHHHHhCCCCce
Confidence            444 544 3 36799999999999999987654

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.96  E-value=1.4e-28  Score=211.40  Aligned_cols=223  Identities=11%  Similarity=0.018  Sum_probs=162.6

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC-CC-----hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNH-GK-----LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG   98 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~-----~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~   98 (294)
                      +||+|+||||||+||++|++.|+++|++|++++|+. +.     .+.+..   +  ...+++++.+|++|++++.+++++
T Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~---~--~~~~v~~v~~D~~d~~~l~~a~~~   77 (321)
T 3c1o_A            3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREE---F--RSMGVTIIEGEMEEHEKMVSVLKQ   77 (321)
T ss_dssp             -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHH---H--HHTTCEEEECCTTCHHHHHHHHTT
T ss_pred             cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHH---h--hcCCcEEEEecCCCHHHHHHHHcC
Confidence            367899999999999999999999999999999986 21     111211   1  124789999999999999999999


Q ss_pred             CCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCC-CcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhh
Q 043792           99 CSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNT-VDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLC  177 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~  177 (294)
                      +|+|||+++...             +.++.+++++|++. + ++|||+ |+.     +.        ..+|..+..+.  
T Consensus        78 ~d~vi~~a~~~~-------------~~~~~~l~~aa~~~-g~v~~~v~-S~~-----g~--------~~~~~~~~~p~--  127 (321)
T 3c1o_A           78 VDIVISALPFPM-------------ISSQIHIINAIKAA-GNIKRFLP-SDF-----GC--------EEDRIKPLPPF--  127 (321)
T ss_dssp             CSEEEECCCGGG-------------SGGGHHHHHHHHHH-CCCCEEEC-SCC-----SS--------CGGGCCCCHHH--
T ss_pred             CCEEEECCCccc-------------hhhHHHHHHHHHHh-CCccEEec-ccc-----cc--------CccccccCCCc--
Confidence            999999998532             45678999999998 7 999983 432     21        11222222221  


Q ss_pred             hhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCC-C---ccccccc-cccCC--CccccccHHHHHHHH
Q 043792          178 KKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTIS-N---PYLKGAA-EMYED--GVMASVDLRFYVDAH  250 (294)
Q Consensus       178 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~-~---~~~~~~~-~~~~~--~~~~~v~v~D~a~~i  250 (294)
                         .+.| .+|..+|.+++.    .+++++++||+.++++..... .   ....+.. ..+++  ....|++++|+|+++
T Consensus       128 ---~~~y-~sK~~~e~~~~~----~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (321)
T 3c1o_A          128 ---ESVL-EKKRIIRRAIEA----AALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYT  199 (321)
T ss_dssp             ---HHHH-HHHHHHHHHHHH----HTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHH
T ss_pred             ---chHH-HHHHHHHHHHHH----cCCCeEEEEeceeccccccccccccccccccCceEEecCCCcceeEeeHHHHHHHH
Confidence               1579 999999988864    589999999999887532100 0   0112222 33443  345599999999999


Q ss_pred             HhhhcCcCCCCe-EEee--cccccHHHHHHHHHHHhCCCCCCC
Q 043792          251 ICVFEDVSSYGR-YLCF--NHVINCNEDAMKLARMLLPPSDTS  290 (294)
Q Consensus       251 ~~~~~~~~~~~~-~~~~--~~~~s~~~~~~~~~~~~~~~~~~~  290 (294)
                      +.++.++...++ |.+.  ++.+|+.|+++.+.+.+|.+.++.
T Consensus       200 ~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~~~~~~  242 (321)
T 3c1o_A          200 IKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLSFKKV  242 (321)
T ss_dssp             HHHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCCEE
T ss_pred             HHHHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcCCcceee
Confidence            999987765454 5544  467999999999999999876543

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.95  E-value=7.3e-27  Score=190.17  Aligned_cols=190  Identities=11%  Similarity=0.039  Sum_probs=139.8

Q ss_pred             CCeEEEeCCCchHHHHHHHHHH-HCCCeEEEEecCCC-ChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           26 TKTVCVMDASGHFASALVRRLL-LRGYTVHAALHNHG-KLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~-~~g~~V~~~~r~~~-~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      |++|+||||+|+||+++++.|+ ++|++|++++|+++ +.+.+..      ...++.++.+|++|.+++.++++++|+||
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~~D~~d~~~~~~~~~~~d~vv   78 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEII------DHERVTVIEGSFQNPGXLEQAVTNAEVVF   78 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHH------TSTTEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhcc------CCCceEEEECCCCCHHHHHHHHcCCCEEE
Confidence            4569999999999999999999 89999999999865 4443321      23579999999999999999999999999


Q ss_pred             ecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccc-
Q 043792          104 YSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL-  182 (294)
Q Consensus       104 h~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~-  182 (294)
                      |+++..             |+. +.++++++++. ++++||++||.++  ++...    . ...+       ....... 
T Consensus        79 ~~ag~~-------------n~~-~~~~~~~~~~~-~~~~iv~iSs~~~--~~~~~----~-~~~~-------~~~~~~~~  129 (221)
T 3r6d_A           79 VGAMES-------------GSD-MASIVKALSRX-NIRRVIGVSMAGL--SGEFP----V-ALEK-------WTFDNLPI  129 (221)
T ss_dssp             ESCCCC-------------HHH-HHHHHHHHHHT-TCCEEEEEEETTT--TSCSC----H-HHHH-------HHHHTSCH
T ss_pred             EcCCCC-------------Chh-HHHHHHHHHhc-CCCeEEEEeecee--cCCCC----c-cccc-------cccccccc
Confidence            999853             344 89999999988 8899999999863  22111    0 0000       0000012 


Q ss_pred             hhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHHHHHHHHhhh--cCcC
Q 043792          183 WHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVF--EDVS  258 (294)
Q Consensus       183 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~i~~~~--~~~~  258 (294)
                      .|+.+|..+|.+++.    .+++++++||+.++++..............    ....+++.+|+|++++.++  .++.
T Consensus       130 ~y~~~K~~~e~~~~~----~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~----~~~~~~~~~dvA~~~~~l~~~~~~~  199 (221)
T 3r6d_A          130 SYVQGERQARNVLRE----SNLNYTILRLTWLYNDPEXTDYELIPEGAQ----FNDAQVSREAVVKAIFDILHAADET  199 (221)
T ss_dssp             HHHHHHHHHHHHHHH----SCSEEEEEEECEEECCTTCCCCEEECTTSC----CCCCEEEHHHHHHHHHHHHTCSCCG
T ss_pred             HHHHHHHHHHHHHHh----CCCCEEEEechhhcCCCCCcceeeccCCcc----CCCceeeHHHHHHHHHHHHHhcChh
Confidence            799999999998764    699999999999998842111101111100    1112899999999999999  6654

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.95  E-value=3.3e-27  Score=194.18  Aligned_cols=201  Identities=12%  Similarity=0.091  Sum_probs=136.9

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ++||+||||||+|+||+++++.|+++| ++|++++|++++...+        ...++.++.+|++|++++.++++++|+|
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~--------~~~~~~~~~~Dl~d~~~~~~~~~~~D~v   92 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP--------YPTNSQIIMGDVLNHAALKQAMQGQDIV   92 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS--------CCTTEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc--------ccCCcEEEEecCCCHHHHHHHhcCCCEE
Confidence            456899999999999999999999999 9999999987543322        2247999999999999999999999999


Q ss_pred             EecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccc
Q 043792          103 FYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL  182 (294)
Q Consensus       103 ih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  182 (294)
                      ||+++...       .     ...+.++++++++. ++++||++||.+++......    ..+..+..+..+.      .
T Consensus        93 v~~a~~~~-------~-----~~~~~~~~~~~~~~-~~~~iV~iSS~~~~~~~~~~----~~~~~~~~~~~~~------~  149 (236)
T 3qvo_A           93 YANLTGED-------L-----DIQANSVIAAMKAC-DVKRLIFVLSLGIYDEVPGK----FVEWNNAVIGEPL------K  149 (236)
T ss_dssp             EEECCSTT-------H-----HHHHHHHHHHHHHT-TCCEEEEECCCCC--------------------CGGG------H
T ss_pred             EEcCCCCc-------h-----hHHHHHHHHHHHHc-CCCEEEEEecceecCCCCcc----cccchhhcccchH------H
Confidence            99998632       1     13467899999998 88999999998643221111    1122333222222      3


Q ss_pred             hhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHHHHHHHHhhhcCcC-CCC
Q 043792          183 WHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVS-SYG  261 (294)
Q Consensus       183 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~i~~~~~~~~-~~~  261 (294)
                      .|.    .+|..++    +.+++++++||+.++++..........+. .    ....+++++|+|++++.++.++. ..+
T Consensus       150 ~~~----~~~~~l~----~~gi~~~~vrPg~i~~~~~~~~~~~~~~~-~----~~~~~i~~~DvA~~i~~ll~~~~~~~g  216 (236)
T 3qvo_A          150 PFR----RAADAIE----ASGLEYTILRPAWLTDEDIIDYELTSRNE-P----FKGTIVSRKSVAALITDIIDKPEKHIG  216 (236)
T ss_dssp             HHH----HHHHHHH----TSCSEEEEEEECEEECCSCCCCEEECTTS-C----CSCSEEEHHHHHHHHHHHHHSTTTTTT
T ss_pred             HHH----HHHHHHH----HCCCCEEEEeCCcccCCCCcceEEeccCC-C----CCCcEECHHHHHHHHHHHHcCcccccC
Confidence            343    4444443    57999999999999987632111011111 1    11238999999999999998876 334


Q ss_pred             e-EEeecc
Q 043792          262 R-YLCFNH  268 (294)
Q Consensus       262 ~-~~~~~~  268 (294)
                      + |.+.+.
T Consensus       217 ~~~~i~~~  224 (236)
T 3qvo_A          217 ENIGINQP  224 (236)
T ss_dssp             EEEEEECS
T ss_pred             eeEEecCC
Confidence            4 655543

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.95  E-value=6.1e-27  Score=197.27  Aligned_cols=233  Identities=12%  Similarity=0.069  Sum_probs=156.2

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhh-ccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELIN-YNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~-~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      .++++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++.. .....++.++.+|++|++++.++++     
T Consensus         4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (278)
T 1spx_A            4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   83 (278)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence            4568999999999999999999999999999999987655554442200 1123468899999999999988876     


Q ss_pred             --cCCEEEecCCCCCCC----------CcchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcce-eeeCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDH----------STYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTA-VVWNNHRDNP  161 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~----------~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~-~~~~~~~~~~  161 (294)
                        ++|+|||||+.....          ....+..+++|+.++.++++++.+.   .+ +++|++||..+ +. +...   
T Consensus        84 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~-~~~~---  158 (278)
T 1spx_A           84 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLH-ATPD---  158 (278)
T ss_dssp             HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSS-CCTT---
T ss_pred             cCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEeccccccc-CCCC---
Confidence              789999999864321          1112378999999999999987654   14 79999999853 21 1101   


Q ss_pred             CCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCC---c-c------ccc
Q 043792          162 TSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISN---P-Y------LKG  228 (294)
Q Consensus       162 ~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~---~-~------~~~  228 (294)
                       .                  ..|+.+|.+.+.+.+.++.+   +|++++++|||.++++......   . .      ...
T Consensus       159 -~------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  219 (278)
T 1spx_A          159 -F------------------PYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMAT  219 (278)
T ss_dssp             -S------------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHH
T ss_pred             -c------------------cHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHH
Confidence             1                  67999999999999998865   5899999999999988632110   0 0      000


Q ss_pred             cccccCCCccccccHHHHHHHHHhhhcCcC---CCCe-EEeec-ccccHHHHHHHHHHH
Q 043792          229 AAEMYEDGVMASVDLRFYVDAHICVFEDVS---SYGR-YLCFN-HVINCNEDAMKLARM  282 (294)
Q Consensus       229 ~~~~~~~~~~~~v~v~D~a~~i~~~~~~~~---~~~~-~~~~~-~~~s~~~~~~~~~~~  282 (294)
                      .....+.  ..+.+++|+|++++.++..+.   ..|+ +.+.+ ...++.++++.+.+.
T Consensus       220 ~~~~~p~--~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~  276 (278)
T 1spx_A          220 MKECVPA--GVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKL  276 (278)
T ss_dssp             HHHHCTT--SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC-----------
T ss_pred             HHhcCCC--cCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHH
Confidence            0000111  238899999999999987543   4566 55554 468899999888764

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.95  E-value=1.9e-26  Score=191.95  Aligned_cols=216  Identities=17%  Similarity=0.073  Sum_probs=152.7

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..+++++|||||+|+||+++++.|+++|++|++++|+.+..+.+..+     ...++.++.+|++|.+++.++++     
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   78 (257)
T 3tpc_A            4 QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAE-----LGAAVRFRNADVTNEADATAALAFAKQE   78 (257)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-----------------CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH-----hCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999988766554442     13478899999999999888876     


Q ss_pred             --cCCEEEecCCCCCCCC----------cchhhhHhHhhHHHHHHHHHHHhc--C-------CCcEEEEecCcceeeeCC
Q 043792           98 --GCSGLFYSFEPPSDHS----------TYDELTAEVETMAAHNVLEACAQT--N-------TVDKVVFTSSLTAVVWNN  156 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~----------~~~~~~~~~n~~~~~~ll~~~~~~--~-------~~~~~v~~Ss~~~~~~~~  156 (294)
                        ++|++||||+......          ...++.+++|+.++.++++++.+.  +       +..++|++||..++....
T Consensus        79 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~  158 (257)
T 3tpc_A           79 FGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQI  158 (257)
T ss_dssp             HSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT
T ss_pred             cCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCC
Confidence              6899999999764322          112378999999999999988754  1       346899999986433221


Q ss_pred             CCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-cccccccc
Q 043792          157 HRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YLKGAAEM  232 (294)
Q Consensus       157 ~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~~  232 (294)
                      ..                       ..|+.+|.+.+.+.+.++.+   +|+++++++||.|.++....... ..+.....
T Consensus       159 ~~-----------------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~  215 (257)
T 3tpc_A          159 GQ-----------------------AAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDVQDALAAS  215 (257)
T ss_dssp             TC-----------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC--------------CC
T ss_pred             CC-----------------------cchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHHHHHHHhc
Confidence            11                       78999999999999988877   68999999999998876322111 10000000


Q ss_pred             cCCCccccccHHHHHHHHHhhhcCcCCCCeEEeec
Q 043792          233 YEDGVMASVDLRFYVDAHICVFEDVSSYGRYLCFN  267 (294)
Q Consensus       233 ~~~~~~~~v~v~D~a~~i~~~~~~~~~~~~~~~~~  267 (294)
                      .+. ...+.+++|+|++++.++.....+|+.+..+
T Consensus       216 ~p~-~~r~~~~~dva~~v~~l~s~~~itG~~i~vd  249 (257)
T 3tpc_A          216 VPF-PPRLGRAEEYAALVKHICENTMLNGEVIRLD  249 (257)
T ss_dssp             SSS-SCSCBCHHHHHHHHHHHHHCTTCCSCEEEES
T ss_pred             CCC-CCCCCCHHHHHHHHHHHcccCCcCCcEEEEC
Confidence            111 0238899999999999998766677754443

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.95  E-value=1.6e-26  Score=193.23  Aligned_cols=218  Identities=19%  Similarity=0.048  Sum_probs=154.5

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCC-------CCeEEEECCCCChhHHHHHh
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEE-------KKLKVFQADPFDYHSLVNAL   96 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~-------~~v~~~~~Dl~~~~~~~~~~   96 (294)
                      .++++|+||||+|+||+++++.|+++|++|++++|+.+..+.+..++  ....       .++.++.+|++|.+++.+++
T Consensus         5 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   82 (264)
T 2pd6_A            5 LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLL--GGPGSKEGPPRGNHAAFQADVSEARAARCLL   82 (264)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC--------------CCEEEECCTTSHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH--HhcCccccccCcceEEEEecCCCHHHHHHHH
Confidence            45689999999999999999999999999999999876554443311  1111       46889999999999988887


Q ss_pred             cc-------C-CEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---CC-CcEEEEecCcceeeeCCCC
Q 043792           97 KG-------C-SGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---NT-VDKVVFTSSLTAVVWNNHR  158 (294)
Q Consensus        97 ~~-------~-d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~~-~~~~v~~Ss~~~~~~~~~~  158 (294)
                      ++       + |+|||||+......      ...+..+++|+.++.++++++.+.   .+ .++||++||..+.. +...
T Consensus        83 ~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~-~~~~  161 (264)
T 2pd6_A           83 EQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKV-GNVG  161 (264)
T ss_dssp             HHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH-CCTT
T ss_pred             HHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhcc-CCCC
Confidence            64       3 99999999754321      122378999999999999987654   13 46999999975322 2111


Q ss_pred             CCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-cccccccccC
Q 043792          159 DNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YLKGAAEMYE  234 (294)
Q Consensus       159 ~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~~~~  234 (294)
                          .                  ..|+.+|.+.+.+.+.++.+   .+++++++|||.++++....... +.+...... 
T Consensus       162 ----~------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~-  218 (264)
T 2pd6_A          162 ----Q------------------TNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMI-  218 (264)
T ss_dssp             ----B------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC----------CTGGGC-
T ss_pred             ----C------------------hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHHHHHHHHHhC-
Confidence                1                  67999999999999998877   68999999999999987432110 111000001 


Q ss_pred             CCccccccHHHHHHHHHhhhcCcC--CCCe-EEeecc
Q 043792          235 DGVMASVDLRFYVDAHICVFEDVS--SYGR-YLCFNH  268 (294)
Q Consensus       235 ~~~~~~v~v~D~a~~i~~~~~~~~--~~~~-~~~~~~  268 (294)
                       ....+++++|+|++++.++..+.  ..|+ +.+.++
T Consensus       219 -~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  254 (264)
T 2pd6_A          219 -PMGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGG  254 (264)
T ss_dssp             -TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -CCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCC
Confidence             11237899999999999987542  3565 445444

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.95  E-value=4.7e-27  Score=195.35  Aligned_cols=217  Identities=12%  Similarity=0.036  Sum_probs=157.8

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++||||||+|+||+++++.|+++|++|++++|+.+..+.+.+++  .....++.++.+|++|++++.++++      
T Consensus         9 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   86 (255)
T 1fmc_A            9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEI--QQLGGQAFACRCDITSEQELSALADFAISKL   86 (255)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHH--HHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHH--HHhCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            45689999999999999999999999999999999876555444432  1224578899999999999988876      


Q ss_pred             -cCCEEEecCCCCCCCC-----cchhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS-----TYDELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~-----~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                       ++|+|||||+......     ...+..+++|+.++.++++++.    +. +.++||++||..++.....     .    
T Consensus        87 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~~-----~----  156 (255)
T 1fmc_A           87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-GGGVILTITSMAAENKNIN-----M----  156 (255)
T ss_dssp             SSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTCCCTT-----C----
T ss_pred             CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcchhhcCCCCC-----C----
Confidence             7899999998754321     1123789999999999999875    34 5689999999863221110     1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCC-c-cccccccccCCCcccccc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISN-P-YLKGAAEMYEDGVMASVD  242 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~-~-~~~~~~~~~~~~~~~~v~  242 (294)
                                    ..|+.+|.+.|.+++.++.+.   +++++++|||.++++...... . +.+..  ........+++
T Consensus       157 --------------~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~--~~~~~~~~~~~  220 (255)
T 1fmc_A          157 --------------TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKM--LQHTPIRRLGQ  220 (255)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHH--HHTCSSCSCBC
T ss_pred             --------------cccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHH--HhcCCcccCCC
Confidence                          689999999999999988764   899999999999987521110 0 00000  00111123889


Q ss_pred             HHHHHHHHHhhhcCcC--CCCe-EEeecc
Q 043792          243 LRFYVDAHICVFEDVS--SYGR-YLCFNH  268 (294)
Q Consensus       243 v~D~a~~i~~~~~~~~--~~~~-~~~~~~  268 (294)
                      ++|+|++++.++..+.  ..|+ |++.++
T Consensus       221 ~~dva~~~~~l~~~~~~~~~G~~~~v~gg  249 (255)
T 1fmc_A          221 PQDIANAALFLCSPAASWVSGQILTVSGG  249 (255)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHHhCCccccCCCcEEEECCc
Confidence            9999999999987543  2454 666543

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.95  E-value=7.1e-26  Score=191.96  Aligned_cols=249  Identities=14%  Similarity=-0.003  Sum_probs=172.9

Q ss_pred             CCCCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc---
Q 043792           21 DSSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK---   97 (294)
Q Consensus        21 ~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---   97 (294)
                      +...++++|+||||+|+||+++++.|+++|++|++++|+.++.+.+..     ....++.++.+|++|.+++.++++   
T Consensus        11 ~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~Dl~d~~~v~~~~~~~~   85 (291)
T 3rd5_A           11 LPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAAR-----TMAGQVEVRELDLQDLSSVRRFADGVS   85 (291)
T ss_dssp             CCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT-----TSSSEEEEEECCTTCHHHHHHHHHTCC
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HhcCCeeEEEcCCCCHHHHHHHHHhcC
Confidence            345667999999999999999999999999999999998766555443     124578999999999999999987   


Q ss_pred             cCCEEEecCCCCCCC----CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCC
Q 043792           98 GCSGLFYSFEPPSDH----STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSD  173 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~----~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~  173 (294)
                      ++|+||||||.....    ....+..+++|+.++.++++++... ..+|+|++||..++......    .....+..+..
T Consensus        86 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~-~~~riv~isS~~~~~~~~~~----~~~~~~~~~~~  160 (291)
T 3rd5_A           86 GADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPR-LTDRVVTVSSMAHWPGRINL----EDLNWRSRRYS  160 (291)
T ss_dssp             CEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGG-EEEEEEEECCGGGTTCCCCS----SCTTCSSSCCC
T ss_pred             CCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHhheeEeechhhccCCCCc----ccccccccCCC
Confidence            569999999975432    1222388999999999999999988 66799999998643221111    11111222233


Q ss_pred             hhhhhhccchhHhhHHHHHHHHHHHHHhc---C--CeEEEEecCceeCCCCCCCCccccccccccCC-CccccccHHHHH
Q 043792          174 VNLCKKFKLWHGLSKTLAEKTAWALAMDR---G--ISMVSINGGLVMGPDVTISNPYLKGAAEMYED-GVMASVDLRFYV  247 (294)
Q Consensus       174 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~-~~~~~v~v~D~a  247 (294)
                      +.      ..|+.||.+.+.+.+.++.+.   +  +++++++||.|..+...........  ..... ......+++|+|
T Consensus       161 ~~------~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~A  232 (291)
T 3rd5_A          161 PW------LAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGD--ALMSAATRVVATDADFGA  232 (291)
T ss_dssp             HH------HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC----------------------CHHHHHHH
T ss_pred             Cc------chHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHHH--HHHHHHHHHHhCCHHHHH
Confidence            33      689999999999999988774   4  9999999999987663221100000  00000 111144699999


Q ss_pred             HHHHhhhcCcCCCCeEEeecc-----------------cccHHHHHHHHHHHhCCCC
Q 043792          248 DAHICVFEDVSSYGRYLCFNH-----------------VINCNEDAMKLARMLLPPS  287 (294)
Q Consensus       248 ~~i~~~~~~~~~~~~~~~~~~-----------------~~s~~~~~~~~~~~~~~~~  287 (294)
                      ++++.++..+..+|+|+..++                 .-...++++...+.++...
T Consensus       233 ~~~~~l~~~~~~~G~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~~~~  289 (291)
T 3rd5_A          233 RQTLYAASQDLPGDSFVGPRFGYLGRTQPVGRSRRAKDAGMAAALWALSEQLTKTEF  289 (291)
T ss_dssp             HHHHHHHHSCCCTTCEEEETTSSSSCEEECCCCTGGGCHHHHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHcCCCCCCceeCCcccccCccccCCCCcccCCHHHHHHHHHHHHHHHcccc
Confidence            999999988766787654321                 0124467777777666543

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.95  E-value=5.3e-26  Score=189.44  Aligned_cols=213  Identities=11%  Similarity=-0.001  Sum_probs=150.8

Q ss_pred             CCCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           22 SSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        22 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      ++.++++||||||+|+||+++++.|+++|++|++++|+.++......+  .     ++.++.+|++|++++.++++    
T Consensus        23 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~--~-----~~~~~~~Dv~~~~~v~~~~~~~~~   95 (260)
T 3gem_A           23 MTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQ--A-----GAVALYGDFSCETGIMAFIDLLKT   95 (260)
T ss_dssp             ----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHH--H-----TCEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHh--c-----CCeEEECCCCCHHHHHHHHHHHHH
Confidence            355678999999999999999999999999999999987654322221  1     58899999999998888875    


Q ss_pred             ---cCCEEEecCCCCCCCCc--ch---hhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHST--YD---ELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~~--~~---~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                         ++|++||||+.......  ..   +..+++|+.++.++++++...   .+..++|++||..+.......        
T Consensus        96 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~--------  167 (260)
T 3gem_A           96 QTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKH--------  167 (260)
T ss_dssp             HCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSC--------
T ss_pred             hcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCc--------
Confidence               57999999997543321  11   278999999999999987543   255799999998643211111        


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc--CCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHH
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR--GISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLR  244 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~  244 (294)
                                     ..|+.+|.+.+.+.+.++.+.  ++++++++||.+.++...... .........  ....+..++
T Consensus       168 ---------------~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~~-~~~~~~~~~--p~~r~~~~e  229 (260)
T 3gem_A          168 ---------------IAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDAA-YRANALAKS--ALGIEPGAE  229 (260)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC----------------C--CSCCCCCTH
T ss_pred             ---------------HhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCHH-HHHHHHhcC--CCCCCCCHH
Confidence                           689999999999999998876  499999999999877532111 111110111  111267789


Q ss_pred             HHHHHHHhhhcCcCCCCeE-Eeec
Q 043792          245 FYVDAHICVFEDVSSYGRY-LCFN  267 (294)
Q Consensus       245 D~a~~i~~~~~~~~~~~~~-~~~~  267 (294)
                      |+|++++.++.....+|+. .+.+
T Consensus       230 dva~~v~~L~~~~~itG~~i~vdG  253 (260)
T 3gem_A          230 VIYQSLRYLLDSTYVTGTTLTVNG  253 (260)
T ss_dssp             HHHHHHHHHHHCSSCCSCEEEEST
T ss_pred             HHHHHHHHHhhCCCCCCCEEEECC
Confidence            9999999999766667774 4444

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.95  E-value=2.1e-26  Score=192.75  Aligned_cols=217  Identities=13%  Similarity=0.040  Sum_probs=146.0

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHh------
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNAL------   96 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~------   96 (294)
                      ..++|+||||||+|+||+++++.|+++|++|++++|+.+..+.+..++  .....++.++.+|++|.+++.+++      
T Consensus        11 ~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   88 (266)
T 1xq1_A           11 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKW--QKKGFQVTGSVCDASLRPEREKLMQTVSSM   88 (266)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--HHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCeeEEEECCCCCHHHHHHHHHHHHHH
Confidence            345689999999999999999999999999999999876555444322  122447889999999998888777      


Q ss_pred             --ccCCEEEecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCCCC
Q 043792           97 --KGCSGLFYSFEPPSDHS----T--YDELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPTSH  164 (294)
Q Consensus        97 --~~~d~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  164 (294)
                        .++|+|||||+......    .  ..+..+++|+.++.++++++.    +. +.++||++||..++......      
T Consensus        89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~~------  161 (266)
T 1xq1_A           89 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKAS-GCGNIIFMSSIAGVVSASVG------  161 (266)
T ss_dssp             HTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SSCEEEEEC----------C------
T ss_pred             hCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEccchhccCCCCC------
Confidence              46899999998654221    1  123789999999999999884    44 66899999998643211111      


Q ss_pred             CCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCC-c-cccccccccCC-Ccc
Q 043792          165 DFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISN-P-YLKGAAEMYED-GVM  238 (294)
Q Consensus       165 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~-~-~~~~~~~~~~~-~~~  238 (294)
                                       ..|+.+|.+.+.+.+.++.+.   +++++++|||.++++...... . +..   ..... ...
T Consensus       162 -----------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~---~~~~~~~~~  221 (266)
T 1xq1_A          162 -----------------SIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKK---VVISRKPLG  221 (266)
T ss_dssp             -----------------CHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------
T ss_pred             -----------------chHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHH---HHHhcCCCC
Confidence                             679999999999999988774   899999999999998732211 0 000   01000 111


Q ss_pred             ccccHHHHHHHHHhhhcCc--CCCCe-EEeecc
Q 043792          239 ASVDLRFYVDAHICVFEDV--SSYGR-YLCFNH  268 (294)
Q Consensus       239 ~~v~v~D~a~~i~~~~~~~--~~~~~-~~~~~~  268 (294)
                      .+++++|+|++++.++..+  ...|+ +.+.++
T Consensus       222 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  254 (266)
T 1xq1_A          222 RFGEPEEVSSLVAFLCMPAASYITGQTICVDGG  254 (266)
T ss_dssp             --CCGGGGHHHHHHHTSGGGTTCCSCEEECCCC
T ss_pred             CCcCHHHHHHHHHHHcCccccCccCcEEEEcCC
Confidence            3789999999999998653  23465 444443

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.95  E-value=2.2e-26  Score=192.10  Aligned_cols=223  Identities=15%  Similarity=0.047  Sum_probs=161.4

Q ss_pred             CCCCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc---
Q 043792           21 DSSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK---   97 (294)
Q Consensus        21 ~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---   97 (294)
                      |...++|++|||||+|+||+++++.|+++|++|++++|+.++.+.+.+++.. ....++.++.+|++|++++.++++   
T Consensus         5 m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (262)
T 3pk0_A            5 MFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQ-LGSGKVIGVQTDVSDRAQCDALAGRAV   83 (262)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT-TSSSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-hCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            4456789999999999999999999999999999999987766655553311 122578999999999998888775   


Q ss_pred             ----cCCEEEecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCC
Q 043792           98 ----GCSGLFYSFEPPSDHS----T--YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSH  164 (294)
Q Consensus        98 ----~~d~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~  164 (294)
                          ++|++||||+......    .  ..++.+++|+.++.++++++.+.   .+..++|++||..+...+...    . 
T Consensus        84 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~----~-  158 (262)
T 3pk0_A           84 EEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPG----W-  158 (262)
T ss_dssp             HHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTT----C-
T ss_pred             HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCC----C-
Confidence                6899999999754321    1  11377999999999998887654   255799999997532222111    1 


Q ss_pred             CCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-cccccccccCCCcccc
Q 043792          165 DFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YLKGAAEMYEDGVMAS  240 (294)
Q Consensus       165 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~  240 (294)
                                       ..|+.+|.+.+.+.+.++.+   +|+++++++||.++++....... .........+.  ..+
T Consensus       159 -----------------~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~--~r~  219 (262)
T 3pk0_A          159 -----------------SHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSIPA--GAL  219 (262)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHHHHHHHTTSTT--SSC
T ss_pred             -----------------hhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHHHHHHHhcCCC--CCC
Confidence                             68999999999999999887   58999999999998875211110 00000011111  227


Q ss_pred             ccHHHHHHHHHhhhcCcC--CCCeE-Eeecc
Q 043792          241 VDLRFYVDAHICVFEDVS--SYGRY-LCFNH  268 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~~--~~~~~-~~~~~  268 (294)
                      .+++|+|++++.++....  .+|+. .+.++
T Consensus       220 ~~p~dva~~v~~L~s~~~~~itG~~i~vdGG  250 (262)
T 3pk0_A          220 GTPEDIGHLAAFLATKEAGYITGQAIAVDGG  250 (262)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence            889999999999986543  46664 44443

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.95  E-value=1e-25  Score=188.94  Aligned_cols=215  Identities=14%  Similarity=0.031  Sum_probs=160.8

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..+++++|||||+|+||+++++.|+++|++|++++|+.+..+.+..++     ..++.++.+|++|.+++.++++     
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (271)
T 3tzq_B            8 ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV-----GRGAVHHVVDLTNEVSVRALIDFTIDT   82 (271)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH-----CTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCCeEEEECCCCCHHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999988877665532     3578899999999999888876     


Q ss_pred             --cCCEEEecCCCCCC-CC-----c--chhhhHhHhhHHHHHHHHHH----HhcCCCcEEEEecCcceeeeCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSD-HS-----T--YDELTAEVETMAAHNVLEAC----AQTNTVDKVVFTSSLTAVVWNNHRDNPTS  163 (294)
Q Consensus        98 --~~d~Vih~a~~~~~-~~-----~--~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~  163 (294)
                        ++|++||||+.... ..     .  ..++.+++|+.++.++++++    ++. +..++|++||..++......     
T Consensus        83 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~~~~~-----  156 (271)
T 3tzq_B           83 FGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISA-GGGAIVNISSATAHAAYDMS-----  156 (271)
T ss_dssp             HSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEEEEECCGGGTSBCSSC-----
T ss_pred             cCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEECCHHHcCCCCCC-----
Confidence              68999999997632 11     1  11378999999999999998    444 56799999998643221111     


Q ss_pred             CCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCcccccccccc-C-CCcc
Q 043792          164 HDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMY-E-DGVM  238 (294)
Q Consensus       164 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~-~-~~~~  238 (294)
                                        ..|+.+|.+.+.+.+.++.+   +|+++++++||.++++.......  ......+ . ....
T Consensus       157 ------------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~  216 (271)
T 3tzq_B          157 ------------------TAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLP--QPIVDIFATHHLAG  216 (271)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---C--HHHHHHHHTTSTTS
T ss_pred             ------------------hHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCC--HHHHHHHHhcCCCC
Confidence                              78999999999999999887   68999999999999887431110  0000001 0 1112


Q ss_pred             ccccHHHHHHHHHhhhcCcC--CCCe-EEeecc
Q 043792          239 ASVDLRFYVDAHICVFEDVS--SYGR-YLCFNH  268 (294)
Q Consensus       239 ~~v~v~D~a~~i~~~~~~~~--~~~~-~~~~~~  268 (294)
                      .+.+++|+|++++.++....  .+|+ +.+.++
T Consensus       217 r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  249 (271)
T 3tzq_B          217 RIGEPHEIAELVCFLASDRAAFITGQVIAADSG  249 (271)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHhCcccCCcCCCEEEECCC
Confidence            27889999999999987543  3566 445554

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.95  E-value=2.1e-26  Score=194.20  Aligned_cols=239  Identities=15%  Similarity=0.072  Sum_probs=171.4

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhcc-CCCCeEEEECCCCChhHHHHHhc----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYN-EEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      ..++++||||||+|+||+++++.|+++|++|++++|+.+..+...+++.... ...++.++.+|++|++++.++++    
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   87 (281)
T 3svt_A            8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTA   87 (281)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999998776665554332211 12268899999999998888775    


Q ss_pred             ---cCCEEEecCCCCCCCC-----cc--hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHS-----TY--DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSH  164 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~-----~~--~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~  164 (294)
                         ++|++||||+......     ..  .++.+++|+.++.++++++.+.   .+-.+||++||..++......      
T Consensus        88 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------  161 (281)
T 3svt_A           88 WHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWF------  161 (281)
T ss_dssp             HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTC------
T ss_pred             HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCC------
Confidence               5799999999732211     11  1378999999999999987654   244599999998643221111      


Q ss_pred             CCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccc--ccc--CCCc
Q 043792          165 DFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAA--EMY--EDGV  237 (294)
Q Consensus       165 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~--~~~--~~~~  237 (294)
                                       ..|+.||.+.+.+.+.++.+.   ++++++++||.++++....   ......  ..+  ....
T Consensus       162 -----------------~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~---~~~~~~~~~~~~~~~p~  221 (281)
T 3svt_A          162 -----------------GAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAA---ITESAELSSDYAMCTPL  221 (281)
T ss_dssp             -----------------THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHH---HHTCHHHHHHHHHHCSS
T ss_pred             -----------------hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhh---cccCHHHHHHHHhcCCC
Confidence                             689999999999999988775   6999999999998775211   100000  000  0111


Q ss_pred             cccccHHHHHHHHHhhhcCcC--CCCe-EEeecc-ccc-HHHHHHHHHHHhCCCC
Q 043792          238 MASVDLRFYVDAHICVFEDVS--SYGR-YLCFNH-VIN-CNEDAMKLARMLLPPS  287 (294)
Q Consensus       238 ~~~v~v~D~a~~i~~~~~~~~--~~~~-~~~~~~-~~s-~~~~~~~~~~~~~~~~  287 (294)
                      ..+.+++|+|++++.++....  .+|+ +.+.++ ..+ ..++.+.+.+.++.+.
T Consensus       222 ~r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~  276 (281)
T 3svt_A          222 PRQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRDA  276 (281)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTTG
T ss_pred             CCCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCCcc
Confidence            227889999999999987543  3566 555443 344 6678888888887653

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.95  E-value=1.3e-26  Score=193.13  Aligned_cols=219  Identities=14%  Similarity=0.040  Sum_probs=159.2

Q ss_pred             CCCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           22 SSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        22 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      ...++|++|||||+|+||+++++.|+++|++|++++|+.+..+.+..++     ..++.++.+|++|++++.++++    
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~   78 (259)
T 4e6p_A            4 KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-----GPAAYAVQMDVTRQDSIDAAIAATVE   78 (259)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCCceEEEeeCCCHHHHHHHHHHHHH
Confidence            3456789999999999999999999999999999999876665554422     3478999999999999888876    


Q ss_pred             ---cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc----CCCcEEEEecCcceeeeCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT----NTVDKVVFTSSLTAVVWNNHRDNPTSH  164 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~  164 (294)
                         ++|+|||||+.......      ..++.+++|+.++.++++++.+.    +...++|++||..++. +...    . 
T Consensus        79 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-~~~~----~-  152 (259)
T 4e6p_A           79 HAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRR-GEAL----V-  152 (259)
T ss_dssp             HSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS-CCTT----B-
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhcc-CCCC----C-
Confidence               68999999997543321      12378899999999999987654    1146899999986422 1111    1 


Q ss_pred             CCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc----c---ccccc-ccc
Q 043792          165 DFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP----Y---LKGAA-EMY  233 (294)
Q Consensus       165 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~----~---~~~~~-~~~  233 (294)
                                       ..|+.+|.+.+.+.+.++.+.   ++++++++||.++++.......    +   ..+.. ..+
T Consensus       153 -----------------~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  215 (259)
T 4e6p_A          153 -----------------AIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLV  215 (259)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHH
T ss_pred             -----------------hHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHH
Confidence                             779999999999999998764   8999999999999886221100    0   01111 111


Q ss_pred             C--CCccccccHHHHHHHHHhhhcCcC--CCCe-EEeecc
Q 043792          234 E--DGVMASVDLRFYVDAHICVFEDVS--SYGR-YLCFNH  268 (294)
Q Consensus       234 ~--~~~~~~v~v~D~a~~i~~~~~~~~--~~~~-~~~~~~  268 (294)
                      .  .....+.+++|+|++++.++....  .+|+ +.+.++
T Consensus       216 ~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG  255 (259)
T 4e6p_A          216 GEAVPFGRMGTAEDLTGMAIFLASAESDYIVSQTYNVDGG  255 (259)
T ss_dssp             HHHSTTSSCBCTHHHHHHHHHTTSGGGTTCCSCEEEESTT
T ss_pred             hccCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECcC
Confidence            1  111238999999999999886443  3465 555543

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.95  E-value=1.3e-26  Score=191.50  Aligned_cols=214  Identities=17%  Similarity=0.090  Sum_probs=155.1

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc---cC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK---GC   99 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---~~   99 (294)
                      +.++|+||||||+|+||++++++|+++|++|++++|+.+..+.+..+      ..+++++.+|++|.+++.++++   ++
T Consensus         4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~i   77 (244)
T 1cyd_A            4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE------CPGIEPVCVDLGDWDATEKALGGIGPV   77 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH------STTCEEEECCTTCHHHHHHHHTTCCCC
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh------ccCCCcEEecCCCHHHHHHHHHHcCCC
Confidence            34578999999999999999999999999999999986554444331      1357888999999999999987   47


Q ss_pred             CEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---CC-CcEEEEecCcceeeeCCCCCCCCCCCCCCC
Q 043792          100 SGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---NT-VDKVVFTSSLTAVVWNNHRDNPTSHDFDER  169 (294)
Q Consensus       100 d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~  169 (294)
                      |+|||+|+......      ...+..+++|+.++.++++++.+.   .+ .++||++||..++.... .    .      
T Consensus        78 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-~----~------  146 (244)
T 1cyd_A           78 DLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP-N----L------  146 (244)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT-T----B------
T ss_pred             CEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCC-C----c------
Confidence            99999999654321      112378999999999999887653   13 57999999985322110 0    1      


Q ss_pred             CCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCC--Cc-cccccccccCCCccccccH
Q 043792          170 NWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTIS--NP-YLKGAAEMYEDGVMASVDL  243 (294)
Q Consensus       170 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~--~~-~~~~~~~~~~~~~~~~v~v  243 (294)
                                  ..|+.+|.+.|.+++.++.+   .+++++++||+.++++.....  .. +.+..  ........|+++
T Consensus       147 ------------~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  212 (244)
T 1cyd_A          147 ------------ITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKL--KERHPLRKFAEV  212 (244)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHH--HHHSTTSSCBCH
T ss_pred             ------------chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHH--HhcCCccCCCCH
Confidence                        67999999999999998877   589999999999998752110  00 00000  000112348999


Q ss_pred             HHHHHHHHhhhcCcC--CCCeE-Eeec
Q 043792          244 RFYVDAHICVFEDVS--SYGRY-LCFN  267 (294)
Q Consensus       244 ~D~a~~i~~~~~~~~--~~~~~-~~~~  267 (294)
                      +|+|++++.++..+.  ..|+. .+.+
T Consensus       213 ~dva~~~~~l~~~~~~~~~G~~~~v~g  239 (244)
T 1cyd_A          213 EDVVNSILFLLSDRSASTSGGGILVDA  239 (244)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSSEEEEST
T ss_pred             HHHHHHHHHHhCchhhcccCCEEEECC
Confidence            999999999997653  34554 4444

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.95  E-value=2.6e-26  Score=190.35  Aligned_cols=216  Identities=15%  Similarity=0.033  Sum_probs=155.5

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------c
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------G   98 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~   98 (294)
                      +|+|+||||+|+||++++++|+++|++|++++|+.+..+.+..++ ......++.++.+|++|++++.++++       +
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTH-WHAYADKVLRVRADVADEGDVNAAIAATMEQFGA   80 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-STTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-HHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            578999999999999999999999999999999876555544422 01123468999999999999988876       6


Q ss_pred             CCEEEecCCCCCCCC---------cchhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           99 CSGLFYSFEPPSDHS---------TYDELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~---------~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                      +|+|||||+......         ...+..+++|+.++.++++++.    +. +.+++|++||..++. +...    .  
T Consensus        81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~-~~~~----~--  152 (250)
T 2cfc_A           81 IDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQ-GAGVIVNIASVASLV-AFPG----R--  152 (250)
T ss_dssp             CCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTS-CCTT----C--
T ss_pred             CCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCEEEEECChhhcc-CCCC----c--
Confidence            899999998754322         1123788999999987777654    34 568999999986322 1111    1  


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccc--cccC-CCccc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAA--EMYE-DGVMA  239 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~--~~~~-~~~~~  239 (294)
                                      ..|+.+|.+.+.+.+.++.+.   +++++++|||.++++.....  ......  .... .....
T Consensus       153 ----------------~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~  214 (250)
T 2cfc_A          153 ----------------SAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWR--LDQPELRDQVLARIPQKE  214 (250)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHH--HTSHHHHHHHHTTCTTCS
T ss_pred             ----------------hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccc--cCCHHHHHHHHhcCCCCC
Confidence                            689999999999999988765   89999999999999873210  000000  0001 11123


Q ss_pred             cccHHHHHHHHHhhhcCcC--CCCeE-Eeecc
Q 043792          240 SVDLRFYVDAHICVFEDVS--SYGRY-LCFNH  268 (294)
Q Consensus       240 ~v~v~D~a~~i~~~~~~~~--~~~~~-~~~~~  268 (294)
                      +.+++|+|++++.++..+.  ..|+. .+.++
T Consensus       215 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  246 (250)
T 2cfc_A          215 IGTAAQVADAVMFLAGEDATYVNGAALVMDGA  246 (250)
T ss_dssp             CBCHHHHHHHHHHHHSTTCTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHcCchhhcccCCEEEECCc
Confidence            7899999999999987643  34664 44443

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.95  E-value=1.1e-25  Score=189.62  Aligned_cols=223  Identities=14%  Similarity=-0.031  Sum_probs=158.3

Q ss_pred             CCCCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC-------------CChhhHHHHHhhccCCCCeEEEECCCC
Q 043792           21 DSSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNH-------------GKLQCIEEELINYNEEKKLKVFQADPF   87 (294)
Q Consensus        21 ~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~-------------~~~~~l~~~~~~~~~~~~v~~~~~Dl~   87 (294)
                      |...+++++|||||+|+||+++++.|+++|++|++++|+.             +..+.+..+  ......++.++.+|++
T Consensus        10 ~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dv~   87 (280)
T 3pgx_A           10 AGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARL--VEDQGRKALTRVLDVR   87 (280)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHH--HHTTTCCEEEEECCTT
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHH--HHhcCCeEEEEEcCCC
Confidence            4456789999999999999999999999999999999842             222223222  2233567899999999


Q ss_pred             ChhHHHHHhc-------cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc----CCCcEEEEecCcc
Q 043792           88 DYHSLVNALK-------GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT----NTVDKVVFTSSLT  150 (294)
Q Consensus        88 ~~~~~~~~~~-------~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~v~~Ss~~  150 (294)
                      |++++.++++       ++|++||||+.......      ..++.+++|+.++.++++++...    +...++|++||..
T Consensus        88 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~  167 (280)
T 3pgx_A           88 DDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSA  167 (280)
T ss_dssp             CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchh
Confidence            9999888875       68999999997653321      11378999999999999987543    2246899999986


Q ss_pred             eeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc--c
Q 043792          151 AVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP--Y  225 (294)
Q Consensus       151 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~--~  225 (294)
                      ++.... .    .                  ..|+.+|.+.+.+.+.++.+   +|+++++++||.++++.......  .
T Consensus       168 ~~~~~~-~----~------------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~  224 (280)
T 3pgx_A          168 GLKATP-G----N------------------GHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEI  224 (280)
T ss_dssp             GTSCCT-T----B------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHH
T ss_pred             hccCCC-C----c------------------hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhh
Confidence            322111 1    1                  78999999999999998877   58999999999999887432100  0


Q ss_pred             c------cccccccCCCccccccHHHHHHHHHhhhcCcC--CCCeE-Eeecc
Q 043792          226 L------KGAAEMYEDGVMASVDLRFYVDAHICVFEDVS--SYGRY-LCFNH  268 (294)
Q Consensus       226 ~------~~~~~~~~~~~~~~v~v~D~a~~i~~~~~~~~--~~~~~-~~~~~  268 (294)
                      .      .............+.+++|+|++++.++....  .+|+. .+.++
T Consensus       225 ~~~~~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  276 (280)
T 3pgx_A          225 FARHPSFVHSFPPMPVQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKG  276 (280)
T ss_dssp             HHHCGGGGGGSCCBTTBCSSCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTT
T ss_pred             hhcCchhhhhhhhcccCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            0      00000111111238899999999999986543  45664 45444

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.95  E-value=6e-26  Score=189.18  Aligned_cols=209  Identities=15%  Similarity=0.083  Sum_probs=155.4

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++++||||||+|+||+++++.|+++|++|++++|+.+...           ..++.++.+|++|++++.++++     
T Consensus        25 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dv~d~~~v~~~~~~~~~~   93 (260)
T 3un1_A           25 RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA-----------DPDIHTVAGDISKPETADRIVREGIER   93 (260)
T ss_dssp             HTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS-----------STTEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-----------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999865421           2378999999999999888876     


Q ss_pred             --cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                        ++|++|||||.......      ..++.+++|+.++.++++++.    +. +..++|++||..+..  ...       
T Consensus        94 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~--~~~-------  163 (260)
T 3un1_A           94 FGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQ-GSGHIVSITTSLVDQ--PMV-------  163 (260)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCTTTTS--CBT-------
T ss_pred             CCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEEechhhcc--CCC-------
Confidence              68999999997653321      123788999999999999874    44 667999999975211  100       


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccccccCCCcccccc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVD  242 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~  242 (294)
                            ..+.      ..|+.+|.+.+.+.+.++.+.   |+++++++||.++++......  ........  ....+.+
T Consensus       164 ------~~~~------~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~--~~~~~~~~--p~~r~~~  227 (260)
T 3un1_A          164 ------GMPS------ALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAET--HSTLAGLH--PVGRMGE  227 (260)
T ss_dssp             ------TCCC------HHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGG--HHHHHTTS--TTSSCBC
T ss_pred             ------CCcc------HHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHH--HHHHhccC--CCCCCcC
Confidence                  0011      679999999999999999886   899999999999988732111  00000111  1122788


Q ss_pred             HHHHHHHHHhhhcCcCCCCe-EEeecc
Q 043792          243 LRFYVDAHICVFEDVSSYGR-YLCFNH  268 (294)
Q Consensus       243 v~D~a~~i~~~~~~~~~~~~-~~~~~~  268 (294)
                      ++|+|++++.+.......|+ +.+.++
T Consensus       228 ~~dva~av~~L~~~~~itG~~i~vdGG  254 (260)
T 3un1_A          228 IRDVVDAVLYLEHAGFITGEILHVDGG  254 (260)
T ss_dssp             HHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHhcccCCCCCcEEEECCC
Confidence            99999999998665556776 455443

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.95  E-value=1.5e-26  Score=197.11  Aligned_cols=234  Identities=11%  Similarity=0.009  Sum_probs=163.7

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG----   98 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~----   98 (294)
                      ..++++|+||||+|+||+++++.|+++|++|++++|+.+..+.+.+++.. ....++.++.+|++|.+++.+++++    
T Consensus        23 ~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (302)
T 1w6u_A           23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISS-QTGNKVHAIQCDVRDPDMVQNTVSELIKV  101 (302)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-HHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH-hcCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence            34568999999999999999999999999999999987655544432211 1135789999999999998888764    


Q ss_pred             ---CCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc----CCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           99 ---CSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT----NTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        99 ---~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                         +|+|||||+......      ...+..+++|+.++.++++++.+.    .+.++||++||..+.......       
T Consensus       102 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-------  174 (302)
T 1w6u_A          102 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFV-------  174 (302)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTC-------
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCc-------
Confidence               599999999654321      112378999999999998887542    245799999998533211111       


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccc---ccc-CCCcc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAA---EMY-EDGVM  238 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~---~~~-~~~~~  238 (294)
                                      ..|+.+|.+.+.+.+.++.+   +|++++++|||.++++.....  +.....   ... .....
T Consensus       175 ----------------~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~p~~  236 (302)
T 1w6u_A          175 ----------------VPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSR--LDPTGTFEKEMIGRIPCG  236 (302)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--------CCTTSHHHHHHHTTCTTS
T ss_pred             ----------------chhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhh--cccchhhHHHHHhcCCcC
Confidence                            67999999999999999877   689999999999998742111  100000   000 11112


Q ss_pred             ccccHHHHHHHHHhhhcCcC--CCCe-EEeecc-cccHHHHHHHHHHH
Q 043792          239 ASVDLRFYVDAHICVFEDVS--SYGR-YLCFNH-VINCNEDAMKLARM  282 (294)
Q Consensus       239 ~~v~v~D~a~~i~~~~~~~~--~~~~-~~~~~~-~~s~~~~~~~~~~~  282 (294)
                      .+++++|+|++++.++....  ..|+ +.+.++ .+++.++++.+.+.
T Consensus       237 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~  284 (302)
T 1w6u_A          237 RLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKV  284 (302)
T ss_dssp             SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGC
T ss_pred             CCCCHHHHHHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhh
Confidence            38899999999999987543  2565 555544 46667776655543

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.95  E-value=7e-26  Score=189.90  Aligned_cols=224  Identities=15%  Similarity=0.049  Sum_probs=146.2

Q ss_pred             CcccccccccCccCCCCCCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECC
Q 043792            6 SSGIEEEIAVDRDGYDSSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQAD   85 (294)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~D   85 (294)
                      +|+.+..-...-...|...+++++|||||+|+||+++++.|+++|++|++++|+.+..+.+..++     ..++.++.+|
T Consensus         8 ~~~~~~~~~~~~~~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D   82 (272)
T 4dyv_A            8 SSGVDLGTENLYFQSMSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI-----GDDALCVPTD   82 (272)
T ss_dssp             --------------------CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----TSCCEEEECC
T ss_pred             cccccCCcceeehhhhcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCCeEEEEec
Confidence            45555444333333444566789999999999999999999999999999999876665555432     2578999999


Q ss_pred             CCChhHHHHHhc-------cCCEEEecCCCCCCCC-----cc--hhhhHhHhhHHHHHHHHHHHhc---CC--CcEEEEe
Q 043792           86 PFDYHSLVNALK-------GCSGLFYSFEPPSDHS-----TY--DELTAEVETMAAHNVLEACAQT---NT--VDKVVFT  146 (294)
Q Consensus        86 l~~~~~~~~~~~-------~~d~Vih~a~~~~~~~-----~~--~~~~~~~n~~~~~~ll~~~~~~---~~--~~~~v~~  146 (294)
                      ++|++++.++++       ++|++|||||......     ..  .++.+++|+.++.++++++...   .+  ..+||++
T Consensus        83 v~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~i  162 (272)
T 4dyv_A           83 VTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINN  162 (272)
T ss_dssp             TTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEE
Confidence            999999888876       6899999999754311     11  1378999999999888876544   12  3699999


Q ss_pred             cCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCC
Q 043792          147 SSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISN  223 (294)
Q Consensus       147 Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~  223 (294)
                      ||..+.......                       ..|+.+|.+.+.+.+.++.+   .++++.+++||.|..+....  
T Consensus       163 sS~~~~~~~~~~-----------------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~--  217 (272)
T 4dyv_A          163 GSISATSPRPYS-----------------------APYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQK--  217 (272)
T ss_dssp             CCSSTTSCCTTC-----------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC--------
T ss_pred             CchhhcCCCCCc-----------------------hHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhh--
Confidence            998632211111                       78999999999999998876   48999999999998776321  


Q ss_pred             cccccccccc-CCCccccccHHHHHHHHHhhhcCcCCC
Q 043792          224 PYLKGAAEMY-EDGVMASVDLRFYVDAHICVFEDVSSY  260 (294)
Q Consensus       224 ~~~~~~~~~~-~~~~~~~v~v~D~a~~i~~~~~~~~~~  260 (294)
                       +..+..... ......+.+++|+|++++.++..+...
T Consensus       218 -~~~~~~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~  254 (272)
T 4dyv_A          218 -MKAGVPQADLSIKVEPVMDVAHVASAVVYMASLPLDA  254 (272)
T ss_dssp             -------------------CHHHHHHHHHHHHHSCTTS
T ss_pred             -hcccchhhhhcccccCCCCHHHHHHHHHHHhCCCCcC
Confidence             111111111 111123889999999999999876553

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.95  E-value=2.7e-27  Score=196.64  Aligned_cols=222  Identities=14%  Similarity=0.080  Sum_probs=151.9

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----cCCE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----GCSG  101 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----~~d~  101 (294)
                      ||+||||||+|+||+++++.|+++|++|++++|+.++.+             .  .+.+|++|.+++.++++    ++|+
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------------~--~~~~D~~~~~~~~~~~~~~~~~~d~   65 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE-------------A--DLSTPGGRETAVAAVLDRCGGVLDG   65 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-------------C--CTTSHHHHHHHHHHHHHHHTTCCSE
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc-------------c--cccCCcccHHHHHHHHHHcCCCccE
Confidence            468999999999999999999999999999999865421             0  15679999988988886    7999


Q ss_pred             EEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCCC-------CCC
Q 043792          102 LFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE-------RNW  171 (294)
Q Consensus       102 Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e-------~~~  171 (294)
                      |||||+..... ...+..+++|+.++.++++++.+.   .+.++||++||..++... ..    ..+..|       +.+
T Consensus        66 vi~~Ag~~~~~-~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-~~----~~~~~~~~~~~~~~~~  139 (255)
T 2dkn_A           66 LVCCAGVGVTA-ANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPG-AA----ELPMVEAMLAGDEARA  139 (255)
T ss_dssp             EEECCCCCTTS-SCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTT-GG----GCHHHHHHHHTCHHHH
T ss_pred             EEECCCCCCcc-hhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccccccc-cc----ccchhhhhcccchhhh
Confidence            99999976522 234588999999999999987654   256899999998643211 11    001111       000


Q ss_pred             CChh-hhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCC-Cccccccc-cccCCCccccccHHH
Q 043792          172 SDVN-LCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTIS-NPYLKGAA-EMYEDGVMASVDLRF  245 (294)
Q Consensus       172 ~~~~-~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~-~~~~~~~~-~~~~~~~~~~v~v~D  245 (294)
                      .... ....+.+.|+.+|.+.|.+++.++.+   .+++++++||+.++|+..... .....+.. ..+......+++++|
T Consensus       140 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  219 (255)
T 2dkn_A          140 IELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPLGRGSEPRE  219 (255)
T ss_dssp             HHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTTHHHHHSCCCTTSSCBCHHH
T ss_pred             hhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhhHHHHHHHHHHhcCCCCHHH
Confidence            0000 00012278999999999999998876   589999999999998862110 00011111 111002224899999


Q ss_pred             HHHHHHhhhcCc--CCCCe-EEeecc
Q 043792          246 YVDAHICVFEDV--SSYGR-YLCFNH  268 (294)
Q Consensus       246 ~a~~i~~~~~~~--~~~~~-~~~~~~  268 (294)
                      +|++++.++..+  ...|+ |++.++
T Consensus       220 va~~~~~l~~~~~~~~~G~~~~v~gg  245 (255)
T 2dkn_A          220 VAEAIAFLLGPQASFIHGSVLFVDGG  245 (255)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHhCCCcccceeeEEEecCC
Confidence            999999999865  34465 566554

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.95  E-value=4.8e-27  Score=189.24  Aligned_cols=190  Identities=14%  Similarity=0.020  Sum_probs=147.7

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc---cCCEEE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK---GCSGLF  103 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---~~d~Vi  103 (294)
                      |+|+||||+|+||++++++|+++  +|++++|++++.+.+.+++      .. .++.+|++|++++.++++   ++|+||
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~------~~-~~~~~D~~~~~~~~~~~~~~~~id~vi   71 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREV------GA-RALPADLADELEAKALLEEAGPLDLLV   71 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHH------TC-EECCCCTTSHHHHHHHHHHHCSEEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhc------cC-cEEEeeCCCHHHHHHHHHhcCCCCEEE
Confidence            58999999999999999999999  9999999876555554421      12 888999999999999988   899999


Q ss_pred             ecCCCCCCC------CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhh
Q 043792          104 YSFEPPSDH------STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLC  177 (294)
Q Consensus       104 h~a~~~~~~------~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~  177 (294)
                      |+|+.....      ....+..+++|+.++.++++++.+. +.++||++||..++. +...    .              
T Consensus        72 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~sS~~~~~-~~~~----~--------------  131 (207)
T 2yut_A           72 HAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQ-KGARAVFFGAYPRYV-QVPG----F--------------  131 (207)
T ss_dssp             ECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEE-EEEEEEEECCCHHHH-SSTT----B--------------
T ss_pred             ECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhc-CCcEEEEEcChhhcc-CCCC----c--------------
Confidence            999875432      1223478999999999999999666 678999999986432 1111    1              


Q ss_pred             hhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHHHHHHHHhhh
Q 043792          178 KKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVF  254 (294)
Q Consensus       178 ~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~i~~~~  254 (294)
                          ..|+.+|.+.|.+++.++.+   ++++++++||+.++++...       +..    .....+++++|+|++++.++
T Consensus       132 ----~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~-------~~~----~~~~~~~~~~dva~~~~~~~  196 (207)
T 2yut_A          132 ----AAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWA-------PLG----GPPKGALSPEEAARKVLEGL  196 (207)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGG-------GGT----SCCTTCBCHHHHHHHHHHHH
T ss_pred             ----chHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCcc-------ccC----CCCCCCCCHHHHHHHHHHHH
Confidence                78999999999999998877   5899999999999887511       110    11134999999999999999


Q ss_pred             cCcCCC
Q 043792          255 EDVSSY  260 (294)
Q Consensus       255 ~~~~~~  260 (294)
                      .++..+
T Consensus       197 ~~~~~~  202 (207)
T 2yut_A          197 FREPVP  202 (207)
T ss_dssp             C--CCC
T ss_pred             hCCCCc
Confidence            876543

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.94  E-value=1.5e-25  Score=186.89  Aligned_cols=210  Identities=14%  Similarity=0.086  Sum_probs=154.1

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++||||||+|+||+++++.|+++|++|++++|+.++.+.+..++     ..++.++.+|++|++++.++++      
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~   79 (260)
T 1nff_A            5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-----ADAARYVHLDVTQPAQWKAAVDTAVTAF   79 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----hcCceEEEecCCCHHHHHHHHHHHHHHc
Confidence            45689999999999999999999999999999999876555544421     1258899999999999988886      


Q ss_pred             -cCCEEEecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS----T--YDELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                       ++|+|||||+......    .  ..++.+++|+.++.++++++.    +. +.+++|++||..++. +...    .   
T Consensus        80 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~-~~~~----~---  150 (260)
T 1nff_A           80 GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA-GRGSIINISSIEGLA-GTVA----C---  150 (260)
T ss_dssp             SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTS-CCTT----B---
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEEeehhhcC-CCCC----c---
Confidence             7899999998754321    1  123789999999977666553    44 568999999986322 1111    1   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccH
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDL  243 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v  243 (294)
                                     ..|+.+|.+.+.+.+.++.+   +|++++++|||.++++.....    ...  ........+.++
T Consensus       151 ---------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----~~~--~~~~~~~~~~~~  209 (260)
T 1nff_A          151 ---------------HGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWV----PED--IFQTALGRAAEP  209 (260)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTS----CTT--CSCCSSSSCBCH
T ss_pred             ---------------hhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccccc----hhh--HHhCccCCCCCH
Confidence                           67999999999999998876   589999999999998863210    000  001111237899


Q ss_pred             HHHHHHHHhhhcCcC--CCCe-EEeecc
Q 043792          244 RFYVDAHICVFEDVS--SYGR-YLCFNH  268 (294)
Q Consensus       244 ~D~a~~i~~~~~~~~--~~~~-~~~~~~  268 (294)
                      +|+|++++.++....  ..|+ +.+.++
T Consensus       210 ~dvA~~v~~l~s~~~~~~~G~~~~v~gG  237 (260)
T 1nff_A          210 VEVSNLVVYLASDESSYSTGAEFVVDGG  237 (260)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHhCccccCCcCCEEEECCC
Confidence            999999999986543  3465 455443

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.94  E-value=1e-26  Score=193.58  Aligned_cols=219  Identities=10%  Similarity=-0.008  Sum_probs=157.5

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecC-CCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHN-HGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      .++|+||||||+|+||++++++|+++|++|++++|+ .+..+.+..++  .....++.++.+|++|++++.++++     
T Consensus         5 l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (258)
T 3afn_B            5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASM--RADGGDAAFFAADLATSEACQQLVDEFVAK   82 (258)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHH--HHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHH--HhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            356899999999999999999999999999999998 66666554432  1224578999999999999988886     


Q ss_pred             --cCCEEEecCCC-CCCCC----c--chhhhHhHhhHHHHHHHHHHHhc---CC--C---cEEEEecCcceeeeCCCCCC
Q 043792           98 --GCSGLFYSFEP-PSDHS----T--YDELTAEVETMAAHNVLEACAQT---NT--V---DKVVFTSSLTAVVWNNHRDN  160 (294)
Q Consensus        98 --~~d~Vih~a~~-~~~~~----~--~~~~~~~~n~~~~~~ll~~~~~~---~~--~---~~~v~~Ss~~~~~~~~~~~~  160 (294)
                        ++|+|||||+. .....    .  ..+..+++|+.++.++++++.+.   .+  .   .++|++||..+...+...  
T Consensus        83 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--  160 (258)
T 3afn_B           83 FGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPG--  160 (258)
T ss_dssp             HSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTT--
T ss_pred             cCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCC--
Confidence              78999999986 32211    1  12368899999999998876532   02  2   689999997532211111  


Q ss_pred             CCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc-ccccccccc-CC
Q 043792          161 PTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP-YLKGAAEMY-ED  235 (294)
Q Consensus       161 ~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~~~-~~  235 (294)
                        .                  ..|+.+|.+.+.+.+.++.+.   +++++++|||.++++....... +.+   ... ..
T Consensus       161 --~------------------~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~---~~~~~~  217 (258)
T 3afn_B          161 --A------------------GLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRD---RISNGI  217 (258)
T ss_dssp             --C------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHHHHH---HHHTTC
T ss_pred             --c------------------hHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHHHHH---HHhccC
Confidence              1                  689999999999999988764   8999999999999886322110 000   000 11


Q ss_pred             CccccccHHHHHHHHHhhhcCcC---CCCe-EEeeccc
Q 043792          236 GVMASVDLRFYVDAHICVFEDVS---SYGR-YLCFNHV  269 (294)
Q Consensus       236 ~~~~~v~v~D~a~~i~~~~~~~~---~~~~-~~~~~~~  269 (294)
                      ....+++++|+|++++.++..+.   ..|+ |.+.++.
T Consensus       218 ~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          218 PMGRFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             TTCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred             CCCcCCCHHHHHHHHHHHhCcchhccccCCEEeECCCc
Confidence            11238999999999999987542   3565 5565543

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.94  E-value=8.8e-26  Score=191.20  Aligned_cols=221  Identities=16%  Similarity=0.079  Sum_probs=160.6

Q ss_pred             CCCCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc---
Q 043792           21 DSSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK---   97 (294)
Q Consensus        21 ~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---   97 (294)
                      |...++|+||||||+|+||+++++.|+++|++|++++|+.+..+.+.+++.. ....++.++.+|++|.+++.++++   
T Consensus        36 m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~Dv~d~~~v~~~~~~~~  114 (293)
T 3rih_A           36 MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGE-LGAGNVIGVRLDVSDPGSCADAARTVV  114 (293)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTT-SSSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-hCCCcEEEEEEeCCCHHHHHHHHHHHH
Confidence            4456778999999999999999999999999999999998777666654311 112578999999999998877765   


Q ss_pred             ----cCCEEEecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCCC
Q 043792           98 ----GCSGLFYSFEPPSDHS----T--YDELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPTS  163 (294)
Q Consensus        98 ----~~d~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~  163 (294)
                          ++|++||||+......    .  ..++.+++|+.++.++++++.    +. +..++|++||..+...+...    .
T Consensus       115 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iV~isS~~~~~~~~~~----~  189 (293)
T 3rih_A          115 DAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTAS-GRGRVILTSSITGPVTGYPG----W  189 (293)
T ss_dssp             HHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH-SSCEEEEECCSBTTTBBCTT----C
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEeChhhccCCCCC----C
Confidence                5799999999754322    1  123789999999999999874    44 56799999997642222211    1


Q ss_pred             CCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-cccccccccCCCccc
Q 043792          164 HDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YLKGAAEMYEDGVMA  239 (294)
Q Consensus       164 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~~~~~~~~~  239 (294)
                                        ..|+.+|.+.+.+.+.++.+   +|+++++++||.|+++....... ..+......+.  ..
T Consensus       190 ------------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~--~r  249 (293)
T 3rih_A          190 ------------------SHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPM--GM  249 (293)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHHHHHHHHTTSTT--SS
T ss_pred             ------------------HHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHHHHHHHHhcCCC--CC
Confidence                              78999999999999998877   48999999999998875211110 10000011111  12


Q ss_pred             cccHHHHHHHHHhhhcCc--CCCCeE-Eeec
Q 043792          240 SVDLRFYVDAHICVFEDV--SSYGRY-LCFN  267 (294)
Q Consensus       240 ~v~v~D~a~~i~~~~~~~--~~~~~~-~~~~  267 (294)
                      +..++|+|++++.++...  ..+|+. .+.+
T Consensus       250 ~~~p~dvA~~v~fL~s~~a~~itG~~i~vdG  280 (293)
T 3rih_A          250 LGSPVDIGHLAAFLATDEAGYITGQAIVVDG  280 (293)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence            778999999999998654  345664 4444

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.94  E-value=2.1e-25  Score=186.50  Aligned_cols=216  Identities=17%  Similarity=0.031  Sum_probs=158.2

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++++|+||||+|+||+++++.|+++|++|++++|+.+..+.+.+++     ..++.++.+|++|++++.++++     
T Consensus         9 ~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (265)
T 2o23_A            9 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFAPADVTSEKDVQTALALAKGK   83 (265)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999987776655532     3478999999999999988876     


Q ss_pred             --cCCEEEecCCCCCCCC----------c--chhhhHhHhhHHHHHHHHHHHhc---C------CCcEEEEecCcceeee
Q 043792           98 --GCSGLFYSFEPPSDHS----------T--YDELTAEVETMAAHNVLEACAQT---N------TVDKVVFTSSLTAVVW  154 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~----------~--~~~~~~~~n~~~~~~ll~~~~~~---~------~~~~~v~~Ss~~~~~~  154 (294)
                        ++|+|||||+......          .  ..+..+++|+.++.++++++.+.   .      +..+||++||..++..
T Consensus        84 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~  163 (265)
T 2o23_A           84 FGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG  163 (265)
T ss_dssp             HSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC
T ss_pred             CCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCC
Confidence              7899999998754321          1  12378999999999999988754   1      4578999999864321


Q ss_pred             CCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-cccccc
Q 043792          155 NNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YLKGAA  230 (294)
Q Consensus       155 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~~~~~  230 (294)
                      ....                       ..|+.+|.+.+.+.+.++.+   .++++++++||.+.++....... ......
T Consensus       164 ~~~~-----------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~  220 (265)
T 2o23_A          164 QVGQ-----------------------AAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLA  220 (265)
T ss_dssp             CTTC-----------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHH
T ss_pred             CCCC-----------------------chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHHHHHHHH
Confidence            1111                       68999999999999888766   48999999999998876321110 000000


Q ss_pred             cccCCCccccccHHHHHHHHHhhhcCcCCCCeE-Eeec
Q 043792          231 EMYEDGVMASVDLRFYVDAHICVFEDVSSYGRY-LCFN  267 (294)
Q Consensus       231 ~~~~~~~~~~v~v~D~a~~i~~~~~~~~~~~~~-~~~~  267 (294)
                      ...+. ...+++++|+|++++.++......|+. .+.+
T Consensus       221 ~~~~~-~~~~~~~~dva~~~~~l~~~~~~~G~~i~vdg  257 (265)
T 2o23_A          221 SQVPF-PSRLGDPAEYAHLVQAIIENPFLNGEVIRLDG  257 (265)
T ss_dssp             HTCSS-SCSCBCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             HcCCC-cCCCCCHHHHHHHHHHHhhcCccCceEEEECC
Confidence            01111 023789999999999999776667764 4444

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.94  E-value=9.1e-26  Score=186.42  Aligned_cols=215  Identities=17%  Similarity=0.073  Sum_probs=155.7

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc---cC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK---GC   99 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---~~   99 (294)
                      ..++++|+||||+|+||+++++.|+++|++|++++|+.++.+.+..+      ..+++++.+|++|.+++.++++   ++
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~i   77 (244)
T 3d3w_A            4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE------CPGIEPVCVDLGDWEATERALGSVGPV   77 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH------STTCEEEECCTTCHHHHHHHHTTCCCC
T ss_pred             ccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH------cCCCCEEEEeCCCHHHHHHHHHHcCCC
Confidence            45578999999999999999999999999999999986554444331      1256788999999999999986   47


Q ss_pred             CEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---CC-CcEEEEecCcceeeeCCCCCCCCCCCCCCC
Q 043792          100 SGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---NT-VDKVVFTSSLTAVVWNNHRDNPTSHDFDER  169 (294)
Q Consensus       100 d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~  169 (294)
                      |+|||+|+......      ...+..+++|+.++.++++++.+.   .+ .++||++||..+..... .           
T Consensus        78 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-~-----------  145 (244)
T 3d3w_A           78 DLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVT-N-----------  145 (244)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT-T-----------
T ss_pred             CEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCC-C-----------
Confidence            99999998754321      112378999999999998887653   13 57999999975321110 0           


Q ss_pred             CCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccc--ccc-CCCccccccH
Q 043792          170 NWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAA--EMY-EDGVMASVDL  243 (294)
Q Consensus       170 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~--~~~-~~~~~~~v~v  243 (294)
                           .      ..|+.+|.+.|.+++.++.+   .+++++++|||.++++.....  ......  ... ......++++
T Consensus       146 -----~------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  212 (244)
T 3d3w_A          146 -----H------SVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQAT--WSDPHKAKTMLNRIPLGKFAEV  212 (244)
T ss_dssp             -----B------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHH--SCSTTHHHHHHHTCTTCSCBCH
T ss_pred             -----C------chHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhh--ccChHHHHHHHhhCCCCCCcCH
Confidence                 1      68999999999999998876   489999999999998762210  000000  000 1111238999


Q ss_pred             HHHHHHHHhhhcCcC--CCCe-EEeecc
Q 043792          244 RFYVDAHICVFEDVS--SYGR-YLCFNH  268 (294)
Q Consensus       244 ~D~a~~i~~~~~~~~--~~~~-~~~~~~  268 (294)
                      +|+|++++.++....  ..|+ |.+.++
T Consensus       213 ~dva~~~~~l~~~~~~~~~G~~~~v~gG  240 (244)
T 3d3w_A          213 EHVVNAILFLLSDRSGMTTGSTLPVEGG  240 (244)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHcCccccCCCCCEEEECCC
Confidence            999999999997542  3565 555543

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.94  E-value=6.5e-26  Score=189.03  Aligned_cols=220  Identities=14%  Similarity=0.008  Sum_probs=157.5

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++||||||+|+||+++++.|+++|++|++++|+.+..+.+.+++  .....++.++.+|++|.+++.++++      
T Consensus        11 l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (260)
T 3awd_A           11 LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDL--RMEGHDVSSVVMDVTNTESVQNAVRSVHEQE   88 (260)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--HHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            45689999999999999999999999999999999876554444322  1224578999999999999888875      


Q ss_pred             -cCCEEEecCCCCC-CC----Ccc--hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPS-DH----STY--DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 -~~d~Vih~a~~~~-~~----~~~--~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                       ++|+|||||+... ..    ...  ..+.+++|+.++.++++++.+.   .+.+++|++||..+... . .        
T Consensus        89 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~-~--------  158 (260)
T 3awd_A           89 GRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIV-N-R--------  158 (260)
T ss_dssp             SCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-C-S--------
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhccc-C-C--------
Confidence             6899999998654 11    111  1378999999999999887642   15679999999753211 0 0        


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccc--ccc-CCCcccc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAA--EMY-EDGVMAS  240 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~--~~~-~~~~~~~  240 (294)
                           ..+.      ..|+.+|.+.|.+++.++.+   ++++++++|||.++++....  .......  ... ......+
T Consensus       159 -----~~~~------~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~  225 (260)
T 3awd_A          159 -----PQQQ------AAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRF--GMEKPELYDAWIAGTPMGRV  225 (260)
T ss_dssp             -----SSCC------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHH--HHTCHHHHHHHHHTCTTSSC
T ss_pred             -----CCCc------cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhc--ccCChHHHHHHHhcCCcCCC
Confidence                 0011      67999999999999998877   68999999999999987320  0100000  000 1111238


Q ss_pred             ccHHHHHHHHHhhhcCc--CCCCe-EEeecc
Q 043792          241 VDLRFYVDAHICVFEDV--SSYGR-YLCFNH  268 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~--~~~~~-~~~~~~  268 (294)
                      ++++|+|++++.++...  ...|+ +.+.++
T Consensus       226 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  256 (260)
T 3awd_A          226 GQPDEVASVVQFLASDAASLMTGAIVNVDAG  256 (260)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCHHHHHHHHHHHhCchhccCCCcEEEECCc
Confidence            89999999999998653  23565 555544

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.94  E-value=3.8e-25  Score=184.09  Aligned_cols=219  Identities=11%  Similarity=-0.031  Sum_probs=157.8

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++|++|||||+|+||+++++.|+++|++|++++|+.++.+.+..+  ......++.++.+|++|++++.++++      
T Consensus         4 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (257)
T 3imf_A            4 MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLE--IEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF   81 (257)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH--HCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH--HHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999999999988776666553  22344578999999999998888775      


Q ss_pred             -cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHh----cCCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQ----TNTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                       ++|++||||+.......      ..+..+++|+.++.++++++.+    .++..++|++||..+.......        
T Consensus        82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  153 (257)
T 3imf_A           82 GRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGV--------  153 (257)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTC--------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCc--------
Confidence             57999999996543221      1137899999999999998743    2245799999998643221111        


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh----cCCeEEEEecCceeCCCCCCCCccccccc-cccC-CCcccc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD----RGISMVSINGGLVMGPDVTISNPYLKGAA-EMYE-DGVMAS  240 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~ilrp~~i~G~~~~~~~~~~~~~~-~~~~-~~~~~~  240 (294)
                                     ..|+.+|.+.+.+.+.++.+    +|+++++++||.+.++............. .... .....+
T Consensus       154 ---------------~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~  218 (257)
T 3imf_A          154 ---------------IHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRL  218 (257)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSC
T ss_pred             ---------------HHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCC
Confidence                           67999999999999888754    48999999999999886322110000000 0111 111228


Q ss_pred             ccHHHHHHHHHhhhcCcC--CCCeE-Eeec
Q 043792          241 VDLRFYVDAHICVFEDVS--SYGRY-LCFN  267 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~~--~~~~~-~~~~  267 (294)
                      .+++|+|++++.++....  .+|+. .+.+
T Consensus       219 ~~pedvA~~v~~L~s~~~~~itG~~i~vdG  248 (257)
T 3imf_A          219 GTPEEIAGLAYYLCSDEAAYINGTCMTMDG  248 (257)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cCHHHHHHHHHHHcCchhcCccCCEEEECC
Confidence            899999999999987543  35664 4444

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.94  E-value=2.1e-25  Score=188.04  Aligned_cols=222  Identities=14%  Similarity=0.108  Sum_probs=154.5

Q ss_pred             CCCCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC-CChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--
Q 043792           21 DSSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNH-GKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--   97 (294)
Q Consensus        21 ~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--   97 (294)
                      +.+.+++++|||||+|+||+++++.|+++|++|++++|+. +..+.+.+++. .....++.++.+|++|.+++.++++  
T Consensus        20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~Dv~d~~~v~~~~~~~   98 (281)
T 3v2h_A           20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVA-GLSSGTVLHHPADMTKPSEIADMMAMV   98 (281)
T ss_dssp             --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHH-TTCSSCEEEECCCTTCHHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHh-hccCCcEEEEeCCCCCHHHHHHHHHHH
Confidence            3456678999999999999999999999999999999843 33444444221 1124578999999999999888876  


Q ss_pred             -----cCCEEEecCCCCCCCCc----c--hhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCC
Q 043792           98 -----GCSGLFYSFEPPSDHST----Y--DELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPT  162 (294)
Q Consensus        98 -----~~d~Vih~a~~~~~~~~----~--~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~  162 (294)
                           ++|++|||||.......    .  .++.+++|+.++.++++++.    +. +..++|++||..++......    
T Consensus        99 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~----  173 (281)
T 3v2h_A           99 ADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKK-GWGRIINIASAHGLVASPFK----  173 (281)
T ss_dssp             HHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCTTC----
T ss_pred             HHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEECCcccccCCCCc----
Confidence                 68999999997554321    1  13789999999999999874    34 55799999998643211111    


Q ss_pred             CCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc-c--ccc----cc--
Q 043792          163 SHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP-Y--LKG----AA--  230 (294)
Q Consensus       163 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~-~--~~~----~~--  230 (294)
                                         ..|+.+|.+.+.+.+.++.+.   |+++.+++||.+.++....... .  ..+    ..  
T Consensus       174 -------------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  234 (281)
T 3v2h_A          174 -------------------SAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVIN  234 (281)
T ss_dssp             -------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----------------------
T ss_pred             -------------------hHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHH
Confidence                               689999999999999988774   8999999999999886322110 0  000    00  


Q ss_pred             cccCC--CccccccHHHHHHHHHhhhcCcC--CCCeEEeec
Q 043792          231 EMYED--GVMASVDLRFYVDAHICVFEDVS--SYGRYLCFN  267 (294)
Q Consensus       231 ~~~~~--~~~~~v~v~D~a~~i~~~~~~~~--~~~~~~~~~  267 (294)
                      ..+.+  ....+++++|+|++++.++....  .+|+.+..+
T Consensus       235 ~~~~~~~p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vd  275 (281)
T 3v2h_A          235 EVMLKGQPTKKFITVEQVASLALYLAGDDAAQITGTHVSMD  275 (281)
T ss_dssp             -----CCTTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEES
T ss_pred             HHHHhcCCCCCccCHHHHHHHHHHHcCCCcCCCCCcEEEEC
Confidence            01111  11238999999999999987643  356654433

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.94  E-value=8.4e-26  Score=187.39  Aligned_cols=216  Identities=12%  Similarity=0.011  Sum_probs=153.4

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++|+||||+|+||+++++.|+++|++|++++|+.+..+.+..++   ....++.++.+|++|++++.++++      
T Consensus         4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (251)
T 1zk4_A            4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSV---GTPDQIQFFQHDSSDEDGWTKLFDATEKAF   80 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CCTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---hccCceEEEECCCCCHHHHHHHHHHHHHHh
Confidence            45689999999999999999999999999999999876555444421   112578999999999998888876      


Q ss_pred             -cCCEEEecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHHH----hcCCC-cEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS----T--YDELTAEVETMAAHNVLEACA----QTNTV-DKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~~----~~~~~-~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                       ++|+|||||+......    .  ..++.+++|+.++.++.+++.    +. +. ++||++||..++.....     .  
T Consensus        81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~~~~iv~isS~~~~~~~~~-----~--  152 (251)
T 1zk4_A           81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNK-GLGASIINMSSIEGFVGDPS-----L--  152 (251)
T ss_dssp             SSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-SSCEEEEEECCGGGTSCCTT-----C--
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-CCCCEEEEeCCchhccCCCC-----C--
Confidence             3899999998754321    1  123789999998887776654    34 55 79999999863221111     1  


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHH-----hcCCeEEEEecCceeCCCCCCCCc-cccccccccC-CCcc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAM-----DRGISMVSINGGLVMGPDVTISNP-YLKGAAEMYE-DGVM  238 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~-----~~~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~~~~-~~~~  238 (294)
                                      ..|+.+|.+.+.+.+.++.     ..+++++++|||.++++....... ....  .... ....
T Consensus       153 ----------------~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~--~~~~~~~~~  214 (251)
T 1zk4_A          153 ----------------GAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAM--SQRTKTPMG  214 (251)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHH--TSTTTCTTS
T ss_pred             ----------------ccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchhhhH--HHhhcCCCC
Confidence                            6899999999999988775     357999999999999875221110 0000  0000 1112


Q ss_pred             ccccHHHHHHHHHhhhcCcC--CCCe-EEeecc
Q 043792          239 ASVDLRFYVDAHICVFEDVS--SYGR-YLCFNH  268 (294)
Q Consensus       239 ~~v~v~D~a~~i~~~~~~~~--~~~~-~~~~~~  268 (294)
                      .+++++|+|++++.++....  ..|+ +.+.++
T Consensus       215 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  247 (251)
T 1zk4_A          215 HIGEPNDIAYICVYLASNESKFATGSEFVVDGG  247 (251)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHcCcccccccCcEEEECCC
Confidence            38899999999999987543  3566 444443

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.94  E-value=8.8e-26  Score=187.12  Aligned_cols=216  Identities=15%  Similarity=0.062  Sum_probs=153.5

Q ss_pred             CCCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc---c
Q 043792           22 SSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK---G   98 (294)
Q Consensus        22 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---~   98 (294)
                      ...++++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++     ..++.++.+|+++.+++.++++   +
T Consensus        10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~   84 (249)
T 3f9i_A           10 IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-----KDNYTIEVCNLANKEECSNLISKTSN   84 (249)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CSSEEEEECCTTSHHHHHHHHHTCSC
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----ccCccEEEcCCCCHHHHHHHHHhcCC
Confidence            3556899999999999999999999999999999999876666555422     2478999999999999998887   5


Q ss_pred             CCEEEecCCCCCCC------CcchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCCCC
Q 043792           99 CSGLFYSFEPPSDH------STYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDER  169 (294)
Q Consensus        99 ~d~Vih~a~~~~~~------~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~  169 (294)
                      +|+|||||+.....      ....+..+++|+.++.++++++...   .+..+||++||..++......           
T Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------  153 (249)
T 3f9i_A           85 LDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQ-----------  153 (249)
T ss_dssp             CSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCS-----------
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCC-----------
Confidence            89999999875422      2223488999999999998887532   155799999998643221111           


Q ss_pred             CCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCcccccccccc--CCCccccccHH
Q 043792          170 NWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMY--EDGVMASVDLR  244 (294)
Q Consensus       170 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~--~~~~~~~v~v~  244 (294)
                                  ..|+.+|.+.+.+.+.++.+   .++++++++||.+.++......   ......+  ......+.+++
T Consensus       154 ------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~  218 (249)
T 3f9i_A          154 ------------ANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLN---EKQREAIVQKIPLGTYGIPE  218 (249)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CC---HHHHHHHHHHCTTCSCBCHH
T ss_pred             ------------chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccC---HHHHHHHHhcCCCCCCcCHH
Confidence                        77999999999999988876   4899999999999877632211   1000000  11112388899


Q ss_pred             HHHHHHHhhhcCcC--CCCeE-Eeecc
Q 043792          245 FYVDAHICVFEDVS--SYGRY-LCFNH  268 (294)
Q Consensus       245 D~a~~i~~~~~~~~--~~~~~-~~~~~  268 (294)
                      |+|++++.++..+.  ..|+. .+.++
T Consensus       219 dva~~~~~l~s~~~~~~tG~~~~vdgG  245 (249)
T 3f9i_A          219 DVAYAVAFLASNNASYITGQTLHVNGG  245 (249)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHcCCccCCccCcEEEECCC
Confidence            99999999997643  35664 45443

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.94  E-value=9.6e-26  Score=186.53  Aligned_cols=215  Identities=15%  Similarity=0.089  Sum_probs=156.2

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC-CChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNH-GKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      ++|++|||||+|+||+++++.|+++|++|++++|+. +..+.+.+++  .....++.++.+|++|.+++.++++      
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   80 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEI--KAKGVDSFAIQANVADADEVKAMIKEVVSQF   80 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH--HHTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH--HhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            458999999999999999999999999999988754 3344444322  2234578899999999999888876      


Q ss_pred             -cCCEEEecCCCCCCCC----cc--hhhhHhHhhHHHHHHHHHH----HhcCCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS----TY--DELTAEVETMAAHNVLEAC----AQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~----~~--~~~~~~~n~~~~~~ll~~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                       ++|++||||+......    ..  .++.+++|+.++.++++++    ++. +..++|++||..+.......        
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~--------  151 (246)
T 3osu_A           81 GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQ-RSGAIINLSSVVGAVGNPGQ--------  151 (246)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHHCCTTC--------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEEcchhhcCCCCCC--------
Confidence             6899999999754321    11  1378999999999999988    444 56799999998643321111        


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccc-ccc-CCCccccc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAA-EMY-EDGVMASV  241 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~-~~~-~~~~~~~v  241 (294)
                                     ..|+.+|.+.+.+.+.++.+   +|+++++++||.++++......   .... ... ......+.
T Consensus       152 ---------------~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~---~~~~~~~~~~~p~~r~~  213 (246)
T 3osu_A          152 ---------------ANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALS---DELKEQMLTQIPLARFG  213 (246)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSC---HHHHHHHHTTCTTCSCB
T ss_pred             ---------------hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccC---HHHHHHHHhcCCCCCCc
Confidence                           78999999999999998874   5899999999999987632211   1000 011 11112278


Q ss_pred             cHHHHHHHHHhhhcCcC--CCCe-EEeecc
Q 043792          242 DLRFYVDAHICVFEDVS--SYGR-YLCFNH  268 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~~--~~~~-~~~~~~  268 (294)
                      +++|+|++++.++....  .+|+ +.+.++
T Consensus       214 ~~~dva~~v~~l~s~~~~~itG~~i~vdgG  243 (246)
T 3osu_A          214 QDTDIANTVAFLASDKAKYITGQTIHVNGG  243 (246)
T ss_dssp             CHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence            89999999999987543  3466 445443

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.94  E-value=1.4e-25  Score=189.04  Aligned_cols=224  Identities=13%  Similarity=0.058  Sum_probs=151.4

Q ss_pred             CCCCCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecC-CCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-
Q 043792           20 YDSSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHN-HGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-   97 (294)
Q Consensus        20 ~~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-   97 (294)
                      +|...+++++|||||+|+||+++++.|+++|++|++++|+ .+..+.+..+  ......++.++.+|++|++++.++++ 
T Consensus        23 mm~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dv~d~~~v~~~~~~  100 (280)
T 4da9_A           23 MMTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAE--LSGLGARVIFLRADLADLSSHQATVDA  100 (280)
T ss_dssp             CCSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHH--HHHTTCCEEEEECCTTSGGGHHHHHHH
T ss_pred             hhhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH--HHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            3444567899999999999999999999999999999964 4444444332  22234679999999999998888876 


Q ss_pred             ------cCCEEEecCCCCC--CC------CcchhhhHhHhhHHHHHHHHHHHhc---CC---CcEEEEecCcceeeeCCC
Q 043792           98 ------GCSGLFYSFEPPS--DH------STYDELTAEVETMAAHNVLEACAQT---NT---VDKVVFTSSLTAVVWNNH  157 (294)
Q Consensus        98 ------~~d~Vih~a~~~~--~~------~~~~~~~~~~n~~~~~~ll~~~~~~---~~---~~~~v~~Ss~~~~~~~~~  157 (294)
                            ++|++||||+...  ..      ....++.+++|+.++.++++++.+.   .+   ..++|++||..+......
T Consensus       101 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~  180 (280)
T 4da9_A          101 VVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPE  180 (280)
T ss_dssp             HHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------C
T ss_pred             HHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCC
Confidence                  6899999998732  11      1112378899999999998887544   12   468999999864322111


Q ss_pred             CCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccC
Q 043792          158 RDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYE  234 (294)
Q Consensus       158 ~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~  234 (294)
                      .                       ..|+.+|.+.+.+.+.++.+   .|+++.+++||.|.++......   ........
T Consensus       181 ~-----------------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~---~~~~~~~~  234 (280)
T 4da9_A          181 R-----------------------LDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVS---GKYDGLIE  234 (280)
T ss_dssp             C-----------------------HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------
T ss_pred             c-----------------------cHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcc---hhHHHHHh
Confidence            1                       67999999999999998877   5899999999999887632211   11111111


Q ss_pred             C---CccccccHHHHHHHHHhhhcCcC--CCCeEEeeccccc
Q 043792          235 D---GVMASVDLRFYVDAHICVFEDVS--SYGRYLCFNHVIN  271 (294)
Q Consensus       235 ~---~~~~~v~v~D~a~~i~~~~~~~~--~~~~~~~~~~~~s  271 (294)
                      .   ....+.+++|+|++++.++....  .+|+.+..++..+
T Consensus       235 ~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  276 (280)
T 4da9_A          235 SGLVPMRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGGLS  276 (280)
T ss_dssp             -------CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTTCC
T ss_pred             hcCCCcCCcCCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            1   11227899999999999987654  4676544444433

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.94  E-value=3.2e-25  Score=186.36  Aligned_cols=221  Identities=14%  Similarity=0.024  Sum_probs=160.4

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++|++|||||+|+||+++++.|+++|++|++++|+.+..+.+.+++  .....++.++.+|++|+++++++++     
T Consensus        29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  106 (276)
T 3r1i_A           29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEI--AGVGGKALPIRCDVTQPDQVRGMLDQMTGE  106 (276)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHH--HHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999887776665543  2334578999999999999888876     


Q ss_pred             --cCCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc---CC-CcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT---NT-VDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~---~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                        ++|++||||+........      .++.+++|+.++.++++++.+.   .+ ..++|++||..+.......       
T Consensus       107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~-------  179 (276)
T 3r1i_A          107 LGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQ-------  179 (276)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSS-------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCC-------
Confidence              689999999976543211      1377899999999999987654   12 3689999997632211100       


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCCCcccccc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVD  242 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~  242 (294)
                              +.      ..|+.+|.+.+.+.+.++.+   .++++++++||.|.++................+-  ..+.+
T Consensus       180 --------~~------~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~p~--~r~~~  243 (276)
T 3r1i_A          180 --------QV------SHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADYHALWEPKIPL--GRMGR  243 (276)
T ss_dssp             --------CC------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGGHHHHGGGSTT--SSCBC
T ss_pred             --------Cc------chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHHHHHHHhcCCC--CCCcC
Confidence                    01      67999999999999999877   5899999999999877632111000000011111  12788


Q ss_pred             HHHHHHHHHhhhcCcC--CCCeEE-eecc
Q 043792          243 LRFYVDAHICVFEDVS--SYGRYL-CFNH  268 (294)
Q Consensus       243 v~D~a~~i~~~~~~~~--~~~~~~-~~~~  268 (294)
                      ++|+|++++.++....  .+|+.+ +.++
T Consensus       244 pedvA~~v~fL~s~~~~~itG~~i~vdGG  272 (276)
T 3r1i_A          244 PEELTGLYLYLASAASSYMTGSDIVIDGG  272 (276)
T ss_dssp             GGGSHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHHcCccccCccCcEEEECcC
Confidence            9999999999987543  356644 4443

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.94  E-value=3.5e-26  Score=189.27  Aligned_cols=219  Identities=14%  Similarity=0.056  Sum_probs=155.6

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++|+||||+|+||+++++.|+++|++|++++|+.++.+.+..++.. ....++.++.+|++|++++.++++      
T Consensus         5 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (248)
T 2pnf_A            5 LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIAN-KYGVKAHGVEMNLLSEESINKAFEEIYNLV   83 (248)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH-HHCCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHh-hcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            4568999999999999999999999999999999986655544432210 023478899999999999988876      


Q ss_pred             -cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                       ++|+|||||+......      ...+..+++|+.++.++++++.    +. +.++||++||..+.. +...    .   
T Consensus        84 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~-~~~~----~---  154 (248)
T 2pnf_A           84 DGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQ-RWGRIVNISSVVGFT-GNVG----Q---  154 (248)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHH-TCEEEEEECCHHHHH-CCTT----C---
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCcEEEEEccHHhcC-CCCC----C---
Confidence             6899999998754321      1123789999999977777654    34 668999999975322 2111    1   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccH
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDL  243 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v  243 (294)
                                     ..|+.+|.+.+.+.+.++.+   .+++++++|||.++++............. ........++++
T Consensus       155 ---------------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~  218 (248)
T 2pnf_A          155 ---------------VNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQKY-KEQIPLGRFGSP  218 (248)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHH-HHTCTTSSCBCH
T ss_pred             ---------------chHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccHHHHHHH-HhcCCCCCccCH
Confidence                           67999999999999988766   37999999999998876321100000000 000111238899


Q ss_pred             HHHHHHHHhhhcCc--CCCCe-EEeecc
Q 043792          244 RFYVDAHICVFEDV--SSYGR-YLCFNH  268 (294)
Q Consensus       244 ~D~a~~i~~~~~~~--~~~~~-~~~~~~  268 (294)
                      +|+|++++.++...  ...|+ |.+.++
T Consensus       219 ~dva~~~~~l~~~~~~~~~G~~~~v~gg  246 (248)
T 2pnf_A          219 EEVANVVLFLCSELASYITGEVIHVNGG  246 (248)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHhCchhhcCCCcEEEeCCC
Confidence            99999999998753  23455 555543

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.94  E-value=1e-25  Score=188.23  Aligned_cols=221  Identities=14%  Similarity=0.087  Sum_probs=156.8

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++.. ....++.++.+|++|++++.++++      
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (263)
T 3ai3_A            5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKE-KFGVRVLEVAVDVATPEGVDAVVESVRSSF   83 (263)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-HHCCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHH-hcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4568999999999999999999999999999999987655544432211 003478899999999999888876      


Q ss_pred             -cCCEEEecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS----T--YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                       ++|+|||||+......    .  ..+..+++|+.++.++++++...   .+.+++|++||..++.....     .    
T Consensus        84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----~----  154 (263)
T 3ai3_A           84 GGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWY-----E----  154 (263)
T ss_dssp             SSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-----C----
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCC-----c----
Confidence             6899999998754321    1  12378999999999998887532   15679999999863221111     1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-cc------cccc-ccc--C
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YL------KGAA-EMY--E  234 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~------~~~~-~~~--~  234 (294)
                                    ..|+.+|.+.+.+.+.++.+   +|++++++|||.++++....... +.      .... ..+  .
T Consensus       155 --------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (263)
T 3ai3_A          155 --------------PIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADE  220 (263)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHH
T ss_pred             --------------chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhc
Confidence                          67999999999999998876   58999999999999875211000 00      0000 000  0


Q ss_pred             -CCccccccHHHHHHHHHhhhcCcC--CCCe-EEeecc
Q 043792          235 -DGVMASVDLRFYVDAHICVFEDVS--SYGR-YLCFNH  268 (294)
Q Consensus       235 -~~~~~~v~v~D~a~~i~~~~~~~~--~~~~-~~~~~~  268 (294)
                       .....+.+++|+|++++.++..+.  ..|+ +.+.++
T Consensus       221 ~~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG  258 (263)
T 3ai3_A          221 HAPIKRFASPEELANFFVFLCSERATYSVGSAYFVDGG  258 (263)
T ss_dssp             HCTTCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTT
T ss_pred             CCCCCCCcCHHHHHHHHHHHcCccccCCCCcEEEECCC
Confidence             111238999999999999987543  3465 455443

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.94  E-value=7.4e-25  Score=184.79  Aligned_cols=224  Identities=12%  Similarity=0.000  Sum_probs=159.0

Q ss_pred             CCCCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc---
Q 043792           21 DSSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK---   97 (294)
Q Consensus        21 ~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---   97 (294)
                      |+..+++++|||||+|+||+++++.|+++|++|++++|+.+..+.+.+++  .....++.++.+|++|++++.++++   
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l--~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  100 (283)
T 3v8b_A           23 MMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEI--VGAGGQAIALEADVSDELQMRNAVRDLV  100 (283)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH--TTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             hcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            34556789999999999999999999999999999999877666655532  2345678999999999998888775   


Q ss_pred             ----cCCEEEecCCCCCC-C----Cc--chhhhHhHhhHHHHHHHHHH----HhcCCCcEEEEecCcceeee-CCCCCCC
Q 043792           98 ----GCSGLFYSFEPPSD-H----ST--YDELTAEVETMAAHNVLEAC----AQTNTVDKVVFTSSLTAVVW-NNHRDNP  161 (294)
Q Consensus        98 ----~~d~Vih~a~~~~~-~----~~--~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~v~~Ss~~~~~~-~~~~~~~  161 (294)
                          ++|++||||+.... .    ..  ..++.+++|+.++.++++++    ++. +..++|++||..+... +...   
T Consensus       101 ~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~Iv~isS~~~~~~~~~~~---  176 (283)
T 3v8b_A          101 LKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQR-GGGAIVVVSSINGTRTFTTPG---  176 (283)
T ss_dssp             HHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCSBTTTBCCSTT---
T ss_pred             HHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCceEEEEcChhhccCCCCCC---
Confidence                68999999997432 1    11  11378999999999999987    444 5579999999753221 1000   


Q ss_pred             CCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccc---c-cccc-
Q 043792          162 TSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKG---A-AEMY-  233 (294)
Q Consensus       162 ~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~---~-~~~~-  233 (294)
                       .                  ..|+.+|.+.+.+.+.++.+   +|+++.+++||.+..+...........   . .... 
T Consensus       177 -~------------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  237 (283)
T 3v8b_A          177 -A------------------TAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPK  237 (283)
T ss_dssp             -C------------------HHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTT
T ss_pred             -c------------------hHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhh
Confidence             1                  67999999999999999877   479999999999988764321100000   0 0000 


Q ss_pred             CCCc---cccccHHHHHHHHHhhhcCcC--CCCeEEeeccc
Q 043792          234 EDGV---MASVDLRFYVDAHICVFEDVS--SYGRYLCFNHV  269 (294)
Q Consensus       234 ~~~~---~~~v~v~D~a~~i~~~~~~~~--~~~~~~~~~~~  269 (294)
                      ....   ..+..++|+|++++.++....  .+|+.+..++.
T Consensus       238 ~~~p~~~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG  278 (283)
T 3v8b_A          238 GQVPITDGQPGRSEDVAELIRFLVSERARHVTGSPVWIDGG  278 (283)
T ss_dssp             CSCGGGTTCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             hcCccccCCCCCHHHHHHHHHHHcCccccCCcCCEEEECcC
Confidence            0000   226789999999999986543  46775544433

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.94  E-value=2.3e-25  Score=185.77  Aligned_cols=219  Identities=12%  Similarity=0.040  Sum_probs=153.8

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++.......++.++.+|++|++++.++++      
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (260)
T 2z1n_A            5 IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLG   84 (260)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            45689999999999999999999999999999999876555544432110012278899999999999988886      


Q ss_pred             cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                      ++|+|||||+......      ...+..+++|+.++.++++++.    +. +.+++|++||..++.... .    .    
T Consensus        85 gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~-~----~----  154 (260)
T 2z1n_A           85 GADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEK-GWGRMVYIGSVTLLRPWQ-D----L----  154 (260)
T ss_dssp             CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCT-T----B----
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECchhhcCCCC-C----C----
Confidence            5899999998654321      1123789999999977777654    44 568999999986322111 1    1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCC-------cccccc-cccc-C-
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISN-------PYLKGA-AEMY-E-  234 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~-------~~~~~~-~~~~-~-  234 (294)
                                    ..|+.+|.+.+.+.+.++.+.   |+++++++||.++++......       ...... ...+ . 
T Consensus       155 --------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (260)
T 2z1n_A          155 --------------ALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASR  220 (260)
T ss_dssp             --------------HHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------C
T ss_pred             --------------chhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhc
Confidence                          679999999999999888764   899999999999988643100       000000 0000 0 


Q ss_pred             CCccccccHHHHHHHHHhhhcCc--CCCCeEEee
Q 043792          235 DGVMASVDLRFYVDAHICVFEDV--SSYGRYLCF  266 (294)
Q Consensus       235 ~~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~  266 (294)
                      .....+.+++|+|++++.++...  ..+|+.+..
T Consensus       221 ~p~~r~~~~~dva~~v~~l~s~~~~~~tG~~i~v  254 (260)
T 2z1n_A          221 IPMGRVGKPEELASVVAFLASEKASFITGAVIPV  254 (260)
T ss_dssp             CTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEE
T ss_pred             CCCCCccCHHHHHHHHHHHhCccccCCCCCEEEe
Confidence            01122789999999999998753  335665433

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.94  E-value=2.2e-25  Score=184.09  Aligned_cols=198  Identities=12%  Similarity=0.006  Sum_probs=151.0

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCC-------eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGY-------TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-   97 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-   97 (294)
                      +|+||||||+|+||+++++.|+++|+       +|++++|+.+..+.+..++  .....++.++.+|++|++++.++++ 
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~v~~~~~~   79 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLEC--RAEGALTDTITADISDMADVRRLTTH   79 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHH--HTTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHH--HccCCeeeEEEecCCCHHHHHHHHHH
Confidence            57899999999999999999999999       9999999876555554432  1224578899999999998888876 


Q ss_pred             ------cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCC
Q 043792           98 ------GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPT  162 (294)
Q Consensus        98 ------~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~  162 (294)
                            ++|+|||||+......      ...+..+++|+.++.++++++...   .+.++||++||..++.....     
T Consensus        80 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-----  154 (244)
T 2bd0_A           80 IVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRH-----  154 (244)
T ss_dssp             HHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-----
T ss_pred             HHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCC-----
Confidence                  5899999999754321      112378999999999999987532   15679999999863221111     


Q ss_pred             CCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCCCccc
Q 043792          163 SHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMA  239 (294)
Q Consensus       163 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~  239 (294)
                      .                  ..|+.+|.+.+.+.+.++.+   .+++++++|||.++++......   . .      ....
T Consensus       155 ~------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~-~------~~~~  206 (244)
T 2bd0_A          155 S------------------SIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVD---D-E------MQAL  206 (244)
T ss_dssp             C------------------HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCC---S-T------TGGG
T ss_pred             C------------------chhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhcc---c-c------cccc
Confidence            1                  67999999999999887754   5899999999999998732111   0 0      0224


Q ss_pred             cccHHHHHHHHHhhhcCcC
Q 043792          240 SVDLRFYVDAHICVFEDVS  258 (294)
Q Consensus       240 ~v~v~D~a~~i~~~~~~~~  258 (294)
                      +++++|+|++++.++..+.
T Consensus       207 ~~~~~dva~~~~~l~~~~~  225 (244)
T 2bd0_A          207 MMMPEDIAAPVVQAYLQPS  225 (244)
T ss_dssp             SBCHHHHHHHHHHHHTSCT
T ss_pred             CCCHHHHHHHHHHHHhCCc
Confidence            8999999999999997654

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.94  E-value=1.2e-25  Score=185.89  Aligned_cols=217  Identities=14%  Similarity=0.023  Sum_probs=148.1

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEE-ecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAA-LHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      .++++||||||+|+||++++++|+++|++|+++ .|+.+..+.+.+++  .....++.++.+|++|++++.++++     
T Consensus         3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T 2hq1_A            3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEF--KAAGINVVVAKGDVKNPEDVENMVKTAMDA   80 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHH--HHTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHH--HhcCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            356899999999999999999999999999999 55655554444322  1224578999999999999888876     


Q ss_pred             --cCCEEEecCCCCCCC------CcchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDH------STYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~------~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                        ++|+|||||+.....      ....+..+++|+.++.++++++.+.   .+.++||++||..+. ++...    .   
T Consensus        81 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-~~~~~----~---  152 (247)
T 2hq1_A           81 FGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGI-IGNAG----Q---  152 (247)
T ss_dssp             HSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------C---
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhc-cCCCC----C---
Confidence              689999999875421      1222478999999998888876642   156799999997532 22111    1   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCcccccccc-cc-CCCccccc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAAE-MY-EDGVMASV  241 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~~-~~-~~~~~~~v  241 (294)
                                     ..|+.+|.+.+.+.+.++.+.   ++++++++||.+.++....   +...... .. ......++
T Consensus       153 ---------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~~~~~~~  214 (247)
T 2hq1_A          153 ---------------ANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDV---LPDKVKEMYLNNIPLKRFG  214 (247)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT---SCHHHHHHHHTTSTTSSCB
T ss_pred             ---------------cHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhh---cchHHHHHHHhhCCCCCCC
Confidence                           689999999999999988764   8999999999997664111   1000000 00 11112388


Q ss_pred             cHHHHHHHHHhhhcCcC--CCCe-EEeecc
Q 043792          242 DLRFYVDAHICVFEDVS--SYGR-YLCFNH  268 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~~--~~~~-~~~~~~  268 (294)
                      +++|+|++++.++..+.  ..|+ |++.++
T Consensus       215 ~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  244 (247)
T 2hq1_A          215 TPEEVANVVGFLASDDSNYITGQVINIDGG  244 (247)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHcCcccccccCcEEEeCCC
Confidence            99999999999886542  3465 555543

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.94  E-value=2.6e-26  Score=192.91  Aligned_cols=221  Identities=16%  Similarity=0.033  Sum_probs=157.1

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEec-CCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALH-NHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      ..++|+||||||+|+||++++++|+++|++|++++| +.+..+.+..++  .....++.++.+|++|++++.++++    
T Consensus        18 ~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (274)
T 1ja9_A           18 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAEL--KKLGAQGVAIQADISKPSEVVALFDKAVS   95 (274)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH--HHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHH--HhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999 544444443322  1224578899999999999988876    


Q ss_pred             ---cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                         ++|+|||+|+.......      ..+..+++|+.++.++++++.+.  ++ ++||++||..++..+...    .   
T Consensus        96 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~~----~---  167 (274)
T 1ja9_A           96 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTGIPN----H---  167 (274)
T ss_dssp             HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCSCCS----C---
T ss_pred             HcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCCCCC----C---
Confidence               68999999987543211      11378999999999999988764  23 699999998643112111    1   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCC--C-------ccccccc-ccc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTIS--N-------PYLKGAA-EMY  233 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~--~-------~~~~~~~-~~~  233 (294)
                                     ..|+.+|.+.|.+++.++.+.   +++++++|||.++++.....  .       ....+.. ..+
T Consensus       168 ---------------~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (274)
T 1ja9_A          168 ---------------ALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGL  232 (274)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHH
T ss_pred             ---------------chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHH
Confidence                           679999999999999988774   89999999999987642100  0       0000000 011


Q ss_pred             --CCCccccccHHHHHHHHHhhhcCcCC--CCe-EEeecc
Q 043792          234 --EDGVMASVDLRFYVDAHICVFEDVSS--YGR-YLCFNH  268 (294)
Q Consensus       234 --~~~~~~~v~v~D~a~~i~~~~~~~~~--~~~-~~~~~~  268 (294)
                        ......+++++|+|++++.++..+..  .|+ |.+.++
T Consensus       233 ~~~~~~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG  272 (274)
T 1ja9_A          233 ANMNPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGG  272 (274)
T ss_dssp             HHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HhcCCCCCccCHHHHHHHHHHHhCcccccccCcEEEecCC
Confidence              11122389999999999999976432  455 555544

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.94  E-value=1.7e-25  Score=187.01  Aligned_cols=216  Identities=14%  Similarity=0.091  Sum_probs=153.4

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCCh-hhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKL-QCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      .++++|+||||+|+||+++++.|+++|++|++++|+.... +.+.+.  ......++.++.+|++|.+++.++++     
T Consensus         5 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   82 (264)
T 3i4f_A            5 RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKET--YKDVEERLQFVQADVTKKEDLHKIVEEAMSH   82 (264)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH--TGGGGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHH--HHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            4568999999999999999999999999999998876443 333331  12234579999999999999888876     


Q ss_pred             --cCCEEEecCCCC--CCCC----c--chhhhHhHhhHHHHHHHHHH----HhcCCCcEEEEecCccee-eeCCCCCCCC
Q 043792           98 --GCSGLFYSFEPP--SDHS----T--YDELTAEVETMAAHNVLEAC----AQTNTVDKVVFTSSLTAV-VWNNHRDNPT  162 (294)
Q Consensus        98 --~~d~Vih~a~~~--~~~~----~--~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~v~~Ss~~~~-~~~~~~~~~~  162 (294)
                        ++|+|||||+..  ....    .  ..+..+++|+.++.++++++    ++. +..++|++||.++. ..+...    
T Consensus        83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~~~~~~~----  157 (264)
T 3i4f_A           83 FGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQ-NFGRIINYGFQGADSAPGWIY----  157 (264)
T ss_dssp             HSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCTTGGGCCCCTT----
T ss_pred             hCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-CCCeEEEEeechhcccCCCCC----
Confidence              689999999942  2111    1  11378999999999999988    445 56799999987422 111100    


Q ss_pred             CCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccC--CCc
Q 043792          163 SHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYE--DGV  237 (294)
Q Consensus       163 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~--~~~  237 (294)
                      .                  ..|+.+|.+.+.+.+.++.+   .++++++++||.++++......   ........  ...
T Consensus       158 ~------------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~p~  216 (264)
T 3i4f_A          158 R------------------SAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATI---QEARQLKEHNTPI  216 (264)
T ss_dssp             C------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCH---HHHHHC-------
T ss_pred             C------------------chhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhcc---HHHHHHHhhcCCC
Confidence            1                  67999999999999998877   5899999999999887632211   11001111  111


Q ss_pred             cccccHHHHHHHHHhhhcCcC--CCCeE-Eeec
Q 043792          238 MASVDLRFYVDAHICVFEDVS--SYGRY-LCFN  267 (294)
Q Consensus       238 ~~~v~v~D~a~~i~~~~~~~~--~~~~~-~~~~  267 (294)
                      ..+.+++|+|++++.++....  .+|+. .+.+
T Consensus       217 ~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdG  249 (264)
T 3i4f_A          217 GRSGTGEDIARTISFLCEDDSDMITGTIIEVTG  249 (264)
T ss_dssp             -CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESC
T ss_pred             CCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcC
Confidence            227899999999999997543  35664 4444

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.94  E-value=1.2e-25  Score=187.46  Aligned_cols=219  Identities=11%  Similarity=-0.014  Sum_probs=154.3

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEec-CCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALH-NHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      .++++||||||+|+||++++++|+++|++|++++| +.+..+.+.+++  .....++.++.+|++|.+++.++++     
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (261)
T 1gee_A            5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEI--KKVGGEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH--HHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHH--HhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999 554444443322  1223568899999999998888776     


Q ss_pred             --cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---CC-CcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---NT-VDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                        ++|+|||||+......      ...++.+++|+.++.++++++.+.   .+ .++||++||..+.....         
T Consensus        83 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~---------  153 (261)
T 1gee_A           83 FGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWP---------  153 (261)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCT---------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCC---------
Confidence              6899999998754321      112378999999999988876543   13 57999999975321110         


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccc-ccc-CCCcccc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAA-EMY-EDGVMAS  240 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~-~~~-~~~~~~~  240 (294)
                              +.      ..|+.+|.+.+.+.+.++.+.   +++++++|||.++++...... ...... ... ......+
T Consensus       154 --------~~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~  218 (261)
T 1gee_A          154 --------LF------VHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKF-ADPEQRADVESMIPMGYI  218 (261)
T ss_dssp             --------TC------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHH-HSHHHHHHHHTTCTTSSC
T ss_pred             --------Cc------cHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcc-cChhHHHHHHhcCCCCCC
Confidence                    01      689999999999998887664   899999999999988621100 000000 000 0111238


Q ss_pred             ccHHHHHHHHHhhhcCc--CCCCeE-Eeecc
Q 043792          241 VDLRFYVDAHICVFEDV--SSYGRY-LCFNH  268 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~--~~~~~~-~~~~~  268 (294)
                      ++++|+|++++.++...  ...|+. .+.++
T Consensus       219 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  249 (261)
T 1gee_A          219 GEPEEIAAVAAWLASSEASYVTGITLFADGG  249 (261)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHhCccccCCCCcEEEEcCC
Confidence            89999999999998653  235664 44443

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.94  E-value=4e-25  Score=184.49  Aligned_cols=209  Identities=15%  Similarity=0.027  Sum_probs=149.6

Q ss_pred             ccCCCCCCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHh
Q 043792           17 RDGYDSSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNAL   96 (294)
Q Consensus        17 ~~~~~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~   96 (294)
                      ....|.+..+++||||||+|+||+++++.|+++|++|++++|+.++.+.+..++  .....++.++.+|++|.+++.+++
T Consensus        20 ~~~~m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~v~~~~   97 (262)
T 3rkr_A           20 DDKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREI--VAAGGEAESHACDLSHSDAIAAFA   97 (262)
T ss_dssp             -----CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--HHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CcchhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH--HHhCCceeEEEecCCCHHHHHHHH
Confidence            344455667899999999999999999999999999999999887666555432  223457899999999999988877


Q ss_pred             c-------cCCEEEecCCCCCCCC-----c--chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCC
Q 043792           97 K-------GCSGLFYSFEPPSDHS-----T--YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRD  159 (294)
Q Consensus        97 ~-------~~d~Vih~a~~~~~~~-----~--~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~  159 (294)
                      +       .+|+||||||......     .  ..+..+++|+.++.++++++...   .+..+||++||..+....... 
T Consensus        98 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-  176 (262)
T 3rkr_A           98 TGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADG-  176 (262)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTC-
T ss_pred             HHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCC-
Confidence            5       4799999999732111     1  11378999999999999986542   256799999998633211111 


Q ss_pred             CCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCCC
Q 043792          160 NPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDG  236 (294)
Q Consensus       160 ~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~  236 (294)
                                            ..|+.+|.+.+.+.+.++.+   .++++++++||.+..+....   ....      ..
T Consensus       177 ----------------------~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---~~~~------~~  225 (262)
T 3rkr_A          177 ----------------------AAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVG---LSAK------KS  225 (262)
T ss_dssp             ----------------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------
T ss_pred             ----------------------chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccc---cccc------cc
Confidence                                  78999999999999988866   58999999999997655211   1110      11


Q ss_pred             ccccccHHHHHHHHHhhhcCcCC
Q 043792          237 VMASVDLRFYVDAHICVFEDVSS  259 (294)
Q Consensus       237 ~~~~v~v~D~a~~i~~~~~~~~~  259 (294)
                      ...++.++|+|++++.++.....
T Consensus       226 ~~~~~~p~dvA~~v~~l~s~~~~  248 (262)
T 3rkr_A          226 ALGAIEPDDIADVVALLATQADQ  248 (262)
T ss_dssp             ---CCCHHHHHHHHHHHHTCCTT
T ss_pred             cccCCCHHHHHHHHHHHhcCccc
Confidence            12378999999999999876543

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.94  E-value=1.8e-25  Score=188.06  Aligned_cols=218  Identities=12%  Similarity=0.032  Sum_probs=154.2

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEec-CCCChhhHHHHHhhccCCCCeEEEECCCCCh----hHHHHHhc-
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALH-NHGKLQCIEEELINYNEEKKLKVFQADPFDY----HSLVNALK-   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~----~~~~~~~~-   97 (294)
                      +++++||||||+|+||+++++.|+++|++|++++| +.+..+.+.+++.. ....++.++.+|++|.    +++.++++ 
T Consensus         9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   87 (276)
T 1mxh_A            9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNA-ARAGSAVLCKGDLSLSSSLLDCCEDIIDC   87 (276)
T ss_dssp             --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-HSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHH-hcCCceEEEeccCCCccccHHHHHHHHHH
Confidence            34689999999999999999999999999999999 65555544442211 1135789999999999    88887775 


Q ss_pred             ------cCCEEEecCCCCCCCC-----------------cchhhhHhHhhHHHHHHHHHHHhc--CCC------cEEEEe
Q 043792           98 ------GCSGLFYSFEPPSDHS-----------------TYDELTAEVETMAAHNVLEACAQT--NTV------DKVVFT  146 (294)
Q Consensus        98 ------~~d~Vih~a~~~~~~~-----------------~~~~~~~~~n~~~~~~ll~~~~~~--~~~------~~~v~~  146 (294)
                            ++|+||||||......                 ...+..+++|+.++.++++++.+.  .+.      ++||++
T Consensus        88 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~i  167 (276)
T 1mxh_A           88 SFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNL  167 (276)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEE
T ss_pred             HHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEE
Confidence                  6899999998653221                 122378999999999999998874  133      799999


Q ss_pred             cCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCC
Q 043792          147 SSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISN  223 (294)
Q Consensus       147 Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~  223 (294)
                      ||..++......                       ..|+.+|.+.+.+.+.++.+.   |+++++++||.++++ .....
T Consensus       168 sS~~~~~~~~~~-----------------------~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~~~~~  223 (276)
T 1mxh_A          168 CDAMTDLPLPGF-----------------------CVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-PAMPQ  223 (276)
T ss_dssp             CCGGGGSCCTTC-----------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-SSSCH
T ss_pred             CchhhcCCCCCC-----------------------eehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-ccCCH
Confidence            998643211111                       679999999999999988764   899999999999998 21111


Q ss_pred             ccccccccccCCCccc-cccHHHHHHHHHhhhcCcC--CCCeE-Eeecc
Q 043792          224 PYLKGAAEMYEDGVMA-SVDLRFYVDAHICVFEDVS--SYGRY-LCFNH  268 (294)
Q Consensus       224 ~~~~~~~~~~~~~~~~-~v~v~D~a~~i~~~~~~~~--~~~~~-~~~~~  268 (294)
                      ..........  .... +.+++|+|++++.++....  ..|++ .+.++
T Consensus       224 ~~~~~~~~~~--p~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG  270 (276)
T 1mxh_A          224 ETQEEYRRKV--PLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGG  270 (276)
T ss_dssp             HHHHHHHTTC--TTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHhcC--CCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCc
Confidence            0100000001  1122 7899999999999987543  35664 44443

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.94  E-value=4.3e-25  Score=186.20  Aligned_cols=225  Identities=12%  Similarity=-0.012  Sum_probs=158.0

Q ss_pred             CCCCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC---------hhhHHHHHh-hccCCCCeEEEECCCCChh
Q 043792           21 DSSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK---------LQCIEEELI-NYNEEKKLKVFQADPFDYH   90 (294)
Q Consensus        21 ~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---------~~~l~~~~~-~~~~~~~v~~~~~Dl~~~~   90 (294)
                      |...+++++|||||+|+||+++++.|+++|++|++++|++..         .+.+.+... ......++.++.+|++|++
T Consensus         5 m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   84 (281)
T 3s55_A            5 MADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRA   84 (281)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHH
Confidence            345667999999999999999999999999999999997432         222211000 1223467899999999999


Q ss_pred             HHHHHhc-------cCCEEEecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeee
Q 043792           91 SLVNALK-------GCSGLFYSFEPPSDHS----T--YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVW  154 (294)
Q Consensus        91 ~~~~~~~-------~~d~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~  154 (294)
                      ++.++++       ++|++||||+......    .  ..++.+++|+.++.++++++...   .+..++|++||..+...
T Consensus        85 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  164 (281)
T 3s55_A           85 ALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSA  164 (281)
T ss_dssp             HHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCC
Confidence            9888876       6899999999754321    1  12378999999999999986432   15579999999864321


Q ss_pred             CCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCC---cc---
Q 043792          155 NNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISN---PY---  225 (294)
Q Consensus       155 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~---~~---  225 (294)
                      ....                       ..|+.+|.+.+.+.+.++.+   +|+++++++||.|+++......   .+   
T Consensus       165 ~~~~-----------------------~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~  221 (281)
T 3s55_A          165 NFAQ-----------------------ASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPD  221 (281)
T ss_dssp             CTTC-----------------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC----
T ss_pred             CCCC-----------------------chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhcccccc
Confidence            1111                       68999999999999999886   4899999999999998743210   00   


Q ss_pred             -cccc----cc---ccCCCccccccHHHHHHHHHhhhcCcC--CCCe-EEeecc
Q 043792          226 -LKGA----AE---MYEDGVMASVDLRFYVDAHICVFEDVS--SYGR-YLCFNH  268 (294)
Q Consensus       226 -~~~~----~~---~~~~~~~~~v~v~D~a~~i~~~~~~~~--~~~~-~~~~~~  268 (294)
                       ....    ..   ........+.+++|+|++++.++....  .+|+ +.+.++
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG  275 (281)
T 3s55_A          222 LEKPTLKDVESVFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAG  275 (281)
T ss_dssp             ---CCHHHHHHHHHHHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ccccchhHHHHHHHhhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCC
Confidence             0000    00   001111238999999999999997643  3566 445443

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.94  E-value=9.7e-26  Score=188.51  Aligned_cols=215  Identities=19%  Similarity=0.101  Sum_probs=152.6

Q ss_pred             CCCCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc---
Q 043792           21 DSSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK---   97 (294)
Q Consensus        21 ~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---   97 (294)
                      |...++|+||||||+|+||+++++.|+++|++|++++|+.++.+.+..+     ...++.++.+|++|++++.++++   
T Consensus        22 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~Dv~d~~~v~~~~~~~~   96 (266)
T 3grp_A           22 MFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAAD-----LGKDVFVFSANLSDRKSIKQLAEVAE   96 (266)
T ss_dssp             TTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-----HCSSEEEEECCTTSHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-----hCCceEEEEeecCCHHHHHHHHHHHH
Confidence            4456789999999999999999999999999999999987665555442     13578999999999998888775   


Q ss_pred             ----cCCEEEecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCCC
Q 043792           98 ----GCSGLFYSFEPPSDHS----T--YDELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPTS  163 (294)
Q Consensus        98 ----~~d~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~  163 (294)
                          ++|+||||||......    .  ..++.+++|+.++.++.+++.    +. +..++|++||..++. +...    .
T Consensus        97 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~Iv~isS~~~~~-~~~~----~  170 (266)
T 3grp_A           97 REMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRR-RYGRIINITSIVGVV-GNPG----Q  170 (266)
T ss_dssp             HHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCC--------C----H
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcEEEEECCHHHcC-CCCC----c
Confidence                6899999999754321    1  123789999999777777654    34 557999999986432 1111    1


Q ss_pred             CCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCcccccccc-cc-CCCcc
Q 043792          164 HDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAE-MY-EDGVM  238 (294)
Q Consensus       164 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~-~~-~~~~~  238 (294)
                                        ..|+.+|.+.+.+.+.++.+   .|+++.+++||.+.++......   ..... .. .....
T Consensus       171 ------------------~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~---~~~~~~~~~~~p~~  229 (266)
T 3grp_A          171 ------------------TNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLN---EKQKEAIMAMIPMK  229 (266)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCC---HHHHHHHHTTCTTC
T ss_pred             ------------------hhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccC---HHHHHHHHhcCCCC
Confidence                              78999999999999988876   4899999999999876421111   00000 00 11112


Q ss_pred             ccccHHHHHHHHHhhhcCcC--CCCeEEeec
Q 043792          239 ASVDLRFYVDAHICVFEDVS--SYGRYLCFN  267 (294)
Q Consensus       239 ~~v~v~D~a~~i~~~~~~~~--~~~~~~~~~  267 (294)
                      .+.+++|+|++++.++....  .+|+.+..+
T Consensus       230 r~~~~edvA~~v~~L~s~~~~~itG~~i~vd  260 (266)
T 3grp_A          230 RMGIGEEIAFATVYLASDEAAYLTGQTLHIN  260 (266)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             CCcCHHHHHHHHHHHhCccccCccCCEEEEC
Confidence            27889999999999986543  356654433

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.94  E-value=2.6e-25  Score=186.25  Aligned_cols=215  Identities=12%  Similarity=0.005  Sum_probs=156.5

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC-CChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNH-GKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      ..++++||||||+|+||+++++.|+++|++|++++|+. +..+.+.+++  .....++.++.+|++|.+++.++++    
T Consensus        25 ~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~D~~d~~~v~~~~~~~~~  102 (269)
T 4dmm_A           25 PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAI--AAAGGEAFAVKADVSQESEVEALFAAVIE  102 (269)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH--HHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHH--HhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999998843 3344444322  2234578999999999998888776    


Q ss_pred             ---cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                         ++|++|||||.......      ..++.+++|+.++.++++++...   .+..+||++||..+.......       
T Consensus       103 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  175 (269)
T 4dmm_A          103 RWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQ-------  175 (269)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTC-------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCc-------
Confidence               68999999997654321      12378999999999999987432   145799999998643321111       


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCcccccc-ccccCCCccccc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGA-AEMYEDGVMASV  241 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~v  241 (294)
                                      ..|+.+|.+.+.+.+.++.+   .|+++++++||.|.++....   ..... ....+.  ..+.
T Consensus       176 ----------------~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~---~~~~~~~~~~p~--~r~~  234 (269)
T 4dmm_A          176 ----------------ANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSE---LAAEKLLEVIPL--GRYG  234 (269)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCH---HHHHHHGGGCTT--SSCB
T ss_pred             ----------------hhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCccccc---ccHHHHHhcCCC--CCCC
Confidence                            78999999999999988876   48999999999998776321   11100 011111  2278


Q ss_pred             cHHHHHHHHHhhhcCc---CCCCeE-Eeec
Q 043792          242 DLRFYVDAHICVFEDV---SSYGRY-LCFN  267 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~---~~~~~~-~~~~  267 (294)
                      +++|+|++++.++..+   ..+|+. .+.+
T Consensus       235 ~~~dvA~~v~~l~s~~~~~~itG~~i~vdG  264 (269)
T 4dmm_A          235 EAAEVAGVVRFLAADPAAAYITGQVINIDG  264 (269)
T ss_dssp             CHHHHHHHHHHHHHCGGGGGCCSCEEEEST
T ss_pred             CHHHHHHHHHHHhCCcccCCCcCCEEEECC
Confidence            8999999999999763   235664 4444

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.94  E-value=4.6e-26  Score=190.89  Aligned_cols=219  Identities=12%  Similarity=0.013  Sum_probs=157.9

Q ss_pred             CCCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           22 SSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        22 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      ...+++++|||||+|+||+++++.|+++|++|++++|+.+..+.+..++  .....++.++.+|++|.+++.++++    
T Consensus        24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  101 (270)
T 3ftp_A           24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAF--KQAGLEGRGAVLNVNDATAVDALVESTLK  101 (270)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH--HHHTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence            3456789999999999999999999999999999999876665554432  2234578899999999998888776    


Q ss_pred             ---cCCEEEecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHS----T--YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                         ++|++|||||......    .  ..++.+++|+.++.++++++...   .+..+||++||..+.. +...    .  
T Consensus       102 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-~~~~----~--  174 (270)
T 3ftp_A          102 EFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSA-GNPG----Q--  174 (270)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH-CCTT----B--
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCC-CCCC----c--
Confidence               6899999998754321    1  12378999999999999987532   1446899999986432 2111    1  


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCcccccccccc--CCCcccc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMY--EDGVMAS  240 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~--~~~~~~~  240 (294)
                                      ..|+.+|.+.+.+.+.++.+   .|+++++++||.|.++....   +.......+  ......+
T Consensus       175 ----------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~---~~~~~~~~~~~~~p~~r~  235 (270)
T 3ftp_A          175 ----------------VNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKG---LPQEQQTALKTQIPLGRL  235 (270)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHH---SCHHHHHHHHTTCTTCSC
T ss_pred             ----------------hhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhh---cCHHHHHHHHhcCCCCCC
Confidence                            78999999999999998877   48999999999997664111   100000000  0111227


Q ss_pred             ccHHHHHHHHHhhhcCc--CCCCeE-Eeecc
Q 043792          241 VDLRFYVDAHICVFEDV--SSYGRY-LCFNH  268 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~--~~~~~~-~~~~~  268 (294)
                      .+++|+|++++.++...  ..+|+. .+.++
T Consensus       236 ~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  266 (270)
T 3ftp_A          236 GSPEDIAHAVAFLASPQAGYITGTTLHVNGG  266 (270)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCHHHHHHHHHHHhCCCcCCccCcEEEECCC
Confidence            89999999999998643  335664 44443

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.94  E-value=1.1e-25  Score=186.30  Aligned_cols=216  Identities=12%  Similarity=0.034  Sum_probs=158.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++|+|+||||+|+||+++++.|+++|++|++++|+.+..+.+..++  .....++.++.+|++|+++++++++      
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (247)
T 3lyl_A            3 LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSM--KEKGFKARGLVLNISDIESIQNFFAEIKAEN   80 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH--HHTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999877666555432  2234578999999999999888775      


Q ss_pred             -cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                       ++|+|||||+.......      ..+..+++|+.++.++++++.+.   .+..++|++||..+.......         
T Consensus        81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  151 (247)
T 3lyl_A           81 LAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQ---------  151 (247)
T ss_dssp             CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTC---------
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCc---------
Confidence             47999999997654321      12378999999999999887543   145699999998643221111         


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccC--CCcccccc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYE--DGVMASVD  242 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~--~~~~~~v~  242 (294)
                                    ..|+.+|.+.+.+.+.++.+   .++++++++||.+.++......   ......+.  .....+.+
T Consensus       152 --------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~  214 (247)
T 3lyl_A          152 --------------TNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLT---DEQKSFIATKIPSGQIGE  214 (247)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSC---HHHHHHHHTTSTTCCCBC
T ss_pred             --------------HHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhcc---HHHHHHHhhcCCCCCCcC
Confidence                          78999999999999988876   4899999999999877632211   11001111  11123889


Q ss_pred             HHHHHHHHHhhhcCcC--CCCeE-Eeec
Q 043792          243 LRFYVDAHICVFEDVS--SYGRY-LCFN  267 (294)
Q Consensus       243 v~D~a~~i~~~~~~~~--~~~~~-~~~~  267 (294)
                      ++|+|++++.++....  .+|+. .+.+
T Consensus       215 ~~dva~~i~~l~s~~~~~~tG~~i~vdg  242 (247)
T 3lyl_A          215 PKDIAAAVAFLASEEAKYITGQTLHVNG  242 (247)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHHhCCCcCCccCCEEEECC
Confidence            9999999999986543  35664 4444

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.94  E-value=2.1e-25  Score=188.66  Aligned_cols=233  Identities=12%  Similarity=-0.030  Sum_probs=161.1

Q ss_pred             CCCCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC------------hhhHHHHHhhccCCCCeEEEECCCCC
Q 043792           21 DSSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK------------LQCIEEELINYNEEKKLKVFQADPFD   88 (294)
Q Consensus        21 ~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------------~~~l~~~~~~~~~~~~v~~~~~Dl~~   88 (294)
                      |...++++||||||+|+||+++++.|+++|++|++++|+...            .+....+  ......++.++.+|++|
T Consensus         5 m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~D~~~   82 (287)
T 3pxx_A            5 MGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLE--VEKTGRKAYTAEVDVRD   82 (287)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHH--HHHTTSCEEEEECCTTC
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHH--HHhcCCceEEEEccCCC
Confidence            445668999999999999999999999999999999987321            1222221  12235678999999999


Q ss_pred             hhHHHHHhc-------cCCEEEecCCCCCCC----CcchhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCC
Q 043792           89 YHSLVNALK-------GCSGLFYSFEPPSDH----STYDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNN  156 (294)
Q Consensus        89 ~~~~~~~~~-------~~d~Vih~a~~~~~~----~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~  156 (294)
                      .+++.++++       ++|++||||+.....    ....+..+++|+.++.++++++... .+..++|++||..++....
T Consensus        83 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~  162 (287)
T 3pxx_A           83 RAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAA  162 (287)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccccc
Confidence            999888776       689999999975432    1222488999999999999999876 2345899999986433221


Q ss_pred             CCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc---cc----
Q 043792          157 HRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP---YL----  226 (294)
Q Consensus       157 ~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~---~~----  226 (294)
                      ..      +..+..+....      ..|+.+|.+.+.+.+.++.+.   |+++++++||.|.++.......   +.    
T Consensus       163 ~~------~~~~~~~~~~~------~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~  230 (287)
T 3pxx_A          163 QP------PGAGGPQGPGG------AGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLE  230 (287)
T ss_dssp             CC------C-----CHHHH------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSS
T ss_pred             cc------ccccccCCCcc------chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccc
Confidence            11      22222221122      679999999999999998775   8999999999999887432100   00    


Q ss_pred             cccc-------cccCCCccccccHHHHHHHHHhhhcCc--CCCCeEEeec
Q 043792          227 KGAA-------EMYEDGVMASVDLRFYVDAHICVFEDV--SSYGRYLCFN  267 (294)
Q Consensus       227 ~~~~-------~~~~~~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~  267 (294)
                      ....       .........+.+++|+|++++.++...  ..+|+.+..+
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vd  280 (287)
T 3pxx_A          231 APSRADALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVD  280 (287)
T ss_dssp             SCCHHHHHHHGGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             cchhHHHHhhhhhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeEC
Confidence            0000       011111133899999999999998654  3457644433

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.94  E-value=4.3e-25  Score=182.78  Aligned_cols=213  Identities=16%  Similarity=0.070  Sum_probs=157.4

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++|++|||||+|+||+++++.|+++|++|++++|+.+..+.+.+++     ..+..++.+|++|+++++++++     
T Consensus         6 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~~   80 (248)
T 3op4_A            6 NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL-----GDNGKGMALNVTNPESIEAVLKAITDE   80 (248)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cccceEEEEeCCCHHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999876666555532     2357889999999999888876     


Q ss_pred             --cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                        ++|++||||+.......      ..++.+++|+.++.++++++.+.   .+..++|++||..+.......        
T Consensus        81 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~--------  152 (248)
T 3op4_A           81 FGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQ--------  152 (248)
T ss_dssp             HCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC--------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCC--------
Confidence              68999999997654321      12378999999999999987542   155799999998643321111        


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCcccccccc-c-cCCCccccc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAE-M-YEDGVMASV  241 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~-~-~~~~~~~~v  241 (294)
                                     ..|+.+|.+.+.+.+.++.+   +|+++++++||.+..+......   ..... . .......+.
T Consensus       153 ---------------~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~p~~r~~  214 (248)
T 3op4_A          153 ---------------ANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALN---DEQRTATLAQVPAGRLG  214 (248)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSC---HHHHHHHHHTCTTCSCB
T ss_pred             ---------------hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcC---HHHHHHHHhcCCCCCCc
Confidence                           78999999999999988876   4899999999999877632111   10000 0 011112388


Q ss_pred             cHHHHHHHHHhhhcCcC--CCCeEEee
Q 043792          242 DLRFYVDAHICVFEDVS--SYGRYLCF  266 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~~--~~~~~~~~  266 (294)
                      +++|+|++++.++....  .+|+.+..
T Consensus       215 ~p~dva~~v~~L~s~~~~~itG~~i~v  241 (248)
T 3op4_A          215 DPREIASAVAFLASPEAAYITGETLHV  241 (248)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             CHHHHHHHHHHHcCCccCCccCcEEEE
Confidence            99999999999986543  35665433

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.94  E-value=6e-25  Score=186.11  Aligned_cols=216  Identities=14%  Similarity=0.073  Sum_probs=157.6

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCCh-hhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKL-QCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      .++++||||||+|+||+++++.|+++|++|++++|+.... +.+.+.  ......++.++.+|++|++++.++++     
T Consensus        45 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  122 (291)
T 3ijr_A           45 LKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQY--VEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ  122 (291)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH--HHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHH--HHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999987532 223221  22334578999999999998888775     


Q ss_pred             --cCCEEEecCCCCCCCC-----c--chhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS-----T--YDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~-----~--~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                        ++|++||||+......     .  ..++.+++|+.++.++++++.+. ....++|++||..++......         
T Consensus       123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  193 (291)
T 3ijr_A          123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNETL---------  193 (291)
T ss_dssp             HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTTC---------
T ss_pred             cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCCC---------
Confidence              5799999998754322     1  12388999999999999999875 233589999998643322111         


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccc-cccCC--Cccccc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAA-EMYED--GVMASV  241 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~-~~~~~--~~~~~v  241 (294)
                                    ..|+.+|.+.+.+.+.++.+.   |+++.+++||.|+++....   ...... ..+..  ....+.
T Consensus       194 --------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~---~~~~~~~~~~~~~~p~~r~~  256 (291)
T 3ijr_A          194 --------------IDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPS---SFDEKKVSQFGSNVPMQRPG  256 (291)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHH---HSCHHHHHHTTTTSTTSSCB
T ss_pred             --------------hhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccc---cCCHHHHHHHHccCCCCCCc
Confidence                          679999999999999988775   8999999999998875211   111110 11111  112278


Q ss_pred             cHHHHHHHHHhhhcCcC--CCCeEEeec
Q 043792          242 DLRFYVDAHICVFEDVS--SYGRYLCFN  267 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~~--~~~~~~~~~  267 (294)
                      +++|+|++++.++....  .+|+.+..+
T Consensus       257 ~p~dvA~~v~~L~s~~~~~itG~~i~vd  284 (291)
T 3ijr_A          257 QPYELAPAYVYLASSDSSYVTGQMIHVN  284 (291)
T ss_dssp             CGGGTHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             CHHHHHHHHHHHhCCccCCCcCCEEEEC
Confidence            89999999999986543  456654433

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.94  E-value=5.1e-25  Score=185.44  Aligned_cols=222  Identities=15%  Similarity=0.012  Sum_probs=160.6

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ...+++||||||+|+||+++++.|+++|++|++++|+.+..+.+..++  .....++.++.+|++|++++.++++     
T Consensus         5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (280)
T 3tox_A            5 RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEI--AGGGGEAAALAGDVGDEALHEALVELAVRR   82 (280)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHH--TTTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH--HhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999877666655532  2345678999999999998888775     


Q ss_pred             --cCCEEEecCCCCCCCC-------cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS-------TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~-------~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                        ++|++|||||......       ...+..+++|+.++.++++++...   .+..++|++||..+...+...    .  
T Consensus        83 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----~--  156 (280)
T 3tox_A           83 FGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAG----V--  156 (280)
T ss_dssp             HSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTT----C--
T ss_pred             cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCC----c--
Confidence              6899999999653211       112378999999999999987543   245699999997533111111    1  


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccc-ccc--CCCccc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAA-EMY--EDGVMA  239 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~-~~~--~~~~~~  239 (294)
                                      ..|+.+|.+.+.+.+.++.+.   |+++++++||.+.++............. ..+  ......
T Consensus       157 ----------------~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r  220 (280)
T 3tox_A          157 ----------------APYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKR  220 (280)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSS
T ss_pred             ----------------hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCC
Confidence                            679999999999999998774   8999999999999886321000000000 001  011123


Q ss_pred             cccHHHHHHHHHhhhcCcC--CCCeE-Eeecc
Q 043792          240 SVDLRFYVDAHICVFEDVS--SYGRY-LCFNH  268 (294)
Q Consensus       240 ~v~v~D~a~~i~~~~~~~~--~~~~~-~~~~~  268 (294)
                      +.+++|+|++++.++....  .+|+. .+.++
T Consensus       221 ~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG  252 (280)
T 3tox_A          221 IARPEEIAEAALYLASDGASFVTGAALLADGG  252 (280)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhCccccCCcCcEEEECCC
Confidence            8899999999999997643  45664 45443

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.94  E-value=1.7e-25  Score=185.77  Aligned_cols=214  Identities=16%  Similarity=0.087  Sum_probs=138.1

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++++||||||+|+||+++++.|+++|++|++++|+.+..+.+.+++  .....++.++.+|++|++++.++++     
T Consensus         6 ~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (253)
T 3qiv_A            6 RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQI--VADGGTAISVAVDVSDPESAKAMADRTLAE   83 (253)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--HHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHH--HhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            446789999999999999999999999999999999877666655532  2234578899999999998888876     


Q ss_pred             --cCCEEEecCCCCCC---------CCcchhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSD---------HSTYDELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPT  162 (294)
Q Consensus        98 --~~d~Vih~a~~~~~---------~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~  162 (294)
                        ++|+|||||+....         .....+..+++|+.++.++++++.    +. +..+||++||..++.   ..    
T Consensus        84 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~---~~----  155 (253)
T 3qiv_A           84 FGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKR-GGGAIVNQSSTAAWL---YS----  155 (253)
T ss_dssp             HSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEEEECC--------------
T ss_pred             cCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCCEEEEECCccccC---CC----
Confidence              68999999987321         111123789999999777766654    44 557999999986321   11    


Q ss_pred             CCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc--cccccccccCC-C
Q 043792          163 SHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP--YLKGAAEMYED-G  236 (294)
Q Consensus       163 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~--~~~~~~~~~~~-~  236 (294)
                                         ..|+.+|.+.+.+.+.++.+.   ++++++++||.++++.......  ..+   ..... .
T Consensus       156 -------------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~---~~~~~~~  213 (253)
T 3qiv_A          156 -------------------NYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVD---DIVKGLP  213 (253)
T ss_dssp             -----------------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC----------------------------
T ss_pred             -------------------chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHH---HHhccCC
Confidence                               569999999999999998875   7999999999999886322110  000   01111 1


Q ss_pred             ccccccHHHHHHHHHhhhcCcCC--CCe-EEeecc
Q 043792          237 VMASVDLRFYVDAHICVFEDVSS--YGR-YLCFNH  268 (294)
Q Consensus       237 ~~~~v~v~D~a~~i~~~~~~~~~--~~~-~~~~~~  268 (294)
                      ...+.+++|+|++++.++.....  .|+ |.+.++
T Consensus       214 ~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG  248 (253)
T 3qiv_A          214 LSRMGTPDDLVGMCLFLLSDEASWITGQIFNVDGG  248 (253)
T ss_dssp             ------CCHHHHHHHHHHSGGGTTCCSCEEEC---
T ss_pred             CCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence            12277899999999999865432  566 445443

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.94  E-value=2.8e-25  Score=183.94  Aligned_cols=205  Identities=16%  Similarity=0.082  Sum_probs=148.1

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ++++|+||||+|+||+++++.|+++|  ++|++++|+.+..+.+.+   .  ...++.++.+|++|.+++.++++     
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~---~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS---I--KDSRVHVLPLTVTCDKSLDTFVSKVGEI   76 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT---C--CCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh---c--cCCceEEEEeecCCHHHHHHHHHHHHHh
Confidence            36899999999999999999999999  999999998766555543   2  24578999999999998888876     


Q ss_pred             ----cCCEEEecCCCCC-CC----Cc--chhhhHhHhhHHHHHHHHHHHhc---C------C-----CcEEEEecCccee
Q 043792           98 ----GCSGLFYSFEPPS-DH----ST--YDELTAEVETMAAHNVLEACAQT---N------T-----VDKVVFTSSLTAV  152 (294)
Q Consensus        98 ----~~d~Vih~a~~~~-~~----~~--~~~~~~~~n~~~~~~ll~~~~~~---~------~-----~~~~v~~Ss~~~~  152 (294)
                          ++|+|||||+... ..    ..  ..+..+++|+.++.++++++...   .      +     .++||++||..+.
T Consensus        77 ~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~  156 (250)
T 1yo6_A           77 VGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS  156 (250)
T ss_dssp             HGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred             cCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccc
Confidence                7999999998755 11    11  12378999999999999887543   1      2     5799999998632


Q ss_pred             eeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCcccccc
Q 043792          153 VWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGA  229 (294)
Q Consensus       153 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~  229 (294)
                      . +...         +..+..+.      ..|+.+|.+.+.+++.++.+.   +++++++|||.+.++....        
T Consensus       157 ~-~~~~---------~~~~~~~~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--------  212 (250)
T 1yo6_A          157 I-TDNT---------SGSAQFPV------LAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK--------  212 (250)
T ss_dssp             S-TTCC---------STTSSSCB------HHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---------------
T ss_pred             c-CCcc---------cccccCCc------cHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC--------
Confidence            2 1110         11111112      679999999999999988775   8999999999997665210        


Q ss_pred             ccccCCCccccccHHHHHHHHHhhhcCcC--CCCeEEee
Q 043792          230 AEMYEDGVMASVDLRFYVDAHICVFEDVS--SYGRYLCF  266 (294)
Q Consensus       230 ~~~~~~~~~~~v~v~D~a~~i~~~~~~~~--~~~~~~~~  266 (294)
                              ..+++++|+|+.++.++..+.  .+|+|+..
T Consensus       213 --------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~  243 (250)
T 1yo6_A          213 --------NAALTVEQSTAELISSFNKLDNSHNGRFFMR  243 (250)
T ss_dssp             --------------HHHHHHHHHHHTTCCGGGTTCEEET
T ss_pred             --------CCCCCHHHHHHHHHHHHhcccccCCCeEEEE
Confidence                    137889999999999997654  35676543

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.94  E-value=2.2e-25  Score=191.51  Aligned_cols=238  Identities=11%  Similarity=0.002  Sum_probs=169.1

Q ss_pred             CCCCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecC----------CCChhhHHHHHhhccCCCCeEEEECCCCChh
Q 043792           21 DSSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHN----------HGKLQCIEEELINYNEEKKLKVFQADPFDYH   90 (294)
Q Consensus        21 ~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~----------~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~   90 (294)
                      |...++++||||||+|+||+++++.|+++|++|++++|+          .+..+.+.+++  .....++.++.+|++|.+
T Consensus        22 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dv~d~~   99 (322)
T 3qlj_A           22 MGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEI--TAAGGEAVADGSNVADWD   99 (322)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHH--HHTTCEEEEECCCTTSHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHH--HhcCCcEEEEECCCCCHH
Confidence            445667899999999999999999999999999999987          34444444432  223457889999999999


Q ss_pred             HHHHHhc-------cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc----C--C---CcEEEEecC
Q 043792           91 SLVNALK-------GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT----N--T---VDKVVFTSS  148 (294)
Q Consensus        91 ~~~~~~~-------~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~----~--~---~~~~v~~Ss  148 (294)
                      ++.++++       ++|++|||||.......      ..++.+++|+.++.++++++...    +  +   -.+||++||
T Consensus       100 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS  179 (322)
T 3qlj_A          100 QAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSS  179 (322)
T ss_dssp             HHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcC
Confidence            9888776       68999999997654321      12378999999999999987543    0  0   148999999


Q ss_pred             cceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCcc
Q 043792          149 LTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPY  225 (294)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~  225 (294)
                      ..+.......                       ..|+.+|.+.+.+.+.++.+   +|+++++++|| +..+....   .
T Consensus       180 ~~~~~~~~~~-----------------------~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~---~  232 (322)
T 3qlj_A          180 GAGLQGSVGQ-----------------------GNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTET---V  232 (322)
T ss_dssp             HHHHHCBTTC-----------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCC---S
T ss_pred             HHHccCCCCC-----------------------ccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchh---h
Confidence            8643321111                       68999999999999999877   58999999999 65544211   1


Q ss_pred             ccccccccCCCccccccHHHHHHHHHhhhcCcC--CCCe-EEeeccc------------------ccHHHHHHHHHHHhC
Q 043792          226 LKGAAEMYEDGVMASVDLRFYVDAHICVFEDVS--SYGR-YLCFNHV------------------INCNEDAMKLARMLL  284 (294)
Q Consensus       226 ~~~~~~~~~~~~~~~v~v~D~a~~i~~~~~~~~--~~~~-~~~~~~~------------------~s~~~~~~~~~~~~~  284 (294)
                      ..... ........+++++|+|++++.++....  .+|+ +.+.++.                  +++.|+++.+.+.++
T Consensus       233 ~~~~~-~~~~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~  311 (322)
T 3qlj_A          233 FAEMM-ATQDQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLG  311 (322)
T ss_dssp             CCC---------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHH
T ss_pred             hhhhh-hccccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhh
Confidence            11111 011122236789999999999986543  3565 4444432                  267999999999888


Q ss_pred             CCCC
Q 043792          285 PPSD  288 (294)
Q Consensus       285 ~~~~  288 (294)
                      .+.+
T Consensus       312 ~~~~  315 (322)
T 3qlj_A          312 KARP  315 (322)
T ss_dssp             HSCC
T ss_pred             ccCC
Confidence            5543

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.94  E-value=2.5e-25  Score=185.15  Aligned_cols=215  Identities=15%  Similarity=0.030  Sum_probs=152.9

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++|+||||||+|+||+++++.|+++|++|++++|+.+. +.+.++  .    .. .++.+|++|++++.++++     
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~--~----~~-~~~~~D~~~~~~~~~~~~~~~~~   74 (256)
T 2d1y_A            3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEA--I----GG-AFFQVDLEDERERVRFVEEAAYA   74 (256)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHH--H----TC-EEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHH--h----hC-CEEEeeCCCHHHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999998766 444442  1    14 788999999998887775     


Q ss_pred             --cCCEEEecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS----T--YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                        ++|+|||||+......    .  ..++.+++|+.++.++++++.+.   .+.+++|++||..+.. +...    .   
T Consensus        75 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-~~~~----~---  146 (256)
T 2d1y_A           75 LGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLF-AEQE----N---  146 (256)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS-BCTT----B---
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccC-CCCC----C---
Confidence              5799999998754321    1  12378999999999999887542   2568999999986322 1111    1   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCC-ccc-cccc-cccC--CCcc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISN-PYL-KGAA-EMYE--DGVM  238 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~-~~~-~~~~-~~~~--~~~~  238 (294)
                                     ..|+.+|.+.+.+.+.++.+.   ++++++++||.+.++...... ... .... ..+.  ....
T Consensus       147 ---------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (256)
T 2d1y_A          147 ---------------AAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALR  211 (256)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTS
T ss_pred             ---------------hhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCC
Confidence                           679999999999999988764   899999999999766411000 000 0010 0010  1112


Q ss_pred             ccccHHHHHHHHHhhhcCcC--CCCe-EEeecc
Q 043792          239 ASVDLRFYVDAHICVFEDVS--SYGR-YLCFNH  268 (294)
Q Consensus       239 ~~v~v~D~a~~i~~~~~~~~--~~~~-~~~~~~  268 (294)
                      .+++++|+|++++.++..+.  ..|+ +.+.++
T Consensus       212 ~~~~~~dvA~~~~~l~s~~~~~~~G~~~~v~gG  244 (256)
T 2d1y_A          212 RLGKPEEVAEAVLFLASEKASFITGAILPVDGG  244 (256)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHhCchhcCCCCCEEEECCC
Confidence            38999999999999987642  3565 455444

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.94  E-value=1e-24  Score=180.74  Aligned_cols=214  Identities=14%  Similarity=0.017  Sum_probs=148.4

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC-CChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNH-GKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      .++++||||||+|+||+++++.|+++|++|++++|+. +..+..     ......++.++.+|++|++++.++++     
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (249)
T 2ew8_A            5 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAA-----IRNLGRRVLTVKCDVSQPGDVEAFGKQVIST   79 (249)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHH-----HHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHH-----HHhcCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence            4568999999999999999999999999999999987 433321     11123578999999999998887764     


Q ss_pred             --cCCEEEecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHH----HhcCCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS----T--YDELTAEVETMAAHNVLEAC----AQTNTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                        ++|+|||||+......    .  ..++.+++|+.++.++++++    ++. +.+++|++||..++......       
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~-------  151 (249)
T 2ew8_A           80 FGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN-GWGRIINLTSTTYWLKIEAY-------  151 (249)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGGSCCSSC-------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCeEEEEEcchhhccCCCCc-------
Confidence              6899999999754321    1  12378999999988888874    444 56799999998633211111       


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCC-CCCcccccc-ccccCCCcccc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVT-ISNPYLKGA-AEMYEDGVMAS  240 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~-~~~~~~~~~-~~~~~~~~~~~  240 (294)
                                      ..|+.+|.+.+.+.+.++.+   .|+++++++||.+.++... ....-.... .... .....+
T Consensus       152 ----------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~  214 (249)
T 2ew8_A          152 ----------------THYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNML-QAIPRL  214 (249)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTT-SSSCSC
T ss_pred             ----------------hhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHHHhh-CccCCC
Confidence                            67999999999999998876   4899999999999887632 100000000 0110 111238


Q ss_pred             ccHHHHHHHHHhhhcCc--CCCCeEE-eec
Q 043792          241 VDLRFYVDAHICVFEDV--SSYGRYL-CFN  267 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~--~~~~~~~-~~~  267 (294)
                      .+++|+|++++.++...  ...|+.+ +.+
T Consensus       215 ~~p~dva~~~~~l~s~~~~~~tG~~~~vdG  244 (249)
T 2ew8_A          215 QVPLDLTGAAAFLASDDASFITGQTLAVDG  244 (249)
T ss_dssp             CCTHHHHHHHHHHTSGGGTTCCSCEEEESS
T ss_pred             CCHHHHHHHHHHHcCcccCCCCCcEEEECC
Confidence            89999999999998653  2356644 444

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.94  E-value=2.2e-25  Score=185.41  Aligned_cols=218  Identities=12%  Similarity=0.059  Sum_probs=159.4

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..+++++|||||+|+||+++++.|+++|++|++++|+.+..+.+.+++  .....++.++.+|++|.+++.++++     
T Consensus         9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   86 (256)
T 3gaf_A            9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAI--RQAGGKAIGLECNVTDEQHREAVIKAALDQ   86 (256)
T ss_dssp             CCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHH--HHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999876666555432  2335678999999999998888775     


Q ss_pred             --cCCEEEecCCCCCCCC---c--chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS---T--YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~---~--~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                        ++|++||||+......   .  ..+..+++|+.++.++++++.+.   .+..++|++||..++......         
T Consensus        87 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  157 (256)
T 3gaf_A           87 FGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRM---------  157 (256)
T ss_dssp             HSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTC---------
T ss_pred             cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCc---------
Confidence              6899999998754322   1  12378999999999999987532   255799999998643211111         


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccc--cccC-CCccccc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAA--EMYE-DGVMASV  241 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~--~~~~-~~~~~~v  241 (294)
                                    ..|+.+|.+.+.+.+.++.+.   ++++.+++||.+.++....   ......  .... .....+.
T Consensus       158 --------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~---~~~~~~~~~~~~~~p~~r~~  220 (256)
T 3gaf_A          158 --------------ASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALAT---VLTPEIERAMLKHTPLGRLG  220 (256)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHH---HCCHHHHHHHHTTCTTSSCB
T ss_pred             --------------hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhh---ccCHHHHHHHHhcCCCCCCC
Confidence                          789999999999999988774   8999999999998764210   111000  0111 1112288


Q ss_pred             cHHHHHHHHHhhhcCcC--CCCe-EEeecc
Q 043792          242 DLRFYVDAHICVFEDVS--SYGR-YLCFNH  268 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~~--~~~~-~~~~~~  268 (294)
                      +++|+|++++.++....  .+|+ +.+.++
T Consensus       221 ~~~dva~~~~~L~s~~~~~itG~~i~vdgG  250 (256)
T 3gaf_A          221 EAQDIANAALFLCSPAAAWISGQVLTVSGG  250 (256)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHcCCcccCccCCEEEECCC
Confidence            99999999999986543  3566 455443

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.94  E-value=8.8e-25  Score=183.16  Aligned_cols=218  Identities=17%  Similarity=0.057  Sum_probs=157.0

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC-CChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNH-GKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      ..++|++|||||+|+||+++++.|+++|++|++++++. +..+.+.++  +.....++.++.+|++|++++.++++    
T Consensus        28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  105 (271)
T 3v2g_A           28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSE--IEQAGGRAVAIRADNRDAEAIEQAIRETVE  105 (271)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH--HHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH--HHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            35678999999999999999999999999999987764 333444332  22235678999999999999888876    


Q ss_pred             ---cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                         ++|++||||+.......      ..++.+++|+.++.++++++.+. ....++|++||..+...+...    .    
T Consensus       106 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~~~----~----  177 (271)
T 3v2g_A          106 ALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWPG----I----  177 (271)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCSTT----C----
T ss_pred             HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCCCC----c----
Confidence               68999999997553321      12378999999999999998766 234689999996432211111    1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHH
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLR  244 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~  244 (294)
                                    ..|+.+|.+.+.+.+.++.+.   |+++.+++||.|.++.........+......+.  ..+..++
T Consensus       178 --------------~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~r~~~pe  241 (271)
T 3v2g_A          178 --------------SLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHAEAQRERIAT--GSYGEPQ  241 (271)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSHHHHHHTCTT--SSCBCHH
T ss_pred             --------------hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhHHHHHhcCCC--CCCCCHH
Confidence                          789999999999999988774   899999999999887643211111100011111  1278899


Q ss_pred             HHHHHHHhhhcCc--CCCCeEEee
Q 043792          245 FYVDAHICVFEDV--SSYGRYLCF  266 (294)
Q Consensus       245 D~a~~i~~~~~~~--~~~~~~~~~  266 (294)
                      |+|++++.++...  ..+|+.+..
T Consensus       242 dvA~~v~fL~s~~~~~itG~~i~v  265 (271)
T 3v2g_A          242 DIAGLVAWLAGPQGKFVTGASLTI  265 (271)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHHHHHHHhCcccCCccCCEEEe
Confidence            9999999998643  345664433

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.94  E-value=4.1e-25  Score=184.23  Aligned_cols=217  Identities=13%  Similarity=0.037  Sum_probs=155.9

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHh-------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNAL-------   96 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~-------   96 (294)
                      .++|+||||||+|+||+++++.|+++|++|++++|+.+..+.+.+++  .....++.++.+|++|++++.+++       
T Consensus         7 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (260)
T 2ae2_A            7 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQW--RSKGFKVEASVCDLSSRSERQELMNTVANHF   84 (260)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--HHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999876555444422  122446889999999999888877       


Q ss_pred             -ccCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           97 -KGCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        97 -~~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                       .++|+|||||+......      ...+..+++|+.++.++++++...   .+.+++|++||..+..... .    .   
T Consensus        85 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-~----~---  156 (260)
T 2ae2_A           85 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVP-Y----E---  156 (260)
T ss_dssp             TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCT-T----C---
T ss_pred             CCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCC-C----c---
Confidence             36899999999754321      112378999999999999988532   2568999999975322111 1    1   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCcccccc--cc---cc--CCC
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGA--AE---MY--EDG  236 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~--~~---~~--~~~  236 (294)
                                     ..|+.+|.+.+.+.+.++.+.   ++++++++||.+.++....   .....  ..   .+  ...
T Consensus       157 ---------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~~~~~~~  218 (260)
T 2ae2_A          157 ---------------AVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEM---TIQDPEQKENLNKLIDRCA  218 (260)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHH---HTTSHHHHHHHHHHHHTST
T ss_pred             ---------------chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhh---hccChhhHHHHHHHHhcCC
Confidence                           679999999999999988774   8999999999998764110   10000  00   00  011


Q ss_pred             ccccccHHHHHHHHHhhhcCcC--CCCeE-Eeecc
Q 043792          237 VMASVDLRFYVDAHICVFEDVS--SYGRY-LCFNH  268 (294)
Q Consensus       237 ~~~~v~v~D~a~~i~~~~~~~~--~~~~~-~~~~~  268 (294)
                      ...+++++|+|++++.++....  ..|+. .+.++
T Consensus       219 ~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  253 (260)
T 2ae2_A          219 LRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGG  253 (260)
T ss_dssp             TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence            1238899999999999886542  35664 44443

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.94  E-value=2.2e-25  Score=186.56  Aligned_cols=218  Identities=14%  Similarity=0.062  Sum_probs=153.1

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++.......++.++.+|++|++++.++++      
T Consensus        11 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   90 (267)
T 1iy8_A           11 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   90 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999876555444432111114578899999999999888876      


Q ss_pred             -cCCEEEecCCCCCC-CC------cchhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSD-HS------TYDELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 -~~d~Vih~a~~~~~-~~------~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                       ++|+|||||+.... ..      ...++.+++|+.++.++++++.    +. +.+++|++||..+......     .  
T Consensus        91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~-----~--  162 (267)
T 1iy8_A           91 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ-GSGMVVNTASVGGIRGIGN-----Q--  162 (267)
T ss_dssp             SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSBCSS-----B--
T ss_pred             CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEEcchhhccCCCC-----C--
Confidence             57999999987543 11      1123789999999887766553    44 5679999999863221111     1  


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCC-----Cccccccc-cccC-C
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTIS-----NPYLKGAA-EMYE-D  235 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~-----~~~~~~~~-~~~~-~  235 (294)
                                      ..|+.+|.+.+.+.+.++.+   +|+++++++||.++++.....     ........ .... .
T Consensus       163 ----------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (267)
T 1iy8_A          163 ----------------SGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVN  226 (267)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTC
T ss_pred             ----------------ccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccC
Confidence                            68999999999999988866   489999999999987652110     00000000 0000 0


Q ss_pred             CccccccHHHHHHHHHhhhcCc--CCCCeEEe
Q 043792          236 GVMASVDLRFYVDAHICVFEDV--SSYGRYLC  265 (294)
Q Consensus       236 ~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~  265 (294)
                      ....+.+++|+|++++.++..+  ...|+.+.
T Consensus       227 p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~  258 (267)
T 1iy8_A          227 PSKRYGEAPEIAAVVAFLLSDDASYVNATVVP  258 (267)
T ss_dssp             TTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred             CCCCCcCHHHHHHHHHHHcCccccCCCCCEEE
Confidence            1123789999999999998654  23566443

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.94  E-value=2.7e-25  Score=187.77  Aligned_cols=217  Identities=12%  Similarity=0.017  Sum_probs=153.9

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++++|+||||+|+||+++++.|+++|++|++++|+.++.+.+.+++  .....++.++.+|++|.+++.++++     
T Consensus        41 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l--~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  118 (285)
T 2c07_A           41 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEI--KSFGYESSGYAGDVSKKEEISEVINKILTE  118 (285)
T ss_dssp             CCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHH--HTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHH--HhcCCceeEEECCCCCHHHHHHHHHHHHHh
Confidence            345689999999999999999999999999999888765555444422  2224578899999999999888874     


Q ss_pred             --cCCEEEecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHHHh----cCCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS----T--YDELTAEVETMAAHNVLEACAQ----TNTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                        ++|+|||||+......    .  ..+..+++|+.++.++++++.+    . +.++||++||..++. +...    .  
T Consensus       119 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~-~~~~----~--  190 (285)
T 2c07_A          119 HKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN-RYGRIINISSIVGLT-GNVG----Q--  190 (285)
T ss_dssp             CSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-TCEEEEEECCTHHHH-CCTT----C--
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCEEEEECChhhcc-CCCC----C--
Confidence              5899999998754321    1  1237899999998888887653    4 567999999986432 2111    1  


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc-cccccccccCCCccccc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP-YLKGAAEMYEDGVMASV  241 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~v  241 (294)
                                      ..|+.+|.+.+.+.+.++.+.   +++++++|||.+.++....... .........+.  ..++
T Consensus       191 ----------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~~~~  252 (285)
T 2c07_A          191 ----------------ANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPA--GRMG  252 (285)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTT--SSCB
T ss_pred             ----------------chHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHHHHHHHHhhCCC--CCCC
Confidence                            679999999999999888664   8999999999998876321110 00000001111  2288


Q ss_pred             cHHHHHHHHHhhhcCcC--CCCeE-Eeec
Q 043792          242 DLRFYVDAHICVFEDVS--SYGRY-LCFN  267 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~~--~~~~~-~~~~  267 (294)
                      +++|+|++++.++..+.  ..|+. .+.+
T Consensus       253 ~~~dvA~~~~~l~~~~~~~~~G~~i~v~g  281 (285)
T 2c07_A          253 TPEEVANLACFLSSDKSGYINGRVFVIDG  281 (285)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CHHHHHHHHHHHhCCCcCCCCCCEEEeCC
Confidence            99999999999987543  35654 4444

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.94  E-value=5e-26  Score=188.02  Aligned_cols=215  Identities=14%  Similarity=0.073  Sum_probs=151.0

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEE-ecCCCChhhHHHHHhhccCCCCeEE-EECCCCChhHHHHHhc------
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAA-LHNHGKLQCIEEELINYNEEKKLKV-FQADPFDYHSLVNALK------   97 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~l~~~~~~~~~~~~v~~-~~~Dl~~~~~~~~~~~------   97 (294)
                      ||+|+||||+|+||++++++|+++|++|+++ +|+.+..+.+.+++  .....++.. +.+|++|.+++.++++      
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEA--RRRGSPLVAVLGANLLEAEAATALVHQAAEVL   78 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHH--HHTTCSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH--HhcCCceEEEEeccCCCHHHHHHHHHHHHHhc
Confidence            4789999999999999999999999999998 77765554444322  112345666 8999999998887764      


Q ss_pred             -cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHH----HhcCCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEAC----AQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                       ++|+|||+|+......      ...+..+++|+.++.++++++    ++. +.++||++||..+.. +...    .   
T Consensus        79 ~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~-~~~~----~---  149 (245)
T 2ph3_A           79 GGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKA-RFGRIVNITSVVGIL-GNPG----Q---  149 (245)
T ss_dssp             TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCTHHHH-CCSS----B---
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc-CCCEEEEEeChhhcc-CCCC----C---
Confidence             6899999999754321      112378999999966665554    445 678999999975322 2111    1   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc-cccccccccCCCcccccc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP-YLKGAAEMYEDGVMASVD  242 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~v~  242 (294)
                                     ..|+.+|.+.+.+.+.++.+.   +++++++|||.++++....... .........  ....+++
T Consensus       150 ---------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~--~~~~~~~  212 (245)
T 2ph3_A          150 ---------------ANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQEVKEAYLKQI--PAGRFGR  212 (245)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHTC--TTCSCBC
T ss_pred             ---------------cchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHHHHHHHHhcC--CCCCCcC
Confidence                           679999999999999888764   8999999999998875211100 000000001  1123889


Q ss_pred             HHHHHHHHHhhhcCcC--CCCe-EEeecc
Q 043792          243 LRFYVDAHICVFEDVS--SYGR-YLCFNH  268 (294)
Q Consensus       243 v~D~a~~i~~~~~~~~--~~~~-~~~~~~  268 (294)
                      ++|+|++++.++..+.  ..|+ +.+.++
T Consensus       213 ~~dva~~~~~l~~~~~~~~~G~~~~v~gg  241 (245)
T 2ph3_A          213 PEEVAEAVAFLVSEKAGYITGQTLCVDGG  241 (245)
T ss_dssp             HHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHHhCcccccccCCEEEECCC
Confidence            9999999999987643  3465 555554

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.94  E-value=4.2e-25  Score=183.54  Aligned_cols=214  Identities=14%  Similarity=0.005  Sum_probs=152.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++     ..++.++.+|++|++++.++++      
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (254)
T 1hdc_A            3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDWQRVVAYAREEF   77 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            35689999999999999999999999999999999875555444311     2468899999999999888876      


Q ss_pred             -cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHH----HHhcCCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEA----CAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~----~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                       ++|++||||+......      ...+..+++|+.++.++.++    +++. +.++||++||..++.....     .   
T Consensus        78 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~-----~---  148 (254)
T 1hdc_A           78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA-GGGSIVNISSAAGLMGLAL-----T---  148 (254)
T ss_dssp             SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCTT-----C---
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECchhhccCCCC-----c---
Confidence             6899999999754321      11237899999999865554    4455 5689999999863221111     1   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCC-CccccccccccCCCccccc-
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTIS-NPYLKGAAEMYEDGVMASV-  241 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~v-  241 (294)
                                     ..|+.+|.+.+.+.+.++.+   .+++++++|||.++++..... ...........+.  ..+. 
T Consensus       149 ---------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~--~~~~~  211 (254)
T 1hdc_A          149 ---------------SSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPM--GRVGN  211 (254)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTT--SSCB-
T ss_pred             ---------------hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccchhHHHHHHhcCCC--CCCCC
Confidence                           68999999999999998876   489999999999988752110 0010000000111  1267 


Q ss_pred             cHHHHHHHHHhhhcCc--CCCCeEE-eecc
Q 043792          242 DLRFYVDAHICVFEDV--SSYGRYL-CFNH  268 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~--~~~~~~~-~~~~  268 (294)
                      +++|+|++++.++..+  ...|+++ +.++
T Consensus       212 ~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  241 (254)
T 1hdc_A          212 EPGEIAGAVVKLLSDTSSYVTGAELAVDGG  241 (254)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHhCchhcCCCCCEEEECCC
Confidence            9999999999998754  2356644 4443

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.94  E-value=1.1e-25  Score=187.64  Aligned_cols=218  Identities=14%  Similarity=0.019  Sum_probs=155.8

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++  .....++.++.+|++|.+++.++++      
T Consensus        12 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (260)
T 2zat_A           12 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATL--QGEGLSVTGTVCHVGKAEDRERLVAMAVNLH   89 (260)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--HHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45689999999999999999999999999999999876555444322  2224578899999999998887775      


Q ss_pred             -cCCEEEecCCCCCCC-----Cc--chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDH-----ST--YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~-----~~--~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                       ++|+|||||+.....     ..  ..++.+++|+.++.++++++.+.   .+.++||++||..++.... .    .   
T Consensus        90 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-~----~---  161 (260)
T 2zat_A           90 GGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFP-N----L---  161 (260)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT-T----B---
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCC-C----c---
Confidence             689999999864311     11  12378999999999998887532   2668999999986322111 0    1   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccc-cccCC--Ccccc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAA-EMYED--GVMAS  240 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~-~~~~~--~~~~~  240 (294)
                                     ..|+.+|.+.+.+.+.++.+.   ++++++++||.+.++.....  ...... ..+..  ....+
T Consensus       162 ---------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~  224 (260)
T 2zat_A          162 ---------------GPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVL--WMDKARKEYMKESLRIRRL  224 (260)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHH--HSSHHHHHHHHHHHTCSSC
T ss_pred             ---------------hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhc--ccChHHHHHHHhcCCCCCC
Confidence                           689999999999999988764   89999999999987752110  000000 00000  11238


Q ss_pred             ccHHHHHHHHHhhhcCcC--CCCe-EEeecc
Q 043792          241 VDLRFYVDAHICVFEDVS--SYGR-YLCFNH  268 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~~--~~~~-~~~~~~  268 (294)
                      .+++|+|++++.++..+.  ..|+ +.+.++
T Consensus       225 ~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG  255 (260)
T 2zat_A          225 GNPEDCAGIVSFLCSEDASYITGETVVVGGG  255 (260)
T ss_dssp             BCGGGGHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CCHHHHHHHHHHHcCcccCCccCCEEEECCC
Confidence            899999999999987543  2565 555443

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.94  E-value=3e-25  Score=185.11  Aligned_cols=219  Identities=13%  Similarity=0.038  Sum_probs=152.4

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC-hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK-LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      ++|+||||||+|+||+++++.|+++|++|++++|+.+. .+.+.+++.. ....++.++.+|++|++++.++++      
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAA-QHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHH-HHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHh-ccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            46899999999999999999999999999999998765 4444432211 013468899999999998888775      


Q ss_pred             -cCCEEEecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS----T--YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                       ++|++||||+......    .  ..+..+++|+.++.++++++.+.   .+.++||++||..++.....     .    
T Consensus        82 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----~----  152 (260)
T 1x1t_A           82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASAN-----K----  152 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-----C----
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCC-----C----
Confidence             5899999999754321    1  12378999999999998887542   15679999999863221111     1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc-ccc--c----cc--cc-c-
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP-YLK--G----AA--EM-Y-  233 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~-~~~--~----~~--~~-~-  233 (294)
                                    ..|+.+|.+.+.+.+.++.+.   ++++++++||.+.++....... ...  +    ..  .. . 
T Consensus       153 --------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (260)
T 1x1t_A          153 --------------SAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSE  218 (260)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHH
T ss_pred             --------------chHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhc
Confidence                          689999999999999988764   8999999999999886321100 000  0    00  00 0 


Q ss_pred             CCCccccccHHHHHHHHHhhhcCc--CCCCeE-Eeec
Q 043792          234 EDGVMASVDLRFYVDAHICVFEDV--SSYGRY-LCFN  267 (294)
Q Consensus       234 ~~~~~~~v~v~D~a~~i~~~~~~~--~~~~~~-~~~~  267 (294)
                      ......+.+++|+|++++.++...  ...|+. .+.+
T Consensus       219 ~~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdg  255 (260)
T 1x1t_A          219 KQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDG  255 (260)
T ss_dssp             HCTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cCCCCCCcCHHHHHHHHHHHhChhhcCCCCCEEEECC
Confidence            001123889999999999998654  235664 4444

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.94  E-value=3.8e-25  Score=183.93  Aligned_cols=216  Identities=12%  Similarity=0.023  Sum_probs=153.3

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------   97 (294)
                      ++|+||||||+|+||+++++.|+++|++|++++|+.+  +...++  ......++.++.+|++|++++.++++       
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~--l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   78 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAE--IARHGVKAVHHPADLSDVAQIEALFALAEREFG   78 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHH--HHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHH--HHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999999876  323222  22224568899999999999988886       


Q ss_pred             cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHH----HhcCCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEAC----AQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                      ++|+|||||+......      ...+..+++|+.++.++.+++    ++. +.++||++||..++.... .    .    
T Consensus        79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~-~----~----  148 (255)
T 2q2v_A           79 GVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRAR-NWGRIINIASVHGLVGST-G----K----  148 (255)
T ss_dssp             SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCGGGTSCCT-T----B----
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEcCchhccCCC-C----c----
Confidence            7899999999754321      112378999999887777765    444 668999999986322111 1    1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCC---ccccc-c----ccc-c-C
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISN---PYLKG-A----AEM-Y-E  234 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~---~~~~~-~----~~~-~-~  234 (294)
                                    ..|+.+|.+.+.+.+.++.+.   ++++++++||.++++......   ....+ .    ... . .
T Consensus       149 --------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (255)
T 2q2v_A          149 --------------AAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEK  214 (255)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTT
T ss_pred             --------------hhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhcc
Confidence                          679999999999999988774   799999999999887521100   00000 0    001 1 1


Q ss_pred             CCccccccHHHHHHHHHhhhcCcC--CCCe-EEeecc
Q 043792          235 DGVMASVDLRFYVDAHICVFEDVS--SYGR-YLCFNH  268 (294)
Q Consensus       235 ~~~~~~v~v~D~a~~i~~~~~~~~--~~~~-~~~~~~  268 (294)
                      .....+++++|+|++++.++..+.  ..|+ +.+.++
T Consensus       215 ~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  251 (255)
T 2q2v_A          215 QPSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGG  251 (255)
T ss_dssp             CTTCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECCC
Confidence            112238999999999999887543  3465 445443

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.94  E-value=6.4e-25  Score=188.23  Aligned_cols=212  Identities=17%  Similarity=0.026  Sum_probs=148.0

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ...+++||||||+|+||+++++.|+++|++|++++|+.++.+.+..++.......++.++.+|++|.+++.++++     
T Consensus         5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   84 (319)
T 3ioy_A            5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR   84 (319)
T ss_dssp             CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            456789999999999999999999999999999999987766655533222222378999999999999888876     


Q ss_pred             --cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---------CCCcEEEEecCcceeeeCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---------NTVDKVVFTSSLTAVVWNNHRDN  160 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---------~~~~~~v~~Ss~~~~~~~~~~~~  160 (294)
                        ++|+||||||......      ...+..+++|+.|+.++++++...         ++..+||++||..++......  
T Consensus        85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~--  162 (319)
T 3ioy_A           85 FGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSP--  162 (319)
T ss_dssp             TCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSS--
T ss_pred             CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCC--
Confidence              4699999999754332      112378999999999999987654         024589999998643321111  


Q ss_pred             CCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc---cccccc----
Q 043792          161 PTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP---YLKGAA----  230 (294)
Q Consensus       161 ~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~---~~~~~~----  230 (294)
                                           ..|+.||.+.+.+.+.++.+   .|+++++++||.|.++.......   ...+..    
T Consensus       163 ---------------------~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  221 (319)
T 3ioy_A          163 ---------------------GIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVD  221 (319)
T ss_dssp             ---------------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC----------------------
T ss_pred             ---------------------HHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchh
Confidence                                 67999999777777766544   48999999999998876432211   111111    


Q ss_pred             -cccC---CCccccccHHHHHHHHHhhhcCc
Q 043792          231 -EMYE---DGVMASVDLRFYVDAHICVFEDV  257 (294)
Q Consensus       231 -~~~~---~~~~~~v~v~D~a~~i~~~~~~~  257 (294)
                       ....   ......++++|+|++++.+++++
T Consensus       222 ~~~~~~~~~~~~~~~~pe~vA~~~~~al~~~  252 (319)
T 3ioy_A          222 KTAVERLAGVHEFGMEPDVIGARVIEAMKAN  252 (319)
T ss_dssp             -------CCGGGSSBCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhhhcCCCHHHHHHHHHHHHHcC
Confidence             0001   11111389999999999999874

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.94  E-value=2.3e-25  Score=189.60  Aligned_cols=214  Identities=15%  Similarity=0.054  Sum_probs=154.3

Q ss_pred             CCCCCCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-
Q 043792           19 GYDSSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-   97 (294)
Q Consensus        19 ~~~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-   97 (294)
                      ..|....+++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++  .....++.++.+|++|.+++.++++ 
T Consensus        24 ~~m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l--~~~~~~~~~~~~Dv~d~~~v~~~~~~  101 (301)
T 3tjr_A           24 GFLSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGL--RGQGFDAHGVVCDVRHLDEMVRLADE  101 (301)
T ss_dssp             CCCCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--HHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             hHHhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH--HhcCCceEEEEccCCCHHHHHHHHHH
Confidence            3344466789999999999999999999999999999999887666655432  2234578999999999999888875 


Q ss_pred             ------cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc----CCCcEEEEecCcceeeeCCCCCCC
Q 043792           98 ------GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT----NTVDKVVFTSSLTAVVWNNHRDNP  161 (294)
Q Consensus        98 ------~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~  161 (294)
                            ++|+||||||......      ...+..+++|+.++.++++++...    +...+||++||..++.....    
T Consensus       102 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----  177 (301)
T 3tjr_A          102 AFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAG----  177 (301)
T ss_dssp             HHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTT----
T ss_pred             HHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCC----
Confidence                  6899999999764321      112378999999999999987543    22469999999864321111    


Q ss_pred             CCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc------cccccc-c
Q 043792          162 TSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP------YLKGAA-E  231 (294)
Q Consensus       162 ~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~------~~~~~~-~  231 (294)
                       .                  ..|+.||.+.+.+.+.++.+.   |+++++++||.|.++.......      .....+ .
T Consensus       178 -~------------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  238 (301)
T 3tjr_A          178 -L------------------GTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEG  238 (301)
T ss_dssp             -B------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC------------
T ss_pred             -c------------------hHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhh
Confidence             1                  789999999999999888764   8999999999997664211000      000000 1


Q ss_pred             ccCC--CccccccHHHHHHHHHhhhcCc
Q 043792          232 MYED--GVMASVDLRFYVDAHICVFEDV  257 (294)
Q Consensus       232 ~~~~--~~~~~v~v~D~a~~i~~~~~~~  257 (294)
                      .++.  ....+++++|+|++++.+++++
T Consensus       239 ~~~~~~~~~~~~~pedvA~~i~~~l~~~  266 (301)
T 3tjr_A          239 AFGPLPTQDESVSADDVARLTADAILAN  266 (301)
T ss_dssp             ----------CCCHHHHHHHHHHHHHHT
T ss_pred             hccccccccCCCCHHHHHHHHHHHHhcC
Confidence            1111  1123899999999999999865

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.94  E-value=3.2e-25  Score=186.36  Aligned_cols=215  Identities=12%  Similarity=-0.013  Sum_probs=153.9

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++++|+||||+|+||+++++.|+++|++|++++|+.+..+.+.+++  .. ..++.++.+|++|++++.++++     
T Consensus        26 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l--~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (276)
T 2b4q_A           26 SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRL--SA-YGDCQAIPADLSSEAGARRLAQALGEL  102 (276)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH--TT-SSCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--Hh-cCceEEEEeeCCCHHHHHHHHHHHHHh
Confidence            456789999999999999999999999999999999876555554432  11 1268889999999998888775     


Q ss_pred             --cCCEEEecCCCCCCC------CcchhhhHhHhhHHHHHHHHHHHhc---CCC----cEEEEecCcceeeeCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDH------STYDELTAEVETMAAHNVLEACAQT---NTV----DKVVFTSSLTAVVWNNHRDNPT  162 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~------~~~~~~~~~~n~~~~~~ll~~~~~~---~~~----~~~v~~Ss~~~~~~~~~~~~~~  162 (294)
                        ++|+|||||+.....      ....+..+++|+.++.++++++...   .+.    ++||++||..++... ..    
T Consensus       103 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~-~~----  177 (276)
T 2b4q_A          103 SARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAM-GE----  177 (276)
T ss_dssp             CSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCC-CC----
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCC-CC----
Confidence              589999999865432      1112378999999998888876532   133    799999998632211 11    


Q ss_pred             CCCCCCCCCCChhhhhhccc-hhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCcccccc-cccc---C
Q 043792          163 SHDFDERNWSDVNLCKKFKL-WHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGA-AEMY---E  234 (294)
Q Consensus       163 ~~~~~e~~~~~~~~~~~~~~-~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~-~~~~---~  234 (294)
                      .                  . .|+.+|.+.+.+.+.++.+   .++++++++||.+.++....   ..... ....   .
T Consensus       178 ~------------------~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~---~~~~~~~~~~~~~~  236 (276)
T 2b4q_A          178 Q------------------AYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRH---IANDPQALEADSAS  236 (276)
T ss_dssp             S------------------CTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHH---HHHCHHHHHHHHHT
T ss_pred             C------------------ccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhh---cchhHHHHHHhhcC
Confidence            1                  4 7999999999999998876   48999999999998775211   11100 0000   0


Q ss_pred             CCccccccHHHHHHHHHhhhcCc--CCCCeEEee
Q 043792          235 DGVMASVDLRFYVDAHICVFEDV--SSYGRYLCF  266 (294)
Q Consensus       235 ~~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~  266 (294)
                      .....+.+++|+|++++.++..+  ...|+.+..
T Consensus       237 ~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~v  270 (276)
T 2b4q_A          237 IPMGRWGRPEEMAALAISLAGTAGAYMTGNVIPI  270 (276)
T ss_dssp             STTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             CCCCCcCCHHHHHHHHHHHhCccccCCCCCEEEe
Confidence            11123889999999999998754  235664433

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.94  E-value=4.1e-25  Score=184.81  Aligned_cols=239  Identities=14%  Similarity=0.018  Sum_probs=150.8

Q ss_pred             CCCCCC-cccccccccCccCCCCCCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC-CChhhHHHHHhhccCCCC
Q 043792            1 MAPPAS-SGIEEEIAVDRDGYDSSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNH-GKLQCIEEELINYNEEKK   78 (294)
Q Consensus         1 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~l~~~~~~~~~~~~   78 (294)
                      |-||++ +...+....+.....+..+++++|||||+|+||+++++.|+++|++|++.+++. +..+.+.++  ......+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~--~~~~~~~   78 (267)
T 3u5t_A            1 MHHHHHHSSGVDLGTENLYFQSMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGK--IEAAGGK   78 (267)
T ss_dssp             --------------------------CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHH--HHHTTCC
T ss_pred             CCCccccccccccccccccccccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH--HHhcCCe
Confidence            456644 333333333332222234578999999999999999999999999999986544 344444432  2223457


Q ss_pred             eEEEECCCCChhHHHHHhc-------cCCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc-CCCcEEE
Q 043792           79 LKVFQADPFDYHSLVNALK-------GCSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT-NTVDKVV  144 (294)
Q Consensus        79 v~~~~~Dl~~~~~~~~~~~-------~~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v  144 (294)
                      +.++.+|++|++++.++++       ++|++|||||........      .++.+++|+.++.++++++.+. ....++|
T Consensus        79 ~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv  158 (267)
T 3u5t_A           79 ALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRII  158 (267)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred             EEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEE
Confidence            8999999999998888775       579999999976433211      1377889999999999988765 1225899


Q ss_pred             EecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCC
Q 043792          145 FTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTI  221 (294)
Q Consensus       145 ~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~  221 (294)
                      ++||..+.......                       ..|+.+|.+.+.+.+.++.+.   |+++.+++||.+..+....
T Consensus       159 ~isS~~~~~~~~~~-----------------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  215 (267)
T 3u5t_A          159 NMSTSQVGLLHPSY-----------------------GIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLE  215 (267)
T ss_dssp             EECCTHHHHCCTTC-----------------------HHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC------
T ss_pred             EEeChhhccCCCCc-----------------------hHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccc
Confidence            99998643321111                       689999999999999999875   7999999999998775221


Q ss_pred             CCcccccccccc-C-CCccccccHHHHHHHHHhhhcCcC--CCCeEEee
Q 043792          222 SNPYLKGAAEMY-E-DGVMASVDLRFYVDAHICVFEDVS--SYGRYLCF  266 (294)
Q Consensus       222 ~~~~~~~~~~~~-~-~~~~~~v~v~D~a~~i~~~~~~~~--~~~~~~~~  266 (294)
                      ...  ......+ . .....+..++|+|++++.++....  .+|+.+..
T Consensus       216 ~~~--~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~v  262 (267)
T 3u5t_A          216 GKS--DEVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDGAWVNGQVLRA  262 (267)
T ss_dssp             -------CHHHHHTSSTTCSCBCHHHHHHHHHHHHSTTTTTCCSEEEEE
T ss_pred             cCC--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEe
Confidence            110  0000011 0 111227889999999999986543  36765443

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.94  E-value=3.4e-25  Score=185.89  Aligned_cols=217  Identities=15%  Similarity=0.057  Sum_probs=155.4

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..+++++|||||+|+||+++++.|+++|++|++++|+. ..+.+..+  ......++.++.+|++|.+++.++.+     
T Consensus        28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~--~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  104 (273)
T 3uf0_A           28 SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD-GVKEVADE--IADGGGSAEAVVADLADLEGAANVAEELAAT  104 (273)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST-HHHHHHHH--HHTTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHH-HHHHHHHH--HHhcCCcEEEEEecCCCHHHHHHHHHHHHhc
Confidence            45678999999999999999999999999999999663 33333332  23345678999999999988877654     


Q ss_pred             -cCCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                       ++|++|||||........      .++.+++|+.++.++++++...   .+..++|++||..++......         
T Consensus       105 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~---------  175 (273)
T 3uf0_A          105 RRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNV---------  175 (273)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSC---------
T ss_pred             CCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCC---------
Confidence             689999999976543211      1378999999999999987432   155799999998643211111         


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc---cccccccccCCCccccc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP---YLKGAAEMYEDGVMASV  241 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~---~~~~~~~~~~~~~~~~v  241 (294)
                                    ..|+.+|.+.+.+.+.++.+   .|+++++++||.|+++.......   .........+.  ..+.
T Consensus       176 --------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--~r~~  239 (273)
T 3uf0_A          176 --------------AAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPA--GRWA  239 (273)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTT--SSCB
T ss_pred             --------------hhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCC--CCCC
Confidence                          68999999999999999877   58999999999998775211000   00000001111  2278


Q ss_pred             cHHHHHHHHHhhhcCc--CCCCeEE-eec
Q 043792          242 DLRFYVDAHICVFEDV--SSYGRYL-CFN  267 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~--~~~~~~~-~~~  267 (294)
                      +++|+|++++.++...  ..+|+.+ +.+
T Consensus       240 ~pedva~~v~~L~s~~a~~itG~~i~vdG  268 (273)
T 3uf0_A          240 TPEDMVGPAVFLASDAASYVHGQVLAVDG  268 (273)
T ss_dssp             CGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CHHHHHHHHHHHhCchhcCCcCCEEEECc
Confidence            8999999999998754  3467644 444

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.94  E-value=3.9e-25  Score=184.08  Aligned_cols=217  Identities=17%  Similarity=0.104  Sum_probs=156.3

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEE-ecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAA-LHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      ++++||||||+|+||+++++.|+++|++|+++ .|+.+..+.+..++  .....++.++.+|++|.++++++++      
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEI--EKLGVKVLVVKANVGQPAKIKEMFQQIDETF   80 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH--HTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH--HhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999997 67765555554432  2335579999999999998888875      


Q ss_pred             -cCCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                       ++|++||||+........      .+..+++|+.++.++++++.+.   .+..+||++||.+++......         
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~---------  151 (258)
T 3oid_A           81 GRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENY---------  151 (258)
T ss_dssp             SCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTC---------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCc---------
Confidence             469999999864432211      1378999999999999987533   255799999998643221111         


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc---cccccccccCCCccccc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP---YLKGAAEMYEDGVMASV  241 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~---~~~~~~~~~~~~~~~~v  241 (294)
                                    ..|+.+|.+.+.+.+.++.+.   ++++.+++||.+.++.......   .........  ....+.
T Consensus       152 --------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--p~~r~~  215 (258)
T 3oid_A          152 --------------TTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNT--PAGRMV  215 (258)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHC--TTSSCB
T ss_pred             --------------HHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcC--CCCCCc
Confidence                          789999999999999998774   7999999999998765221110   000000011  112288


Q ss_pred             cHHHHHHHHHhhhcCcC--CCCeE-Eeecc
Q 043792          242 DLRFYVDAHICVFEDVS--SYGRY-LCFNH  268 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~~--~~~~~-~~~~~  268 (294)
                      +++|+|++++.++....  .+|+. .+.++
T Consensus       216 ~~~dva~~v~~L~s~~~~~itG~~i~vdGG  245 (258)
T 3oid_A          216 EIKDMVDTVEFLVSSKADMIRGQTIIVDGG  245 (258)
T ss_dssp             CHHHHHHHHHHHTSSTTTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence            99999999999997643  45664 45443

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.94  E-value=2e-25  Score=187.69  Aligned_cols=217  Identities=14%  Similarity=0.034  Sum_probs=157.0

Q ss_pred             CCCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           22 SSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        22 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      +..+++++|||||+|+||+++++.|+++|++|++++|+.+..+.+..+     ...++.++.+|++|.+++.++++    
T Consensus        23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~Dv~d~~~v~~~~~~~~~   97 (277)
T 4dqx_A           23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANE-----IGSKAFGVRVDVSSAKDAESMVEKTTA   97 (277)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-----HCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-----hCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            345678999999999999999999999999999999987665555442     23578999999999998888776    


Q ss_pred             ---cCCEEEecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHS----T--YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                         ++|++|||||......    .  ..++.+++|+.++.++++++...   .+..++|++||..++.....     .  
T Consensus        98 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----~--  170 (277)
T 4dqx_A           98 KWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIAD-----R--  170 (277)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTT-----B--
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCC-----C--
Confidence               6899999999754321    1  12378899999999998887543   24569999999863321111     1  


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCcccc-ccc-cc---cC--C
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLK-GAA-EM---YE--D  235 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~-~~~-~~---~~--~  235 (294)
                                      ..|+.+|.+.+.+.+.++.+.   |+++++++||.+.++.....  ... ... ..   +.  .
T Consensus       171 ----------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~~~  232 (277)
T 4dqx_A          171 ----------------TAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKI--FAEAKDPAKLRSDFNARA  232 (277)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHH--HHTCSCHHHHHHHHHTTS
T ss_pred             ----------------hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhh--cccccchhHHHHHHHhcC
Confidence                            789999999999999988774   89999999999976641000  000 000 00   11  1


Q ss_pred             CccccccHHHHHHHHHhhhcCcC--CCCeE-Eeecc
Q 043792          236 GVMASVDLRFYVDAHICVFEDVS--SYGRY-LCFNH  268 (294)
Q Consensus       236 ~~~~~v~v~D~a~~i~~~~~~~~--~~~~~-~~~~~  268 (294)
                      ....+.+++|+|++++.++....  .+|+. .+.++
T Consensus       233 ~~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  268 (277)
T 4dqx_A          233 VMDRMGTAEEIAEAMLFLASDRSRFATGSILTVDGG  268 (277)
T ss_dssp             TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             cccCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCc
Confidence            11227899999999999987543  35664 44443

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.94  E-value=2.3e-25  Score=187.01  Aligned_cols=201  Identities=14%  Similarity=0.008  Sum_probs=151.4

Q ss_pred             CCCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           22 SSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        22 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      ...++++||||||+|+||+++++.|+++|++|++++|+.+..+.+.+++  .....++.++.+|++|.+++.++++    
T Consensus        27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l--~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  104 (272)
T 1yb1_A           27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKC--KGLGAKVHTFVVDCSNREDIYSSAKKVKA  104 (272)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--HHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHH--HhcCCeEEEEEeeCCCHHHHHHHHHHHHH
Confidence            4566789999999999999999999999999999999876555544432  1224578999999999998887775    


Q ss_pred             ---cCCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                         ++|+|||||+........      .+..+++|+.++.++++++...   .+.++||++||..++....         
T Consensus       105 ~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~---------  175 (272)
T 1yb1_A          105 EIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVP---------  175 (272)
T ss_dssp             HTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHH---------
T ss_pred             HCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCC---------
Confidence               689999999976533211      1278999999988887776432   2668999999985321100         


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc------CCeEEEEecCceeCCCCCCCCccccccccccCCCccc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR------GISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMA  239 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~  239 (294)
                              .      ...|+.+|.+.+.+++.++.+.      +++++++|||.+.++...      . ....    ...
T Consensus       176 --------~------~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~------~-~~~~----~~~  230 (272)
T 1yb1_A          176 --------F------LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK------N-PSTS----LGP  230 (272)
T ss_dssp             --------H------HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTT------C-THHH----HCC
T ss_pred             --------C------chhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccc------c-cccc----ccC
Confidence                    0      1679999999999999888764      799999999999877621      0 0000    123


Q ss_pred             cccHHHHHHHHHhhhcCcC
Q 043792          240 SVDLRFYVDAHICVFEDVS  258 (294)
Q Consensus       240 ~v~v~D~a~~i~~~~~~~~  258 (294)
                      +++++|+|++++.++.++.
T Consensus       231 ~~~~~dva~~i~~~~~~~~  249 (272)
T 1yb1_A          231 TLEPEEVVNRLMHGILTEQ  249 (272)
T ss_dssp             CCCHHHHHHHHHHHHHTTC
T ss_pred             CCCHHHHHHHHHHHHHcCC
Confidence            7899999999999997653

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.94  E-value=6.9e-25  Score=184.67  Aligned_cols=219  Identities=13%  Similarity=0.009  Sum_probs=156.3

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .+++++|||||+|+||+++++.|+++|++|++++|+.+..+.+.+++  .....++.++.+|++|.+++.++++      
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l--~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGL--RAAGHDVDGSSCDVTSTDEVHAAVAAAVERF   99 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--HTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            34689999999999999999999999999999999877666555432  2335679999999999998887775      


Q ss_pred             -cCCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHh--c---CCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQ--T---NTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~--~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                       ++|+|||||+........      .++.+++|+.++.++++++.+  .   .+..++|++||..+.......       
T Consensus       100 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~-------  172 (279)
T 3sju_A          100 GPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYA-------  172 (279)
T ss_dssp             CSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTC-------
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCC-------
Confidence             579999999976533211      137789999999999998765  1   255799999998643211111       


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc----c---ccccc-cccC
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP----Y---LKGAA-EMYE  234 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~----~---~~~~~-~~~~  234 (294)
                                      ..|+.+|.+.+.+.+.++.+   +|+++++++||.|.++.......    .   ..... ..+.
T Consensus       173 ----------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (279)
T 3sju_A          173 ----------------APYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFN  236 (279)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHH
T ss_pred             ----------------hhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHH
Confidence                            67999999999999998877   58999999999998764211000    0   00000 0010


Q ss_pred             --CCccccccHHHHHHHHHhhhcCcC--CCCeEEeec
Q 043792          235 --DGVMASVDLRFYVDAHICVFEDVS--SYGRYLCFN  267 (294)
Q Consensus       235 --~~~~~~v~v~D~a~~i~~~~~~~~--~~~~~~~~~  267 (294)
                        .....+.+++|+|++++.++....  .+|+.+..+
T Consensus       237 ~~~p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vd  273 (279)
T 3sju_A          237 AKIPLGRYSTPEEVAGLVGYLVTDAAASITAQALNVC  273 (279)
T ss_dssp             TTCTTSSCBCHHHHHHHHHHHTSSGGGGCCSCEEEES
T ss_pred             hcCCCCCCCCHHHHHHHHHHHhCccccCcCCcEEEEC
Confidence              111227899999999999987543  467644333

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.94  E-value=5e-25  Score=184.92  Aligned_cols=218  Identities=14%  Similarity=0.068  Sum_probs=150.4

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEE-ecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAA-LHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      ++++||||||+|+||+++++.|+++|++|+++ .|+.+..+.+..+  ......++.++.+|++|.+++.++++      
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAA--ITESGGEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH--HHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHH--HHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            46799999999999999999999999999887 4554444444442  22234578999999999998888775      


Q ss_pred             -cCCEEEecCCCCCCCC-------cchhhhHhHhhHHHHHHHHHHHhc------CCCcEEEEecCcceeeeCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS-------TYDELTAEVETMAAHNVLEACAQT------NTVDKVVFTSSLTAVVWNNHRDNPTS  163 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~-------~~~~~~~~~n~~~~~~ll~~~~~~------~~~~~~v~~Ss~~~~~~~~~~~~~~~  163 (294)
                       ++|+|||||+......       ...++.+++|+.++.++++++.+.      ++..+||++||..+.......    .
T Consensus       103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----~  178 (272)
T 4e3z_A          103 GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQ----Y  178 (272)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTT----C
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCC----c
Confidence             5799999999765321       112378999999999999887644      134689999998643321111    1


Q ss_pred             CCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccccccCC-Cccc
Q 043792          164 HDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAAEMYED-GVMA  239 (294)
Q Consensus       164 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~-~~~~  239 (294)
                                        ..|+.+|.+.+.+.+.++.+.   |+++++++||.|.++....... .......... ....
T Consensus       179 ------------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~  239 (272)
T 4e3z_A          179 ------------------VDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGL-PDRAREMAPSVPMQR  239 (272)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------------CCTTSS
T ss_pred             ------------------chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCC-hHHHHHHhhcCCcCC
Confidence                              579999999999999988775   8999999999999886322110 0000011111 1122


Q ss_pred             cccHHHHHHHHHhhhcCcC--CCCe-EEeec
Q 043792          240 SVDLRFYVDAHICVFEDVS--SYGR-YLCFN  267 (294)
Q Consensus       240 ~v~v~D~a~~i~~~~~~~~--~~~~-~~~~~  267 (294)
                      +.+++|+|++++.++....  ..|+ +.+.+
T Consensus       240 ~~~~edvA~~i~~l~s~~~~~~tG~~i~vdg  270 (272)
T 4e3z_A          240 AGMPEEVADAILYLLSPSASYVTGSILNVSG  270 (272)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CcCHHHHHHHHHHHhCCccccccCCEEeecC
Confidence            7789999999999986543  3565 44544

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.93  E-value=3e-25  Score=185.39  Aligned_cols=217  Identities=17%  Similarity=0.039  Sum_probs=155.1

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++|+||||||+|+||+++++.|+++|++|++++|+.+..+.+..+     ...++.++.+|++|.+++.++++      
T Consensus        10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~D~~d~~~v~~~~~~~~~~~   84 (263)
T 3ak4_A           10 LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAG-----LENGGFAVEVDVTKRASVDAAMQKAIDAL   84 (263)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT-----CTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-----HhcCCeEEEEeCCCHHHHHHHHHHHHHHc
Confidence            4568999999999999999999999999999999987555444331     12267889999999999988876      


Q ss_pred             -cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc---CC-CcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT---NT-VDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~---~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                       ++|+|||||+.......      ..+..+++|+.++.++++++.+.   .+ ..++|++||..+..... .    .   
T Consensus        85 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-~----~---  156 (263)
T 3ak4_A           85 GGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAP-L----L---  156 (263)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCT-T----C---
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCC-C----c---
Confidence             68999999997543211      12378999999999999887653   23 57999999975322111 0    1   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCcc---cc----ccc-ccc--
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPY---LK----GAA-EMY--  233 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~---~~----~~~-~~~--  233 (294)
                                     ..|+.+|.+.+.+.+.++.+.   |++++++|||.++++........   ..    ... ..+  
T Consensus       157 ---------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (263)
T 3ak4_A          157 ---------------AHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVS  221 (263)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred             ---------------hhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHh
Confidence                           679999999999999988764   89999999999988752110000   00    000 000  


Q ss_pred             CCCccccccHHHHHHHHHhhhcCc--CCCCe-EEeecc
Q 043792          234 EDGVMASVDLRFYVDAHICVFEDV--SSYGR-YLCFNH  268 (294)
Q Consensus       234 ~~~~~~~v~v~D~a~~i~~~~~~~--~~~~~-~~~~~~  268 (294)
                      ......+++++|+|++++.++..+  ...|+ +.+.++
T Consensus       222 ~~p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  259 (263)
T 3ak4_A          222 LTPLGRIEEPEDVADVVVFLASDAARFMTGQGINVTGG  259 (263)
T ss_dssp             TCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             cCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECcC
Confidence            011123899999999999998754  23565 455443

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.93  E-value=1.1e-25  Score=185.60  Aligned_cols=205  Identities=16%  Similarity=0.032  Sum_probs=151.4

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------cC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------GC   99 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------~~   99 (294)
                      +|+||||||+|+||+++++.|+++|++|++++|+.+ .             .++.++.+|++|++++.++++      ++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   67 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-------------EDLIYVEGDVTREEDVRRAVARAQEEAPL   67 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-------------SSSEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-------------cceEEEeCCCCCHHHHHHHHHHHHhhCCc
Confidence            579999999999999999999999999999999864 1             256899999999999998887      68


Q ss_pred             CEEEecCCCCCCCCc----------chhhhHhHhhHHHHHHHHHHHhc--C-C------CcEEEEecCcceeeeCCCCCC
Q 043792          100 SGLFYSFEPPSDHST----------YDELTAEVETMAAHNVLEACAQT--N-T------VDKVVFTSSLTAVVWNNHRDN  160 (294)
Q Consensus       100 d~Vih~a~~~~~~~~----------~~~~~~~~n~~~~~~ll~~~~~~--~-~------~~~~v~~Ss~~~~~~~~~~~~  160 (294)
                      |+|||+|+.......          ..++.+++|+.++.++++++.+.  . +      .++||++||..++......  
T Consensus        68 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--  145 (242)
T 1uay_A           68 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQ--  145 (242)
T ss_dssp             EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTC--
T ss_pred             eEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCC--
Confidence            999999987543211          23478899999999999988754  1 1      1399999998643211111  


Q ss_pred             CCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc-cccccccccCCC
Q 043792          161 PTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP-YLKGAAEMYEDG  236 (294)
Q Consensus       161 ~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~~~~~~  236 (294)
                                           ..|+.+|.+.+.+.+.++.+.   +++++++|||.++++....... +........+- 
T Consensus       146 ---------------------~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-  203 (242)
T 1uay_A          146 ---------------------AAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPF-  203 (242)
T ss_dssp             ---------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCS-
T ss_pred             ---------------------chhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchhHHHHHHhhCCC-
Confidence                                 789999999999998887664   8999999999999876221110 00000000011 


Q ss_pred             ccccccHHHHHHHHHhhhcCcCCCCe-EEeecc
Q 043792          237 VMASVDLRFYVDAHICVFEDVSSYGR-YLCFNH  268 (294)
Q Consensus       237 ~~~~v~v~D~a~~i~~~~~~~~~~~~-~~~~~~  268 (294)
                      ...+++++|+|++++.++......|+ +.+.++
T Consensus       204 ~~~~~~~~dva~~~~~l~~~~~~~G~~~~v~gG  236 (242)
T 1uay_A          204 PPRLGRPEEYAALVLHILENPMLNGEVVRLDGA  236 (242)
T ss_dssp             SCSCCCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             cccCCCHHHHHHHHHHHhcCCCCCCcEEEEcCC
Confidence            02388999999999999987555676 455443

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.93  E-value=5.9e-25  Score=188.67  Aligned_cols=218  Identities=15%  Similarity=0.064  Sum_probs=148.8

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC--h---hhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK--L---QCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~---~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--   97 (294)
                      ++++||||||+|+||+++++.|+++|++|++.+|+...  .   +.+.+.  ......++.++.+|++|++++.++++  
T Consensus         4 ~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~--~~~~~~~~~~~~~Dvtd~~~v~~~~~~~   81 (324)
T 3u9l_A            4 SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGF--ARDNDVDLRTLELDVQSQVSVDRAIDQI   81 (324)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHH--HHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHH--HHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence            46899999999999999999999999999999987422  1   222221  11224579999999999999988886  


Q ss_pred             -----cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHH----HhcCCCcEEEEecCcceeeeCCCCCCCC
Q 043792           98 -----GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEAC----AQTNTVDKVVFTSSLTAVVWNNHRDNPT  162 (294)
Q Consensus        98 -----~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~  162 (294)
                           ++|+||||||.......      ..+..+++|+.|+.++++++    ++. +.+++|++||.++.......    
T Consensus        82 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~-~~g~iV~isS~~~~~~~~~~----  156 (324)
T 3u9l_A           82 IGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQ-KHGLLIWISSSSSAGGTPPY----  156 (324)
T ss_dssp             HHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCCSS----
T ss_pred             HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEEecchhccCCCCc----
Confidence                 78999999997543221      11378999999999999998    445 66899999998643211111    


Q ss_pred             CCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccc---c---cc
Q 043792          163 SHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAA---E---MY  233 (294)
Q Consensus       163 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~---~---~~  233 (294)
                      .                  ..|+.||.+.+.+.+.++.+   .|+++++++||.|.++.............   .   ..
T Consensus       157 ~------------------~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  218 (324)
T 3u9l_A          157 L------------------APYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAG  218 (324)
T ss_dssp             C------------------HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHT
T ss_pred             c------------------hhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccc
Confidence            1                  67999999999999999877   58999999999998665322111000000   0   00


Q ss_pred             CC-Cc------------cccccHHHHHHHHHhhhcCcCCC-C-eEEeec
Q 043792          234 ED-GV------------MASVDLRFYVDAHICVFEDVSSY-G-RYLCFN  267 (294)
Q Consensus       234 ~~-~~------------~~~v~v~D~a~~i~~~~~~~~~~-~-~~~~~~  267 (294)
                      +. +.            ....+++|+|++++.++..+... . ++.+..
T Consensus       219 ~~~~~~~~~~~~~~~l~~~~~~p~~vA~aiv~~~~~~~~~~~~~~~~gp  267 (324)
T 3u9l_A          219 PNAGLGEEIKKAFAAIVPPDADVSLVADAIVRVVGTASGKRPFRVHVDP  267 (324)
T ss_dssp             TTTTHHHHHHHHHHHTSCTTCCTHHHHHHHHHHHTSCTTCCCSEEEECT
T ss_pred             cccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCCCCeEEEeCC
Confidence            00 00            01258899999999999876432 2 345544

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.93  E-value=1.4e-25  Score=185.26  Aligned_cols=215  Identities=10%  Similarity=0.009  Sum_probs=153.0

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEE-ecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAA-LHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------   97 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------   97 (294)
                      +|+|+||||+|+||++++++|+++|++|+++ .|+.+..+.+.+++  .....++.++.+|++|++++.++++       
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQI--EAYGGQAITFGGDVSKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH--HHHTCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH--HhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            3789999999999999999999999999995 67755544444322  1123468899999999999988876       


Q ss_pred             cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           98 GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                      ++|+|||+|+......      ...++.+++|+.++.++++++.+.   .+.++||++||..+.. +...    .     
T Consensus        79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-~~~~----~-----  148 (244)
T 1edo_A           79 TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLI-GNIG----Q-----  148 (244)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH-CCTT----C-----
T ss_pred             CCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcC-CCCC----C-----
Confidence            5899999999765321      112378999999999999887653   2567999999986432 2111    1     


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-cccccccccCCCccccccHH
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YLKGAAEMYEDGVMASVDLR  244 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~v~v~  244 (294)
                                   ..|+.+|.+.+.+.+.++.+   .+++++++|||.++++....... .........  ....+++++
T Consensus       149 -------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~  213 (244)
T 1edo_A          149 -------------ANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTI--PLGRTGQPE  213 (244)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSC--TTCSCBCHH
T ss_pred             -------------ccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcChHHHHHHhhcC--CCCCCCCHH
Confidence                         67999999999999988876   48999999999998775211110 000000001  112388999


Q ss_pred             HHHHHHHhhhcCc---CCCCe-EEeec
Q 043792          245 FYVDAHICVFEDV---SSYGR-YLCFN  267 (294)
Q Consensus       245 D~a~~i~~~~~~~---~~~~~-~~~~~  267 (294)
                      |+|++++.++..+   ...|+ +.+.+
T Consensus       214 dva~~~~~l~~~~~~~~~~G~~~~v~g  240 (244)
T 1edo_A          214 NVAGLVEFLALSPAASYITGQAFTIDG  240 (244)
T ss_dssp             HHHHHHHHHHHCSGGGGCCSCEEEEST
T ss_pred             HHHHHHHHHhCCCccCCcCCCEEEeCC
Confidence            9999999998433   23465 44444

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.93  E-value=3.3e-24  Score=179.32  Aligned_cols=217  Identities=12%  Similarity=0.038  Sum_probs=155.5

Q ss_pred             CCCCCeEEEeCCCc-hHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           23 SNATKTVCVMDASG-HFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      ..++++||||||+| .||+++++.|+++|++|++++|+.++.+.+..++. .....++.++.+|++|.+++.++++    
T Consensus        19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (266)
T 3o38_A           19 LLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLA-DLGLGRVEAVVCDVTSTEAVDALITQTVE   97 (266)
T ss_dssp             TTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH-TTCSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHH-hcCCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            45678999999998 59999999999999999999998776665555331 1223579999999999998888775    


Q ss_pred             ---cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc----CCCcEEEEecCcceeeeCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT----NTVDKVVFTSSLTAVVWNNHRDNPTSH  164 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~  164 (294)
                         ++|+|||||+.......      ..+..+++|+.++.++++++...    ++..++|++||..++......      
T Consensus        98 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~------  171 (266)
T 3o38_A           98 KAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQ------  171 (266)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTC------
T ss_pred             HhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCC------
Confidence               57999999997554321      11378999999999999987654    244689999997633211111      


Q ss_pred             CCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccc-ccc-C-CCcc
Q 043792          165 DFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAA-EMY-E-DGVM  238 (294)
Q Consensus       165 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~-~~~-~-~~~~  238 (294)
                                       ..|+.+|.+.+.+.+.++.+   .++++++++||.+.++......   .... ..+ . ....
T Consensus       172 -----------------~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~  231 (266)
T 3o38_A          172 -----------------SHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTS---SSELLDRLASDEAFG  231 (266)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--------------------CCTTS
T ss_pred             -----------------chHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccC---cHHHHHHHHhcCCcC
Confidence                             78999999999999998877   5899999999999877632111   1110 111 1 1112


Q ss_pred             ccccHHHHHHHHHhhhcCc--CCCCeEEee
Q 043792          239 ASVDLRFYVDAHICVFEDV--SSYGRYLCF  266 (294)
Q Consensus       239 ~~v~v~D~a~~i~~~~~~~--~~~~~~~~~  266 (294)
                      .+.+++|+|++++.++...  ..+|+++..
T Consensus       232 r~~~~~dva~~i~~l~s~~~~~~tG~~i~v  261 (266)
T 3o38_A          232 RAAEPWEVAATIAFLASDYSSYMTGEVVSV  261 (266)
T ss_dssp             SCCCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             CCCCHHHHHHHHHHHcCccccCccCCEEEE
Confidence            2889999999999998754  345665433

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.93  E-value=9.3e-25  Score=182.98  Aligned_cols=219  Identities=15%  Similarity=0.085  Sum_probs=153.6

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC-ChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG-KLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      ..++++++||||+|+||+++++.|+++|++|++++++.. ..+....+  ......++.++.+|++|.++++++++    
T Consensus        22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   99 (269)
T 3gk3_A           22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMH--ERDAGRDFKAYAVDVADFESCERCAEKVLA   99 (269)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHH--HHTTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHH--HHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            455789999999999999999999999999999985443 33332221  22335679999999999998888775    


Q ss_pred             ---cCCEEEecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHS----T--YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                         ++|+|||||+......    .  ..+..+++|+.++.++++++...   .+..++|++||..+.......       
T Consensus       100 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  172 (269)
T 3gk3_A          100 DFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQ-------  172 (269)
T ss_dssp             HHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTB-------
T ss_pred             HcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCc-------
Confidence               6899999999754322    1  12378999999999999887542   155799999997643321111       


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc-cccccccccCCCccccc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP-YLKGAAEMYEDGVMASV  241 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~v  241 (294)
                                      ..|+.+|.+.+.+.+.++.+.   |+++++++||.+.++....... ...... ........+.
T Consensus       173 ----------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~-~~~~~~~~~~  235 (269)
T 3gk3_A          173 ----------------ANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKI-LPQIPVGRLG  235 (269)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------CCS-GGGCTTSSCB
T ss_pred             ----------------chHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHHHHHh-hhcCCcCCcc
Confidence                            789999999999999888764   8999999999998776322110 111000 0001112278


Q ss_pred             cHHHHHHHHHhhhcCcC--CCCeE-Eeec
Q 043792          242 DLRFYVDAHICVFEDVS--SYGRY-LCFN  267 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~~--~~~~~-~~~~  267 (294)
                      +++|+|++++.++....  .+|+. .+.+
T Consensus       236 ~p~dvA~~v~~L~s~~~~~itG~~i~vdg  264 (269)
T 3gk3_A          236 RPDEVAALIAFLCSDDAGFVTGADLAING  264 (269)
T ss_dssp             CHHHHHHHHHHHTSTTCTTCCSCEEEEST
T ss_pred             CHHHHHHHHHHHhCCCcCCeeCcEEEECC
Confidence            89999999999987643  45664 4444

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.93  E-value=3.5e-25  Score=186.61  Aligned_cols=219  Identities=13%  Similarity=0.064  Sum_probs=156.1

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCC---CeEEEECCCCChhHHHHHhc---
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEK---KLKVFQADPFDYHSLVNALK---   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~---~v~~~~~Dl~~~~~~~~~~~---   97 (294)
                      .+++++|||||+|+||+++++.|+++|++|++++|+.++.+.+.+++  .....   ++.++.+|++|++++.++++   
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (280)
T 1xkq_A            4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQII--LKSGVSEKQVNSVVADVTTEDGQDQIINSTL   81 (280)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--HTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HHcCCCCcceEEEEecCCCHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999876655554432  11222   68999999999998888775   


Q ss_pred             ----cCCEEEecCCCCCCCC----------cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCC
Q 043792           98 ----GCSGLFYSFEPPSDHS----------TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDN  160 (294)
Q Consensus        98 ----~~d~Vih~a~~~~~~~----------~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~  160 (294)
                          ++|+|||||+......          ...++.+++|+.++.++++++...   .+ +++|++||..+.......  
T Consensus        82 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~--  158 (280)
T 1xkq_A           82 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPD--  158 (280)
T ss_dssp             HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCS--
T ss_pred             HhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCc--
Confidence                5899999998754322          112378999999999999987653   14 799999998532211000  


Q ss_pred             CCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCcccc-------ccc
Q 043792          161 PTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLK-------GAA  230 (294)
Q Consensus       161 ~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~-------~~~  230 (294)
                        .                  ..|+.+|.+.+.+.+.++.+   +|+++++++||.++++...... ...       ...
T Consensus       159 --~------------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~  217 (280)
T 1xkq_A          159 --F------------------LYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMG-MPDQASQKFYNFM  217 (280)
T ss_dssp             --S------------------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTT-CCHHHHHHHHHHH
T ss_pred             --c------------------cHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccc-cccccccchHHHH
Confidence              1                  67999999999999998865   5899999999999887521110 000       000


Q ss_pred             -cccC-CCccccccHHHHHHHHHhhhcCc---CCCCeE-Eeecc
Q 043792          231 -EMYE-DGVMASVDLRFYVDAHICVFEDV---SSYGRY-LCFNH  268 (294)
Q Consensus       231 -~~~~-~~~~~~v~v~D~a~~i~~~~~~~---~~~~~~-~~~~~  268 (294)
                       .... .....+.+++|+|++++.++..+   ...|+. .+.++
T Consensus       218 ~~~~~~~p~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG  261 (280)
T 1xkq_A          218 ASHKECIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGG  261 (280)
T ss_dssp             HHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred             HHHHcCCCCCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCC
Confidence             0000 01123889999999999998654   345664 44443

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.93  E-value=6.8e-25  Score=181.41  Aligned_cols=215  Identities=15%  Similarity=0.061  Sum_probs=152.8

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEec-CCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALH-NHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      ++++|+||||+|+||+++++.|+++|++|++++| +.++.+.+.+++  .....++.++.+|++|++++.++++      
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEI--KKLGSDAIAVRADVANAEDVTNMVKQTVDVF   80 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH--HHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH--HhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999999999999999998 554444443322  1224578899999999999888876      


Q ss_pred             -cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                       ++|++||||+......      ...+..+++|+.++.++++++.    +. +.+++|++||..+.. +...    .   
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~-~~~~----~---  151 (246)
T 2uvd_A           81 GQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQ-RHGRIVNIASVVGVT-GNPG----Q---  151 (246)
T ss_dssp             SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCTHHHH-CCTT----B---
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECCHHhcC-CCCC----C---
Confidence             6899999999754321      1123789999999877777654    34 567999999986432 2111    1   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-cccccccccCCCcccccc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YLKGAAEMYEDGVMASVD  242 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~v~  242 (294)
                                     ..|+.+|.+.+.+.+.++.+   +++++++++||.+.++....... .........+  ...+++
T Consensus       152 ---------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p--~~~~~~  214 (246)
T 2uvd_A          152 ---------------ANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAEMLKLIP--AAQFGE  214 (246)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHHHHHHHTCT--TCSCBC
T ss_pred             ---------------chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHHHHHHhcCC--CCCCcC
Confidence                           67999999999998888765   48999999999998775221110 0000000111  123889


Q ss_pred             HHHHHHHHHhhhcCcC--CCCeE-Eeec
Q 043792          243 LRFYVDAHICVFEDVS--SYGRY-LCFN  267 (294)
Q Consensus       243 v~D~a~~i~~~~~~~~--~~~~~-~~~~  267 (294)
                      ++|+|++++.++..+.  ..|+. .+.+
T Consensus       215 ~~dvA~~~~~l~s~~~~~~tG~~~~vdg  242 (246)
T 2uvd_A          215 AQDIANAVTFFASDQSKYITGQTLNVDG  242 (246)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHHcCchhcCCCCCEEEECc
Confidence            9999999999986542  35664 4443

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.93  E-value=1.5e-25  Score=187.80  Aligned_cols=218  Identities=13%  Similarity=0.051  Sum_probs=159.0

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..+++++|||||+|+||+++++.|+++|++|++++|+.+..+.+.+++  .....++.++.+|++|.+++.++++     
T Consensus        23 ~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l--~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  100 (271)
T 4ibo_A           23 DLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEF--RNVGHDAEAVAFDVTSESEIIEAFARLDEQ  100 (271)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHH--HHTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            456799999999999999999999999999999999876665555432  2234578999999999999888876     


Q ss_pred             --cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                        ++|++|||||.......      ..++.+++|+.++.++++++.+.   .+..++|++||..+.......        
T Consensus       101 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~--------  172 (271)
T 4ibo_A          101 GIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATV--------  172 (271)
T ss_dssp             TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTC--------
T ss_pred             CCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCc--------
Confidence              68999999997543321      12378999999999998876543   145799999997643211111        


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccc-cc-ccc--CCCccc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKG-AA-EMY--EDGVMA  239 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~-~~-~~~--~~~~~~  239 (294)
                                     ..|+.+|.+.+.+.+.++.+   +|+++.+++||.+.++..   ...... .. ..+  ......
T Consensus       173 ---------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~---~~~~~~~~~~~~~~~~~p~~r  234 (271)
T 4ibo_A          173 ---------------APYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMN---QALIDNPEFDAWVKARTPAKR  234 (271)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGG---HHHHHCHHHHHHHHHHSTTCS
T ss_pred             ---------------hhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcch---hhcccCHHHHHHHHhcCCCCC
Confidence                           78999999999999998877   589999999999987752   111100 00 000  011122


Q ss_pred             cccHHHHHHHHHhhhcCcC--CCCeE-Eeecc
Q 043792          240 SVDLRFYVDAHICVFEDVS--SYGRY-LCFNH  268 (294)
Q Consensus       240 ~v~v~D~a~~i~~~~~~~~--~~~~~-~~~~~  268 (294)
                      +.+++|+|++++.++....  .+|+. .+.++
T Consensus       235 ~~~pedva~~v~~L~s~~~~~itG~~i~vdGG  266 (271)
T 4ibo_A          235 WGKPQELVGTAVFLSASASDYVNGQIIYVDGG  266 (271)
T ss_dssp             CBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhCccccCCCCcEEEECCC
Confidence            7889999999999886543  45664 44443

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.93  E-value=3.5e-25  Score=185.94  Aligned_cols=224  Identities=15%  Similarity=0.036  Sum_probs=156.9

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHH-CCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           25 ATKTVCVMDASGHFASALVRRLLL-RGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      ++++||||||+|+||+++++.|++ +|++|++++|+.++.+.+.+++  .....++.++.+|++|.+++.++++      
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l--~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   80 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQL--QAEGLSPRFHQLDIDDLQSIRALRDFLRKEY   80 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHH--HHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHH--HhcCCeeEEEECCCCCHHHHHHHHHHHHHhc
Confidence            468999999999999999999999 9999999999876555444432  1224578999999999999888876      


Q ss_pred             -cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCC------CC
Q 043792           98 -GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNP------TS  163 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~------~~  163 (294)
                       ++|+|||||+......      ...+..+++|+.++.++++++.+. ...++||++||..++...... .|      ..
T Consensus        81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~-~~~~~~~~~~  159 (276)
T 1wma_A           81 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSC-SPELQQKFRS  159 (276)
T ss_dssp             SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTS-CHHHHHHHHC
T ss_pred             CCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccC-ChhHHhhccc
Confidence             7899999998754321      112378999999999999999876 112489999998643210000 00      00


Q ss_pred             CCCCCCCCCCh-------------hhhhhccchhHhhHHHHHHHHHHHHHh-------cCCeEEEEecCceeCCCCCCCC
Q 043792          164 HDFDERNWSDV-------------NLCKKFKLWHGLSKTLAEKTAWALAMD-------RGISMVSINGGLVMGPDVTISN  223 (294)
Q Consensus       164 ~~~~e~~~~~~-------------~~~~~~~~~Y~~sK~~~e~~~~~~~~~-------~~~~~~ilrp~~i~G~~~~~~~  223 (294)
                      ..++|+++...             .....+...|+.+|.+.+.+++.++.+       .++++++++||.|.++....  
T Consensus       160 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~--  237 (276)
T 1wma_A          160 ETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP--  237 (276)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT--
T ss_pred             cccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc--
Confidence            01222110000             000011268999999999999888766       48999999999997665210  


Q ss_pred             ccccccccccCCCccccccHHHHHHHHHhhhcCc----CCCCeEEeec
Q 043792          224 PYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDV----SSYGRYLCFN  267 (294)
Q Consensus       224 ~~~~~~~~~~~~~~~~~v~v~D~a~~i~~~~~~~----~~~~~~~~~~  267 (294)
                                    ..+.+++|+|++++.++..+    ..+|+|+..+
T Consensus       238 --------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~~~  271 (276)
T 1wma_A          238 --------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVSEK  271 (276)
T ss_dssp             --------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEETT
T ss_pred             --------------cccCChhHhhhhHhhhhcCcccccccCceEeccC
Confidence                          13788999999999999754    2356666543

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.93  E-value=1.7e-25  Score=179.52  Aligned_cols=185  Identities=13%  Similarity=0.085  Sum_probs=140.5

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc---CCEE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG---CSGL  102 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~---~d~V  102 (294)
                      +|+|+||||+|+||+++++.|+ +|++|++++|+..                   .+.+|++|++++.+++++   +|+|
T Consensus         3 kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~~~~d~v   62 (202)
T 3d7l_A            3 AMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-------------------DVTVDITNIDSIKKMYEQVGKVDAI   62 (202)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-------------------SEECCTTCHHHHHHHHHHHCCEEEE
T ss_pred             CcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-------------------ceeeecCCHHHHHHHHHHhCCCCEE
Confidence            3589999999999999999999 9999999998752                   467899999999988875   7999


Q ss_pred             EecCCCCCCCCc---c---hhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChh
Q 043792          103 FYSFEPPSDHST---Y---DELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVN  175 (294)
Q Consensus       103 ih~a~~~~~~~~---~---~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~  175 (294)
                      ||+|+.......   .   ..+.+++|+.++.++++++.+. ...++||++||..+......     .            
T Consensus        63 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----~------------  125 (202)
T 3d7l_A           63 VSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPIVQ-----G------------  125 (202)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCCTT-----C------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCCCc-----c------------
Confidence            999986543221   1   1267889999999999998765 11268999999753211100     1            


Q ss_pred             hhhhccchhHhhHHHHHHHHHHHHHhc--CCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHHHHHHHHhh
Q 043792          176 LCKKFKLWHGLSKTLAEKTAWALAMDR--GISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICV  253 (294)
Q Consensus       176 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~i~~~  253 (294)
                            ..|+.+|.+.|.+++.++.+.  +++++++||+.++++...    .  +.  ..  ....+++++|+|++++.+
T Consensus       126 ------~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~~----~--~~--~~--~~~~~~~~~dva~~~~~~  189 (202)
T 3d7l_A          126 ------ASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWDK----L--EP--FF--EGFLPVPAAKVARAFEKS  189 (202)
T ss_dssp             ------HHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHHH----H--GG--GS--TTCCCBCHHHHHHHHHHH
T ss_pred             ------HHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCchhh----h--hh--hc--cccCCCCHHHHHHHHHHh
Confidence                  679999999999999988764  899999999999987521    1  00  00  123489999999999988


Q ss_pred             hcCcCCCCe-EE
Q 043792          254 FEDVSSYGR-YL  264 (294)
Q Consensus       254 ~~~~~~~~~-~~  264 (294)
                      +.+ ...|+ |+
T Consensus       190 ~~~-~~~G~~~~  200 (202)
T 3d7l_A          190 VFG-AQTGESYQ  200 (202)
T ss_dssp             HHS-CCCSCEEE
T ss_pred             hhc-cccCceEe
Confidence            854 33443 44

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.93  E-value=2.6e-24  Score=178.36  Aligned_cols=206  Identities=12%  Similarity=-0.027  Sum_probs=142.9

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++|+||||||+|+||+++++.|+++|++|++++|+.+..        .    .++.++.+|++|++++.++++      
T Consensus         5 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~--------~----~~~~~~~~D~~d~~~~~~~~~~~~~~~   72 (250)
T 2fwm_X            5 FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE--------Q----YPFATEVMDVADAAQVAQVCQRLLAET   72 (250)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSS--------C----CSSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhh--------c----CCceEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4568999999999999999999999999999999986421        0    137889999999999988876      


Q ss_pred             -cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                       ++|+|||||+......      ...+..+++|+.++.++++++.    +. +.+++|++||..+......     .   
T Consensus        73 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~~~~~-----~---  143 (250)
T 2fwm_X           73 ERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQ-RGGAIVTVASDAAHTPRIG-----M---  143 (250)
T ss_dssp             SCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCCTT-----C---
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhc-CCCEEEEECchhhCCCCCC-----C---
Confidence             6899999998754321      1123789999999999999873    44 5679999999863221111     1   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCC--c-ccc-ccccc---c--C
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISN--P-YLK-GAAEM---Y--E  234 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~--~-~~~-~~~~~---~--~  234 (294)
                                     ..|+.+|.+.+.+.+.++.+.   +++++++|||.++++......  . ... .....   +  .
T Consensus       144 ---------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (250)
T 2fwm_X          144 ---------------SAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLG  208 (250)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------------------------
T ss_pred             ---------------chHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhccccc
Confidence                           679999999999999988764   899999999999988632110  0 000 00000   0  0


Q ss_pred             CCccccccHHHHHHHHHhhhcCc--CCCCeEEe
Q 043792          235 DGVMASVDLRFYVDAHICVFEDV--SSYGRYLC  265 (294)
Q Consensus       235 ~~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~  265 (294)
                      .....+.+++|+|++++.++..+  ...|+.+.
T Consensus       209 ~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~  241 (250)
T 2fwm_X          209 IPLGKIARPQEIANTILFLASDLASHITLQDIV  241 (250)
T ss_dssp             -------CHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             CCCCCCcCHHHHHHHHHHHhCccccCCCCCEEE
Confidence            11123789999999999998764  23566443

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.93  E-value=2.7e-25  Score=187.01  Aligned_cols=221  Identities=14%  Similarity=0.058  Sum_probs=156.9

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++++||||||+|+||+++++.|+++|++|++++|+.+..+.+.+++  .....++.++.+|++|++++.++++     
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l--~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   96 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKEL--REAGVEADGRTCDVRSVPEIEALVAAVVER   96 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--HHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            345689999999999999999999999999999999876555444422  1224578899999999998888776     


Q ss_pred             --cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc-----CCCcEEEEecCcceeeeCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT-----NTVDKVVFTSSLTAVVWNNHRDNPTSH  164 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~-----~~~~~~v~~Ss~~~~~~~~~~~~~~~~  164 (294)
                        ++|+|||||+.......      ..+..+++|+.++.++++++.+.     .+.++||++||..+.. +...    . 
T Consensus        97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~-~~~~----~-  170 (277)
T 2rhc_B           97 YGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQ-GVVH----A-  170 (277)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTS-CCTT----C-
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECcccccc-CCCC----C-
Confidence              58999999987543211      11378999999999999986543     1457999999986322 1111    1 


Q ss_pred             CCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc-ccc------ccc-ccc
Q 043792          165 DFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP-YLK------GAA-EMY  233 (294)
Q Consensus       165 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~-~~~------~~~-~~~  233 (294)
                                       ..|+.+|.+.+.+.+.++.+.   ++++++++||.++++....... ...      +.. ..+
T Consensus       171 -----------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  233 (277)
T 2rhc_B          171 -----------------APYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRI  233 (277)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred             -----------------ccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHH
Confidence                             679999999999999988764   7999999999998764210000 000      000 000


Q ss_pred             --CCCccccccHHHHHHHHHhhhcCcC--CCCe-EEeecc
Q 043792          234 --EDGVMASVDLRFYVDAHICVFEDVS--SYGR-YLCFNH  268 (294)
Q Consensus       234 --~~~~~~~v~v~D~a~~i~~~~~~~~--~~~~-~~~~~~  268 (294)
                        ......+++++|+|++++.++..+.  ..|+ +.+.++
T Consensus       234 ~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG  273 (277)
T 2rhc_B          234 TARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG  273 (277)
T ss_dssp             HHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCC
Confidence              0111238899999999999987543  3565 445443

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.93  E-value=9.7e-25  Score=183.24  Aligned_cols=218  Identities=14%  Similarity=0.025  Sum_probs=152.3

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHh------
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNAL------   96 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~------   96 (294)
                      ..++++++||||+|+||+++++.|+++|++|++++|+.+..+.+.+++  .....++.++.+|++|++++.+++      
T Consensus        18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   95 (273)
T 1ae1_A           18 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIW--REKGLNVEGSVCDLLSRTERDKLMQTVAHV   95 (273)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--HHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999876555444322  122457899999999999888776      


Q ss_pred             --ccCCEEEecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCCCC
Q 043792           97 --KGCSGLFYSFEPPSDHS----T--YDELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPTSH  164 (294)
Q Consensus        97 --~~~d~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  164 (294)
                        .++|++||||+......    .  ..+..+++|+.++.++++++.    +. +.+++|++||..++.....     . 
T Consensus        96 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~~~~~-----~-  168 (273)
T 1ae1_A           96 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS-QNGNVIFLSSIAGFSALPS-----V-  168 (273)
T ss_dssp             TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TSEEEEEECCGGGTSCCTT-----C-
T ss_pred             cCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcCHhhcCCCCC-----c-
Confidence              36899999998754321    1  123788899999999999874    33 5579999999863221111     1 


Q ss_pred             CCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccc--ccc-c-ccc-CCC
Q 043792          165 DFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYL--KGA-A-EMY-EDG  236 (294)
Q Consensus       165 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~--~~~-~-~~~-~~~  236 (294)
                                       ..|+.+|.+.+.+.+.++.+.   |+++++++||.++++.........  ... . ... ...
T Consensus       169 -----------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p  231 (273)
T 1ae1_A          169 -----------------SLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTP  231 (273)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHST
T ss_pred             -----------------chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCC
Confidence                             689999999999999988764   899999999999988632110000  000 0 000 001


Q ss_pred             ccccccHHHHHHHHHhhhcCcC--CCCeEEee
Q 043792          237 VMASVDLRFYVDAHICVFEDVS--SYGRYLCF  266 (294)
Q Consensus       237 ~~~~v~v~D~a~~i~~~~~~~~--~~~~~~~~  266 (294)
                      ...+.+++|+|++++.++....  ..|+.+..
T Consensus       232 ~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~v  263 (273)
T 1ae1_A          232 MGRAGKPQEVSALIAFLCFPAASYITGQIIWA  263 (273)
T ss_dssp             TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             CCCCcCHHHHHHHHHHHhCccccCcCCCEEEE
Confidence            1127899999999999886532  35664433

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.93  E-value=6.2e-25  Score=184.95  Aligned_cols=224  Identities=15%  Similarity=0.004  Sum_probs=157.1

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC------------ChhhHHHHHhhccCCCCeEEEECCCCChh
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG------------KLQCIEEELINYNEEKKLKVFQADPFDYH   90 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~------------~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~   90 (294)
                      ...+++||||||+|+||+++++.|+++|++|++++|+..            ..+.+..+  ......++.++.+|++|++
T Consensus        10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~   87 (278)
T 3sx2_A           10 PLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKL--VEDIGSRIVARQADVRDRE   87 (278)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHH--HHHHTCCEEEEECCTTCHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHH--HHhcCCeEEEEeCCCCCHH
Confidence            456789999999999999999999999999999998732            11222221  1223467999999999999


Q ss_pred             HHHHHhc-------cCCEEEecCCCCCCCCcc--hhhhHhHhhHHHHHHHHHHHhc----CCCcEEEEecCcceeeeCCC
Q 043792           91 SLVNALK-------GCSGLFYSFEPPSDHSTY--DELTAEVETMAAHNVLEACAQT----NTVDKVVFTSSLTAVVWNNH  157 (294)
Q Consensus        91 ~~~~~~~-------~~d~Vih~a~~~~~~~~~--~~~~~~~n~~~~~~ll~~~~~~----~~~~~~v~~Ss~~~~~~~~~  157 (294)
                      ++.++++       ++|++||||+........  .++.+++|+.++.++++++...    +...++|++||..++. +..
T Consensus        88 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~-~~~  166 (278)
T 3sx2_A           88 SLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLA-GVG  166 (278)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS-CCC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcC-CCc
Confidence            9988876       689999999976544322  2388999999999999987543    2246899999986322 110


Q ss_pred             CCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc--ccc-----
Q 043792          158 RDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP--YLK-----  227 (294)
Q Consensus       158 ~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~--~~~-----  227 (294)
                      .            +....      ..|+.+|.+.+.+.+.++.+.   ++++++++||.|.++.......  ...     
T Consensus       167 ~------------~~~~~------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~  228 (278)
T 3sx2_A          167 S------------ADPGS------VGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAA  228 (278)
T ss_dssp             C------------SSHHH------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHH
T ss_pred             c------------CCCCc------hHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccch
Confidence            0            00111      679999999999999988764   6999999999999887432110  000     


Q ss_pred             cc-ccccCCC-ccccccHHHHHHHHHhhhcCcC--CCCeEEeec
Q 043792          228 GA-AEMYEDG-VMASVDLRFYVDAHICVFEDVS--SYGRYLCFN  267 (294)
Q Consensus       228 ~~-~~~~~~~-~~~~v~v~D~a~~i~~~~~~~~--~~~~~~~~~  267 (294)
                      .. ...+.+. ...+++++|+|++++.++....  .+|+.+..+
T Consensus       229 ~~~~~~~~~~~p~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vd  272 (278)
T 3sx2_A          229 TDTPGAMGNAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVD  272 (278)
T ss_dssp             CC--CTTSCSSSCSSBCHHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred             hhhhhhhhhhcCcCcCCHHHHHHHHHHHhCcccccccCCEEeEC
Confidence            00 0011111 1238899999999999986543  456644433

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.93  E-value=5.4e-25  Score=184.05  Aligned_cols=218  Identities=14%  Similarity=0.076  Sum_probs=152.9

Q ss_pred             CCCCeEEEeCCC--chHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           24 NATKTVCVMDAS--GHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        24 ~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      .++++||||||+  |+||+++++.|+++|++|++++|+....+.+.+   .........++.+|++|++++.++++    
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~---l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEE---FAAQLGSDIVLQCDVAEDASIDTMFAELGK   83 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHH---HHHHTTCCCEEECCTTCHHHHHHHHHHHHT
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHH---HHHhcCCcEEEEccCCCHHHHHHHHHHHHH
Confidence            456899999999  999999999999999999999998732222222   11111234788999999999888876    


Q ss_pred             ---cCCEEEecCCCCCC-----------CCcchhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSD-----------HSTYDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPT  162 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~-----------~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~  162 (294)
                         ++|+|||||+....           .....+..+++|+.++.++++++.+. ..-.+||++||..++......    
T Consensus        84 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~----  159 (265)
T 1qsg_A           84 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNY----  159 (265)
T ss_dssp             TCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTT----
T ss_pred             HcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCCCc----
Confidence               57999999997542           11122378999999999999999875 112589999997532211111    


Q ss_pred             CCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCcccccccccc--CCCc
Q 043792          163 SHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAAEMY--EDGV  237 (294)
Q Consensus       163 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~--~~~~  237 (294)
                                         ..|+.+|.+.+.+.+.++.+.   ++++++++||.++++....... .......+  ....
T Consensus       160 -------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~p~  219 (265)
T 1qsg_A          160 -------------------NVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKD-FRKMLAHCEAVTPI  219 (265)
T ss_dssp             -------------------THHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTT-HHHHHHHHHHHSTT
T ss_pred             -------------------hHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccc-cHHHHHHHHhcCCC
Confidence                               679999999999999988775   8999999999999886321100 00000000  0011


Q ss_pred             cccccHHHHHHHHHhhhcCcC--CCCe-EEeecc
Q 043792          238 MASVDLRFYVDAHICVFEDVS--SYGR-YLCFNH  268 (294)
Q Consensus       238 ~~~v~v~D~a~~i~~~~~~~~--~~~~-~~~~~~  268 (294)
                      ..+.+++|+|++++.++....  ..|+ +.+.++
T Consensus       220 ~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG  253 (265)
T 1qsg_A          220 RRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGG  253 (265)
T ss_dssp             SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CCCCCHHHHHHHHHHHhCchhcCccCCEEEECCC
Confidence            127899999999999986533  2565 445443

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.93  E-value=9.7e-25  Score=181.38  Aligned_cols=216  Identities=17%  Similarity=0.096  Sum_probs=158.0

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++|++|||||+|+||+++++.|+++|++|++++|+.+..+.+.+++     ..++.++.+|++|.+++.++++     
T Consensus         5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (255)
T 4eso_A            5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRVHALRSDIADLNEIAVLGAAAGQT   79 (255)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999876666555532     2478999999999998887764     


Q ss_pred             --cCCEEEecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS----T--YDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                        ++|++||||+......    .  ..++.+++|+.++.++++++... ....++|++||..+.......          
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  149 (255)
T 4eso_A           80 LGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGM----------  149 (255)
T ss_dssp             HSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTTB----------
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCc----------
Confidence              5799999999765332    1  12378999999999999998765 122589999998643211111          


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccc----ccc--CCCccc
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAA----EMY--EDGVMA  239 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~----~~~--~~~~~~  239 (294)
                                   ..|+.+|.+.+.+.+.++.+.   |+++++++||.+.++...... ......    ...  ......
T Consensus       150 -------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~~~~~p~~r  215 (255)
T 4eso_A          150 -------------SVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAG-ITEAERAEFKTLGDNITPMKR  215 (255)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTT-SCHHHHHHHHHHHHHHSTTSS
T ss_pred             -------------hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCccccccc-CChhhHHHHHHHHhccCCCCC
Confidence                         789999999999999988774   899999999999887632211 000000    000  011122


Q ss_pred             cccHHHHHHHHHhhhcC-cCCCCeE-Eeec
Q 043792          240 SVDLRFYVDAHICVFED-VSSYGRY-LCFN  267 (294)
Q Consensus       240 ~v~v~D~a~~i~~~~~~-~~~~~~~-~~~~  267 (294)
                      +.+++|+|++++.++.. ...+|+. .+.+
T Consensus       216 ~~~pedvA~~v~~L~s~~~~itG~~i~vdG  245 (255)
T 4eso_A          216 NGTADEVARAVLFLAFEATFTTGAKLAVDG  245 (255)
T ss_dssp             CBCHHHHHHHHHHHHHTCTTCCSCEEEEST
T ss_pred             CcCHHHHHHHHHHHcCcCcCccCCEEEECC
Confidence            77899999999998864 2335664 4444

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.93  E-value=1e-24  Score=180.91  Aligned_cols=209  Identities=14%  Similarity=0.049  Sum_probs=146.2

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      +.+++++|||||+|+||+++++.|+++|++|++++|+.++.+.+.+++  ...+.++.++.+|++|.+++.++++     
T Consensus         4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (252)
T 3h7a_A            4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEI--EAAGGRIVARSLDARNEDEVTAFLNAADAH   81 (252)
T ss_dssp             -CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHH--HHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCeEEEEECcCCCHHHHHHHHHHHHhh
Confidence            346789999999999999999999999999999999988777666543  2234578999999999999988886     


Q ss_pred             -cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                       ++|++|||||.......      ..+..+++|+.++.++++++...   .+..++|++||..+.......         
T Consensus        82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  152 (252)
T 3h7a_A           82 APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGF---------  152 (252)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTC---------
T ss_pred             CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCC---------
Confidence             57999999997553221      11378999999999998887432   145799999998643211111         


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeE-EEEecCceeCCCCCCCCccccccccccC-CCcccccc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISM-VSINGGLVMGPDVTISNPYLKGAAEMYE-DGVMASVD  242 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~-~ilrp~~i~G~~~~~~~~~~~~~~~~~~-~~~~~~v~  242 (294)
                                    ..|+.+|.+.+.+.+.++.+.   |+++ .+++||.+..+......   ........ .....+.+
T Consensus       153 --------------~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~---~~~~~~~~~~~~~~~~~  215 (252)
T 3h7a_A          153 --------------AAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERR---EQMFGKDALANPDLLMP  215 (252)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------------------------------CC
T ss_pred             --------------ccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccc---hhhhhhhhhcCCccCCC
Confidence                          789999999999999988774   7999 89999999776532111   11100010 11112889


Q ss_pred             HHHHHHHHHhhhcCcCC
Q 043792          243 LRFYVDAHICVFEDVSS  259 (294)
Q Consensus       243 v~D~a~~i~~~~~~~~~  259 (294)
                      ++|+|++++.++..+..
T Consensus       216 pedvA~~~~~l~s~~~~  232 (252)
T 3h7a_A          216 PAAVAGAYWQLYQQPKS  232 (252)
T ss_dssp             HHHHHHHHHHHHHCCGG
T ss_pred             HHHHHHHHHHHHhCchh
Confidence            99999999999986543

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.93  E-value=1.5e-24  Score=181.98  Aligned_cols=218  Identities=16%  Similarity=0.074  Sum_probs=155.1

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC-hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK-LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      ..++++||||||+|+||+++++.|+++|++|++++|+... .+.+.++  ......++.++.+|++|.+++.++++    
T Consensus        26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~  103 (271)
T 4iin_A           26 QFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNE--LEEKGYKAAVIKFDAASESDFIEAIQTIVQ  103 (271)
T ss_dssp             CCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH--HHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH--HHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999996433 3333332  22234578999999999998888775    


Q ss_pred             ---cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                         ++|+|||||+.......      ..++.+++|+.++.++++++.+.   .+..++|++||..+.......       
T Consensus       104 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  176 (271)
T 4iin_A          104 SDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQ-------  176 (271)
T ss_dssp             HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC-------
T ss_pred             hcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCc-------
Confidence               68999999997654321      12378999999999988876543   155799999998643221111       


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-cccccccccCCCccccc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YLKGAAEMYEDGVMASV  241 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~v  241 (294)
                                      ..|+.+|.+.+.+.+.++.+   .++++++++||.+.++....... .........  ....+.
T Consensus       177 ----------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~--~~~~~~  238 (271)
T 4iin_A          177 ----------------TNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKADYVKNI--PLNRLG  238 (271)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC------------CGGGC--TTCSCB
T ss_pred             ----------------hHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHHHHHHHHhcC--CcCCCc
Confidence                            78999999999999998877   58999999999998775322110 100000111  112388


Q ss_pred             cHHHHHHHHHhhhcCcC--CCCeEEeec
Q 043792          242 DLRFYVDAHICVFEDVS--SYGRYLCFN  267 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~~--~~~~~~~~~  267 (294)
                      +++|+|++++.++..+.  ..|+.+..+
T Consensus       239 ~p~dvA~~i~~l~s~~~~~itG~~i~vd  266 (271)
T 4iin_A          239 SAKEVAEAVAFLLSDHSSYITGETLKVN  266 (271)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             CHHHHHHHHHHHhCCCcCCCcCCEEEeC
Confidence            99999999999987543  456654433

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.93  E-value=1.1e-24  Score=183.68  Aligned_cols=220  Identities=12%  Similarity=0.063  Sum_probs=156.0

Q ss_pred             CCCCCCCeEEEeCCCch--HHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-
Q 043792           21 DSSNATKTVCVMDASGH--FASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-   97 (294)
Q Consensus        21 ~~~~~~~~vlItGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-   97 (294)
                      |...++++||||||+|+  ||+++++.|+++|++|++++|+. ..+.+.+   +.....++.++.+|++|.+++.++++ 
T Consensus        21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~---l~~~~~~~~~~~~Dl~~~~~v~~~~~~   96 (280)
T 3nrc_A           21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ-FKDRVEK---LCAEFNPAAVLPCDVISDQEIKDLFVE   96 (280)
T ss_dssp             -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT-CHHHHHH---HHGGGCCSEEEECCTTCHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch-HHHHHHH---HHHhcCCceEEEeecCCHHHHHHHHHH
Confidence            44566799999999977  99999999999999999999987 3333333   22233468999999999998888875 


Q ss_pred             ------cCCEEEecCCCCCC-----------CCcchhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCC
Q 043792           98 ------GCSGLFYSFEPPSD-----------HSTYDELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHR  158 (294)
Q Consensus        98 ------~~d~Vih~a~~~~~-----------~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~  158 (294)
                            ++|+|||||+....           ........+++|+.++.++++++...  .+..++|++||..+.......
T Consensus        97 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  176 (280)
T 3nrc_A           97 LGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSY  176 (280)
T ss_dssp             HHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCTTT
T ss_pred             HHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCCCc
Confidence                  46999999997643           11112378999999999999988754  234699999998643211111


Q ss_pred             CCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCcccccccccc--
Q 043792          159 DNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMY--  233 (294)
Q Consensus       159 ~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~--  233 (294)
                                             ..|+.+|.+.+.+.+.++.+   .++++.+++||.|.++........ ......+  
T Consensus       177 -----------------------~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~  232 (280)
T 3nrc_A          177 -----------------------NTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNF-KKMLDYNAM  232 (280)
T ss_dssp             -----------------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTH-HHHHHHHHH
T ss_pred             -----------------------hhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcch-HHHHHHHHh
Confidence                                   68999999999999988876   589999999999987652211100 0000000  


Q ss_pred             CCCccccccHHHHHHHHHhhhcCcC--CCCeE-Eeecc
Q 043792          234 EDGVMASVDLRFYVDAHICVFEDVS--SYGRY-LCFNH  268 (294)
Q Consensus       234 ~~~~~~~v~v~D~a~~i~~~~~~~~--~~~~~-~~~~~  268 (294)
                      ......+.+++|+|++++.++....  .+|+. .+.++
T Consensus       233 ~~p~~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG  270 (280)
T 3nrc_A          233 VSPLKKNVDIMEVGNTVAFLCSDMATGITGEVVHVDAG  270 (280)
T ss_dssp             HSTTCSCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTT
T ss_pred             cCCCCCCCCHHHHHHHHHHHhCcccCCcCCcEEEECCC
Confidence            0111227889999999999987543  46664 44443

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.93  E-value=5.4e-25  Score=186.90  Aligned_cols=220  Identities=12%  Similarity=0.054  Sum_probs=156.6

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCC---CeEEEECCCCChhHHHHHhc--
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEK---KLKVFQADPFDYHSLVNALK--   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~---~v~~~~~Dl~~~~~~~~~~~--   97 (294)
                      ..++|+||||||+|+||+++++.|+++|++|++++|+.++.+.+..++  .....   ++.++.+|++|++++.++++  
T Consensus        23 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l--~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  100 (297)
T 1xhl_A           23 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQI--LKAGVPAEKINAVVADVTEASGQDDIINTT  100 (297)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--HHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCCCceEEEEecCCCCHHHHHHHHHHH
Confidence            356789999999999999999999999999999999876655544432  11223   68999999999998888775  


Q ss_pred             -----cCCEEEecCCCCCCCC------c--chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCC
Q 043792           98 -----GCSGLFYSFEPPSDHS------T--YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNP  161 (294)
Q Consensus        98 -----~~d~Vih~a~~~~~~~------~--~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~  161 (294)
                           ++|+||||||......      .  ..+..+++|+.++.++++++.+.   .+ ++||++||..+.......   
T Consensus       101 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~~~---  176 (297)
T 1xhl_A          101 LAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSG---  176 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTT---
T ss_pred             HHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCCCC---
Confidence                 6899999998754322      1  12378999999999999887654   24 799999997532211000   


Q ss_pred             CCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCcccc------ccc--
Q 043792          162 TSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLK------GAA--  230 (294)
Q Consensus       162 ~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~------~~~--  230 (294)
                       .                  ..|+.+|.+.+.+.+.++.+   +|+++++++||.+.++...... ...      ...  
T Consensus       177 -~------------------~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~~  236 (297)
T 1xhl_A          177 -Y------------------PYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMG-LPETASDKLYSFIG  236 (297)
T ss_dssp             -S------------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTT-CCHHHHHHHHHHHH
T ss_pred             -c------------------chHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccc-cccccccchHHHHH
Confidence             1                  67999999999999988865   5899999999999887521110 000      000  


Q ss_pred             cccC-CCccccccHHHHHHHHHhhhcCc---CCCCeE-Eeecc
Q 043792          231 EMYE-DGVMASVDLRFYVDAHICVFEDV---SSYGRY-LCFNH  268 (294)
Q Consensus       231 ~~~~-~~~~~~v~v~D~a~~i~~~~~~~---~~~~~~-~~~~~  268 (294)
                      .... .....+.+++|+|++++.++..+   ...|+. .+.++
T Consensus       237 ~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG  279 (297)
T 1xhl_A          237 SRKECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGG  279 (297)
T ss_dssp             HCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCC
Confidence            0000 01123889999999999998754   345664 44443

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.93  E-value=8.5e-25  Score=181.62  Aligned_cols=218  Identities=14%  Similarity=0.010  Sum_probs=153.9

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCe-EEEECCCCChhHHHHHhc----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKL-KVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v-~~~~~Dl~~~~~~~~~~~----   97 (294)
                      ..++++|+||||+|+||+++++.|+++|++|++++|+.++.+.+.+++     ..++ .++.+|++|.+++.++++    
T Consensus         8 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (254)
T 2wsb_A            8 RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL-----GAAVAARIVADVTDAEAMTAAAAEAEA   82 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cccceeEEEEecCCHHHHHHHHHHHHh
Confidence            345689999999999999999999999999999999876555444422     2356 889999999998887764    


Q ss_pred             --cCCEEEecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS----T--YDELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                        ++|+|||||+......    .  ..+..+++|+.++.++++++.    +. +.++||++||..++. +...       
T Consensus        83 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~-~~~~-------  153 (254)
T 2wsb_A           83 VAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVAR-GAGAIVNLGSMSGTI-VNRP-------  153 (254)
T ss_dssp             HSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTS-CCSS-------
T ss_pred             hCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEecchhcc-CCCC-------
Confidence              6899999998754321    1  113788999999887777654    44 568999999975322 1100       


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccc-ccc-CCCcccc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAA-EMY-EDGVMAS  240 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~-~~~-~~~~~~~  240 (294)
                             .+.      ..|+.+|.+.+.+++.++.+.   +++++++|||.++++...... ...... ... ......+
T Consensus       154 -------~~~------~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~  219 (254)
T 2wsb_A          154 -------QFA------SSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMR-ERPELFETWLDMTPMGRC  219 (254)
T ss_dssp             -------SCB------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHH-TCHHHHHHHHHTSTTSSC
T ss_pred             -------Ccc------hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccc-cChHHHHHHHhcCCCCCC
Confidence                   111      679999999999999988775   899999999999987521100 000000 000 0111238


Q ss_pred             ccHHHHHHHHHhhhcCc--CCCCeE-Eeecc
Q 043792          241 VDLRFYVDAHICVFEDV--SSYGRY-LCFNH  268 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~--~~~~~~-~~~~~  268 (294)
                      ++++|+|++++.++...  ...|+. .+.++
T Consensus       220 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  250 (254)
T 2wsb_A          220 GEPSEIAAAALFLASPAASYVTGAILAVDGG  250 (254)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCHHHHHHHHHHHhCcccccccCCEEEECCC
Confidence            89999999999998653  235664 44444

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.93  E-value=2.7e-24  Score=183.27  Aligned_cols=220  Identities=12%  Similarity=0.055  Sum_probs=156.7

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhc---cCCCCeEEEECCCCChhHHHHHhc--
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINY---NEEKKLKVFQADPFDYHSLVNALK--   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~---~~~~~v~~~~~Dl~~~~~~~~~~~--   97 (294)
                      ..++++|+||||+|+||+++++.|+++|++|++++|+.+..+.+.+++...   ....++.++.+|++|.+++.++++  
T Consensus        15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   94 (303)
T 1yxm_A           15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   94 (303)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHH
Confidence            345689999999999999999999999999999999876555544432110   124578999999999999888876  


Q ss_pred             -----cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCC
Q 043792           98 -----GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTS  163 (294)
Q Consensus        98 -----~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~  163 (294)
                           ++|+|||||+.......      ..+..+++|+.++.++++++...   .+.+++|++||.+  ..+...    .
T Consensus        95 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~--~~~~~~----~  168 (303)
T 1yxm_A           95 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT--KAGFPL----A  168 (303)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC--TTCCTT----C
T ss_pred             HHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec--ccCCCc----c
Confidence                 48999999996432211      12377999999999999997652   1346899999974  211111    1


Q ss_pred             CCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCC--CCCC---ccccccccccCC
Q 043792          164 HDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDV--TISN---PYLKGAAEMYED  235 (294)
Q Consensus       164 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~--~~~~---~~~~~~~~~~~~  235 (294)
                                        ..|+.+|.+.+.+.+.++.+.   |++++++|||.++|+..  ....   ..........+ 
T Consensus       169 ------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p-  229 (303)
T 1yxm_A          169 ------------------VHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIP-  229 (303)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGST-
T ss_pred             ------------------hhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCc-
Confidence                              679999999999999888774   89999999999999841  1110   01111000111 


Q ss_pred             CccccccHHHHHHHHHhhhcCcC--CCCe-EEeecc
Q 043792          236 GVMASVDLRFYVDAHICVFEDVS--SYGR-YLCFNH  268 (294)
Q Consensus       236 ~~~~~v~v~D~a~~i~~~~~~~~--~~~~-~~~~~~  268 (294)
                       ...+.+++|+|++++.++....  .+|+ +.+.++
T Consensus       230 -~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG  264 (303)
T 1yxm_A          230 -AKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGG  264 (303)
T ss_dssp             -TSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -ccCCCCHHHHHHHHHHHhCcccccCCCcEEEECCC
Confidence             1228899999999999986543  3566 445443

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.93  E-value=8.3e-25  Score=184.25  Aligned_cols=218  Identities=13%  Similarity=0.041  Sum_probs=154.0

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc-----
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG-----   98 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-----   98 (294)
                      .++++||||||+|+||+++++.|+++|++|++++|+.+..+.+.+.+  .....++.++.+|++|.+++.+++++     
T Consensus        32 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  109 (279)
T 3ctm_A           32 LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQ--KTYGVHSKAYKCNISDPKSVEETISQQEKDF  109 (279)
T ss_dssp             CTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHH--HHHCSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999999887766554422  11235789999999999998888764     


Q ss_pred             --CCEEEecCCCCCC-C----Ccc---hhhhHhHhhHHH----HHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCC
Q 043792           99 --CSGLFYSFEPPSD-H----STY---DELTAEVETMAA----HNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSH  164 (294)
Q Consensus        99 --~d~Vih~a~~~~~-~----~~~---~~~~~~~n~~~~----~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  164 (294)
                        +|+|||+|+.... .    ...   .+..+++|+.++    +++++.+++. +.++||++||..+....         
T Consensus       110 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~---------  179 (279)
T 3ctm_A          110 GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKN-GKGSLIITSSISGKIVN---------  179 (279)
T ss_dssp             SCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCCTTSCC----------
T ss_pred             CCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCeEEEECchHhccCC---------
Confidence              8999999986543 1    111   127889999994    5666666666 67899999997532110         


Q ss_pred             CCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc-cccccccccCCCcccc
Q 043792          165 DFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP-YLKGAAEMYEDGVMAS  240 (294)
Q Consensus       165 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~  240 (294)
                            +..+.      ..|+.+|.+.|.+++.++.+.   + ++++++||.+.++....... .........+  ...+
T Consensus       180 ------~~~~~------~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p--~~~~  244 (279)
T 3ctm_A          180 ------IPQLQ------APYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDMKAKWWQLTP--LGRE  244 (279)
T ss_dssp             --------CCH------HHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCHHHHHHHHHHST--TCSC
T ss_pred             ------CCCCc------ccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccChHHHHHHHHhCC--ccCC
Confidence                  00011      679999999999999998774   6 99999999998776321100 0000000011  1238


Q ss_pred             ccHHHHHHHHHhhhcCcC--CCCeE-Eeecc
Q 043792          241 VDLRFYVDAHICVFEDVS--SYGRY-LCFNH  268 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~~--~~~~~-~~~~~  268 (294)
                      ++++|+|++++.++..+.  ..|+. .+.++
T Consensus       245 ~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG  275 (279)
T 3ctm_A          245 GLTQELVGGYLYLASNASTFTTGSDVVIDGG  275 (279)
T ss_dssp             BCGGGTHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence            899999999999987542  35664 44443

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.93  E-value=5.2e-25  Score=182.89  Aligned_cols=213  Identities=14%  Similarity=0.011  Sum_probs=152.6

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++     ..++.++.+|++|++++.++++      
T Consensus         4 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (253)
T 1hxh_A            4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHDVSSEADWTLVMAAVQRRL   78 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45689999999999999999999999999999999876555544421     3478999999999998887775      


Q ss_pred             -cCCEEEecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS----T--YDELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                       ++|+|||||+......    .  ..+..+++|+.++.++.+++.    +. + +++|++||..++.... .    .   
T Consensus        79 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~-g~iv~isS~~~~~~~~-~----~---  148 (253)
T 1hxh_A           79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET-G-GSIINMASVSSWLPIE-Q----Y---  148 (253)
T ss_dssp             CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-C-EEEEEECCGGGTSCCT-T----B---
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHc-C-CEEEEEcchhhcCCCC-C----C---
Confidence             3699999998754321    1  123789999998887776554    34 5 8999999986322111 1    1   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---c--CCeEEEEecCceeCCCCCC--CCccccc-ccc---ccCC
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---R--GISMVSINGGLVMGPDVTI--SNPYLKG-AAE---MYED  235 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~--~~~~~ilrp~~i~G~~~~~--~~~~~~~-~~~---~~~~  235 (294)
                                     ..|+.+|.+.+.+.+.++.+   .  +++++++|||.++++....  ....... ...   ..+ 
T Consensus       149 ---------------~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p-  212 (253)
T 1hxh_A          149 ---------------AGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNR-  212 (253)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBT-
T ss_pred             ---------------ccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHHHhhhhccCc-
Confidence                           67999999999999988866   3  8999999999999875211  0001000 000   111 


Q ss_pred             CccccccHHHHHHHHHhhhcCcC--CCCeEE-eecc
Q 043792          236 GVMASVDLRFYVDAHICVFEDVS--SYGRYL-CFNH  268 (294)
Q Consensus       236 ~~~~~v~v~D~a~~i~~~~~~~~--~~~~~~-~~~~  268 (294)
                       ...+.+++|+|++++.++..+.  ..|+++ +.++
T Consensus       213 -~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  247 (253)
T 1hxh_A          213 -AGRAYMPERIAQLVLFLASDESSVMSGSELHADNS  247 (253)
T ss_dssp             -TCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             -cCCCCCHHHHHHHHHHHcCccccCCCCcEEEECCC
Confidence             1237899999999999987643  356644 4443

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.93  E-value=1.1e-24  Score=183.30  Aligned_cols=219  Identities=11%  Similarity=0.042  Sum_probs=157.5

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..+++++|||||+|+||+++++.|+++|++|++++|+.++.+....++. .....++.++.+|++|.+++.++++     
T Consensus        24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  102 (277)
T 4fc7_A           24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLA-GATGRRCLPLSMDVRAPPAVMAAVDQALKE  102 (277)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHH-HHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH-HhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999998766554443221 1124578999999999998887775     


Q ss_pred             --cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                        ++|++||||+.......      ..++.+++|+.++.++++++...   .+..++|++||..+.......        
T Consensus       103 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  174 (277)
T 4fc7_A          103 FGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQ--------  174 (277)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTC--------
T ss_pred             cCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCc--------
Confidence              68999999996543221      12378999999999999987532   134699999998643221111        


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccc----ccc-CCCcc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAA----EMY-EDGVM  238 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~----~~~-~~~~~  238 (294)
                                     ..|+.+|.+.+.+.+.++.+.   |+++.+++||.|.++....   ...+..    ... .....
T Consensus       175 ---------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~---~~~~~~~~~~~~~~~~p~~  236 (277)
T 4fc7_A          175 ---------------VHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLR---RLGGPQASLSTKVTASPLQ  236 (277)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHH---HHSCCHHHHHHHHHTSTTS
T ss_pred             ---------------HHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhh---hccCCHHHHHHHhccCCCC
Confidence                           689999999999999988774   8999999999998764110   000000    000 11112


Q ss_pred             ccccHHHHHHHHHhhhcCcC--CCCeEE-eecc
Q 043792          239 ASVDLRFYVDAHICVFEDVS--SYGRYL-CFNH  268 (294)
Q Consensus       239 ~~v~v~D~a~~i~~~~~~~~--~~~~~~-~~~~  268 (294)
                      .+.+++|+|++++.++....  .+|+.+ +.++
T Consensus       237 r~~~p~dvA~~v~fL~s~~~~~itG~~i~vdGG  269 (277)
T 4fc7_A          237 RLGNKTEIAHSVLYLASPLASYVTGAVLVADGG  269 (277)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHcCCccCCcCCCEEEECCC
Confidence            27889999999999997533  467644 4443

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.93  E-value=4e-25  Score=184.71  Aligned_cols=225  Identities=17%  Similarity=0.147  Sum_probs=156.6

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc-----
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG-----   98 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-----   98 (294)
                      .++|+||||||+|+||++++++|+++|++|++++|+..+.....+++. .....++.++.+|++|.+++.+++++     
T Consensus        12 ~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   90 (265)
T 1h5q_A           12 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVG-KEFGVKTKAYQCDVSNTDIVTKTIQQIDADL   90 (265)
T ss_dssp             CTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHH-HHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHH-HhcCCeeEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            456899999999999999999999999999999997666543333211 11235789999999999988887753     


Q ss_pred             --CCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc----CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           99 --CSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT----NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        99 --~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                        +|+|||||+.......      ..+..+++|+.++.++++++.+.    +..++||++||..+.. +...        
T Consensus        91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-~~~~--------  161 (265)
T 1h5q_A           91 GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQI-INQS--------  161 (265)
T ss_dssp             CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS-CCEE--------
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhc-cccc--------
Confidence              7999999997543221      12377899999999999987643    2247999999975322 1100        


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCcccccccccc--CCCccccc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAAEMY--EDGVMASV  241 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~--~~~~~~~v  241 (294)
                       +..+..+      ...|+.+|.+.+.+++.++.+.   +++++++|||.++++......   ......+  ......++
T Consensus       162 -~~~~~~~------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~  231 (265)
T 1h5q_A          162 -SLNGSLT------QVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMD---KKIRDHQASNIPLNRFA  231 (265)
T ss_dssp             -ETTEECS------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC---HHHHHHHHHTCTTSSCB
T ss_pred             -ccccccc------ccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccc---hhHHHHHHhcCcccCCC
Confidence             0001111      1679999999999999988763   899999999999887632110   0000000  01112388


Q ss_pred             cHHHHHHHHHhhhcCcC--CCCe-EEeecc
Q 043792          242 DLRFYVDAHICVFEDVS--SYGR-YLCFNH  268 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~~--~~~~-~~~~~~  268 (294)
                      +++|+|++++.++..+.  ..|+ +.+.++
T Consensus       232 ~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  261 (265)
T 1h5q_A          232 QPEEMTGQAILLLSDHATYMTGGEYFIDGG  261 (265)
T ss_dssp             CGGGGHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred             CHHHHHHHHHhhccCchhcCcCcEEEecCC
Confidence            99999999999987543  3565 555554

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.93  E-value=3.1e-25  Score=186.88  Aligned_cols=211  Identities=14%  Similarity=0.109  Sum_probs=148.8

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++++||||||+|+||+++++.|+++|++|++++|+.++.+.+..++.......++.++.+|++|++++.++++     
T Consensus        29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  108 (279)
T 1xg5_A           29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ  108 (279)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            346789999999999999999999999999999999876655554432221222468899999999999888776     


Q ss_pred             --cCCEEEecCCCCCCCC------cchhhhHhHhhHH----HHHHHHHHHhcCCC--cEEEEecCcceeeeCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS------TYDELTAEVETMA----AHNVLEACAQTNTV--DKVVFTSSLTAVVWNNHRDNPTS  163 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~----~~~ll~~~~~~~~~--~~~v~~Ss~~~~~~~~~~~~~~~  163 (294)
                        ++|+|||||+......      ...+..+++|+.+    +..+++.+++. +.  ++||++||..+..  ...     
T Consensus       109 ~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~-~~~~g~iv~isS~~~~~--~~~-----  180 (279)
T 1xg5_A          109 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKER-NVDDGHIININSMSGHR--VLP-----  180 (279)
T ss_dssp             HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCCSCEEEEECCGGGTS--CCS-----
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCCceEEEEcChhhcc--cCC-----
Confidence              6899999998654321      1123789999999    56666666666 54  7999999985321  000     


Q ss_pred             CCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh-----cCCeEEEEecCceeCCCCCCCCccccccc-ccc-CCC
Q 043792          164 HDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD-----RGISMVSINGGLVMGPDVTISNPYLKGAA-EMY-EDG  236 (294)
Q Consensus       164 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~ilrp~~i~G~~~~~~~~~~~~~~-~~~-~~~  236 (294)
                              ..+.      ..|+.+|.+.+.+.+.++.+     .++++++++||.+.++..   ........ ... ...
T Consensus       181 --------~~~~------~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~---~~~~~~~~~~~~~~~~  243 (279)
T 1xg5_A          181 --------LSVT------HFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFA---FKLHDKDPEKAAATYE  243 (279)
T ss_dssp             --------CGGG------HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHH---HHHTTTCHHHHHHHHC
T ss_pred             --------CCCC------chhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhh---hhhcccChhHHhhhcc
Confidence                    0111      67999999999998887765     479999999999977641   10111111 000 001


Q ss_pred             ccccccHHHHHHHHHhhhcCcC
Q 043792          237 VMASVDLRFYVDAHICVFEDVS  258 (294)
Q Consensus       237 ~~~~v~v~D~a~~i~~~~~~~~  258 (294)
                      ...+++++|+|++++.++..+.
T Consensus       244 ~~~~~~~~dvA~~i~~l~~~~~  265 (279)
T 1xg5_A          244 QMKCLKPEDVAEAVIYVLSTPA  265 (279)
T ss_dssp             ---CBCHHHHHHHHHHHHHSCT
T ss_pred             cccCCCHHHHHHHHHHHhcCCc
Confidence            1237899999999999997654

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.93  E-value=2.4e-24  Score=180.25  Aligned_cols=218  Identities=14%  Similarity=0.048  Sum_probs=155.5

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++++||||||+|+||+++++.|+++|++|++++|+.+..+.+..++. .....++.++.+|++|++++.++++     
T Consensus        18 ~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (267)
T 1vl8_A           18 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLT-EKYGVETMAFRCDVSNYEEVKKLLEAVKEK   96 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH-HHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH-HhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999998765544433220 1123468899999999998888776     


Q ss_pred             --cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcc-eeeeCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLT-AVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~-~~~~~~~~~~~~~~~  165 (294)
                        ++|+|||||+.......      ..+..+++|+.++.++++++...   .+.+++|++||.. +.. +...    .  
T Consensus        97 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-~~~~----~--  169 (267)
T 1vl8_A           97 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV-TMPN----I--  169 (267)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC-CSSS----C--
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhcc-CCCC----C--
Confidence              68999999997543221      11378899999999998887432   2567999999975 211 1000    1  


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccc-cc--ccc-CCCcc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKG-AA--EMY-EDGVM  238 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~-~~--~~~-~~~~~  238 (294)
                                      ..|+.+|.+.+.+.+.++.+   +|+++++++||.+.++....   .... ..  ... .....
T Consensus       170 ----------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~---~~~~~~~~~~~~~~~p~~  230 (267)
T 1vl8_A          170 ----------------SAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEA---VFSDPEKLDYMLKRIPLG  230 (267)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHH---HHTCHHHHHHHHHTCTTS
T ss_pred             ----------------hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccc---cccChHHHHHHHhhCCCC
Confidence                            67999999999999998876   48999999999998775211   1100 00  000 01112


Q ss_pred             ccccHHHHHHHHHhhhcCc--CCCCeEEeec
Q 043792          239 ASVDLRFYVDAHICVFEDV--SSYGRYLCFN  267 (294)
Q Consensus       239 ~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~  267 (294)
                      .+++++|+|++++.++...  ...|+.+..+
T Consensus       231 ~~~~p~dvA~~v~~l~s~~~~~itG~~i~vd  261 (267)
T 1vl8_A          231 RTGVPEDLKGVAVFLASEEAKYVTGQIIFVD  261 (267)
T ss_dssp             SCBCGGGGHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             CCcCHHHHHHHHHHHcCccccCCcCCeEEEC
Confidence            3789999999999998654  3356654433

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.93  E-value=7.2e-25  Score=182.13  Aligned_cols=213  Identities=16%  Similarity=0.034  Sum_probs=151.8

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCe-EEEEecCCCC--hhhHHHHHhhccCCCCeEEEECCCCCh-hHHHHHhc--
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYT-VHAALHNHGK--LQCIEEELINYNEEKKLKVFQADPFDY-HSLVNALK--   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~--~~~l~~~~~~~~~~~~v~~~~~Dl~~~-~~~~~~~~--   97 (294)
                      .++|+|+||||+|+||+++++.|+++|++ |++++|+...  .+.+.+   . ....++.++.+|++|+ +++.++++  
T Consensus         3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~---~-~~~~~~~~~~~D~~~~~~~~~~~~~~~   78 (254)
T 1sby_A            3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKA---I-NPKVNITFHTYDVTVPVAESKKLLKKI   78 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHH---H-CTTSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHH---h-CCCceEEEEEEecCCChHHHHHHHHHH
Confidence            45689999999999999999999999997 9999998642  222222   1 1134688999999998 88877765  


Q ss_pred             -----cCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhc---CC---CcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 -----GCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQT---NT---VDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 -----~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~---~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                           ++|+|||||+...  ....+..+++|+.++.++++++.+.   .+   ..++|++||..++.....     .   
T Consensus        79 ~~~~g~id~lv~~Ag~~~--~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----~---  148 (254)
T 1sby_A           79 FDQLKTVDILINGAGILD--DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQ-----V---  148 (254)
T ss_dssp             HHHHSCCCEEEECCCCCC--TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT-----S---
T ss_pred             HHhcCCCCEEEECCccCC--HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCC-----c---
Confidence                 6899999999753  2334588999999999999988643   11   368999999863221111     1   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccc---cccCCCcccc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAA---EMYEDGVMAS  240 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~---~~~~~~~~~~  240 (294)
                                     ..|+.+|.+.+.+.+.++.+   .++++++++||.+.++.............   ...  ...++
T Consensus       149 ---------------~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~  211 (254)
T 1sby_A          149 ---------------PVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELL--LSHPT  211 (254)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHH--TTSCC
T ss_pred             ---------------hHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHH--hcCCC
Confidence                           67999999999999998876   68999999999998875211110110000   001  11135


Q ss_pred             ccHHHHHHHHHhhhcCcCCCCe-EEeecc
Q 043792          241 VDLRFYVDAHICVFEDVSSYGR-YLCFNH  268 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~~~~~~-~~~~~~  268 (294)
                      .+++|+|++++.++... ..|+ |.+.++
T Consensus       212 ~~~~dvA~~i~~~~~~~-~~G~~~~v~gG  239 (254)
T 1sby_A          212 QTSEQCGQNFVKAIEAN-KNGAIWKLDLG  239 (254)
T ss_dssp             EEHHHHHHHHHHHHHHC-CTTCEEEEETT
T ss_pred             CCHHHHHHHHHHHHHcC-CCCCEEEEeCC
Confidence            68999999999988743 4454 666554

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.93  E-value=1.4e-24  Score=181.00  Aligned_cols=207  Identities=14%  Similarity=0.061  Sum_probs=148.5

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------   97 (294)
                      +++++|||||+|+||+++++.|+++|++|++++|+.+..+.+..++  .....++.++.+|++|.+++.++++       
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l--~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   80 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEI--RDAGGTALAQVLDVTDRHSVAAFAQAAVDTWG   80 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH--HHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH--HhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999999877666655532  2234578899999999998887775       


Q ss_pred             cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           98 GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                      ++|++|||||.......      ..+..+++|+.++.++++++...   .+..++|++||..++......          
T Consensus        81 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~----------  150 (264)
T 3tfo_A           81 RIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTA----------  150 (264)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTC----------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCC----------
Confidence            68999999997643321      12378999999999888876542   145799999998643221111          


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc-CCeEEEEecCceeCCCCCCCCccccccc-cccCCCccccccHHHH
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR-GISMVSINGGLVMGPDVTISNPYLKGAA-EMYEDGVMASVDLRFY  246 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~ilrp~~i~G~~~~~~~~~~~~~~-~~~~~~~~~~v~v~D~  246 (294)
                                   ..|+.+|.+.+.+.+.++.+. ++++++++||.|.++....   ...... .........+..++|+
T Consensus       151 -------------~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~---~~~~~~~~~~~~~~~~~~~pedv  214 (264)
T 3tfo_A          151 -------------AVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGT---ITHEETMAAMDTYRAIALQPADI  214 (264)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC--------------------------CCCHHHH
T ss_pred             -------------hhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCccccc---ccchhHHHHHHhhhccCCCHHHH
Confidence                         679999999999999988775 8999999999998765221   111111 1111111125789999


Q ss_pred             HHHHHhhhcCcCC
Q 043792          247 VDAHICVFEDVSS  259 (294)
Q Consensus       247 a~~i~~~~~~~~~  259 (294)
                      |++++.++..+..
T Consensus       215 A~~v~~l~s~~~~  227 (264)
T 3tfo_A          215 ARAVRQVIEAPQS  227 (264)
T ss_dssp             HHHHHHHHHSCTT
T ss_pred             HHHHHHHhcCCcc
Confidence            9999999987654

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.93  E-value=1.8e-25  Score=184.94  Aligned_cols=215  Identities=13%  Similarity=0.027  Sum_probs=152.1

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc---cC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK---GC   99 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---~~   99 (294)
                      ..++|+|+||||+|+||+++++.|+++|++|++++|+.++.+.+.+       ..++.++.+|++|++++.++++   ++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~~~i   75 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK-------YPGIQTRVLDVTKKKQIDQFANEVERL   75 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG-------STTEEEEECCTTCHHHHHHHHHHCSCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh-------ccCceEEEeeCCCHHHHHHHHHHhCCC
Confidence            3457899999999999999999999999999999998644333221       1368899999999998887654   68


Q ss_pred             CEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCC
Q 043792          100 SGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERN  170 (294)
Q Consensus       100 d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~  170 (294)
                      |+|||||+......      ...+..+++|+.++.++++++...   .+.+++|++||..+.......    .       
T Consensus        76 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----~-------  144 (246)
T 2ag5_A           76 DVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVN----R-------  144 (246)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTT----B-------
T ss_pred             CEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCC----C-------
Confidence            99999999754321      112377899999999999987532   156799999997532211100    1       


Q ss_pred             CCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc--ccccc-c-ccc-CCCcccccc
Q 043792          171 WSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP--YLKGA-A-EMY-EDGVMASVD  242 (294)
Q Consensus       171 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~--~~~~~-~-~~~-~~~~~~~v~  242 (294)
                                 ..|+.+|.+.+.+.+.++.+.   |++++++|||.++++.......  ..... . ... ......+.+
T Consensus       145 -----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (246)
T 2ag5_A          145 -----------CVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFAT  213 (246)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEE
T ss_pred             -----------ccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCC
Confidence                       679999999999999988764   8999999999999875211000  00000 0 000 001123789


Q ss_pred             HHHHHHHHHhhhcCcC--CCCeEEee
Q 043792          243 LRFYVDAHICVFEDVS--SYGRYLCF  266 (294)
Q Consensus       243 v~D~a~~i~~~~~~~~--~~~~~~~~  266 (294)
                      ++|+|++++.++..+.  .+|+.+..
T Consensus       214 ~~dvA~~v~~l~s~~~~~~tG~~i~v  239 (246)
T 2ag5_A          214 AEEIAMLCVYLASDESAYVTGNPVII  239 (246)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHHHHHHHHHhCccccCCCCCEEEE
Confidence            9999999999986543  35664433

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.93  E-value=1.2e-24  Score=181.56  Aligned_cols=217  Identities=13%  Similarity=0.026  Sum_probs=149.6

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++++||||||+|+||++++++|+++|++|++++|+.++.+.+..++     ..++.++.+|++|.+++.++++     
T Consensus         6 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (261)
T 3n74_A            6 SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI-----GDAALAVAADISKEADVDAAVEAALSK   80 (261)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHh
Confidence            445789999999999999999999999999999999877666655532     3478999999999998888776     


Q ss_pred             --cCCEEEecCCCCCCCC-------cchhhhHhHhhHHHHHHHHHHHhc-------CCCcEEEEecCcceeeeCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS-------TYDELTAEVETMAAHNVLEACAQT-------NTVDKVVFTSSLTAVVWNNHRDNP  161 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~-------~~~~~~~~~n~~~~~~ll~~~~~~-------~~~~~~v~~Ss~~~~~~~~~~~~~  161 (294)
                        ++|+|||||+......       ...++.+++|+.++.++++++...       +...++|++||..+.......   
T Consensus        81 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~---  157 (261)
T 3n74_A           81 FGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNL---  157 (261)
T ss_dssp             HSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTC---
T ss_pred             cCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCc---
Confidence              5799999999754221       112378999999999998887544       013579999997632211111   


Q ss_pred             CCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-cccccccccCC--
Q 043792          162 TSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YLKGAAEMYED--  235 (294)
Q Consensus       162 ~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~~~~~--  235 (294)
                                          ..|+.+|.+.+.+.+.++.+   .++++++++||.+.++....... ........+..  
T Consensus       158 --------------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  217 (261)
T 3n74_A          158 --------------------AWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSI  217 (261)
T ss_dssp             --------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------C
T ss_pred             --------------------cHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcC
Confidence                                67999999999999998877   48999999999998876321110 00000011111  


Q ss_pred             CccccccHHHHHHHHHhhhcCcC--CCCeEE-eec
Q 043792          236 GVMASVDLRFYVDAHICVFEDVS--SYGRYL-CFN  267 (294)
Q Consensus       236 ~~~~~v~v~D~a~~i~~~~~~~~--~~~~~~-~~~  267 (294)
                      ....+++++|+|++++.++....  .+|+.+ +.+
T Consensus       218 ~~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdg  252 (261)
T 3n74_A          218 PMGRLLKPDDLAEAAAFLCSPQASMITGVALDVDG  252 (261)
T ss_dssp             TTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             CcCCCcCHHHHHHHHHHHcCCcccCcCCcEEEecC
Confidence            11228999999999999986433  456644 444

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.93  E-value=9.1e-25  Score=182.72  Aligned_cols=218  Identities=13%  Similarity=0.024  Sum_probs=157.4

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ...+++||||||+|+||+++++.|+++|++|++++|+.++.+.+..++.. ....++.++.+|++|.+++.++++     
T Consensus        17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   95 (266)
T 4egf_A           17 RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGE-QFGTDVHTVAIDLAEPDAPAELARRAAEA   95 (266)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-HHCCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH-hcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999987666555443211 124579999999999998887775     


Q ss_pred             --cCCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc----CCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT----NTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                        ++|++||||+........      .+..+++|+.++.++++++.+.    +...++|++||..++......       
T Consensus        96 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  168 (266)
T 4egf_A           96 FGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDH-------  168 (266)
T ss_dssp             HTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTC-------
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCC-------
Confidence              689999999976533211      1378999999999999887543    124689999998643211111       


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccc---cccC-CCcc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAA---EMYE-DGVM  238 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~---~~~~-~~~~  238 (294)
                                      ..|+.+|.+.+.+.+.++.+   +|+++++++||.|.++...   .......   .... ....
T Consensus       169 ----------------~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~---~~~~~~~~~~~~~~~~p~~  229 (266)
T 4egf_A          169 ----------------YAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQ---RVWGDEAKSAPMIARIPLG  229 (266)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHH---HHTCSHHHHHHHHTTCTTS
T ss_pred             ----------------hHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhh---hhccChHHHHHHHhcCCCC
Confidence                            68999999999999998877   4899999999999876411   0100000   0111 1112


Q ss_pred             ccccHHHHHHHHHhhhcCc--CCCCeEEeec
Q 043792          239 ASVDLRFYVDAHICVFEDV--SSYGRYLCFN  267 (294)
Q Consensus       239 ~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~  267 (294)
                      .+.+++|+|++++.++...  ..+|+.+..+
T Consensus       230 r~~~p~dva~~v~~L~s~~~~~itG~~i~vd  260 (266)
T 4egf_A          230 RFAVPHEVSDAVVWLASDAASMINGVDIPVD  260 (266)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             CCcCHHHHHHHHHHHhCchhcCccCcEEEEC
Confidence            2788999999999998754  3456644433

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.93  E-value=3.3e-24  Score=181.83  Aligned_cols=218  Identities=12%  Similarity=-0.006  Sum_probs=155.1

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC--ChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG--KLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~--~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      .+++++|||||+|+||+++++.|+++|++|++++|+.+  ..+.+.+.  ......++.++.+|++|.++++++++    
T Consensus        47 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  124 (294)
T 3r3s_A           47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKAL--IEECGRKAVLLPGDLSDESFARSLVHKARE  124 (294)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHH--HHHTTCCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHH--HHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999988633  22333331  12234578999999999998887765    


Q ss_pred             ---cCCEEEecCCCCCCCC-----c--chhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHS-----T--YDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~-----~--~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                         ++|++||||+......     .  ..++.+++|+.++.++++++... ..-.+||++||..++......        
T Consensus       125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~--------  196 (294)
T 3r3s_A          125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPHL--------  196 (294)
T ss_dssp             HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCTTC--------
T ss_pred             HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCCCc--------
Confidence               6899999999754221     1  11378999999999999999876 122499999998643211111        


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccccccCC--Cccccc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAAEMYED--GVMASV  241 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~--~~~~~v  241 (294)
                                     ..|+.+|.+.+.+.+.++.+.   |+++++++||.|+++...... ........+..  ....+.
T Consensus       197 ---------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~p~~r~~  260 (294)
T 3r3s_A          197 ---------------LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGG-QTQDKIPQFGQQTPMKRAG  260 (294)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTT-SCGGGSTTTTTTSTTSSCB
T ss_pred             ---------------hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccC-CCHHHHHHHHhcCCCCCCc
Confidence                           679999999999999988775   899999999999886511110 00000011111  112278


Q ss_pred             cHHHHHHHHHhhhcCcC--CCCeE-Eeec
Q 043792          242 DLRFYVDAHICVFEDVS--SYGRY-LCFN  267 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~~--~~~~~-~~~~  267 (294)
                      +++|+|++++.++....  .+|+. .+.+
T Consensus       261 ~p~dvA~~v~~L~s~~~~~itG~~i~vdG  289 (294)
T 3r3s_A          261 QPAELAPVYVYLASQESSYVTAEVHGVCG  289 (294)
T ss_dssp             CGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence            89999999999986543  35664 4444

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.93  E-value=8.6e-25  Score=185.28  Aligned_cols=219  Identities=13%  Similarity=0.023  Sum_probs=153.4

Q ss_pred             CCCCCCCeEEEeCCCch--HHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-
Q 043792           21 DSSNATKTVCVMDASGH--FASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-   97 (294)
Q Consensus        21 ~~~~~~~~vlItGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-   97 (294)
                      +...++|++|||||+|+  ||+++++.|+++|++|++++|+....+.+.+   ......++.++.+|++|.++++++++ 
T Consensus        26 ~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~Dv~d~~~v~~~~~~  102 (293)
T 3grk_A           26 SGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEP---LAEELGAFVAGHCDVADAASIDAVFET  102 (293)
T ss_dssp             -CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHH---HHHHHTCEEEEECCTTCHHHHHHHHHH
T ss_pred             cccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH---HHHhcCCceEEECCCCCHHHHHHHHHH
Confidence            34566789999999988  9999999999999999999998533333332   21122468899999999999888875 


Q ss_pred             ------cCCEEEecCCCCCC----C----Cc--chhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCC
Q 043792           98 ------GCSGLFYSFEPPSD----H----ST--YDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDN  160 (294)
Q Consensus        98 ------~~d~Vih~a~~~~~----~----~~--~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~  160 (294)
                            ++|++||||+....    .    ..  ..+..+++|+.++.++++++... ....++|++||..+.......  
T Consensus       103 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~--  180 (293)
T 3grk_A          103 LEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPNY--  180 (293)
T ss_dssp             HHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCTTT--
T ss_pred             HHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCCch--
Confidence                  57999999997641    1    11  12378999999999999998765 223589999998643211111  


Q ss_pred             CCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc---cccccccccC
Q 043792          161 PTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP---YLKGAAEMYE  234 (294)
Q Consensus       161 ~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~---~~~~~~~~~~  234 (294)
                                           ..|+.+|.+.+.+.+.++.+   +|+++++++||.|.++.......   ..+......+
T Consensus       181 ---------------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p  239 (293)
T 3grk_A          181 ---------------------NVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAP  239 (293)
T ss_dssp             ---------------------THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHST
T ss_pred             ---------------------HHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCC
Confidence                                 68999999999999998876   48999999999998875321110   0000000111


Q ss_pred             CCccccccHHHHHHHHHhhhcCc--CCCCeEEeec
Q 043792          235 DGVMASVDLRFYVDAHICVFEDV--SSYGRYLCFN  267 (294)
Q Consensus       235 ~~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~  267 (294)
                      -  ..+..++|+|++++.++...  ..+|+.+..+
T Consensus       240 ~--~r~~~pedvA~~v~~L~s~~~~~itG~~i~vd  272 (293)
T 3grk_A          240 L--RRTVTIDEVGDVGLYFLSDLSRSVTGEVHHAD  272 (293)
T ss_dssp             T--SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             C--CCCCCHHHHHHHHHHHcCccccCCcceEEEEC
Confidence            1  22788999999999998754  3467654433

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.93  E-value=7.3e-25  Score=182.33  Aligned_cols=215  Identities=15%  Similarity=0.087  Sum_probs=152.9

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------c
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------G   98 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~   98 (294)
                      +++||||||+|+||+++++.|+++|++|++++|+.+..+.+.+++  .....++.++.+|++|.+++.++++       +
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEI--NQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGG   79 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--HHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            578999999999999999999999999999999876555544432  1223568899999999999888876       6


Q ss_pred             CCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc---CC-CcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           99 CSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT---NT-VDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                      +|+|||||+......      ...+..+++|+.++.++++++.+.   .+ .+++|++||..+.. +...    .     
T Consensus        80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-~~~~----~-----  149 (256)
T 1geg_A           80 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV-GNPE----L-----  149 (256)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS-CCTT----B-----
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcC-CCCC----c-----
Confidence            899999998754321      111378999999999888876543   13 57999999975322 1111    1     


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-c-c-----cccc--cccC-C
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-Y-L-----KGAA--EMYE-D  235 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~-~-----~~~~--~~~~-~  235 (294)
                                   ..|+.+|.+.+.+.+.++.+   +++++++++||.+.++....... + .     ....  .... .
T Consensus       150 -------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (256)
T 1geg_A          150 -------------AVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRI  216 (256)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTC
T ss_pred             -------------hhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcC
Confidence                         67999999999999998866   48999999999998764110000 0 0     0000  0000 1


Q ss_pred             CccccccHHHHHHHHHhhhcCc--CCCCeEEe
Q 043792          236 GVMASVDLRFYVDAHICVFEDV--SSYGRYLC  265 (294)
Q Consensus       236 ~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~  265 (294)
                      ....+.+++|+|++++.++..+  ...|+.+.
T Consensus       217 p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~  248 (256)
T 1geg_A          217 TLGRLSEPEDVAACVSYLASPDSDYMTGQSLL  248 (256)
T ss_dssp             TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             CCCCCcCHHHHHHHHHHHhCccccCCCCCEEE
Confidence            1123889999999999998654  23566443

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.93  E-value=3e-24  Score=179.63  Aligned_cols=204  Identities=14%  Similarity=0.146  Sum_probs=153.3

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCC---CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRG---YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--   97 (294)
                      ..++++||||||+|+||+++++.|+++|   ++|++++|+.+..+.+.+   ......++.++.+|++|.+++.++++  
T Consensus        18 ~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~---l~~~~~~~~~~~~Dl~~~~~v~~~~~~~   94 (267)
T 1sny_A           18 GSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED---LAKNHSNIHILEIDLRNFDAYDKLVADI   94 (267)
T ss_dssp             --CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH---HHHHCTTEEEEECCTTCGGGHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHH---hhccCCceEEEEecCCChHHHHHHHHHH
Confidence            4567899999999999999999999999   999999998876655544   22224579999999999999888876  


Q ss_pred             -------cCCEEEecCCCCC-CCC------cchhhhHhHhhHHHHHHHHHHHhc---C------C-----CcEEEEecCc
Q 043792           98 -------GCSGLFYSFEPPS-DHS------TYDELTAEVETMAAHNVLEACAQT---N------T-----VDKVVFTSSL  149 (294)
Q Consensus        98 -------~~d~Vih~a~~~~-~~~------~~~~~~~~~n~~~~~~ll~~~~~~---~------~-----~~~~v~~Ss~  149 (294)
                             ++|+|||||+... ...      ...+..+++|+.++.++++++...   .      +     ..+||++||.
T Consensus        95 ~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~  174 (267)
T 1sny_A           95 EGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSI  174 (267)
T ss_dssp             HHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCG
T ss_pred             HHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecc
Confidence                   6999999999765 211      112378999999999999987643   1      1     4689999998


Q ss_pred             ceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccc
Q 043792          150 TAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYL  226 (294)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~  226 (294)
                      .++.... .             ..+.      ..|+.+|.+.+.+++.++.+   .+++++++|||.|..+....     
T Consensus       175 ~~~~~~~-~-------------~~~~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----  229 (267)
T 1sny_A          175 LGSIQGN-T-------------DGGM------YAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-----  229 (267)
T ss_dssp             GGCSTTC-C-------------SCCC------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-----
T ss_pred             cccccCC-C-------------CCCc------hHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-----
Confidence            6322110 0             0011      67999999999999998877   58999999999997655210     


Q ss_pred             cccccccCCCccccccHHHHHHHHHhhhcCc--CCCCeEEe
Q 043792          227 KGAAEMYEDGVMASVDLRFYVDAHICVFEDV--SSYGRYLC  265 (294)
Q Consensus       227 ~~~~~~~~~~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~  265 (294)
                                 ..++..+|+|+.++.++...  ...|.|+.
T Consensus       230 -----------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~  259 (267)
T 1sny_A          230 -----------SAPLDVPTSTGQIVQTISKLGEKQNGGFVN  259 (267)
T ss_dssp             -----------TCSBCHHHHHHHHHHHHHHCCGGGTTCEEC
T ss_pred             -----------CCCCCHHHHHHHHHHHHHhcCcCCCCcEEc
Confidence                       12578899999999998753  33566654

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.93  E-value=1.8e-24  Score=182.69  Aligned_cols=218  Identities=13%  Similarity=0.026  Sum_probs=152.7

Q ss_pred             CCCCeEEEeCCC--chHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           24 NATKTVCVMDAS--GHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        24 ~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      ..+++||||||+  |+||+++++.|+++|++|++++|+.+..+.+.+   ......++.++.+|++|.+++.++++    
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~---l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   95 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVRE---IAKGFGSDLVVKCDVSLDEDIKNLKKFLEE   95 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH---HHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HHHhcCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence            456899999999  999999999999999999999998742222222   11111247889999999998888775    


Q ss_pred             ---cCCEEEecCCCCCC--------CCc--chhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSD--------HST--YDELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDNPT  162 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~--------~~~--~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~  162 (294)
                         ++|+||||||....        ...  ..+..+++|+.++.++++++.+.  .+.++||++||.++.......    
T Consensus        96 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----  171 (285)
T 2p91_A           96 NWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPHY----  171 (285)
T ss_dssp             HTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCTTT----
T ss_pred             HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCCCc----
Confidence               57999999997542        111  12378999999999999998766  123699999997532211111    


Q ss_pred             CCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCcccccccc-cc-CCCc
Q 043792          163 SHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAAE-MY-EDGV  237 (294)
Q Consensus       163 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~~-~~-~~~~  237 (294)
                                         ..|+.+|.+.+.+.+.++.+.   |+++++++||.++++........ ..... .. ....
T Consensus       172 -------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~p~  231 (285)
T 2p91_A          172 -------------------NVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGF-HLLMEHTTKVNPF  231 (285)
T ss_dssp             -------------------THHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTH-HHHHHHHHHHSTT
T ss_pred             -------------------cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccch-HHHHHHHHhcCCC
Confidence                               679999999999999988764   89999999999998863211100 00000 00 0011


Q ss_pred             cccccHHHHHHHHHhhhcCcC--CCCe-EEeecc
Q 043792          238 MASVDLRFYVDAHICVFEDVS--SYGR-YLCFNH  268 (294)
Q Consensus       238 ~~~v~v~D~a~~i~~~~~~~~--~~~~-~~~~~~  268 (294)
                      ..+.+++|+|++++.++....  ..|+ +.+.++
T Consensus       232 ~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg  265 (285)
T 2p91_A          232 GKPITIEDVGDTAVFLCSDWARAITGEVVHVDNG  265 (285)
T ss_dssp             SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CCCcCHHHHHHHHHHHcCCcccCCCCCEEEECCC
Confidence            127889999999999986533  3565 445443

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.93  E-value=1.7e-24  Score=177.61  Aligned_cols=192  Identities=16%  Similarity=0.028  Sum_probs=138.3

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------   97 (294)
                      ++++|+||||+|+||+++++.|+++|++|++++|+.+..+.+..+      ..++.++.+|++|.+++.++++       
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAE------LEGALPLPGDVREEGDWARAVAAMEEAFG   77 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH------STTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH------hhhceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999999999999999999986555444431      1268899999999998887765       


Q ss_pred             cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHH----HhcCCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEAC----AQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                      ++|+|||+|+......      ...+..+++|+.++.++++++    ++. +.++||++||..++.....     .    
T Consensus        78 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~-----~----  147 (234)
T 2ehd_A           78 ELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRR-GGGTIVNVGSLAGKNPFKG-----G----  147 (234)
T ss_dssp             CCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEECCTTTTSCCTT-----C----
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCcEEEEECCchhcCCCCC-----C----
Confidence            6799999998754321      112378999999998666654    444 6789999999753221100     1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHH
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLR  244 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~  244 (294)
                                    ..|+.+|.+.+.+.+.++.+   .+++++++|||.+.++....       .+..     ..+++++
T Consensus       148 --------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------~~~~-----~~~~~~~  201 (234)
T 2ehd_A          148 --------------AAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGN-------TPGQ-----AWKLKPE  201 (234)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC----------------------------CCHH
T ss_pred             --------------chhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccc-------cccc-----cCCCCHH
Confidence                          67999999999998888765   48999999999997664211       0000     1167999


Q ss_pred             HHHHHHHhhhcCcC
Q 043792          245 FYVDAHICVFEDVS  258 (294)
Q Consensus       245 D~a~~i~~~~~~~~  258 (294)
                      |+|++++.++..+.
T Consensus       202 dvA~~~~~l~~~~~  215 (234)
T 2ehd_A          202 DVAQAVLFALEMPG  215 (234)
T ss_dssp             HHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHhCCCc
Confidence            99999999997653

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.93  E-value=5e-25  Score=184.08  Aligned_cols=219  Identities=12%  Similarity=0.055  Sum_probs=157.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .+++++|||||+|+||+++++.|+++|++|++++|+.++.+.+.+++  .....++.++.+|++|++++.++++      
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   86 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQV--TDTGRRALSVGTDITDDAQVAHLVDETMKAY   86 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--HHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHH--HhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46789999999999999999999999999999999877666555532  2235679999999999999888875      


Q ss_pred             -cCCEEEecCCCCCCCCc-------chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHST-------YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~-------~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                       ++|++||||+.......       ..++.+++|+.++.++++++...   .+ .++|++||..+.......        
T Consensus        87 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~--------  157 (264)
T 3ucx_A           87 GRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKY--------  157 (264)
T ss_dssp             SCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTC--------
T ss_pred             CCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCcc--------
Confidence             57999999976432111       12378999999999999986543   13 699999998643211111        


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc---ccc----ccc-ccc--
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP---YLK----GAA-EMY--  233 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~---~~~----~~~-~~~--  233 (294)
                                     ..|+.+|.+.+.+.+.++.+   +|+++++++||.|+++.......   ...    ... ..+  
T Consensus       158 ---------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (264)
T 3ucx_A          158 ---------------GAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAA  222 (264)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHT
T ss_pred             ---------------HHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhc
Confidence                           67999999999999998877   58999999999998775211000   000    000 000  


Q ss_pred             CCCccccccHHHHHHHHHhhhcCcC--CCCeE-Eeecc
Q 043792          234 EDGVMASVDLRFYVDAHICVFEDVS--SYGRY-LCFNH  268 (294)
Q Consensus       234 ~~~~~~~v~v~D~a~~i~~~~~~~~--~~~~~-~~~~~  268 (294)
                      ......+.+++|+|++++.++....  .+|+. .+.++
T Consensus       223 ~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  260 (264)
T 3ucx_A          223 GSDLKRLPTEDEVASAILFMASDLASGITGQALDVNCG  260 (264)
T ss_dssp             TSSSSSCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCCcccCCCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence            1111228899999999999986543  35664 44443

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.93  E-value=1.8e-24  Score=181.01  Aligned_cols=217  Identities=16%  Similarity=0.132  Sum_probs=154.7

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEec-CCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALH-NHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      ..++++||||||+|+||+++++.|+++|++|+++.+ +.+..+...++  ......++.++.+|++|.+++.++++    
T Consensus        23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~--l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  100 (267)
T 4iiu_A           23 NAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNA--IVANGGNGRLLSFDVANREQCREVLEHEIA  100 (267)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH--HHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHH--HHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            445789999999999999999999999999987664 43333333332  22335679999999999999888776    


Q ss_pred             ---cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHH-----hcCCCcEEEEecCcceeeeCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACA-----QTNTVDKVVFTSSLTAVVWNNHRDNPTS  163 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~-----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~  163 (294)
                         ++|+|||||+.......      ..+..+++|+.++.++++++.     +. +..++|++||..+.......     
T Consensus       101 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~-----  174 (267)
T 4iiu_A          101 QHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGAR-QGGRIITLSSVSGVMGNRGQ-----  174 (267)
T ss_dssp             HHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SCEEEEEECCHHHHHCCTTC-----
T ss_pred             HhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCcEEEEEcchHhccCCCCC-----
Confidence               68999999997654321      123789999999999999864     33 55799999998643322111     


Q ss_pred             CCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccccccCCCcccc
Q 043792          164 HDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMAS  240 (294)
Q Consensus       164 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~  240 (294)
                                        ..|+.+|.+.+.+.+.++.+.   ++++++++||.+.++................  ....+
T Consensus       175 ------------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~--p~~~~  234 (267)
T 4iiu_A          175 ------------------VNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALKEAMSMI--PMKRM  234 (267)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHHHHHHHHHTC--TTCSC
T ss_pred             ------------------chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHHHHHHHHhcC--CCCCC
Confidence                              789999999999888887764   8999999999998876332111111000111  11227


Q ss_pred             ccHHHHHHHHHhhhcCcC--CCCeE-Eeec
Q 043792          241 VDLRFYVDAHICVFEDVS--SYGRY-LCFN  267 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~~--~~~~~-~~~~  267 (294)
                      .+++|+|++++.++....  .+|+. .+.+
T Consensus       235 ~~~edva~~~~~L~s~~~~~itG~~i~vdG  264 (267)
T 4iiu_A          235 GQAEEVAGLASYLMSDIAGYVTRQVISING  264 (267)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cCHHHHHHHHHHHhCCcccCccCCEEEeCC
Confidence            889999999999987543  45664 4444

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.93  E-value=1.9e-24  Score=180.05  Aligned_cols=220  Identities=14%  Similarity=0.014  Sum_probs=152.8

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecC-CCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHN-HGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      ..+++++|||||+|+||+++++.|+++|++|+++.++ .+..+....+  ......++.++.+|++|.+++.++++    
T Consensus         5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (259)
T 3edm_A            5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAE--IEKLGRSALAIKADLTNAAEVEAAISAAAD   82 (259)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHH--HHTTTSCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH--HHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999998554 3333433332  22334578999999999999888876    


Q ss_pred             ---cCCEEEecCCCCCCCC----cc---hhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHS----TY---DELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~----~~---~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                         ++|++||||+......    ..   .++.+++|+.++.++++++... ..-.++|++||..+...+...    .   
T Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----~---  155 (259)
T 3edm_A           83 KFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPG----A---  155 (259)
T ss_dssp             HHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCSTT----C---
T ss_pred             HhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCCC----c---
Confidence               6799999998652211    11   1378999999999999999876 112489999998643122111    1   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhcC--CeEEEEecCceeCCCCCCCCccccccc-cccCC--Cccccc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRG--ISMVSINGGLVMGPDVTISNPYLKGAA-EMYED--GVMASV  241 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~ilrp~~i~G~~~~~~~~~~~~~~-~~~~~--~~~~~v  241 (294)
                                     ..|+.+|.+.+.+.+.++.+.+  +++.+++||.+.++.....   ..... ..+..  ....+.
T Consensus       156 ---------------~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~~p~~r~~  217 (259)
T 3edm_A          156 ---------------LAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTF---TKPEVRERVAGATSLKREG  217 (259)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC-------------------------CCB
T ss_pred             ---------------HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccc---cChHHHHHHHhcCCCCCCc
Confidence                           6799999999999999988754  9999999999987753211   11111 11111  112278


Q ss_pred             cHHHHHHHHHhhhcCcC--CCCe-EEeeccc
Q 043792          242 DLRFYVDAHICVFEDVS--SYGR-YLCFNHV  269 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~~--~~~~-~~~~~~~  269 (294)
                      +++|+|++++.++....  .+|+ +.+.++.
T Consensus       218 ~pedva~~v~~L~s~~~~~itG~~i~vdGg~  248 (259)
T 3edm_A          218 SSEDVAGLVAFLASDDAAYVTGACYDINGGV  248 (259)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESBCS
T ss_pred             CHHHHHHHHHHHcCccccCccCCEEEECCCc
Confidence            89999999999986543  3566 4555544

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.93  E-value=3.3e-25  Score=185.26  Aligned_cols=201  Identities=11%  Similarity=0.056  Sum_probs=148.8

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++||||||+|+||+++++.|+++|++|++++|+.+..+.+        ...++.++.+|++|.+++.++++      
T Consensus        14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   85 (266)
T 3p19_A           14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL--------NLPNTLCAQVDVTDKYTFDTAITRAEKIY   85 (266)
T ss_dssp             -CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTT--------CCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHh--------hcCCceEEEecCCCHHHHHHHHHHHHHHC
Confidence            4568999999999999999999999999999999985433221        12378899999999998888876      


Q ss_pred             -cCCEEEecCCCCCCCCc---c---hhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHST---Y---DELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~---~---~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                       ++|++|||||.......   .   .++.+++|+.++.++++++.    +. +..++|++||..++......        
T Consensus        86 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~IV~isS~~~~~~~~~~--------  156 (266)
T 3p19_A           86 GPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKAR-NCGTIINISSIAGKKTFPDH--------  156 (266)
T ss_dssp             CSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCCTTC--------
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcChhhCCCCCCC--------
Confidence             68999999997543211   1   13789999999999877764    34 56799999998643211111        


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccc-cccCC---Cccc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAA-EMYED---GVMA  239 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~-~~~~~---~~~~  239 (294)
                                     ..|+.+|.+.+.+.+.++.+   +|+++++++||.|.++......   .... ..+..   ....
T Consensus       157 ---------------~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~~~~~~r  218 (266)
T 3p19_A          157 ---------------AAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTT---SQQIKDGYDAWRVDMGG  218 (266)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCS---CHHHHHHHHHHHHHTTC
T ss_pred             ---------------chHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhccc---chhhhHHHHhhcccccC
Confidence                           68999999999999998877   4899999999999877522111   1000 00000   1112


Q ss_pred             cccHHHHHHHHHhhhcCcCC
Q 043792          240 SVDLRFYVDAHICVFEDVSS  259 (294)
Q Consensus       240 ~v~v~D~a~~i~~~~~~~~~  259 (294)
                      +++++|+|++++.++.++..
T Consensus       219 ~~~pedvA~av~~l~~~~~~  238 (266)
T 3p19_A          219 VLAADDVARAVLFAYQQPQN  238 (266)
T ss_dssp             CBCHHHHHHHHHHHHHSCTT
T ss_pred             CCCHHHHHHHHHHHHcCCCC
Confidence            78999999999999987654

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.93  E-value=2.1e-24  Score=183.17  Aligned_cols=216  Identities=13%  Similarity=0.024  Sum_probs=155.9

Q ss_pred             CCCCCeEEEeCCCc--hHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc---
Q 043792           23 SNATKTVCVMDASG--HFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK---   97 (294)
Q Consensus        23 ~~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---   97 (294)
                      ..+++++|||||+|  +||+++++.|+++|++|++++|+.+..+.+.+   .......+.++.+|++|.++++++++   
T Consensus        27 ~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  103 (296)
T 3k31_A           27 LMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDP---LAESLGVKLTVPCDVSDAESVDNMFKVLA  103 (296)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH---HHHHHTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH---HHHhcCCeEEEEcCCCCHHHHHHHHHHHH
Confidence            45678999999997  99999999999999999999998655444433   21122357899999999999888875   


Q ss_pred             ----cCCEEEecCCCCCC--------CCc--chhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCC
Q 043792           98 ----GCSGLFYSFEPPSD--------HST--YDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPT  162 (294)
Q Consensus        98 ----~~d~Vih~a~~~~~--------~~~--~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~  162 (294)
                          ++|++||||+....        ...  .....+++|+.++.++++++... ....++|++||.++......     
T Consensus       104 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~~-----  178 (296)
T 3k31_A          104 EEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVPH-----  178 (296)
T ss_dssp             HHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTT-----
T ss_pred             HHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCCC-----
Confidence                57999999997642        111  12388999999999999998876 22358999999864321111     


Q ss_pred             CCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc---cccccccccCCC
Q 043792          163 SHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP---YLKGAAEMYEDG  236 (294)
Q Consensus       163 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~---~~~~~~~~~~~~  236 (294)
                      .                  ..|+.+|.+.+.+.+.++.+.   ++++++++||.|.++.......   .........+- 
T Consensus       179 ~------------------~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~-  239 (296)
T 3k31_A          179 Y------------------NVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPL-  239 (296)
T ss_dssp             T------------------THHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTT-
T ss_pred             c------------------hhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCC-
Confidence            1                  679999999999999988774   8999999999998876322110   00000001111 


Q ss_pred             ccccccHHHHHHHHHhhhcCc--CCCCeEEee
Q 043792          237 VMASVDLRFYVDAHICVFEDV--SSYGRYLCF  266 (294)
Q Consensus       237 ~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~  266 (294)
                       ..+..++|+|++++.++...  ..+|+.+..
T Consensus       240 -~r~~~pedvA~~v~fL~s~~a~~itG~~i~v  270 (296)
T 3k31_A          240 -RRNTTLDDVGGAALYLLSDLGRGTTGETVHV  270 (296)
T ss_dssp             -SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             -CCCCCHHHHHHHHHHHcCCccCCccCCEEEE
Confidence             12778999999999999753  345764433

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.93  E-value=1.5e-24  Score=182.31  Aligned_cols=217  Identities=17%  Similarity=0.047  Sum_probs=156.1

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++|++|||||+|+||+++++.|+++|++|++++|+.+..+.+..++     ..++.++.+|++|++++.++++      
T Consensus        27 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  101 (277)
T 3gvc_A           27 LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI-----GCGAAACRVDVSDEQQIIAMVDACVAAF  101 (277)
T ss_dssp             CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----CSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCcceEEEecCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999876665554422     3578999999999998887775      


Q ss_pred             -cCCEEEecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS----T--YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                       ++|++||||+......    .  ..++.+++|+.++.++++++...   .+..++|++||..+..... .    .    
T Consensus       102 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~-~----~----  172 (277)
T 3gvc_A          102 GGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVG-G----T----  172 (277)
T ss_dssp             SSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT-T----B----
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCC-C----c----
Confidence             6799999999754321    1  12378999999999999987643   2557899999986322111 1    1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccc-c-cc----CCCcc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAA-E-MY----EDGVM  238 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~-~-~~----~~~~~  238 (294)
                                    ..|+.+|.+.+.+.+.++.+   +|+++++++||.|+++..........+.. . ..    .....
T Consensus       173 --------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (277)
T 3gvc_A          173 --------------GAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQG  238 (277)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHS
T ss_pred             --------------hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhcccc
Confidence                          78999999999999988876   58999999999998774211000000000 0 00    00011


Q ss_pred             ccccHHHHHHHHHhhhcCc--CCCCeE-Eeecc
Q 043792          239 ASVDLRFYVDAHICVFEDV--SSYGRY-LCFNH  268 (294)
Q Consensus       239 ~~v~v~D~a~~i~~~~~~~--~~~~~~-~~~~~  268 (294)
                      .+.+++|+|++++.++...  ..+|+. .+.++
T Consensus       239 r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG  271 (277)
T 3gvc_A          239 RMAAPEEMAGIVVFLLSDDASMITGTTQIADGG  271 (277)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCHHHHHHHHHHHcCCccCCccCcEEEECCc
Confidence            2789999999999999654  345664 44443

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.93  E-value=8.4e-24  Score=173.63  Aligned_cols=207  Identities=14%  Similarity=0.034  Sum_probs=152.7

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------c
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------G   98 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~   98 (294)
                      |++||||||+|+||+++++.|+++|++|++++|+.++.+.+..++. .....++.++.+|++|++++.++++       +
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELM-QEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH-HHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH-hhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            6899999999999999999999999999999998776655544321 1234578999999999999988876       6


Q ss_pred             CCEEEecCCCCCCCC----cc--hhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCC
Q 043792           99 CSGLFYSFEPPSDHS----TY--DELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERN  170 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~----~~--~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~  170 (294)
                      +|++|||||......    ..  .+..+++|+.++.++++++...  .+..++|++||..+.......            
T Consensus        81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~------------  148 (235)
T 3l77_A           81 VDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPYG------------  148 (235)
T ss_dssp             CSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCTTC------------
T ss_pred             CCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCCCc------------
Confidence            899999999754332    11  2378999999999999987643  123577888776532211111            


Q ss_pred             CCChhhhhhccchhHhhHHHHHHHHHHHHHh-cCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHHHHHH
Q 043792          171 WSDVNLCKKFKLWHGLSKTLAEKTAWALAMD-RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDA  249 (294)
Q Consensus       171 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~  249 (294)
                                 ..|+.+|.+.+.+.+.+..+ .++++++++||.+..+....   ... ..     ....++.++|+|++
T Consensus       149 -----------~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~---~~~-~~-----~~~~~~~p~dva~~  208 (235)
T 3l77_A          149 -----------GGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGS---KPG-KP-----KEKGYLKPDEIAEA  208 (235)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTC---CSC-CC-----GGGTCBCHHHHHHH
T ss_pred             -----------chHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccc---cCC-cc-----cccCCCCHHHHHHH
Confidence                       67999999999999988554 38999999999997655211   111 10     11137899999999


Q ss_pred             HHhhhcCcCC--CCeEEe
Q 043792          250 HICVFEDVSS--YGRYLC  265 (294)
Q Consensus       250 i~~~~~~~~~--~~~~~~  265 (294)
                      ++.++..+..  .++.++
T Consensus       209 v~~l~~~~~~~~~~~~~~  226 (235)
T 3l77_A          209 VRCLLKLPKDVRVEELML  226 (235)
T ss_dssp             HHHHHTSCTTCCCCEEEE
T ss_pred             HHHHHcCCCCCccceEEE
Confidence            9999987654  344444

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.93  E-value=1.1e-24  Score=180.30  Aligned_cols=214  Identities=19%  Similarity=0.087  Sum_probs=156.4

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++|++|||||+|+||+++++.|+++|++|++++|+.+..+.+..++     ..++.++.+|++|++++.++++     
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   77 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-----GKKARAIAADISDPGSVKALFAEIQAL   77 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            346789999999999999999999999999999999876655554422     4578999999999999888876     


Q ss_pred             --cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHH----HhcCCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEAC----AQTNTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                        ++|++||||+.......      ..++.+++|+.++.++++++    ++.+...++|++||..+.. +...    .  
T Consensus        78 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-~~~~----~--  150 (247)
T 3rwb_A           78 TGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFA-GTPN----M--  150 (247)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH-TCTT----C--
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhcc-CCCC----c--
Confidence              68999999997643321      11378999999999999884    4442257999999986432 2111    1  


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccc-cccC--CCccc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAA-EMYE--DGVMA  239 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~-~~~~--~~~~~  239 (294)
                                      ..|+.+|.+.+.+.+.++.+   +|+++++++||.|.++......   .... ....  .....
T Consensus       151 ----------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~r  211 (247)
T 3rwb_A          151 ----------------AAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASP---HNEAFGFVEMLQAMKG  211 (247)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSG---GGGGHHHHHHHSSSCS
T ss_pred             ----------------hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccC---hhHHHHHHhcccccCC
Confidence                            78999999999999998877   5899999999999766421110   0000 0000  11112


Q ss_pred             cccHHHHHHHHHhhhcCcC--CCCeEEeec
Q 043792          240 SVDLRFYVDAHICVFEDVS--SYGRYLCFN  267 (294)
Q Consensus       240 ~v~v~D~a~~i~~~~~~~~--~~~~~~~~~  267 (294)
                      +..++|+|++++.++....  .+|+.+..+
T Consensus       212 ~~~pedva~~v~~L~s~~~~~itG~~i~vd  241 (247)
T 3rwb_A          212 KGQPEHIADVVSFLASDDARWITGQTLNVD  241 (247)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             CcCHHHHHHHHHHHhCccccCCCCCEEEEC
Confidence            6789999999999987543  367654433

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.93  E-value=5.1e-24  Score=174.61  Aligned_cols=213  Identities=13%  Similarity=0.046  Sum_probs=156.5

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------   97 (294)
                      |+|+||||||++.||+.+++.|+++|++|.+++|+.+..+.+.      ....++..+.+|++|+++++++++       
T Consensus         1 MnK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~------~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g   74 (247)
T 3ged_A            1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFA------KERPNLFYFHGDVADPLTLKKFVEYAMEKLQ   74 (247)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH------TTCTTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH------HhcCCEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3589999999999999999999999999999999865444333      234678999999999998887764       


Q ss_pred             cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCCCCCCCCCCC
Q 043792           98 GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDER  169 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~  169 (294)
                      ++|++||||+.......      ..++.+++|+.++..+.+++.+.  ++-.++|++||..+.......           
T Consensus        75 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~~~-----------  143 (247)
T 3ged_A           75 RIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEPDS-----------  143 (247)
T ss_dssp             CCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCTTC-----------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCCCC-----------
Confidence            57999999987553321      12388999999999988877544  122689999998643221111           


Q ss_pred             CCCChhhhhhccchhHhhHHHHHHHHHHHHHhc--CCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHHHH
Q 043792          170 NWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR--GISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYV  247 (294)
Q Consensus       170 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a  247 (294)
                                  ..|+.||.....+.+.++.+.  ++++.+|.||.|-.+..   ..+.+......+-++  +...+|+|
T Consensus       144 ------------~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~---~~~~~~~~~~~Pl~R--~g~pediA  206 (247)
T 3ged_A          144 ------------EAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQ---QEFTQEDCAAIPAGK--VGTPKDIS  206 (247)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC------CCHHHHHTSTTSS--CBCHHHHH
T ss_pred             ------------HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCc---HHHHHHHHhcCCCCC--CcCHHHHH
Confidence                        689999999999998888775  79999999999966552   112221111122222  67899999


Q ss_pred             HHHHhhhcCcCCCCeEEeeccccc
Q 043792          248 DAHICVFEDVSSYGRYLCFNHVIN  271 (294)
Q Consensus       248 ~~i~~~~~~~~~~~~~~~~~~~~s  271 (294)
                      .+++.++.....+|+.+..++.+|
T Consensus       207 ~~v~fL~s~~~iTG~~i~VDGG~s  230 (247)
T 3ged_A          207 NMVLFLCQQDFITGETIIVDGGMS  230 (247)
T ss_dssp             HHHHHHHHCSSCCSCEEEESTTGG
T ss_pred             HHHHHHHhCCCCCCCeEEECcCHH
Confidence            999999987666787665555444

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.93  E-value=7.6e-25  Score=182.72  Aligned_cols=218  Identities=13%  Similarity=0.042  Sum_probs=152.6

Q ss_pred             CCCCeEEEeCCC--chHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           24 NATKTVCVMDAS--GHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        24 ~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      .++|+||||||+  |+||+++++.|+++|++|++++|+.+..+.+.+   .......+.++.+|++|++++.++++    
T Consensus         6 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~---l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (261)
T 2wyu_A            6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEK---LAEALGGALLFRADVTQDEELDALFAGVKE   82 (261)
T ss_dssp             CTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHH---HHHHTTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH---HHHhcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence            356899999999  999999999999999999999998642222222   11111247899999999998888776    


Q ss_pred             ---cCCEEEecCCCCCC----------CCcchhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSD----------HSTYDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTS  163 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~----------~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~  163 (294)
                         ++|+|||||+....          .....+..+++|+.++.++++++.+. ..-.+||++||.++.......     
T Consensus        83 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----  157 (261)
T 2wyu_A           83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKY-----  157 (261)
T ss_dssp             HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTC-----
T ss_pred             HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCCCc-----
Confidence               67999999997542          11112378999999999999998765 112589999997532211111     


Q ss_pred             CCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCcccccccc-cc-CCCcc
Q 043792          164 HDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAAE-MY-EDGVM  238 (294)
Q Consensus       164 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~~-~~-~~~~~  238 (294)
                                        ..|+.+|.+.+.+.+.++.+.   |+++++++||.++++........ ..... .. .....
T Consensus       158 ------------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~p~~  218 (261)
T 2wyu_A          158 ------------------NVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGF-TKMYDRVAQTAPLR  218 (261)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTH-HHHHHHHHHHSTTS
T ss_pred             ------------------hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhcccc-HHHHHHHHhcCCCC
Confidence                              679999999999999988775   89999999999998752211000 00000 00 00111


Q ss_pred             ccccHHHHHHHHHhhhcCcC--CCCe-EEeecc
Q 043792          239 ASVDLRFYVDAHICVFEDVS--SYGR-YLCFNH  268 (294)
Q Consensus       239 ~~v~v~D~a~~i~~~~~~~~--~~~~-~~~~~~  268 (294)
                      .+.+++|+|++++.++....  ..|+ +.+.++
T Consensus       219 ~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG  251 (261)
T 2wyu_A          219 RNITQEEVGNLGLFLLSPLASGITGEVVYVDAG  251 (261)
T ss_dssp             SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCHHHHHHHHHHHcChhhcCCCCCEEEECCC
Confidence            27889999999999986533  3465 455444

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.93  E-value=5.4e-24  Score=175.19  Aligned_cols=222  Identities=16%  Similarity=0.045  Sum_probs=162.5

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      +.++|++|||||++.||+.+++.|+++|.+|++++|+.+..+.+.+++  ...+.++.++.+|++|+++++++++     
T Consensus         4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i--~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   81 (254)
T 4fn4_A            4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQEL--RGMGKEVLGVKADVSKKKDVEEFVRRTFET   81 (254)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--HHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHH--HhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            567899999999999999999999999999999999987777666643  2345678999999999999887765     


Q ss_pred             --cCCEEEecCCCCCCCCc----c---hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHST----Y---DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~~----~---~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                        ++|++|||||.......    .   .++.+++|+.++.++.+++.+.   ++-.++|++||..+.......       
T Consensus        82 ~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~-------  154 (254)
T 4fn4_A           82 YSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAG-------  154 (254)
T ss_dssp             HSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSC-------
T ss_pred             cCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCC-------
Confidence              57999999986432211    1   1388999999999888876543   244799999998643322111       


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc---c-ccccc-cccCCCc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP---Y-LKGAA-EMYEDGV  237 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~---~-~~~~~-~~~~~~~  237 (294)
                                      ..|+.+|.+...+.+.++.+.   |+++.+|.||.|-.+.......   . .+... ...+.++
T Consensus       155 ----------------~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R  218 (254)
T 4fn4_A          155 ----------------APYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSR  218 (254)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCC
T ss_pred             ----------------hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCC
Confidence                            679999999999999888764   8999999999997765221110   0 00000 0111122


Q ss_pred             cccccHHHHHHHHHhhhcCcC--CCCeEEeeccccc
Q 043792          238 MASVDLRFYVDAHICVFEDVS--SYGRYLCFNHVIN  271 (294)
Q Consensus       238 ~~~v~v~D~a~~i~~~~~~~~--~~~~~~~~~~~~s  271 (294)
                        +...+|+|.+++.++....  .+|+.+..++.+|
T Consensus       219 --~g~pediA~~v~fLaSd~a~~iTG~~i~VDGG~t  252 (254)
T 4fn4_A          219 --LAEPEDIANVIVFLASDEASFVNGDAVVVDGGLT  252 (254)
T ss_dssp             --CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             --CcCHHHHHHHHHHHhCchhcCCcCCEEEeCCCcc
Confidence              6778999999999986543  3677666655554

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.93  E-value=2.6e-24  Score=177.97  Aligned_cols=208  Identities=17%  Similarity=0.068  Sum_probs=150.8

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++++||||+|+||+++++.|+++|++|++++|+.+..+.+.+++  .....++.++.+|++|++++.++++      
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l--~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   82 (247)
T 2jah_A            5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDEL--TAAGAKVHVLELDVADRQGVDAAVASTVEAL   82 (247)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--HHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH--HhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            45689999999999999999999999999999999876655554432  1224578999999999998887775      


Q ss_pred             -cCCEEEecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS----T--YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                       ++|++|||||......    .  ..+..+++|+.++.++++++...   .+ .++|++||..+......     .    
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~-----~----  152 (247)
T 2jah_A           83 GGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRN-----A----  152 (247)
T ss_dssp             SCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTT-----C----
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCC-----C----
Confidence             6899999998754321    1  12378999999999999987643   14 79999999763221111     1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-cccccccccCCCccccccH
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YLKGAAEMYEDGVMASVDL  243 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~v~v  243 (294)
                                    ..|+.+|.+.+.+.+.++.+   +|+++++++||.+.++....... .........+ +...++++
T Consensus       153 --------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~~~~~~p  217 (247)
T 2jah_A          153 --------------AVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYEQRI-SQIRKLQA  217 (247)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHHHHHHHHT-TTSCCBCH
T ss_pred             --------------cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhhHHHHHhcc-cccCCCCH
Confidence                          67999999999999888766   48999999999998765211000 0000000111 22224899


Q ss_pred             HHHHHHHHhhhcCcC
Q 043792          244 RFYVDAHICVFEDVS  258 (294)
Q Consensus       244 ~D~a~~i~~~~~~~~  258 (294)
                      +|+|++++.++..+.
T Consensus       218 edvA~~v~~l~s~~~  232 (247)
T 2jah_A          218 QDIAEAVRYAVTAPH  232 (247)
T ss_dssp             HHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHHhCCCc
Confidence            999999999987643

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.93  E-value=5.2e-24  Score=181.07  Aligned_cols=220  Identities=14%  Similarity=0.017  Sum_probs=156.2

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC------------ChhhHHHHHhhccCCCCeEEEECCCCChh
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG------------KLQCIEEELINYNEEKKLKVFQADPFDYH   90 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~------------~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~   90 (294)
                      ..+++++|||||+|+||+++++.|+++|++|++++|+..            ..+....+  ......++.++.+|++|.+
T Consensus        25 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dv~~~~  102 (299)
T 3t7c_A           25 KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQ--VEALGRRIIASQVDVRDFD  102 (299)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHH--HHHTTCCEEEEECCTTCHH
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHH--HHhcCCceEEEECCCCCHH
Confidence            456789999999999999999999999999999998732            11222221  2233567899999999999


Q ss_pred             HHHHHhc-------cCCEEEecCCCCCCCC-----cc--hhhhHhHhhHHHHHHHHHHHhc----CCCcEEEEecCccee
Q 043792           91 SLVNALK-------GCSGLFYSFEPPSDHS-----TY--DELTAEVETMAAHNVLEACAQT----NTVDKVVFTSSLTAV  152 (294)
Q Consensus        91 ~~~~~~~-------~~d~Vih~a~~~~~~~-----~~--~~~~~~~n~~~~~~ll~~~~~~----~~~~~~v~~Ss~~~~  152 (294)
                      ++.++++       ++|++||||+......     ..  .+..+++|+.++.++++++...    ++..+||++||..++
T Consensus       103 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~  182 (299)
T 3t7c_A          103 AMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGL  182 (299)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhc
Confidence            9888775       6899999998754332     11  1388999999999999987543    235699999998643


Q ss_pred             eeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc---cc
Q 043792          153 VWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP---YL  226 (294)
Q Consensus       153 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~---~~  226 (294)
                      ......                       ..|+.+|.+.+.+.+.++.+.   |+++.+++||.|.++.......   +.
T Consensus       183 ~~~~~~-----------------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~  239 (299)
T 3t7c_A          183 RGAENI-----------------------GNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFR  239 (299)
T ss_dssp             SCCTTC-----------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHC
T ss_pred             cCCCCc-----------------------chHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhh
Confidence            211111                       689999999999999988775   8999999999999886421100   00


Q ss_pred             ----ccccc-------ccCCCccccccHHHHHHHHHhhhcCcC--CCCeEEeec
Q 043792          227 ----KGAAE-------MYEDGVMASVDLRFYVDAHICVFEDVS--SYGRYLCFN  267 (294)
Q Consensus       227 ----~~~~~-------~~~~~~~~~v~v~D~a~~i~~~~~~~~--~~~~~~~~~  267 (294)
                          .....       ........+..++|+|++++.++....  .+|+.+..+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~p~r~~~pedvA~~v~fL~s~~a~~itG~~i~vd  293 (299)
T 3t7c_A          240 PDLENPTVEDFQVASRQMHVLPIPYVEPADISNAILFLVSDDARYITGVSLPVD  293 (299)
T ss_dssp             TTSSSCCHHHHHHHHHHHSSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             hhhccchhhHHHHHhhhhcccCcCCCCHHHHHHHHHHHhCcccccCcCCEEeeC
Confidence                00000       000011237899999999999996543  457654433

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.93  E-value=6.6e-24  Score=179.39  Aligned_cols=220  Identities=13%  Similarity=0.041  Sum_probs=156.3

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC-------------Chhh---HHHHHhhccCCCCeEEEECCC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG-------------KLQC---IEEELINYNEEKKLKVFQADP   86 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~-------------~~~~---l~~~~~~~~~~~~v~~~~~Dl   86 (294)
                      ...++++|||||+|+||+++++.|+++|++|++++|+..             ..+.   +.++  ......++.++.+|+
T Consensus         8 ~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dv   85 (286)
T 3uve_A            8 RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADL--VKGHNRRIVTAEVDV   85 (286)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHH--HHTTTCCEEEEECCT
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHH--HhhcCCceEEEEcCC
Confidence            456789999999999999999999999999999998732             1222   2221  223356789999999


Q ss_pred             CChhHHHHHhc-------cCCEEEecCCCCCCCC-----cc--hhhhHhHhhHHHHHHHHHHHhc----CCCcEEEEecC
Q 043792           87 FDYHSLVNALK-------GCSGLFYSFEPPSDHS-----TY--DELTAEVETMAAHNVLEACAQT----NTVDKVVFTSS  148 (294)
Q Consensus        87 ~~~~~~~~~~~-------~~d~Vih~a~~~~~~~-----~~--~~~~~~~n~~~~~~ll~~~~~~----~~~~~~v~~Ss  148 (294)
                      +|++++.++++       ++|++||||+......     ..  .+..+++|+.++.++++++...    +...++|++||
T Consensus        86 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS  165 (286)
T 3uve_A           86 RDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSS  165 (286)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECc
Confidence            99999888875       6899999999755432     11  1378999999999999987643    12468999999


Q ss_pred             cceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-
Q 043792          149 LTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-  224 (294)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-  224 (294)
                      ..++......                       ..|+.+|.+.+.+.+.++.+   +++++.+++||.|.++....... 
T Consensus       166 ~~~~~~~~~~-----------------------~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~  222 (286)
T 3uve_A          166 VGGLKAYPHT-----------------------GHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTF  222 (286)
T ss_dssp             GGGTSCCTTC-----------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHH
T ss_pred             hhhccCCCCc-----------------------cHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchh
Confidence            8643211111                       67999999999999998877   58999999999999886432100 


Q ss_pred             --c----ccccc----c---ccCCCccccccHHHHHHHHHhhhcCc--CCCCeEEeec
Q 043792          225 --Y----LKGAA----E---MYEDGVMASVDLRFYVDAHICVFEDV--SSYGRYLCFN  267 (294)
Q Consensus       225 --~----~~~~~----~---~~~~~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~  267 (294)
                        +    .....    .   ........+.+++|+|++++.++...  ..+|+.+..+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vd  280 (286)
T 3uve_A          223 KMFRPDLENPGPDDMAPICQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPID  280 (286)
T ss_dssp             HHHCTTSSSCCHHHHHHHHHTTCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             hhccccccccchhhHHHHHHhhhccCCCcCCHHHHHHHHHHHcCccccCCcCCEEeEC
Confidence              0    00000    0   11111123889999999999998654  3467654433

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.93  E-value=6.4e-24  Score=175.44  Aligned_cols=210  Identities=17%  Similarity=0.065  Sum_probs=152.2

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++|+++||||+|+||+++++.|+++|++|++++|+.++.+.+.+   .   . ++.++.+|++|++++.++++      
T Consensus         3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~---~---~-~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (245)
T 1uls_A            3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAE---A---V-GAHPVVMDVADPASVERGFAEALAHL   75 (245)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---T---T-TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---H---c-CCEEEEecCCCHHHHHHHHHHHHHHc
Confidence            346899999999999999999999999999999998655444433   1   1 37889999999998888775      


Q ss_pred             -cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                       ++|+|||||+.......      ..++.+++|+.++.++++++.+.   .+.+++|++||..  .++...    .    
T Consensus        76 g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~--~~~~~~----~----  145 (245)
T 1uls_A           76 GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV--YLGNLG----Q----  145 (245)
T ss_dssp             SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG--GGCCTT----C----
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch--hcCCCC----c----
Confidence             47999999997543211      12378899999999998887653   2567999999985  322211    1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-cccccccccCCCccccccH
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YLKGAAEMYEDGVMASVDL  243 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~v~v  243 (294)
                                    ..|+.+|.+.+.+.+.++.+   .|+++++++||.+.++....... .........+.  ..+.++
T Consensus       146 --------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~--~~~~~~  209 (245)
T 1uls_A          146 --------------ANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPL--GRAGKP  209 (245)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTT--CSCBCH
T ss_pred             --------------hhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCHHHHHHHHhhCCC--CCCcCH
Confidence                          67999999999999888766   48999999999998775321110 00000001111  128899


Q ss_pred             HHHHHHHHhhhcCcC--CCCeEEee
Q 043792          244 RFYVDAHICVFEDVS--SYGRYLCF  266 (294)
Q Consensus       244 ~D~a~~i~~~~~~~~--~~~~~~~~  266 (294)
                      +|+|++++.++..+.  ..|+.+..
T Consensus       210 ~dvA~~v~~l~s~~~~~~tG~~~~v  234 (245)
T 1uls_A          210 LEVAYAALFLLSDESSFITGQVLFV  234 (245)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHHHHHHHHhCchhcCCcCCEEEE
Confidence            999999999987542  35664433

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.93  E-value=3.8e-24  Score=177.30  Aligned_cols=205  Identities=16%  Similarity=0.099  Sum_probs=149.8

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhcc-CCCCeEEEECCCCChhHHHHHhc----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYN-EEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      ..+++++|||||+|+||+++++.|+++|++|++++|+.++.+.+.+++.... ...++.++.+|++|.+++.++++    
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ   83 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999998876666555332221 22578899999999998887775    


Q ss_pred             ---cCCEEEecCCCCCCCCc--c---hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHST--Y---DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~~--~---~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                         ++|++|||||.......  .   .++.+++|+.++.++++++...   .+..++|++||..+.......        
T Consensus        84 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  155 (250)
T 3nyw_A           84 KYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADG--------  155 (250)
T ss_dssp             HHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCT--------
T ss_pred             hcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCC--------
Confidence               57999999997543221  1   1378999999999999987432   155799999998643311111        


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccccccCCCccccccH
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDL  243 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v  243 (294)
                                     ..|+.+|.+.+.+.+.++.+.   |+++.+++||.+..+..       +......  ....++++
T Consensus       156 ---------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~-------~~~~~~~--~~~~~~~p  211 (250)
T 3nyw_A          156 ---------------GIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMA-------KKAGTPF--KDEEMIQP  211 (250)
T ss_dssp             ---------------THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHH-------HHTTCCS--CGGGSBCH
T ss_pred             ---------------cchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchh-------hhcCCCc--ccccCCCH
Confidence                           689999999999999988774   89999999999965431       1000001  11238899


Q ss_pred             HHHHHHHHhhhcCcCC
Q 043792          244 RFYVDAHICVFEDVSS  259 (294)
Q Consensus       244 ~D~a~~i~~~~~~~~~  259 (294)
                      +|+|++++.++..+..
T Consensus       212 ~dva~~v~~l~s~~~~  227 (250)
T 3nyw_A          212 DDLLNTIRCLLNLSEN  227 (250)
T ss_dssp             HHHHHHHHHHHTSCTT
T ss_pred             HHHHHHHHHHHcCCCc
Confidence            9999999999986543

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.93  E-value=1.5e-24  Score=180.37  Aligned_cols=217  Identities=14%  Similarity=0.051  Sum_probs=153.0

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEe-cCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAAL-HNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      ..++++||||||+|+||+++++.|+++|++|++++ |+.........+  ......++.++.+|++|.+++.++++    
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   87 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLED--QKALGFDFYASEGNVGDWDSTKQAFDKVKA   87 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHH--HHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH--HHhcCCeeEEEecCCCCHHHHHHHHHHHHH
Confidence            45679999999999999999999999999999988 555555444332  22334578999999999998888876    


Q ss_pred             ---cCCEEEecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHS----T--YDELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPTSH  164 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~  164 (294)
                         ++|+|||||+......    .  ..++.+++|+.++.++++++.    +. +..++|++||..+.......      
T Consensus        88 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~------  160 (256)
T 3ezl_A           88 EVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVER-GWGRIINISSVNGQKGQFGQ------  160 (256)
T ss_dssp             HTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCCCGGGSCSCC------
T ss_pred             hcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEEcchhhccCCCCC------
Confidence               5799999999754321    1  123789999999888877764    34 55799999998643221111      


Q ss_pred             CCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-cccccccccCCCcccc
Q 043792          165 DFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YLKGAAEMYEDGVMAS  240 (294)
Q Consensus       165 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~  240 (294)
                                       ..|+.+|.+.+.+.+.++.+   .++++.+++||.+.++....... ..+......  ....+
T Consensus       161 -----------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~--~~~~~  221 (256)
T 3ezl_A          161 -----------------TNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATI--PVRRL  221 (256)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHHS--TTSSC
T ss_pred             -----------------cccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHHHHHhcC--CCCCC
Confidence                             78999999999999988876   48999999999997665211110 000000011  11227


Q ss_pred             ccHHHHHHHHHhhhcCc--CCCCeE-Eeec
Q 043792          241 VDLRFYVDAHICVFEDV--SSYGRY-LCFN  267 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~--~~~~~~-~~~~  267 (294)
                      .+++|+|++++.++...  ..+|+. .+.+
T Consensus       222 ~~~~dva~~~~~l~s~~~~~~tG~~i~vdg  251 (256)
T 3ezl_A          222 GSPDEIGSIVAWLASEESGFSTGADFSLNG  251 (256)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cCHHHHHHHHHHHhCCcccCCcCcEEEECC
Confidence            88999999999998653  345664 4444

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.93  E-value=1.7e-24  Score=180.32  Aligned_cols=215  Identities=13%  Similarity=0.042  Sum_probs=153.2

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC--hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK--LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      +|++|||||+|+||+++++.|+++|++|++++|+.+.  .+.+..++  .....++.++.+|++|++++.++++      
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLI--EAADQKAVFVGLDVTDKANFDSAIDEAAEKL   79 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHH--HTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHH--HhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            5799999999999999999999999999999998765  44444322  2234578999999999998888776      


Q ss_pred             -cCCEEEecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHHHhc---CCC-cEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS----T--YDELTAEVETMAAHNVLEACAQT---NTV-DKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~~~~---~~~-~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                       ++|++||||+......    .  ..+..+++|+.++.++++++.+.   .+. +++|++||..++.....     .   
T Consensus        80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----~---  151 (258)
T 3a28_C           80 GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPI-----L---  151 (258)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTT-----C---
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCC-----c---
Confidence             6899999999754321    1  12378999999999999887653   145 79999999863221111     1   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-c----cc--cc-cccc-C
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-Y----LK--GA-AEMY-E  234 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~----~~--~~-~~~~-~  234 (294)
                                     ..|+.+|.+.+.+.+.++.+   .++++++++||.+.++....... .    ..  .. ...+ .
T Consensus       152 ---------------~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (258)
T 3a28_C          152 ---------------SAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSS  216 (258)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHT
T ss_pred             ---------------hhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHh
Confidence                           67999999999999988866   38999999999997664110000 0    00  00 0000 0


Q ss_pred             -CCccccccHHHHHHHHHhhhcCc--CCCCeEEe
Q 043792          235 -DGVMASVDLRFYVDAHICVFEDV--SSYGRYLC  265 (294)
Q Consensus       235 -~~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~  265 (294)
                       .....+.+++|+|++++.++...  ...|+.+.
T Consensus       217 ~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~  250 (258)
T 3a28_C          217 SIALGRPSVPEDVAGLVSFLASENSNYVTGQVML  250 (258)
T ss_dssp             TCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             cCCCCCccCHHHHHHHHHHHhCcccCCCCCCEEE
Confidence             01122889999999999998654  24566443

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.93  E-value=7e-25  Score=185.17  Aligned_cols=216  Identities=15%  Similarity=0.051  Sum_probs=157.8

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCC---eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc---
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGY---TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK---   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---   97 (294)
                      .+++++|||||+|+||+++++.|+++|+   +|++++|+.+..+.+.+++.......++.++.+|++|.+++.++++   
T Consensus        31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  110 (287)
T 3rku_A           31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP  110 (287)
T ss_dssp             HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred             cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999987   9999999887766665543222224578899999999999998886   


Q ss_pred             ----cCCEEEecCCCCCCCC-----c--chhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCC
Q 043792           98 ----GCSGLFYSFEPPSDHS-----T--YDELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPT  162 (294)
Q Consensus        98 ----~~d~Vih~a~~~~~~~-----~--~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~  162 (294)
                          ++|++|||||......     .  ..++.+++|+.++.++++++.    +. +..++|++||..+.......    
T Consensus       111 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~IV~isS~~~~~~~~~~----  185 (287)
T 3rku_A          111 QEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAK-NSGDIVNLGSIAGRDAYPTG----  185 (287)
T ss_dssp             GGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCCTTC----
T ss_pred             HhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEECChhhcCCCCCC----
Confidence                4799999999654211     1  123889999999999999874    34 55799999998643211111    


Q ss_pred             CCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccc----cccCC
Q 043792          163 SHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAA----EMYED  235 (294)
Q Consensus       163 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~----~~~~~  235 (294)
                                         ..|+.+|.+.+.+.+.++.+   +|+++++++||.|.++...   ....+..    ..+..
T Consensus       186 -------------------~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~---~~~~~~~~~~~~~~~~  243 (287)
T 3rku_A          186 -------------------SIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSL---VRYRGNEEQAKNVYKD  243 (287)
T ss_dssp             -------------------HHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHH---HHTTTCHHHHHHHHTT
T ss_pred             -------------------chHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCcccc---ccccCcHHHHHHhhcc
Confidence                               78999999999999999887   5899999999999876410   0011111    11111


Q ss_pred             CccccccHHHHHHHHHhhhcCcCC--CCe-EEeecc
Q 043792          236 GVMASVDLRFYVDAHICVFEDVSS--YGR-YLCFNH  268 (294)
Q Consensus       236 ~~~~~v~v~D~a~~i~~~~~~~~~--~~~-~~~~~~  268 (294)
                        ..++.++|+|++++.++..+..  .|+ +++.++
T Consensus       244 --~~p~~pedvA~~v~~l~s~~~~~i~g~~i~v~~g  277 (287)
T 3rku_A          244 --TTPLMADDVADLIVYATSRKQNTVIADTLIFPTN  277 (287)
T ss_dssp             --SCCEEHHHHHHHHHHHHTSCTTEEEEEEEEEETT
T ss_pred             --cCCCCHHHHHHHHHHHhCCCCCeEecceEEeeCC
Confidence              1145899999999999976543  344 444443

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.93  E-value=5.8e-24  Score=177.88  Aligned_cols=219  Identities=15%  Similarity=0.098  Sum_probs=155.9

Q ss_pred             CCCCCeEEEeCCCch--HHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc---
Q 043792           23 SNATKTVCVMDASGH--FASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK---   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---   97 (294)
                      ..+++++|||||+|+  ||+++++.|+++|++|++++|+....+.+.+.. ......++.++.+|++|.++++++++   
T Consensus         4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (266)
T 3oig_A            4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELA-GTLDRNDSIILPCDVTNDAEIETCFASIK   82 (266)
T ss_dssp             CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHH-HTSSSCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred             ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHH-HhcCCCCceEEeCCCCCHHHHHHHHHHHH
Confidence            456789999999988  999999999999999999999865444444311 11222378999999999998888775   


Q ss_pred             ----cCCEEEecCCCCCC----C----Cc--chhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCC
Q 043792           98 ----GCSGLFYSFEPPSD----H----ST--YDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPT  162 (294)
Q Consensus        98 ----~~d~Vih~a~~~~~----~----~~--~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~  162 (294)
                          .+|++||+|+....    .    ..  .....+++|+.++.++++++... ..-.++|++||..+.......    
T Consensus        83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~----  158 (266)
T 3oig_A           83 EQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPNY----  158 (266)
T ss_dssp             HHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTT----
T ss_pred             HHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCCCc----
Confidence                57999999987541    1    11  11378899999999999998876 223589999998643211111    


Q ss_pred             CCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc---cccccccccCCC
Q 043792          163 SHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP---YLKGAAEMYEDG  236 (294)
Q Consensus       163 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~---~~~~~~~~~~~~  236 (294)
                                         ..|+.+|.+.+.+.+.++.+.   |+++++++||.+.++.......   .........  .
T Consensus       159 -------------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--~  217 (266)
T 3oig_A          159 -------------------NVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERA--P  217 (266)
T ss_dssp             -------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHS--T
T ss_pred             -------------------chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcC--C
Confidence                               689999999999999988764   7999999999998765221110   000000001  1


Q ss_pred             ccccccHHHHHHHHHhhhcCcC--CCCeEE-eec
Q 043792          237 VMASVDLRFYVDAHICVFEDVS--SYGRYL-CFN  267 (294)
Q Consensus       237 ~~~~v~v~D~a~~i~~~~~~~~--~~~~~~-~~~  267 (294)
                      ...+.+++|+|++++.++....  .+|+.+ +.+
T Consensus       218 ~~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdG  251 (266)
T 3oig_A          218 LRRTTTPEEVGDTAAFLFSDMSRGITGENLHVDS  251 (266)
T ss_dssp             TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCCCHHHHHHHHHHHcCCchhcCcCCEEEECC
Confidence            1127889999999999997543  456644 444

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.93  E-value=1.6e-24  Score=180.94  Aligned_cols=205  Identities=14%  Similarity=0.010  Sum_probs=150.6

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++|+||||||+|+||+++++.|+++|++|++++|+.+.             ..++.++.+|++|.+++.++++      
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   72 (264)
T 2dtx_A            6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-------------EAKYDHIECDVTNPDQVKASIDHIFKEY   72 (264)
T ss_dssp             GTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-------------SCSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-------------CCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            356899999999999999999999999999999998643             1368899999999999888876      


Q ss_pred             -cCCEEEecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS----T--YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                       ++|+|||||+......    .  ..++.+++|+.++.++++++.+.   .+.++||++||..+..... .    .    
T Consensus        73 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-~----~----  143 (264)
T 2dtx_A           73 GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITK-N----A----  143 (264)
T ss_dssp             SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCT-T----B----
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCC-C----c----
Confidence             5899999998754321    1  12378999999999998887643   2567999999986322111 0    1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhcC--CeEEEEecCceeCCCCCCCCccc------cc----cc-ccc-
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRG--ISMVSINGGLVMGPDVTISNPYL------KG----AA-EMY-  233 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~ilrp~~i~G~~~~~~~~~~------~~----~~-~~~-  233 (294)
                                    ..|+.+|.+.+.+.+.++.+.+  +++++++||.+.++....   ..      ..    .. ..+ 
T Consensus       144 --------------~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~---~~~~~~~~~~~~~~~~~~~~~  206 (264)
T 2dtx_A          144 --------------SAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRK---AAELEVGSDPMRIEKKISEWG  206 (264)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHH---HHHHHHCSCHHHHHHHHHHHH
T ss_pred             --------------hhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhh---hhhcccccCchhhHHHHHHHH
Confidence                          6899999999999999987765  999999999997664110   10      00    00 000 


Q ss_pred             -CCCccccccHHHHHHHHHhhhcCcC--CCCeE-Eeec
Q 043792          234 -EDGVMASVDLRFYVDAHICVFEDVS--SYGRY-LCFN  267 (294)
Q Consensus       234 -~~~~~~~v~v~D~a~~i~~~~~~~~--~~~~~-~~~~  267 (294)
                       ......+++++|+|++++.++..+.  ..|+. .+.+
T Consensus       207 ~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG  244 (264)
T 2dtx_A          207 HEHPMQRIGKPQEVASAVAFLASREASFITGTCLYVDG  244 (264)
T ss_dssp             HHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             hcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECC
Confidence             0011238899999999999987543  35664 4444

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.92  E-value=3.9e-24  Score=175.55  Aligned_cols=197  Identities=14%  Similarity=-0.045  Sum_probs=146.1

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------   97 (294)
                      ++++||||||+|+||+++++.|+++|++|++++|+.++.+.+..++     ..++.++.+|++|.++++++++       
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   76 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL-----GNAVIGIVADLAHHEDVDVAFAAAVEWGG   76 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTSHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----cCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            3589999999999999999999999999999999877666655532     1268999999999998887775       


Q ss_pred             cCCEEEecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCCCCCCCCCCC
Q 043792           98 GCSGLFYSFEPPSDHS----T--YDELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDER  169 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~  169 (294)
                      .+|++|||||......    .  ..+..+++|+.++.++++++...  ..-.++|++||..+.. +...    .      
T Consensus        77 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~-~~~~----~------  145 (235)
T 3l6e_A           77 LPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQV-GKAN----E------  145 (235)
T ss_dssp             SCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCS-SCSS----H------
T ss_pred             CCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcC-CCCC----C------
Confidence            5799999999754321    1  12378999999999999987543  1113999999975322 1111    1      


Q ss_pred             CCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHHH
Q 043792          170 NWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFY  246 (294)
Q Consensus       170 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~  246 (294)
                                  ..|+.||.+.+.+.+.++.+.   |+++++++||.+..+......   .       .....+.+++|+
T Consensus       146 ------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~---~-------~~~~~~~~pedv  203 (235)
T 3l6e_A          146 ------------SLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTD---H-------VDPSGFMTPEDA  203 (235)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC---------------------CBCHHHH
T ss_pred             ------------cHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccC---C-------CCCcCCCCHHHH
Confidence                        679999999999999998764   799999999999665421100   0       011138899999


Q ss_pred             HHHHHhhhcCcCC
Q 043792          247 VDAHICVFEDVSS  259 (294)
Q Consensus       247 a~~i~~~~~~~~~  259 (294)
                      |++++.++..+..
T Consensus       204 A~~v~~l~~~~~~  216 (235)
T 3l6e_A          204 AAYMLDALEARSS  216 (235)
T ss_dssp             HHHHHHHTCCCSS
T ss_pred             HHHHHHHHhCCCC
Confidence            9999999976543

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.92  E-value=1.7e-24  Score=181.16  Aligned_cols=224  Identities=17%  Similarity=0.061  Sum_probs=152.5

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------   97 (294)
                      ++++|+||||+|+||+++++.|+++|++|++++|+.+..+.+.+++.......++.++.+|++|++++.++++       
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   85 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            4679999999999999999999999999999999876554443322111113468899999999998888776       


Q ss_pred             cCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHH----HHhcC--CCcEEEEecCcceeeeCCCCCCCCCCCCCCCCC
Q 043792           98 GCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEA----CAQTN--TVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNW  171 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~----~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~  171 (294)
                      ++|+|||||+...  ....++.+++|+.++.++.++    +++.+  +.+++|++||..++.....     .        
T Consensus        86 ~id~lv~~Ag~~~--~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----~--------  150 (267)
T 2gdz_A           86 RLDILVNNAGVNN--EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQ-----Q--------  150 (267)
T ss_dssp             CCCEEEECCCCCC--SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT-----C--------
T ss_pred             CCCEEEECCCCCC--hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCC-----C--------
Confidence            3699999999754  223347899999876665554    43331  1579999999863221111     1        


Q ss_pred             CChhhhhhccchhHhhHHHHHHHHHHHH--H---hcCCeEEEEecCceeCCCCCCCCc-ccccccc-c---c--CCCccc
Q 043792          172 SDVNLCKKFKLWHGLSKTLAEKTAWALA--M---DRGISMVSINGGLVMGPDVTISNP-YLKGAAE-M---Y--EDGVMA  239 (294)
Q Consensus       172 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~--~---~~~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~-~---~--~~~~~~  239 (294)
                                ..|+.+|.+.+.+.+.++  .   ..++++++++||.+.++....... ...+... .   .  +.+...
T Consensus       151 ----------~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (267)
T 2gdz_A          151 ----------PVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYG  220 (267)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHC
T ss_pred             ----------chHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhcccc
Confidence                      679999999999988742  2   358999999999997764110000 0000000 0   0  001123


Q ss_pred             cccHHHHHHHHHhhhcCcCCCCe-EEeec-ccccHH
Q 043792          240 SVDLRFYVDAHICVFEDVSSYGR-YLCFN-HVINCN  273 (294)
Q Consensus       240 ~v~v~D~a~~i~~~~~~~~~~~~-~~~~~-~~~s~~  273 (294)
                      +++++|+|++++.++..+...|+ +.+.+ +..++.
T Consensus       221 ~~~~~dvA~~v~~l~s~~~~~G~~~~v~gg~~~~~~  256 (267)
T 2gdz_A          221 ILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQ  256 (267)
T ss_dssp             CBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEEC
T ss_pred             CCCHHHHHHHHHHHhcCcCCCCcEEEecCCCccccc
Confidence            78999999999999987666676 55554 344443

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.92  E-value=4.4e-24  Score=179.83  Aligned_cols=212  Identities=12%  Similarity=0.037  Sum_probs=149.3

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      +.+++++|||||+|+||+++++.|+++|++|++++|+.+..+.+.+++.. .....+.++.+|++|++++.++++     
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  108 (281)
T 4dry_A           30 SGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGG-RTGNIVRAVVCDVGDPDQVAALFAAVRAE  108 (281)
T ss_dssp             ----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-HHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-cCCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999987766555543211 112336899999999998888775     


Q ss_pred             --cCCEEEecCCCCCCCC-----c--chhhhHhHhhHHHHHHHHHHHhc---CC--CcEEEEecCcceeeeCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS-----T--YDELTAEVETMAAHNVLEACAQT---NT--VDKVVFTSSLTAVVWNNHRDNPTS  163 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~-----~--~~~~~~~~n~~~~~~ll~~~~~~---~~--~~~~v~~Ss~~~~~~~~~~~~~~~  163 (294)
                        ++|++|||||......     .  ..++.+++|+.++.++++++.+.   .+  ..++|++||..+.......     
T Consensus       109 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~-----  183 (281)
T 4dry_A          109 FARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNS-----  183 (281)
T ss_dssp             HSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTC-----
T ss_pred             cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCC-----
Confidence              5699999999754321     1  11378999999998888876543   12  4699999998643211111     


Q ss_pred             CCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCC-Cccc
Q 043792          164 HDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYED-GVMA  239 (294)
Q Consensus       164 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~-~~~~  239 (294)
                                        ..|+.+|.+.+.+.+.++.+   +++++.+++||.|..+....   +..+....... ....
T Consensus       184 ------------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~---~~~~~~~~~~~~~~~~  242 (281)
T 4dry_A          184 ------------------APYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTAR---MSTGVLQANGEVAAEP  242 (281)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC----------CEEECTTSCEEECC
T ss_pred             ------------------hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhh---hcchhhhhhhcccccC
Confidence                              78999999999999998876   58999999999998765321   11111111111 1112


Q ss_pred             cccHHHHHHHHHhhhcCcCCCC
Q 043792          240 SVDLRFYVDAHICVFEDVSSYG  261 (294)
Q Consensus       240 ~v~v~D~a~~i~~~~~~~~~~~  261 (294)
                      ++.++|+|++++.++..+....
T Consensus       243 ~~~pedvA~~v~fL~s~~~~~~  264 (281)
T 4dry_A          243 TIPIEHIAEAVVYMASLPLSAN  264 (281)
T ss_dssp             CBCHHHHHHHHHHHHHSCTTEE
T ss_pred             CCCHHHHHHHHHHHhCCCccCc
Confidence            7899999999999998776543

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.92  E-value=8.3e-24  Score=176.97  Aligned_cols=223  Identities=13%  Similarity=0.047  Sum_probs=157.6

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc---cC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK---GC   99 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---~~   99 (294)
                      ..++|++|||||+|+||+++++.|+++|++|++++|+.+..+...+++........+.++.+|++|.+.+.++++   ++
T Consensus         7 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~i   86 (267)
T 3t4x_A            7 QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKV   86 (267)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCC
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCC
Confidence            456789999999999999999999999999999999876665555433222224567889999999999888876   68


Q ss_pred             CEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCC
Q 043792          100 SGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERN  170 (294)
Q Consensus       100 d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~  170 (294)
                      |++||||+........      .++.+++|+.++.++++++.+.   .+..++|++||..++......            
T Consensus        87 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------------  154 (267)
T 3t4x_A           87 DILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEM------------  154 (267)
T ss_dssp             SEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTC------------
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcc------------
Confidence            9999999976543211      1267999999988887766442   255799999998643211111            


Q ss_pred             CCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCC-Ccccccc-----------c-cccC
Q 043792          171 WSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTIS-NPYLKGA-----------A-EMYE  234 (294)
Q Consensus       171 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~-~~~~~~~-----------~-~~~~  234 (294)
                                 ..|+.+|.+.+.+.+.++.+.   ++++.+++||.+.++..... .....+.           . ...+
T Consensus       155 -----------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (267)
T 3t4x_A          155 -----------AHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRP  223 (267)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCT
T ss_pred             -----------hHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCC
Confidence                       789999999999999998775   69999999999977631100 0000000           0 0001


Q ss_pred             -CCccccccHHHHHHHHHhhhcCc--CCCCeE-Eeecc
Q 043792          235 -DGVMASVDLRFYVDAHICVFEDV--SSYGRY-LCFNH  268 (294)
Q Consensus       235 -~~~~~~v~v~D~a~~i~~~~~~~--~~~~~~-~~~~~  268 (294)
                       .....+.+++|+|++++.++...  ..+|+. .+.++
T Consensus       224 ~~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG  261 (267)
T 3t4x_A          224 TSIIQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDGG  261 (267)
T ss_dssp             TCSSCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cccccCccCHHHHHHHHHHHcCccccCccCCeEEECCC
Confidence             11123889999999999998753  345664 44443

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.92  E-value=3.3e-24  Score=179.51  Aligned_cols=211  Identities=13%  Similarity=-0.004  Sum_probs=152.3

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ...+|+||||||+|+||+++++.|+++|++|++++|+....            ...+..+.+|++|.+++.++++     
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~   78 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD------------VNVSDHFKIDVTNEEEVKEAVEKTTKK   78 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C------------TTSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc------------cCceeEEEecCCCHHHHHHHHHHHHHH
Confidence            56689999999999999999999999999999999986432            1257889999999998888875     


Q ss_pred             --cCCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                        ++|++|||||........      .++.+++|+.++.++++++...   .+..++|++||..++......        
T Consensus        79 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  150 (269)
T 3vtz_A           79 YGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNA--------  150 (269)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTC--------
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCC--------
Confidence              689999999975533211      1377899999999999986542   155799999998643221111        


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc--CCeEEEEecCceeCCCCCCCCcc--c------ccccccc--C
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR--GISMVSINGGLVMGPDVTISNPY--L------KGAAEMY--E  234 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ilrp~~i~G~~~~~~~~~--~------~~~~~~~--~  234 (294)
                                     ..|+.||.+.+.+.+.++.+.  ++++++++||.|.++........  .      ......+  .
T Consensus       151 ---------------~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (269)
T 3vtz_A          151 ---------------AAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQ  215 (269)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHH
T ss_pred             ---------------hhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhc
Confidence                           789999999999999998876  79999999999987642100000  0      0000000  0


Q ss_pred             CCccccccHHHHHHHHHhhhcCcC--CCCeE-Eeecc
Q 043792          235 DGVMASVDLRFYVDAHICVFEDVS--SYGRY-LCFNH  268 (294)
Q Consensus       235 ~~~~~~v~v~D~a~~i~~~~~~~~--~~~~~-~~~~~  268 (294)
                      .....+.+++|+|++++.++....  .+|+. .+.++
T Consensus       216 ~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  252 (269)
T 3vtz_A          216 HPMGRIGRPEEVAEVVAFLASDRSSFITGACLTVDGG  252 (269)
T ss_dssp             STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCCCcCHHHHHHHHHHHhCCccCCCcCcEEEECCC
Confidence            111227899999999999987543  35664 44443

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.92  E-value=6e-24  Score=173.96  Aligned_cols=196  Identities=11%  Similarity=-0.031  Sum_probs=144.6

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccC----CE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGC----SG  101 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~----d~  101 (294)
                      ||+||||||+|+||+++++.|+++|++|++++|+.++.+.+..+     ...++.++.+|++|.+++.++++.+    |+
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~   75 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNC-----LSNNVGYRARDLASHQEVEQLFEQLDSIPST   75 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT-----CSSCCCEEECCTTCHHHHHHHHHSCSSCCSE
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-----HhhccCeEeecCCCHHHHHHHHHHHhhcCCE
Confidence            57899999999999999999999999999999987666655542     2457889999999999999998765    99


Q ss_pred             EEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCC
Q 043792          102 LFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSD  173 (294)
Q Consensus       102 Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~  173 (294)
                      |||||+.......      ..++.+++|+.++.++++++...  ....++|++||..+.......               
T Consensus        76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~---------------  140 (230)
T 3guy_A           76 VVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQE---------------  140 (230)
T ss_dssp             EEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCTTC---------------
T ss_pred             EEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCCCC---------------
Confidence            9999987543321      11378999999999999987655  122389999998643211111               


Q ss_pred             hhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHHHHHHH
Q 043792          174 VNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAH  250 (294)
Q Consensus       174 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~i  250 (294)
                              ..|+.+|.+.+.+.+.++.+.   |+++.+++||.+..+....   ...    ..  ....+.+++|+|+++
T Consensus       141 --------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---~~~----~~--~~~~~~~~~dvA~~i  203 (230)
T 3guy_A          141 --------STYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWET---SGK----SL--DTSSFMSAEDAALMI  203 (230)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC-------------------------CCCHHHHHHHH
T ss_pred             --------chhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHh---cCC----CC--CcccCCCHHHHHHHH
Confidence                    789999999999999998875   7999999999997665211   101    01  112388999999999


Q ss_pred             HhhhcCcC
Q 043792          251 ICVFEDVS  258 (294)
Q Consensus       251 ~~~~~~~~  258 (294)
                      +.++.++.
T Consensus       204 ~~l~~~~~  211 (230)
T 3guy_A          204 HGALANIG  211 (230)
T ss_dssp             HHHCCEET
T ss_pred             HHHHhCcC
Confidence            99987554

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.92  E-value=8.3e-24  Score=176.80  Aligned_cols=222  Identities=14%  Similarity=0.014  Sum_probs=157.1

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..+++++|||||+|+||+++++.|+++|++|++++|+.++.+.+.+++.......++.++.+|++|.+++.++++     
T Consensus         5 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (265)
T 3lf2_A            5 DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERT   84 (265)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999877666555533221223358999999999998887765     


Q ss_pred             --cCCEEEecCCCCCCCC----cc--hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS----TY--DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~----~~--~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                        ++|++||||+......    ..  .+..+++|+.++.++++++...   .+..++|++||..+......     .   
T Consensus        85 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----~---  156 (265)
T 3lf2_A           85 LGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPH-----M---  156 (265)
T ss_dssp             HCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTT-----B---
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCC-----c---
Confidence              5799999998754321    11  2378999999999999988643   24568999999863321111     1   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc--cccc-cc----ccc-C-
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP--YLKG-AA----EMY-E-  234 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~--~~~~-~~----~~~-~-  234 (294)
                                     ..|+.+|.+.+.+.+.++.+.   |+++.+++||.+.++.......  ...+ ..    ... . 
T Consensus       157 ---------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (265)
T 3lf2_A          157 ---------------VATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARN  221 (265)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHH
T ss_pred             ---------------hhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhc
Confidence                           789999999999999988774   8999999999997764110000  0000 00    000 0 


Q ss_pred             --CCccccccHHHHHHHHHhhhcCc--CCCCeEEeec
Q 043792          235 --DGVMASVDLRFYVDAHICVFEDV--SSYGRYLCFN  267 (294)
Q Consensus       235 --~~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~  267 (294)
                        .....+..++|+|++++.++...  ..+|+.+..+
T Consensus       222 ~~~p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vd  258 (265)
T 3lf2_A          222 KQIPLGRLGKPIEAARAILFLASPLSAYTTGSHIDVS  258 (265)
T ss_dssp             TTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSEEEEES
T ss_pred             cCCCcCCCcCHHHHHHHHHHHhCchhcCcCCCEEEEC
Confidence              11122788999999999998753  3467654443

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.92  E-value=4.9e-24  Score=179.14  Aligned_cols=215  Identities=13%  Similarity=0.061  Sum_probs=151.6

Q ss_pred             CCCCeEEEeCCC--chHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           24 NATKTVCVMDAS--GHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        24 ~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      .++++|+||||+  |+||+++++.|+++|++|++++|+.+..+.+.+   ......++.++.+|++|.+++.++++    
T Consensus         4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~---l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   80 (275)
T 2pd4_A            4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRP---IAQELNSPYVYELDVSKEEHFKSLYNSVKK   80 (275)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHH---HHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HHHhcCCcEEEEcCCCCHHHHHHHHHHHHH
Confidence            456899999999  999999999999999999999998762222222   11111247889999999998888775    


Q ss_pred             ---cCCEEEecCCCCCC--------CCc--chhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSD--------HST--YDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTS  163 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~--------~~~--~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~  163 (294)
                         ++|++||||+....        ...  ..+..+++|+.++.++++++.+. ..-.+||++||.++.......     
T Consensus        81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----  155 (275)
T 2pd4_A           81 DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHY-----  155 (275)
T ss_dssp             HTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTC-----
T ss_pred             HcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCCCc-----
Confidence               57999999997542        111  12378999999999999998775 112589999997532211111     


Q ss_pred             CCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccc-ccc-CCCcc
Q 043792          164 HDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAA-EMY-EDGVM  238 (294)
Q Consensus       164 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~-~~~-~~~~~  238 (294)
                                        ..|+.+|.+.+.+.+.++.+.   |+++++++||.|.++....... ..... ... .....
T Consensus       156 ------------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p~~  216 (275)
T 2pd4_A          156 ------------------NVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIAD-FRMILKWNEINAPLR  216 (275)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTT-HHHHHHHHHHHSTTS
T ss_pred             ------------------hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccc-cHHHHHHHHhcCCcC
Confidence                              679999999999999988775   8999999999998875211100 00000 000 00111


Q ss_pred             ccccHHHHHHHHHhhhcCc--CCCCeEEe
Q 043792          239 ASVDLRFYVDAHICVFEDV--SSYGRYLC  265 (294)
Q Consensus       239 ~~v~v~D~a~~i~~~~~~~--~~~~~~~~  265 (294)
                      .+.+++|+|++++.++...  ...|+++.
T Consensus       217 ~~~~p~dva~~~~~l~s~~~~~~tG~~~~  245 (275)
T 2pd4_A          217 KNVSLEEVGNAGMYLLSSLSSGVSGEVHF  245 (275)
T ss_dssp             SCCCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             CCCCHHHHHHHHHHHhCccccCCCCCEEE
Confidence            2678999999999998653  23566543

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.92  E-value=1.1e-24  Score=181.39  Aligned_cols=216  Identities=15%  Similarity=0.065  Sum_probs=152.6

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..+++++|||||+|+||+++++.|+++|++|++++|+.+   .+.+     ....++.++.+|++|.+++.++++     
T Consensus         6 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~---~~~~-----~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   77 (257)
T 3tl3_A            6 EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGE---DVVA-----DLGDRARFAAADVTDEAAVASALDLAETM   77 (257)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCH---HHHH-----HTCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             eecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchH---HHHH-----hcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            345789999999999999999999999999999999542   2222     124579999999999999888876     


Q ss_pred             -cCCEEEecCCCCCC----------CCcchhhhHhHhhHHHHHHHHHHHhc-----------CCCcEEEEecCcceeeeC
Q 043792           98 -GCSGLFYSFEPPSD----------HSTYDELTAEVETMAAHNVLEACAQT-----------NTVDKVVFTSSLTAVVWN  155 (294)
Q Consensus        98 -~~d~Vih~a~~~~~----------~~~~~~~~~~~n~~~~~~ll~~~~~~-----------~~~~~~v~~Ss~~~~~~~  155 (294)
                       ++|++||||+....          .....++.+++|+.++.++++++...           .+..++|++||..++...
T Consensus        78 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  157 (257)
T 3tl3_A           78 GTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQ  157 (257)
T ss_dssp             SCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCH
T ss_pred             CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCC
Confidence             78999999986431          11222488999999999999987653           134589999998632211


Q ss_pred             CCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-ccccccc
Q 043792          156 NHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YLKGAAE  231 (294)
Q Consensus       156 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~  231 (294)
                      .                 .      ...|+.+|.+.+.+.+.++.+   +++++++++||.|.++....... ..+....
T Consensus       158 ~-----------------~------~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~  214 (257)
T 3tl3_A          158 I-----------------G------QAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEARASLGK  214 (257)
T ss_dssp             H-----------------H------HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHHHHHHHHH
T ss_pred             C-----------------C------CccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHHHHHHHHh
Confidence            0                 0      167999999999999988876   48999999999998776322110 0000000


Q ss_pred             ccCCCccccccHHHHHHHHHhhhcCcCCCCeEEeecccc
Q 043792          232 MYEDGVMASVDLRFYVDAHICVFEDVSSYGRYLCFNHVI  270 (294)
Q Consensus       232 ~~~~~~~~~v~v~D~a~~i~~~~~~~~~~~~~~~~~~~~  270 (294)
                      ..+. ...+.+++|+|++++.++..+..+|+.+..++.+
T Consensus       215 ~~~~-~~r~~~p~dva~~v~~l~s~~~itG~~i~vdGG~  252 (257)
T 3tl3_A          215 QVPH-PSRLGNPDEYGALAVHIIENPMLNGEVIRLDGAI  252 (257)
T ss_dssp             TSSS-SCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTC
T ss_pred             cCCC-CCCccCHHHHHHHHHHHhcCCCCCCCEEEECCCc
Confidence            1111 0238899999999999998866778755444433

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.92  E-value=2.8e-24  Score=180.24  Aligned_cols=218  Identities=14%  Similarity=0.051  Sum_probs=153.2

Q ss_pred             CCCCCeEEEeCCC--chHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc---
Q 043792           23 SNATKTVCVMDAS--GHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK---   97 (294)
Q Consensus        23 ~~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---   97 (294)
                      ..++|+||||||+  |+||+++++.|+++|++|++++|+....+.+.+   ......++.++.+|++|.+++.++++   
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   87 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITE---FAAEFGSELVFPCDVADDAQIDALFASLK   87 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH---HHHHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHH---HHHHcCCcEEEECCCCCHHHHHHHHHHHH
Confidence            4567999999999  999999999999999999999998544444443   22223458899999999999888876   


Q ss_pred             ----cCCEEEecCCCCCC----C-----Cc--chhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCC
Q 043792           98 ----GCSGLFYSFEPPSD----H-----ST--YDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNP  161 (294)
Q Consensus        98 ----~~d~Vih~a~~~~~----~-----~~--~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~  161 (294)
                          ++|++|||||....    .     ..  .....+++|+.++.++++++... ....++|++||.++.......   
T Consensus        88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~---  164 (271)
T 3ek2_A           88 THWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPNY---  164 (271)
T ss_dssp             HHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTT---
T ss_pred             HHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCCCc---
Confidence                56999999987542    0     11  12388999999999999998765 123589999998643211111   


Q ss_pred             CCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCcccccccccc--CCC
Q 043792          162 TSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAAEMY--EDG  236 (294)
Q Consensus       162 ~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~--~~~  236 (294)
                                          ..|+.+|.+.+.+.+.++.+.   ++++++++||.|.++....... .......+  ...
T Consensus       165 --------------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~  223 (271)
T 3ek2_A          165 --------------------NTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKS-FGKILDFVESNSP  223 (271)
T ss_dssp             --------------------THHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHH-HHHHHHHHHHHST
T ss_pred             --------------------cchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccc-hHHHHHHHHhcCC
Confidence                                689999999999999988764   8999999999998765321110 00000000  011


Q ss_pred             ccccccHHHHHHHHHhhhcCc--CCCCeE-Eeec
Q 043792          237 VMASVDLRFYVDAHICVFEDV--SSYGRY-LCFN  267 (294)
Q Consensus       237 ~~~~v~v~D~a~~i~~~~~~~--~~~~~~-~~~~  267 (294)
                      ...+..++|+|++++.++...  ..+|+. .+.+
T Consensus       224 ~~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdg  257 (271)
T 3ek2_A          224 LKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDS  257 (271)
T ss_dssp             TSSCCCHHHHHHHHHHHHSGGGTTCCSEEEEEST
T ss_pred             cCCCCCHHHHHHHHHHHcCcccCCeeeeEEEECC
Confidence            122788999999999999753  346764 4444

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.92  E-value=6.2e-24  Score=182.74  Aligned_cols=218  Identities=12%  Similarity=0.045  Sum_probs=154.6

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEe-cCCCChhhHHHHHhhccCCCCeEEEECCCCChh------------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAAL-HNHGKLQCIEEELINYNEEKKLKVFQADPFDYH------------   90 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~------------   90 (294)
                      .++++||||||+|+||+++++.|+++|++|++++ |+.+..+.+.+++.. ....++.++.+|++|.+            
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~  122 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNA-RRPNSAITVQADLSNVATAPVSGADGSAP  122 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-HSTTCEEEEECCCSSSCBCC-------CC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-hcCCeEEEEEeeCCCchhccccccccccc
Confidence            4568999999999999999999999999999999 876655555443210 12357899999999998            


Q ss_pred             -----HHHHHhc-------cCCEEEecCCCCCCCC----c--------------c--hhhhHhHhhHHHHHHHHHHHhc-
Q 043792           91 -----SLVNALK-------GCSGLFYSFEPPSDHS----T--------------Y--DELTAEVETMAAHNVLEACAQT-  137 (294)
Q Consensus        91 -----~~~~~~~-------~~d~Vih~a~~~~~~~----~--------------~--~~~~~~~n~~~~~~ll~~~~~~-  137 (294)
                           ++.++++       ++|+||||||......    .              .  .+..+++|+.++.++++++... 
T Consensus       123 ~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m  202 (328)
T 2qhx_A          123 VTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRV  202 (328)
T ss_dssp             BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                 8887775       6899999998754221    1              1  1277999999999999987643 


Q ss_pred             --CC------CcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeE
Q 043792          138 --NT------VDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISM  206 (294)
Q Consensus       138 --~~------~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~  206 (294)
                        .+      ..+||++||..+......     .                  ..|+.+|.+.+.+.+.++.+.   |+++
T Consensus       203 ~~~~~~~~~~~g~IV~isS~~~~~~~~~-----~------------------~~Y~asKaal~~l~~~la~el~~~gIrv  259 (328)
T 2qhx_A          203 AGTPAKHRGTNYSIINMVDAMTNQPLLG-----Y------------------TIYTMAKGALEGLTRSAALELAPLQIRV  259 (328)
T ss_dssp             HHSCGGGSCSCEEEEEECCTTTTSCCTT-----C------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             HhcCCcCCCCCcEEEEECchhhccCCCC-----c------------------HHHHHHHHHHHHHHHHHHHHHhhcCcEE
Confidence              13      579999999853221111     1                  679999999999999988774   8999


Q ss_pred             EEEecCceeCCCCCCCCccccccccccCCCccccccHHHHHHHHHhhhcCc--CCCCeEEeec
Q 043792          207 VSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDV--SSYGRYLCFN  267 (294)
Q Consensus       207 ~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~  267 (294)
                      ++++||.|.++. .......+......+-+ ..+..++|+|++++.++...  ..+|+++..+
T Consensus       260 n~v~PG~v~T~~-~~~~~~~~~~~~~~p~~-~r~~~pedvA~~v~~l~s~~~~~itG~~i~vd  320 (328)
T 2qhx_A          260 NGVGPGLSVLVD-DMPPAVWEGHRSKVPLY-QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVD  320 (328)
T ss_dssp             EEEEESSBSCCC-CSCHHHHHHHHTTCTTT-TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             EEEecCcccCCc-cccHHHHHHHHhhCCCC-CCCCCHHHHHHHHHHHhCccccCccCcEEEEC
Confidence            999999998876 21110000000001111 13788999999999998643  3456654433

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.92  E-value=2.2e-23  Score=175.32  Aligned_cols=222  Identities=12%  Similarity=0.015  Sum_probs=154.4

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC----------ChhhHHHHHh-hccCCCCeEEEECCCCChhH
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG----------KLQCIEEELI-NYNEEKKLKVFQADPFDYHS   91 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~----------~~~~l~~~~~-~~~~~~~v~~~~~Dl~~~~~   91 (294)
                      ...++++|||||+|+||+++++.|+++|++|++++|+..          ..+.+.+... ......++.++.+|++|.++
T Consensus         8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (277)
T 3tsc_A            8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDR   87 (277)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            456789999999999999999999999999999998421          2222221100 12235678999999999999


Q ss_pred             HHHHhc-------cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc----CCCcEEEEecCcceeee
Q 043792           92 LVNALK-------GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT----NTVDKVVFTSSLTAVVW  154 (294)
Q Consensus        92 ~~~~~~-------~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~v~~Ss~~~~~~  154 (294)
                      +.++++       ++|++||||+.......      ..++.+++|+.++.++++++...    +...++|++||..+...
T Consensus        88 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~  167 (277)
T 3tsc_A           88 LRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKM  167 (277)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCC
Confidence            888775       48999999997654321      12378999999999999986543    22468999999864321


Q ss_pred             CCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc--cc---
Q 043792          155 NNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP--YL---  226 (294)
Q Consensus       155 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~--~~---  226 (294)
                      ....                       ..|+.+|.+.+.+.+.++.+.   |+++.+++||.+.++.......  ..   
T Consensus       168 ~~~~-----------------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~  224 (277)
T 3tsc_A          168 QPFM-----------------------IHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAM  224 (277)
T ss_dssp             CSSC-----------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHH
T ss_pred             CCCc-----------------------hhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcc
Confidence            1111                       679999999999999988774   8999999999998775321000  00   


Q ss_pred             --cccc-cccCC-CccccccHHHHHHHHHhhhcCcC--CCCeEEeec
Q 043792          227 --KGAA-EMYED-GVMASVDLRFYVDAHICVFEDVS--SYGRYLCFN  267 (294)
Q Consensus       227 --~~~~-~~~~~-~~~~~v~v~D~a~~i~~~~~~~~--~~~~~~~~~  267 (294)
                        .... ..+.. ....+.+++|+|++++.++....  .+|+.+..+
T Consensus       225 ~~~~~~~~~~~~~~p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vd  271 (277)
T 3tsc_A          225 ETNPQLSHVLTPFLPDWVAEPEDIADTVCWLASDESRKVTAAQIPVD  271 (277)
T ss_dssp             HTCGGGTTTTCCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             cccHHHHHHhhhccCCCCCCHHHHHHHHHHHhCccccCCcCCEEeeC
Confidence              0000 11111 01138899999999999997543  456644333

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.92  E-value=2.1e-23  Score=176.05  Aligned_cols=220  Identities=13%  Similarity=0.030  Sum_probs=154.9

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC-hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK-LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      ..+++++|||||+|+||+++++.|+++|++|++++|+... .+.+.++  ......++.++.+|++|.+++.++++    
T Consensus        26 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  103 (283)
T 1g0o_A           26 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAA--IKKNGSDAACVKANVGVVEDIVRMFEEAVK  103 (283)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH--HHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHH--HHHhCCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999998643 2333222  12234578999999999988877764    


Q ss_pred             ---cCCEEEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHS------TYDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                         ++|+|||||+......      ...+..+++|+.++.++++++.+. .+..++|++||..+.......         
T Consensus       104 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  174 (283)
T 1g0o_A          104 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPK---------  174 (283)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSS---------
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCCC---------
Confidence               5899999999764321      112378999999999999998775 344799999997532211100         


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCC-Ccccc-c---cc---ccc---
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTIS-NPYLK-G---AA---EMY---  233 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~-~~~~~-~---~~---~~~---  233 (294)
                             .      ..|+.+|.+.+.+.+.++.+   +|+++++++||.+.++..... ..+.. +   ..   ..+   
T Consensus       175 -------~------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (283)
T 1g0o_A          175 -------H------AVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAV  241 (283)
T ss_dssp             -------C------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHH
T ss_pred             -------C------cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhh
Confidence                   1      67999999999999988866   489999999999987641100 00000 0   00   000   


Q ss_pred             -CCCccccccHHHHHHHHHhhhcCcC--CCCeEEee
Q 043792          234 -EDGVMASVDLRFYVDAHICVFEDVS--SYGRYLCF  266 (294)
Q Consensus       234 -~~~~~~~v~v~D~a~~i~~~~~~~~--~~~~~~~~  266 (294)
                       ......+.+++|+|++++.++....  .+|+.+..
T Consensus       242 ~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~v  277 (283)
T 1g0o_A          242 QWSPLRRVGLPIDIARVVCFLASNDGGWVTGKVIGI  277 (283)
T ss_dssp             HSCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             cCCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEe
Confidence             1111227899999999999997543  45665433

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.92  E-value=1e-23  Score=178.38  Aligned_cols=219  Identities=15%  Similarity=0.079  Sum_probs=154.3

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC-CChhhHHHHHhhccCCCCeEEEECCCCC----hhHHHHHhc
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNH-GKLQCIEEELINYNEEKKLKVFQADPFD----YHSLVNALK   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~l~~~~~~~~~~~~v~~~~~Dl~~----~~~~~~~~~   97 (294)
                      ..++|++|||||+|+||+++++.|+++|++|++++|+. +..+.+.+++.. ....++.++.+|++|    .+++.++++
T Consensus        20 ~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~~~Dv~~~~~~~~~v~~~~~   98 (288)
T 2x9g_A           20 HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNK-ERSNTAVVCQADLTNSNVLPASCEEIIN   98 (288)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHH-HSTTCEEEEECCCSCSTTHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHh-hcCCceEEEEeecCCccCCHHHHHHHHH
Confidence            34578999999999999999999999999999999987 555555443210 224578999999999    888877765


Q ss_pred             -------cCCEEEecCCCCCCCCc-------------c---hhhhHhHhhHHHHHHHHHHHhc---CC------CcEEEE
Q 043792           98 -------GCSGLFYSFEPPSDHST-------------Y---DELTAEVETMAAHNVLEACAQT---NT------VDKVVF  145 (294)
Q Consensus        98 -------~~d~Vih~a~~~~~~~~-------------~---~~~~~~~n~~~~~~ll~~~~~~---~~------~~~~v~  145 (294)
                             ++|+||||||.......             .   .+..+++|+.++.++++++...   .+      ..++|+
T Consensus        99 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~  178 (288)
T 2x9g_A           99 SCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVN  178 (288)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEE
T ss_pred             HHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEE
Confidence                   68999999987542211             1   1278899999999999987654   12      468999


Q ss_pred             ecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCC
Q 043792          146 TSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTIS  222 (294)
Q Consensus       146 ~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~  222 (294)
                      +||..++.....     .                  ..|+.+|.+.+.+.+.++.+.   |+++++++||.++++. ...
T Consensus       179 isS~~~~~~~~~-----~------------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~~~  234 (288)
T 2x9g_A          179 LCDAMVDQPCMA-----F------------------SLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-AMG  234 (288)
T ss_dssp             ECCTTTTSCCTT-----C------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-TSC
T ss_pred             EecccccCCCCC-----C------------------chHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-ccC
Confidence            999763221111     1                  679999999999999888764   8999999999999886 211


Q ss_pred             CccccccccccCCCcccc-ccHHHHHHHHHhhhcCc--CCCCeEEeecc
Q 043792          223 NPYLKGAAEMYEDGVMAS-VDLRFYVDAHICVFEDV--SSYGRYLCFNH  268 (294)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~-v~v~D~a~~i~~~~~~~--~~~~~~~~~~~  268 (294)
                      ...........+.+  .+ ..++|+|++++.++...  ..+|+++..++
T Consensus       235 ~~~~~~~~~~~p~~--r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdG  281 (288)
T 2x9g_A          235 EEEKDKWRRKVPLG--RREASAEQIADAVIFLVSGSAQYITGSIIKVDG  281 (288)
T ss_dssp             HHHHHHHHHTCTTT--SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             hHHHHHHHhhCCCC--CCCCCHHHHHHHHHHHhCccccCccCCEEEECc
Confidence            10000000001111  25 78999999999998753  33566554433

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.92  E-value=2.6e-24  Score=179.57  Aligned_cols=215  Identities=15%  Similarity=0.067  Sum_probs=155.1

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++|+++||||+|+||+++++.|+++|++|++++|+.++.+.+.++     ...++.++.+|++|.+++.++++     
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~v~~~~~~~~~~   77 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA-----LEAEAIAVVADVSDPKAVEAVFAEALEE   77 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT-----CCSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-----hcCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999987655544441     12468899999999998888775     


Q ss_pred             --cCCEEEecCCCCCCCC----cc--hhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS----TY--DELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~----~~--~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                        ++|++||||+......    ..  .+..+++|+.++.++++++... ....++|++||..++  +...          
T Consensus        78 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~--~~~~----------  145 (263)
T 2a4k_A           78 FGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL--GAFG----------  145 (263)
T ss_dssp             HSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC--CHHH----------
T ss_pred             cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc--CCCC----------
Confidence              4699999998654321    11  1378899999999999998765 123599999998632  1100          


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-cccccccccCCCccccccHH
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YLKGAAEMYEDGVMASVDLR  244 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~v~v~  244 (294)
                                  ...|+.+|.+.+.+.+.++.+   .|+++++++||.+.++....... .........+  ...+.+++
T Consensus       146 ------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p--~~~~~~p~  211 (263)
T 2a4k_A          146 ------------LAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASP--LGRAGRPE  211 (263)
T ss_dssp             ------------HHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTST--TCSCBCHH
T ss_pred             ------------cHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcCHHHHHHHHhcCC--CCCCcCHH
Confidence                        167999999999999888766   38999999999998875321100 0000000011  12378999


Q ss_pred             HHHHHHHhhhcCcC--CCCeEE-eecc
Q 043792          245 FYVDAHICVFEDVS--SYGRYL-CFNH  268 (294)
Q Consensus       245 D~a~~i~~~~~~~~--~~~~~~-~~~~  268 (294)
                      |+|++++.++..+.  ..|+.+ +.++
T Consensus       212 dvA~~v~~l~s~~~~~~tG~~i~vdgG  238 (263)
T 2a4k_A          212 EVAQAALFLLSEESAYITGQALYVDGG  238 (263)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHhCccccCCcCCEEEECCC
Confidence            99999999987543  356654 4443

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.92  E-value=2.5e-23  Score=174.35  Aligned_cols=220  Identities=13%  Similarity=0.024  Sum_probs=155.6

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC-ChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG-KLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      ..+++++|||||+|+||+++++.|+++|++|++++++.. ..+.+.+++  .....++.++.+|++|.+++.++++    
T Consensus        15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   92 (270)
T 3is3_A           15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEI--KALGSDAIAIKADIRQVPEIVKLFDQAVA   92 (270)
T ss_dssp             CCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH--HHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH--HhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999877543 334443322  2235678999999999999888875    


Q ss_pred             ---cCCEEEecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHS----T--YDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                         ++|++||||+......    .  ..++.+++|+.++.++++++.+. ..-.++|++||..+...+...    .    
T Consensus        93 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----~----  164 (270)
T 3is3_A           93 HFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPK----H----  164 (270)
T ss_dssp             HHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCCCTT----C----
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCCCCC----C----
Confidence               5799999999765432    1  12378999999999999998876 123489999997521111111    1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-ccc-------ccc-ccc--
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YLK-------GAA-EMY--  233 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~~-------~~~-~~~--  233 (294)
                                    ..|+.+|.+.+.+.+.++.+   .|+++.+++||.+.++....... ...       ... ...  
T Consensus       165 --------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (270)
T 3is3_A          165 --------------SLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAH  230 (270)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHH
T ss_pred             --------------chhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHh
Confidence                          67999999999999998877   48999999999998875211000 000       000 000  


Q ss_pred             CCCccccccHHHHHHHHHhhhcCcC--CCCeEEee
Q 043792          234 EDGVMASVDLRFYVDAHICVFEDVS--SYGRYLCF  266 (294)
Q Consensus       234 ~~~~~~~v~v~D~a~~i~~~~~~~~--~~~~~~~~  266 (294)
                      ......+.+++|+|++++.++....  .+|+.+..
T Consensus       231 ~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~v  265 (270)
T 3is3_A          231 ASPLHRNGWPQDVANVVGFLVSKEGEWVNGKVLTL  265 (270)
T ss_dssp             HSTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEE
T ss_pred             cCCCCCCCCHHHHHHHHHHHcCCccCCccCcEEEe
Confidence            0111127789999999999986543  45665433

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.92  E-value=7e-24  Score=175.90  Aligned_cols=204  Identities=14%  Similarity=0.079  Sum_probs=146.3

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc-----
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG-----   98 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-----   98 (294)
                      .++++|+||||+|+||+++++.|+++|++|++++|+.++.             ..+.++.+|++|++++.+++++     
T Consensus        19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-------------~~~~~~~~Dl~d~~~v~~~~~~~~~~~   85 (253)
T 2nm0_A           19 HMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP-------------EGFLAVKCDITDTEQVEQAYKEIEETH   85 (253)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-------------TTSEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh-------------ccceEEEecCCCHHHHHHHHHHHHHHc
Confidence            4568999999999999999999999999999999986532             1478899999999988887753     


Q ss_pred             --CCEEEecCCCCCCC------CcchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           99 --CSGLFYSFEPPSDH------STYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        99 --~d~Vih~a~~~~~~------~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                        +|+|||||+.....      ....+..+++|+.++.++++++.+.   .+.++||++||..+.. +.           
T Consensus        86 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-~~-----------  153 (253)
T 2nm0_A           86 GPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLL-GS-----------  153 (253)
T ss_dssp             CSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCC-CH-----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCC-CC-----------
Confidence              69999999875422      2223488999999999999876542   1557999999975321 10           


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccc-cccC-CCcccccc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAA-EMYE-DGVMASVD  242 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~-~~~~-~~~~~~v~  242 (294)
                            +.     ...|+.+|.+.+.+.+.++.+.   ++++++++||.+.++....   +..... .... .....+++
T Consensus       154 ------~~-----~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~---~~~~~~~~~~~~~p~~~~~~  219 (253)
T 2nm0_A          154 ------AG-----QANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKV---LTDEQRANIVSQVPLGRYAR  219 (253)
T ss_dssp             ------HH-----HHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC------------CHHHHHTTCTTCSCBC
T ss_pred             ------CC-----cHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhh---cCHHHHHHHHhcCCCCCCcC
Confidence                  00     1679999999999999988764   7999999999997765221   100000 0000 11123889


Q ss_pred             HHHHHHHHHhhhcCcC--CCCeEEee
Q 043792          243 LRFYVDAHICVFEDVS--SYGRYLCF  266 (294)
Q Consensus       243 v~D~a~~i~~~~~~~~--~~~~~~~~  266 (294)
                      ++|+|++++.++..+.  ..|+.+..
T Consensus       220 p~dvA~~i~~l~s~~~~~~tG~~i~v  245 (253)
T 2nm0_A          220 PEEIAATVRFLASDDASYITGAVIPV  245 (253)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHHHHHHHHHhCccccCCcCcEEEE
Confidence            9999999999987643  35665443

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.92  E-value=4.6e-24  Score=182.77  Aligned_cols=224  Identities=17%  Similarity=0.043  Sum_probs=155.1

Q ss_pred             CCCCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC---------hhhHHHHHh-hccCCCCeEEEECCCCChh
Q 043792           21 DSSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK---------LQCIEEELI-NYNEEKKLKVFQADPFDYH   90 (294)
Q Consensus        21 ~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---------~~~l~~~~~-~~~~~~~v~~~~~Dl~~~~   90 (294)
                      |...++|+||||||+|+||+++++.|+++|++|++++|+...         .+.+.+... ......++.++.+|++|++
T Consensus        41 m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~  120 (317)
T 3oec_A           41 MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLA  120 (317)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence            344567899999999999999999999999999999886321         222221000 1223567899999999999


Q ss_pred             HHHHHhc-------cCCEEEecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHHHhc----CCCcEEEEecCcceee
Q 043792           91 SLVNALK-------GCSGLFYSFEPPSDHS----T--YDELTAEVETMAAHNVLEACAQT----NTVDKVVFTSSLTAVV  153 (294)
Q Consensus        91 ~~~~~~~-------~~d~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~v~~Ss~~~~~  153 (294)
                      ++.++++       ++|++||||+......    .  ..+..+++|+.++.++++++...    +...+||++||..++.
T Consensus       121 ~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~  200 (317)
T 3oec_A          121 SLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLR  200 (317)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSS
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcC
Confidence            9888876       6899999999754321    1  12378999999999999987543    1246899999986432


Q ss_pred             eCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc---cc-
Q 043792          154 WNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP---YL-  226 (294)
Q Consensus       154 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~---~~-  226 (294)
                      ... .    .                  ..|+.+|.+.+.+.+.++.+.   |+++++++||.|+++.......   +. 
T Consensus       201 ~~~-~----~------------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~  257 (317)
T 3oec_A          201 GAP-G----Q------------------SHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLP  257 (317)
T ss_dssp             CCT-T----B------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCT
T ss_pred             CCC-C----C------------------cchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhh
Confidence            111 1    1                  689999999999999998774   8999999999998764211000   00 


Q ss_pred             --ccc-----cc---ccCCCccccccHHHHHHHHHhhhcCcC--CCCeE-Eeec
Q 043792          227 --KGA-----AE---MYEDGVMASVDLRFYVDAHICVFEDVS--SYGRY-LCFN  267 (294)
Q Consensus       227 --~~~-----~~---~~~~~~~~~v~v~D~a~~i~~~~~~~~--~~~~~-~~~~  267 (294)
                        ...     ..   ........|++++|+|++++.++....  .+|+. .+.+
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdG  311 (317)
T 3oec_A          258 HLENPTREDAAELFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDG  311 (317)
T ss_dssp             TCSSCCHHHHHHHHTTTCSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             hccccchhHHHHHHhhhccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECc
Confidence              000     00   001111348899999999999986543  35664 4444

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.92  E-value=9e-24  Score=174.75  Aligned_cols=207  Identities=14%  Similarity=0.073  Sum_probs=146.9

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++||||||+|+||+++++.|+++|++|++++|+.++.+             .+..+.+|++|++++.++++      
T Consensus        13 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (247)
T 1uzm_A           13 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK-------------GLFGVEVDVTDSDAVDRAFTAVEEHQ   79 (247)
T ss_dssp             CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-------------TSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH-------------HhcCeeccCCCHHHHHHHHHHHHHHc
Confidence            45689999999999999999999999999999999865432             22248899999998887775      


Q ss_pred             -cCCEEEecCCCCCCC----C--cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDH----S--TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~----~--~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                       ++|++||||+.....    .  ...+..+++|+.++.++++++.+.   .+.+++|++||..+.. +...    .    
T Consensus        80 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-~~~~----~----  150 (247)
T 1uzm_A           80 GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW-GIGN----Q----  150 (247)
T ss_dssp             SSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC------C----C----
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhcc-CCCC----C----
Confidence             479999999875422    1  112388999999999999987642   2568999999985322 2111    1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-cccccccccCCCccccccH
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YLKGAAEMYEDGVMASVDL  243 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~v~v  243 (294)
                                    ..|+.+|.+.+.+.+.++.+   .++++++++||.+.++....... .........+.  ..+.++
T Consensus       151 --------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~--~~~~~~  214 (247)
T 1uzm_A          151 --------------ANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPA--KRVGTP  214 (247)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTT--CSCBCH
T ss_pred             --------------hhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcCHHHHHHHHhcCCC--CCCcCH
Confidence                          67999999999999988876   48999999999997654110000 00000001111  238899


Q ss_pred             HHHHHHHHhhhcCcC--CCCeE-Eeecc
Q 043792          244 RFYVDAHICVFEDVS--SYGRY-LCFNH  268 (294)
Q Consensus       244 ~D~a~~i~~~~~~~~--~~~~~-~~~~~  268 (294)
                      +|+|++++.++..+.  ..|+. .+.++
T Consensus       215 ~dvA~~~~~l~s~~~~~~~G~~i~vdgG  242 (247)
T 1uzm_A          215 AEVAGVVSFLASEDASYISGAVIPVDGG  242 (247)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHcCccccCCcCCEEEECCC
Confidence            999999999987532  35664 44443

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.92  E-value=8.5e-24  Score=177.16  Aligned_cols=216  Identities=13%  Similarity=0.065  Sum_probs=153.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++||||||+|+||+++++.|+++|++|++++|+.+..+.+.++      ..++.++.+|++|++++.++++      
T Consensus         7 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   80 (270)
T 1yde_A            7 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQE------LPGAVFILCDVTQEDDVKTLVSETIRRF   80 (270)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH------CTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH------hcCCeEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4568999999999999999999999999999999987655544442      1258899999999999888775      


Q ss_pred             -cCCEEEecCCCCCCCCc-------chhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHST-------YDELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~-------~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                       ++|++||||+.......       ..+..+++|+.++.++++++.+.  .+.+++|++||..+.. +...    .    
T Consensus        81 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~-~~~~----~----  151 (270)
T 1yde_A           81 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAI-GQAQ----A----  151 (270)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHH-CCTT----C----
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccC-CCCC----C----
Confidence             68999999987542111       12378999999999999988642  1236999999975322 2111    1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCcccccccc-c----cCCCccc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAE-M----YEDGVMA  239 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~-~----~~~~~~~  239 (294)
                                    ..|+.+|.+.+.+.+.++.+   +|++++++|||.++++.............. .    .......
T Consensus       152 --------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r  217 (270)
T 1yde_A          152 --------------VPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGR  217 (270)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSS
T ss_pred             --------------cccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCC
Confidence                          67999999999999998866   589999999999998742100000000000 0    0011112


Q ss_pred             cccHHHHHHHHHhhhcCc-CCCCe-EEeecc
Q 043792          240 SVDLRFYVDAHICVFEDV-SSYGR-YLCFNH  268 (294)
Q Consensus       240 ~v~v~D~a~~i~~~~~~~-~~~~~-~~~~~~  268 (294)
                      +..++|+|++++.++... ..+|+ +.+.++
T Consensus       218 ~~~p~dva~~v~~L~s~~~~itG~~i~vdGG  248 (270)
T 1yde_A          218 MGQPAEVGAAAVFLASEANFCTGIELLVTGG  248 (270)
T ss_dssp             CBCHHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHcccCCCcCCCEEEECCC
Confidence            788999999999888642 33565 445443

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.92  E-value=3.6e-24  Score=177.58  Aligned_cols=194  Identities=12%  Similarity=0.084  Sum_probs=145.0

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++|+||||||+|+||+++++.|+++|++|++++|+..+.              ....+.+|++|.+++.++++     
T Consensus        19 ~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~--------------~~~~~~~d~~d~~~v~~~~~~~~~~   84 (251)
T 3orf_A           19 SHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPN--------------ADHSFTIKDSGEEEIKSVIEKINSK   84 (251)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT--------------SSEEEECSCSSHHHHHHHHHHHHTT
T ss_pred             cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc--------------cccceEEEeCCHHHHHHHHHHHHHH
Confidence            44578999999999999999999999999999999987542              22457889999998888775     


Q ss_pred             --cCCEEEecCCCCCCCC----c---chhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS----T---YDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~----~---~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                        ++|+|||||+......    .   ..+..+++|+.++.++++++... ..-.+||++||..++. +...    .    
T Consensus        85 ~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-~~~~----~----  155 (251)
T 3orf_A           85 SIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALN-RTSG----M----  155 (251)
T ss_dssp             TCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS-CCTT----B----
T ss_pred             cCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhcc-CCCC----C----
Confidence              3599999999643221    1   12378999999999999998765 1124899999986432 1111    1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh-----cCCeEEEEecCceeCCCCCCCCccccccccccCCCcccccc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD-----RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVD  242 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~  242 (294)
                                    ..|+.+|.+.+.+.+.++.+     .++++++++||.+.++.   .......      .....+++
T Consensus       156 --------------~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~---~~~~~~~------~~~~~~~~  212 (251)
T 3orf_A          156 --------------IAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPT---NRKYMSD------ANFDDWTP  212 (251)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHH---HHHHCTT------SCGGGSBC
T ss_pred             --------------chhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcc---hhhhccc------ccccccCC
Confidence                          78999999999999999877     47999999999996654   1101111      11223889


Q ss_pred             HHHHHHHHHhhhcC---cCCCCe
Q 043792          243 LRFYVDAHICVFED---VSSYGR  262 (294)
Q Consensus       243 v~D~a~~i~~~~~~---~~~~~~  262 (294)
                      ++|+|++++.++..   ....|+
T Consensus       213 ~~dva~~i~~l~~~~~~~~~tG~  235 (251)
T 3orf_A          213 LSEVAEKLFEWSTNSDSRPTNGS  235 (251)
T ss_dssp             HHHHHHHHHHHHHCGGGCCCTTC
T ss_pred             HHHHHHHHHHHhcCccccCCcce
Confidence            99999999999987   344565

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.92  E-value=6.3e-24  Score=178.36  Aligned_cols=215  Identities=12%  Similarity=0.034  Sum_probs=156.5

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .+++++|||||+|+||+++++.|+++|++|++++|+.+..+.+..++  .....++.++.+|++|.+++.++++      
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g  108 (275)
T 4imr_A           31 LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRI--IASGGTAQELAGDLSEAGAGTDLIERAEAIA  108 (275)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHH--HHTTCCEEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHH--HhcCCeEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            56789999999999999999999999999999999988776665532  2245679999999999988887775      


Q ss_pred             cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           98 GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                      ++|++||||+.......      ..+..+++|+.++.++++++...   .+..++|++||..+.......          
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~----------  178 (275)
T 4imr_A          109 PVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVV----------  178 (275)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTB----------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCc----------
Confidence            68999999997543221      11378999999999999987432   155799999998633211101          


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc----cccccc-cccCCCcccc
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP----YLKGAA-EMYEDGVMAS  240 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~----~~~~~~-~~~~~~~~~~  240 (294)
                                   ..|+.||.+.+.+.+.++.+.   ++++++++||.+.++.......    ...... ...+-+  .+
T Consensus       179 -------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~--r~  243 (275)
T 4imr_A          179 -------------TAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMG--RA  243 (275)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTC--SC
T ss_pred             -------------hhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccC--CC
Confidence                         669999999999999988775   8999999999997664110000    000000 000112  27


Q ss_pred             ccHHHHHHHHHhhhcCcC--CCCeEEe
Q 043792          241 VDLRFYVDAHICVFEDVS--SYGRYLC  265 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~~--~~~~~~~  265 (294)
                      ..++|+|++++.++....  .+|+.+.
T Consensus       244 ~~pedvA~~v~fL~s~~a~~itG~~i~  270 (275)
T 4imr_A          244 GRPEEMVGAALFLASEACSFMTGETIF  270 (275)
T ss_dssp             BCGGGGHHHHHHHHSGGGTTCCSCEEE
T ss_pred             cCHHHHHHHHHHHcCcccCCCCCCEEE
Confidence            789999999999987543  3566443

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.92  E-value=7.8e-24  Score=175.87  Aligned_cols=211  Identities=14%  Similarity=0.101  Sum_probs=151.1

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      +|++|||||+|+||+++++.|+++|  +.|++++|+.+..+.+.+++     ..++.++.+|++|.++++++++      
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY-----GDRFFYVVGDITEDSVLKQLVNAAVKGH   76 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH-----GGGEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh-----CCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            5899999999999999999999985  78988899876666555422     2478999999999998888875      


Q ss_pred             -cCCEEEecCCCCCCC----C-c--chhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDH----S-T--YDELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~----~-~--~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                       ++|++||||+.....    . .  ..++.+++|+.++.++++++.    +. + .++|++||..+.......       
T Consensus        77 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~-g~iv~isS~~~~~~~~~~-------  147 (254)
T 3kzv_A           77 GKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKT-N-GNVVFVSSDACNMYFSSW-------  147 (254)
T ss_dssp             SCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEEECCSCCCCSSCCS-------
T ss_pred             CCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-C-CeEEEEcCchhccCCCCc-------
Confidence             579999999974321    1 1  113789999999999999884    44 4 699999998643211111       


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc-CCeEEEEecCceeCCCCCCCCccc-----cccc-cccCC--C
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR-GISMVSINGGLVMGPDVTISNPYL-----KGAA-EMYED--G  236 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~ilrp~~i~G~~~~~~~~~~-----~~~~-~~~~~--~  236 (294)
                                      ..|+.+|.+.+.+.+.++.+. ++++.+++||.+.++.........     .... ..+..  .
T Consensus       148 ----------------~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (254)
T 3kzv_A          148 ----------------GAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKE  211 (254)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHT
T ss_pred             ----------------chHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHh
Confidence                            689999999999999998775 899999999999887632211000     0000 00000  1


Q ss_pred             ccccccHHHHHHHHHhhhcCcC---CCCeEEee
Q 043792          237 VMASVDLRFYVDAHICVFEDVS---SYGRYLCF  266 (294)
Q Consensus       237 ~~~~v~v~D~a~~i~~~~~~~~---~~~~~~~~  266 (294)
                      ...+.+++|+|++++.++....   .+|+++..
T Consensus       212 ~~r~~~p~dva~~v~~L~s~~~~~~itG~~i~v  244 (254)
T 3kzv_A          212 NNQLLDSSVPATVYAKLALHGIPDGVNGQYLSY  244 (254)
T ss_dssp             TC----CHHHHHHHHHHHHHCCCGGGTTCEEET
T ss_pred             cCCcCCcccHHHHHHHHHhhcccCCCCccEEEe
Confidence            1127889999999999987553   46775543

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.92  E-value=1.1e-23  Score=174.27  Aligned_cols=199  Identities=18%  Similarity=0.120  Sum_probs=144.0

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------cC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------GC   99 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~   99 (294)
                      |+++||||+|+||+++++.|+++|++|++++|+.+..+.+.+++     ..++.++.+|++|++++.++++       ++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   75 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVRNRAAIEEMLASLPAEWCNI   75 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHTSCTTTCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            57999999999999999999999999999999876555554422     2478999999999999998876       57


Q ss_pred             CEEEecCCCCC-CCC------cchhhhHhHhhHHHHHHHHHHHh----cCCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792          100 SGLFYSFEPPS-DHS------TYDELTAEVETMAAHNVLEACAQ----TNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus       100 d~Vih~a~~~~-~~~------~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                      |++|||||... ...      ...+..+++|+.++.++++++..    . +..++|++||..+......     .     
T Consensus        76 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~~~~-----~-----  144 (248)
T 3asu_A           76 DILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER-NHGHIINIGSTAGSWPYAG-----G-----  144 (248)
T ss_dssp             CEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCCTT-----C-----
T ss_pred             CEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEccchhccCCCC-----C-----
Confidence            99999999753 111      11237899999999999888763    4 5579999999863221111     1     


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeC-CCCCCCCccccccccccCC--Ccccccc
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMG-PDVTISNPYLKGAAEMYED--GVMASVD  242 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G-~~~~~~~~~~~~~~~~~~~--~~~~~v~  242 (294)
                                   ..|+.+|.+.+.+.+.++.+.   |+++++++||.|.| +....   ...+.......  ....+++
T Consensus       145 -------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~---~~~~~~~~~~~~~~~~~~~~  208 (248)
T 3asu_A          145 -------------NVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNV---RFKGDDGKAEKTYQNTVALT  208 (248)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC-------------------------CCBC
T ss_pred             -------------chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhh---cccCchHHHHHHHhccCCCC
Confidence                         679999999999999988764   89999999999984 54211   00001000000  0112578


Q ss_pred             HHHHHHHHHhhhcCc
Q 043792          243 LRFYVDAHICVFEDV  257 (294)
Q Consensus       243 v~D~a~~i~~~~~~~  257 (294)
                      ++|+|++++.++..+
T Consensus       209 p~dvA~~v~~l~s~~  223 (248)
T 3asu_A          209 PEDVSEAVWWVSTLP  223 (248)
T ss_dssp             HHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHhcCC
Confidence            999999999998764

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.92  E-value=3.4e-24  Score=180.71  Aligned_cols=214  Identities=16%  Similarity=0.085  Sum_probs=155.8

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++     ..++.++.+|++|.+++.++++     
T Consensus        27 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~  101 (281)
T 3ppi_A           27 QFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL-----GNRAEFVSTNVTSEDSVLAAIEAANQL  101 (281)
T ss_dssp             GGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHTTS
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            345789999999999999999999999999999999877666655532     3579999999999999988876     


Q ss_pred             -cCCEEEec-CCCCCCCC--------cc---hhhhHhHhhHHHHHHHHHHHhc---------CCCcEEEEecCcceeeeC
Q 043792           98 -GCSGLFYS-FEPPSDHS--------TY---DELTAEVETMAAHNVLEACAQT---------NTVDKVVFTSSLTAVVWN  155 (294)
Q Consensus        98 -~~d~Vih~-a~~~~~~~--------~~---~~~~~~~n~~~~~~ll~~~~~~---------~~~~~~v~~Ss~~~~~~~  155 (294)
                       ++|++||| ++......        ..   .+..+++|+.++.++++++...         ++-.++|++||..++...
T Consensus       102 ~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  181 (281)
T 3ppi_A          102 GRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQ  181 (281)
T ss_dssp             SEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCC
T ss_pred             CCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCC
Confidence             57999999 44322211        11   2488999999999999987633         134589999998643211


Q ss_pred             CCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccc-c
Q 043792          156 NHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAA-E  231 (294)
Q Consensus       156 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~-~  231 (294)
                      ...                       ..|+.+|.+.+.+.+.++.+.   ++++++++||.|..+......   .... .
T Consensus       182 ~~~-----------------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~---~~~~~~  235 (281)
T 3ppi_A          182 IGQ-----------------------TAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVG---EEALAK  235 (281)
T ss_dssp             TTC-----------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTC---HHHHHH
T ss_pred             CCC-----------------------cccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhccc---HHHHHH
Confidence            111                       789999999999999888774   899999999999765421100   0000 0


Q ss_pred             ccCC-Cc-cccccHHHHHHHHHhhhcCcCCCCeEEeec
Q 043792          232 MYED-GV-MASVDLRFYVDAHICVFEDVSSYGRYLCFN  267 (294)
Q Consensus       232 ~~~~-~~-~~~v~v~D~a~~i~~~~~~~~~~~~~~~~~  267 (294)
                      .... .. ..+.+++|+|++++.++.+...+|+.+..+
T Consensus       236 ~~~~~~~~~~~~~pedvA~~v~~l~s~~~~tG~~i~vd  273 (281)
T 3ppi_A          236 FAANIPFPKRLGTPDEFADAAAFLLTNGYINGEVMRLD  273 (281)
T ss_dssp             HHHTCCSSSSCBCHHHHHHHHHHHHHCSSCCSCEEEES
T ss_pred             HHhcCCCCCCCCCHHHHHHHHHHHHcCCCcCCcEEEEC
Confidence            0001 11 238899999999999998776678754433

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.92  E-value=3.1e-24  Score=178.56  Aligned_cols=226  Identities=10%  Similarity=0.037  Sum_probs=144.3

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc----CCE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG----CSG  101 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~----~d~  101 (294)
                      ||+||||||+|+||+++++.|+++|++|++++|+.++.+             .  .+.+|++|.+++++++++    +|+
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-------------~--~~~~Dl~~~~~v~~~~~~~~~~id~   65 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI-------------A--DLSTAEGRKQAIADVLAKCSKGMDG   65 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-------------C--CTTSHHHHHHHHHHHHTTCTTCCSE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc-------------c--ccccCCCCHHHHHHHHHHhCCCCCE
Confidence            478999999999999999999999999999999865421             0  156899999999988865    499


Q ss_pred             EEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChh---
Q 043792          102 LFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVN---  175 (294)
Q Consensus       102 Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~---  175 (294)
                      |||||+..... ...+..+++|+.++.++++++.+.   .+.+++|++||.+++...... ......+.+.+.....   
T Consensus        66 lv~~Ag~~~~~-~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  143 (257)
T 1fjh_A           66 LVLCAGLGPQT-KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDK-NPLALALEAGEEAKARAIV  143 (257)
T ss_dssp             EEECCCCCTTC-SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGG-CTTHHHHHHTCHHHHHHHH
T ss_pred             EEECCCCCCCc-ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhcccccc-chhhhhhcccchhhhhhhh
Confidence            99999976522 224588999999999999988642   256799999998643211000 0000000000000000   


Q ss_pred             ---hhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCC-Cc-cccccccccCCCccccccHHHHH
Q 043792          176 ---LCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTIS-NP-YLKGAAEMYEDGVMASVDLRFYV  247 (294)
Q Consensus       176 ---~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~-~~-~~~~~~~~~~~~~~~~v~v~D~a  247 (294)
                         ........|+.||.+.+.+.+.++.+   .++++++++||.+.++..... .. ........+......+.+++|+|
T Consensus       144 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA  223 (257)
T 1fjh_A          144 EHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMA  223 (257)
T ss_dssp             HTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTTSCCCTHHHH
T ss_pred             hcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHhcccccCCCCCHHHHH
Confidence               00011268999999999999988776   589999999999988763221 00 00000000011112388999999


Q ss_pred             HHHHhhhcCc--CCCCeEE-eecc
Q 043792          248 DAHICVFEDV--SSYGRYL-CFNH  268 (294)
Q Consensus       248 ~~i~~~~~~~--~~~~~~~-~~~~  268 (294)
                      ++++.++..+  ...|+++ +.++
T Consensus       224 ~~~~~l~~~~~~~~tG~~~~vdgG  247 (257)
T 1fjh_A          224 SVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHhCchhcCCcCCEEEECCC
Confidence            9999998765  3457654 4443

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.92  E-value=2.8e-23  Score=172.32  Aligned_cols=213  Identities=15%  Similarity=0.019  Sum_probs=154.4

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCC--CChhHHHHHhc---
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADP--FDYHSLVNALK---   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl--~~~~~~~~~~~---   97 (294)
                      ..+++++|||||+|+||+++++.|+++|++|++++|+.+..+.+.+++.. ....++.++.+|+  +|.+++.++++   
T Consensus         9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (252)
T 3f1l_A            9 LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINE-ETGRQPQWFILDLLTCTSENCQQLAQRIA   87 (252)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-HHSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-hcCCCceEEEEecccCCHHHHHHHHHHHH
Confidence            35678999999999999999999999999999999987666555443211 1233688999999  88888877765   


Q ss_pred             ----cCCEEEecCCCCCCC----Ccch---hhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCC
Q 043792           98 ----GCSGLFYSFEPPSDH----STYD---ELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTS  163 (294)
Q Consensus        98 ----~~d~Vih~a~~~~~~----~~~~---~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~  163 (294)
                          ++|++||||+.....    ....   ++.+++|+.++.++++++...   .+..++|++||..+.......     
T Consensus        88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~-----  162 (252)
T 3f1l_A           88 VNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANW-----  162 (252)
T ss_dssp             HHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTC-----
T ss_pred             HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCC-----
Confidence                589999999874321    1111   378999999999999987432   256799999998642211111     


Q ss_pred             CCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhcC--CeEEEEecCceeCCCCCCCCccccccccccCCCccccc
Q 043792          164 HDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRG--ISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASV  241 (294)
Q Consensus       164 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v  241 (294)
                                        ..|+.+|.+.+.+.+.++.+.+  +++.+++||.+..+..   ......      .....+.
T Consensus       163 ------------------~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~~---~~~~~~------~~~~~~~  215 (252)
T 3f1l_A          163 ------------------GAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMR---ASAFPT------EDPQKLK  215 (252)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHHH---HHHCTT------CCGGGSB
T ss_pred             ------------------chhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCchh---hhhCCc------cchhccC
Confidence                              6799999999999999988864  8999999999865431   101111      1112377


Q ss_pred             cHHHHHHHHHhhhcCcC--CCCeE-Eeecc
Q 043792          242 DLRFYVDAHICVFEDVS--SYGRY-LCFNH  268 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~~--~~~~~-~~~~~  268 (294)
                      +++|+|+++++++....  .+|+. .+.++
T Consensus       216 ~p~dva~~~~~L~s~~~~~itG~~i~vdgG  245 (252)
T 3f1l_A          216 TPADIMPLYLWLMGDDSRRKTGMTFDAQPG  245 (252)
T ss_dssp             CTGGGHHHHHHHHSGGGTTCCSCEEESSCC
T ss_pred             CHHHHHHHHHHHcCccccCCCCCEEEeCCC
Confidence            89999999999987643  35664 44443

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.92  E-value=4.4e-24  Score=178.44  Aligned_cols=210  Identities=15%  Similarity=0.025  Sum_probs=148.8

Q ss_pred             CCCCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc---
Q 043792           21 DSSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK---   97 (294)
Q Consensus        21 ~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---   97 (294)
                      |...++++||||||+|+||+++++.|+++|++|++++|+.....             ....+.+|++|.+++.++++   
T Consensus        23 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-------------~~~~~~~Dv~~~~~~~~~~~~~~   89 (266)
T 3uxy_A           23 MQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA-------------ADLHLPGDLREAAYADGLPGAVA   89 (266)
T ss_dssp             ---CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC-------------CSEECCCCTTSHHHHHHHHHHHH
T ss_pred             hhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-------------hhhccCcCCCCHHHHHHHHHHHH
Confidence            34556789999999999999999999999999999999765321             22445789999988877664   


Q ss_pred             ----cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHH----HhcCCCcEEEEecCcceeeeCCCCCCCCC
Q 043792           98 ----GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEAC----AQTNTVDKVVFTSSLTAVVWNNHRDNPTS  163 (294)
Q Consensus        98 ----~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~  163 (294)
                          ++|++|||||.......      ..++.+++|+.++.++++++    ++. +..++|++||..++......     
T Consensus        90 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~~~~~-----  163 (266)
T 3uxy_A           90 AGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAA-GGGAIVNVASCWGLRPGPGH-----  163 (266)
T ss_dssp             HHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCSBTTBCCTTB-----
T ss_pred             HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECCHHhCCCCCCC-----
Confidence                68999999997654221      11378899999999999987    344 56799999998633211111     


Q ss_pred             CCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc---ccccc--cccc-C
Q 043792          164 HDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP---YLKGA--AEMY-E  234 (294)
Q Consensus       164 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~---~~~~~--~~~~-~  234 (294)
                                        ..|+.+|.+.+.+.+.++.+.   |+++++++||.+.++.......   .....  .... .
T Consensus       164 ------------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  225 (266)
T 3uxy_A          164 ------------------ALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRT  225 (266)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTT
T ss_pred             ------------------hHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhc
Confidence                              789999999999999988774   8999999999998765211000   00000  0000 0


Q ss_pred             CCccccccHHHHHHHHHhhhcCcC--CCCeE-Eeec
Q 043792          235 DGVMASVDLRFYVDAHICVFEDVS--SYGRY-LCFN  267 (294)
Q Consensus       235 ~~~~~~v~v~D~a~~i~~~~~~~~--~~~~~-~~~~  267 (294)
                      .....+.+++|+|++++.++....  .+|+. .+.+
T Consensus       226 ~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG  261 (266)
T 3uxy_A          226 VPLGRIAEPEDIADVVLFLASDAARYLCGSLVEVNG  261 (266)
T ss_dssp             STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECc
Confidence            111227899999999999987643  35664 4443

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.92  E-value=1.2e-23  Score=173.09  Aligned_cols=207  Identities=15%  Similarity=0.037  Sum_probs=146.8

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------c
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------G   98 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~   98 (294)
                      +|+++||||+|+||+++++.|+++|++|++++|+.++   +.++  .     ++.++.+|++| +++.++++       +
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~--~-----~~~~~~~D~~~-~~~~~~~~~~~~~~g~   70 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQS--L-----GAVPLPTDLEK-DDPKGLVKRALEALGG   70 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHH--H-----TCEEEECCTTT-SCHHHHHHHHHHHHTS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHh--h-----CcEEEecCCch-HHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999998644   2221  2     37889999999 77666553       6


Q ss_pred             CCEEEecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCCCC
Q 043792           99 CSGLFYSFEPPSDHS----T--YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDER  169 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~  169 (294)
                      +|++||||+......    .  ..++.+++|+.++.++++++.+.   .+.+++|++||..++...  .           
T Consensus        71 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--~-----------  137 (239)
T 2ekp_A           71 LHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAG--G-----------  137 (239)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC--T-----------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCC--C-----------
Confidence            899999998654221    1  12378999999999998887432   156899999998632211  0           


Q ss_pred             CCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccc-cccc--cccC-CCcccccc
Q 043792          170 NWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYL-KGAA--EMYE-DGVMASVD  242 (294)
Q Consensus       170 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~-~~~~--~~~~-~~~~~~v~  242 (294)
                        ..+.      ..|+.+|.+.+.+.+.++.+.   |++++++|||.+.++....   .. ....  .... .....+.+
T Consensus       138 --~~~~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~~~p~~~~~~  206 (239)
T 2ekp_A          138 --PVPI------PAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLP---LRQNPELYEPITARIPMGRWAR  206 (239)
T ss_dssp             --TSCC------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHH---HHTCHHHHHHHHTTCTTSSCBC
T ss_pred             --CCCC------ccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhc---cccCHHHHHHHHhcCCCCCCcC
Confidence              0001      679999999999999988764   8999999999998775211   10 0000  0000 11123789


Q ss_pred             HHHHHHHHHhhhcCcC--CCCeEEeec
Q 043792          243 LRFYVDAHICVFEDVS--SYGRYLCFN  267 (294)
Q Consensus       243 v~D~a~~i~~~~~~~~--~~~~~~~~~  267 (294)
                      ++|+|++++.++..+.  ..|+++..+
T Consensus       207 ~~dvA~~~~~l~s~~~~~~tG~~~~vd  233 (239)
T 2ekp_A          207 PEEIARVAAVLCGDEAEYLTGQAVAVD  233 (239)
T ss_dssp             HHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHHHHcCchhcCCCCCEEEEC
Confidence            9999999999986532  356654433

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.92  E-value=4.1e-23  Score=174.35  Aligned_cols=213  Identities=16%  Similarity=0.087  Sum_probs=153.6

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC-------hhhHHHHHhhccCCCCeEEEECCCCChhHHHHH
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK-------LQCIEEELINYNEEKKLKVFQADPFDYHSLVNA   95 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-------~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~   95 (294)
                      +.+++++|||||+|+||+++++.|+++|++|++++|+.++       .+...++  ......++.++.+|++|.+++.++
T Consensus         6 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dv~~~~~v~~~   83 (285)
T 3sc4_A            6 SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKE--IEEAGGQALPIVGDIRDGDAVAAA   83 (285)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHH--HHHHTSEEEEEECCTTSHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHH--HHhcCCcEEEEECCCCCHHHHHHH
Confidence            3467899999999999999999999999999999998763       2222222  122345789999999999988887


Q ss_pred             hc-------cCCEEEecCCCCCCCCc---c---hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCC
Q 043792           96 LK-------GCSGLFYSFEPPSDHST---Y---DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRD  159 (294)
Q Consensus        96 ~~-------~~d~Vih~a~~~~~~~~---~---~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~  159 (294)
                      ++       ++|++|||||.......   .   .++.+++|+.++.++++++...   .+..++|++||..+....... 
T Consensus        84 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~-  162 (285)
T 3sc4_A           84 VAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLR-  162 (285)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGSC-
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCCC-
Confidence            76       68999999997543221   1   1378889999999999988765   245699999997532211011 


Q ss_pred             CCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCc-eeCCCCCCCCccccccccccCC
Q 043792          160 NPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGL-VMGPDVTISNPYLKGAAEMYED  235 (294)
Q Consensus       160 ~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~-i~G~~~~~~~~~~~~~~~~~~~  235 (294)
                         .                  ..|+.+|.+.+.+.+.++.+   +|+++++++||. +-.+.   .........     
T Consensus       163 ---~------------------~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~---~~~~~~~~~-----  213 (285)
T 3sc4_A          163 ---P------------------TPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAA---VQNLLGGDE-----  213 (285)
T ss_dssp             ---S------------------HHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHH---HHHHHTSCC-----
T ss_pred             ---C------------------chHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHH---HHhhccccc-----
Confidence               1                  67999999999999999877   589999999995 42221   000111110     


Q ss_pred             CccccccHHHHHHHHHhhhcCcC-CCCeEEeec
Q 043792          236 GVMASVDLRFYVDAHICVFEDVS-SYGRYLCFN  267 (294)
Q Consensus       236 ~~~~~v~v~D~a~~i~~~~~~~~-~~~~~~~~~  267 (294)
                      ....+..++|+|++++.++..+. .+|+.+..+
T Consensus       214 ~~~r~~~pedvA~~~~~l~s~~~~~tG~~i~~d  246 (285)
T 3sc4_A          214 AMARSRKPEVYADAAYVVLNKPSSYTGNTLLCE  246 (285)
T ss_dssp             CCTTCBCTHHHHHHHHHHHTSCTTCCSCEEEHH
T ss_pred             cccCCCCHHHHHHHHHHHhCCcccccceEEEEc
Confidence            11127789999999999997664 456655444

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.92  E-value=4e-24  Score=178.45  Aligned_cols=216  Identities=17%  Similarity=0.100  Sum_probs=152.2

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++|+++||||+|+||+++++.|+++|++|++++|+.+..+.+..++  .....++.++.+|++|++++.++++      
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (262)
T 1zem_A            5 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASV--REKGVEARSYVCDVTSEEAVIGTVDSVVRDF   82 (262)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--HTTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            45689999999999999999999999999999999876655554432  2224578899999999998877765      


Q ss_pred             -cCCEEEecCCCC-CCCC----c--chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPP-SDHS----T--YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 -~~d~Vih~a~~~-~~~~----~--~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                       ++|+|||||+.. ....    .  ..+..+++|+.++.++++++.+.   .+.+++|++||..+.. +...    .   
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-~~~~----~---  154 (262)
T 1zem_A           83 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVK-GPPN----M---  154 (262)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHS-CCTT----B---
T ss_pred             CCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc-CCCC----C---
Confidence             689999999865 2111    1  12378999999999999887653   2457999999976332 1111    1   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCC---------Ccccc--cc-c-
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTIS---------NPYLK--GA-A-  230 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~---------~~~~~--~~-~-  230 (294)
                                     ..|+.+|.+.+.+.+.++.+   +|+++++++||.+..+.....         .....  .. . 
T Consensus       155 ---------------~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (262)
T 1zem_A          155 ---------------AAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVA  219 (262)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHH
T ss_pred             ---------------chHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHH
Confidence                           67999999999998888765   489999999999876541100         00000  00 0 


Q ss_pred             c-cc-CCCccccccHHHHHHHHHhhhcCc--CCCCeEE
Q 043792          231 E-MY-EDGVMASVDLRFYVDAHICVFEDV--SSYGRYL  264 (294)
Q Consensus       231 ~-~~-~~~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~  264 (294)
                      . .. ......+..++|+|++++.++...  ..+|+.+
T Consensus       220 ~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i  257 (262)
T 1zem_A          220 QQMIGSVPMRRYGDINEIPGVVAFLLGDDSSFMTGVNL  257 (262)
T ss_dssp             HHHHHTSTTSSCBCGGGSHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcCCcEE
Confidence            0 00 001112788999999999998653  2356544

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.91  E-value=4.5e-24  Score=173.88  Aligned_cols=197  Identities=14%  Similarity=0.073  Sum_probs=145.4

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc---cC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK---GC   99 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---~~   99 (294)
                      ..+++++|||||+|+||+++++.|+++|++|++++|+.+                      +|++|+++++++++   ++
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~----------------------~D~~~~~~v~~~~~~~g~i   60 (223)
T 3uce_A            3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG----------------------LDISDEKSVYHYFETIGAF   60 (223)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT----------------------CCTTCHHHHHHHHHHHCSE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc----------------------cCCCCHHHHHHHHHHhCCC
Confidence            445789999999999999999999999999999988741                      69999999988876   58


Q ss_pred             CEEEecCCCCCCC-----Cc--chhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCC
Q 043792          100 SGLFYSFEPPSDH-----ST--YDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNW  171 (294)
Q Consensus       100 d~Vih~a~~~~~~-----~~--~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~  171 (294)
                      |++||||+.....     ..  ..++.+++|+.++.++++++.+. ..-.++|++||..+.......             
T Consensus        61 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~-------------  127 (223)
T 3uce_A           61 DHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVANT-------------  127 (223)
T ss_dssp             EEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTTC-------------
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCCc-------------
Confidence            9999999975221     11  12378999999999999998876 112489999998632211111             


Q ss_pred             CChhhhhhccchhHhhHHHHHHHHHHHHHhcC-CeEEEEecCceeCCCCCCCCc-----cccccccccCCCccccccHHH
Q 043792          172 SDVNLCKKFKLWHGLSKTLAEKTAWALAMDRG-ISMVSINGGLVMGPDVTISNP-----YLKGAAEMYEDGVMASVDLRF  245 (294)
Q Consensus       172 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~-~~~~ilrp~~i~G~~~~~~~~-----~~~~~~~~~~~~~~~~v~v~D  245 (294)
                                ..|+.+|.+.+.+.+.++.+.+ +++.+++||.+.++.......     +.+......+  ...+.+++|
T Consensus       128 ----------~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d  195 (223)
T 3uce_A          128 ----------YVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLP--VGKVGEASD  195 (223)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHST--TCSCBCHHH
T ss_pred             ----------hHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCC--CCCccCHHH
Confidence                      6899999999999999998875 999999999998775321110     0000000111  122789999


Q ss_pred             HHHHHHhhhcCcCCCCeEEee
Q 043792          246 YVDAHICVFEDVSSYGRYLCF  266 (294)
Q Consensus       246 ~a~~i~~~~~~~~~~~~~~~~  266 (294)
                      +|++++.++.....+|+.+..
T Consensus       196 vA~~~~~l~~~~~~tG~~i~v  216 (223)
T 3uce_A          196 IAMAYLFAIQNSYMTGTVIDV  216 (223)
T ss_dssp             HHHHHHHHHHCTTCCSCEEEE
T ss_pred             HHHHHHHHccCCCCCCcEEEe
Confidence            999999999876667775433

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.91  E-value=3.8e-23  Score=168.35  Aligned_cols=213  Identities=14%  Similarity=0.030  Sum_probs=154.0

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc---cCC
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK---GCS  100 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---~~d  100 (294)
                      +.+|++|||||++.||+.+++.|+++|++|++++|+.+..+.        ....++..+.+|++|+++++++++   ++|
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~--------~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iD   80 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA--------PRHPRIRREELDITDSQRLQRLFEALPRLD   80 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS--------CCCTTEEEEECCTTCHHHHHHHHHHCSCCS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh--------hhcCCeEEEEecCCCHHHHHHHHHhcCCCC
Confidence            568999999999999999999999999999999998765432        223578999999999999988876   579


Q ss_pred             EEEecCCCCCCCCcc----hhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCCh
Q 043792          101 GLFYSFEPPSDHSTY----DELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDV  174 (294)
Q Consensus       101 ~Vih~a~~~~~~~~~----~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~  174 (294)
                      ++|||||........    .++.+++|+.++..+.+++...  ++-.++|++||..+.......                
T Consensus        81 iLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~----------------  144 (242)
T 4b79_A           81 VLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSADR----------------  144 (242)
T ss_dssp             EEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCSSC----------------
T ss_pred             EEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCCCC----------------
Confidence            999999975432221    1388999999999888876543  122689999998643221111                


Q ss_pred             hhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc---cccccccccCCCccccccHHHHHH
Q 043792          175 NLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP---YLKGAAEMYEDGVMASVDLRFYVD  248 (294)
Q Consensus       175 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~---~~~~~~~~~~~~~~~~v~v~D~a~  248 (294)
                             ..|+.||.....+.+.++.+   +|+++.+|.||.|..|.......   ..+......+-++  +-..+|+|.
T Consensus       145 -------~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR--~g~peeiA~  215 (242)
T 4b79_A          145 -------PAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLAR--WGEAPEVAS  215 (242)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCS--CBCHHHHHH
T ss_pred             -------HHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCC--CcCHHHHHH
Confidence                   68999999999999988876   48999999999998775221110   0000001112222  778999999


Q ss_pred             HHHhhhcCcC--CCCeEEeeccc
Q 043792          249 AHICVFEDVS--SYGRYLCFNHV  269 (294)
Q Consensus       249 ~i~~~~~~~~--~~~~~~~~~~~  269 (294)
                      +++.++....  .+|+.+..++.
T Consensus       216 ~v~fLaSd~a~~iTG~~l~VDGG  238 (242)
T 4b79_A          216 AAAFLCGPGASFVTGAVLAVDGG  238 (242)
T ss_dssp             HHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHhCchhcCccCceEEECcc
Confidence            9999986543  36765554443

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.91  E-value=1.2e-22  Score=168.01  Aligned_cols=223  Identities=13%  Similarity=0.032  Sum_probs=159.3

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++|++|||||++.||+.+++.|+++|.+|++++|+.+..+.+..   ......++.++.+|++|+++++++++     
T Consensus         4 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~---~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~   80 (258)
T 4gkb_A            4 NLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDA---LAQRQPRATYLPVELQDDAQCRDAVAQTIAT   80 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHH---HHHHCTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHH---HHhcCCCEEEEEeecCCHHHHHHHHHHHHHH
Confidence            5678999999999999999999999999999999998877554443   33345688999999999988877765     


Q ss_pred             --cCCEEEecCCCCCCCCc--c---hhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHST--Y---DELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~~--~---~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                        ++|++|||||.......  .   .++.+++|+.++.++.+++.+.  .+-.++|++||..+.......          
T Consensus        81 ~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~----------  150 (258)
T 4gkb_A           81 FGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQGNT----------  150 (258)
T ss_dssp             HSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCSSC----------
T ss_pred             hCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCCCc----------
Confidence              57999999987443211  1   1378999999999988876544  122689999998754322222          


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccc----cccCCCc--cc
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAA----EMYEDGV--MA  239 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~----~~~~~~~--~~  239 (294)
                                   ..|+.+|.+...+.+.++.+   +|+++.+|.||.|..+.............    .......  ..
T Consensus       151 -------------~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R  217 (258)
T 4gkb_A          151 -------------SGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRR  217 (258)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTS
T ss_pred             -------------hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCC
Confidence                         78999999999999998876   48999999999998775321110000000    1111111  12


Q ss_pred             cccHHHHHHHHHhhhcCcC--CCCeEEeeccccc
Q 043792          240 SVDLRFYVDAHICVFEDVS--SYGRYLCFNHVIN  271 (294)
Q Consensus       240 ~v~v~D~a~~i~~~~~~~~--~~~~~~~~~~~~s  271 (294)
                      +...+|+|.+++.++....  .+|+.+..++.+|
T Consensus       218 ~g~peeiA~~v~fLaS~~a~~iTG~~i~VDGG~T  251 (258)
T 4gkb_A          218 FTTPDEIADTAVFLLSPRASHTTGEWLFVDGGYT  251 (258)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CcCHHHHHHHHHHHhCchhcCccCCeEEECCCcc
Confidence            7789999999999986543  4677665555443

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.91  E-value=1.1e-23  Score=174.03  Aligned_cols=209  Identities=19%  Similarity=0.136  Sum_probs=150.4

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHH-CCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----c
Q 043792           25 ATKTVCVMDASGHFASALVRRLLL-RGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----G   98 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----~   98 (294)
                      ++|++|||||+|+||+++++.|++ .|++|++++|+.+.            ....+.++.+|++|.+++.++++     +
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~------------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   70 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF------------SAENLKFIKADLTKQQDITNVLDIIKNVS   70 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC------------CCTTEEEEECCTTCHHHHHHHHHHTTTCC
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc------------ccccceEEecCcCCHHHHHHHHHHHHhCC
Confidence            468999999999999999999999 78999999887642            12367899999999999988886     6


Q ss_pred             CCEEEecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCC
Q 043792           99 CSGLFYSFEPPSDHS----T--YDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNW  171 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~  171 (294)
                      +|++||||+......    .  ..++.+++|+.++.++++++... ..-.++|++||..++.....     .        
T Consensus        71 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-----~--------  137 (244)
T 4e4y_A           71 FDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPN-----S--------  137 (244)
T ss_dssp             EEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTT-----B--------
T ss_pred             CCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCC-----C--------
Confidence            799999999754321    1  12378999999999999998766 11148999999863321111     1        


Q ss_pred             CChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-cc--cc-----cc-ccc-CCCcc
Q 043792          172 SDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YL--KG-----AA-EMY-EDGVM  238 (294)
Q Consensus       172 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~--~~-----~~-~~~-~~~~~  238 (294)
                                ..|+.+|.+.+.+.+.++.+   +|+++++++||.+.++....... ..  .+     .. ... .....
T Consensus       138 ----------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  207 (244)
T 4e4y_A          138 ----------FAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLN  207 (244)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTS
T ss_pred             ----------chhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCC
Confidence                      67999999999999998874   58999999999998764210000 00  00     00 000 01112


Q ss_pred             ccccHHHHHHHHHhhhcCcC--CCCeEEeecc
Q 043792          239 ASVDLRFYVDAHICVFEDVS--SYGRYLCFNH  268 (294)
Q Consensus       239 ~~v~v~D~a~~i~~~~~~~~--~~~~~~~~~~  268 (294)
                      .+.+++|+|++++.++....  .+|+.+..++
T Consensus       208 r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdG  239 (244)
T 4e4y_A          208 RIAQPQEIAELVIFLLSDKSKFMTGGLIPIDG  239 (244)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCcCHHHHHHHHHHHhcCccccccCCeEeECC
Confidence            28899999999999997543  3566544443

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.91  E-value=6.5e-23  Score=169.58  Aligned_cols=208  Identities=13%  Similarity=0.032  Sum_probs=150.8

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCC--CChhHHHHHhc---
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADP--FDYHSLVNALK---   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl--~~~~~~~~~~~---   97 (294)
                      ..++++|+||||+|+||+++++.|+++|++|++++|+.++.+.+.+++.. ....++.++.+|+  +|.+++.++++   
T Consensus        11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~d~d~~~~~~~~~~~~~~~   89 (247)
T 3i1j_A           11 LLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKS-AGQPQPLIIALNLENATAQQYRELAARVE   89 (247)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-TTSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHh-cCCCCceEEEeccccCCHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999997766665553321 2234677888877  88888777764   


Q ss_pred             ----cCCEEEecCCCCCCCC-------cchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCC
Q 043792           98 ----GCSGLFYSFEPPSDHS-------TYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTS  163 (294)
Q Consensus        98 ----~~d~Vih~a~~~~~~~-------~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~  163 (294)
                          ++|++||||+......       ...++.+++|+.++.++++++.+.   .+..++|++||..+.......     
T Consensus        90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-----  164 (247)
T 3i1j_A           90 HEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANW-----  164 (247)
T ss_dssp             HHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTC-----
T ss_pred             HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCc-----
Confidence                6899999999753221       112378999999999999988432   255799999997632211111     


Q ss_pred             CCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh----cCCeEEEEecCceeCCCCCCCCccccccccccCCCccc
Q 043792          164 HDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD----RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMA  239 (294)
Q Consensus       164 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~  239 (294)
                                        ..|+.+|.+.+.+.+.++.+    .++++.+++||.+..+..   ......      .....
T Consensus       165 ------------------~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~---~~~~~~------~~~~~  217 (247)
T 3i1j_A          165 ------------------GAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMR---AQAYPD------ENPLN  217 (247)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHH---HHHSTT------SCGGG
T ss_pred             ------------------chhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccc---hhcccc------cCccC
Confidence                              68999999999999998876    479999999999855431   100010      11123


Q ss_pred             cccHHHHHHHHHhhhcCc--CCCCeE
Q 043792          240 SVDLRFYVDAHICVFEDV--SSYGRY  263 (294)
Q Consensus       240 ~v~v~D~a~~i~~~~~~~--~~~~~~  263 (294)
                      +...+|+|++++.++...  ..+|+.
T Consensus       218 ~~~p~dva~~~~~l~s~~~~~itG~~  243 (247)
T 3i1j_A          218 NPAPEDIMPVYLYLMGPDSTGINGQA  243 (247)
T ss_dssp             SCCGGGGTHHHHHHHSGGGTTCCSCE
T ss_pred             CCCHHHHHHHHHHHhCchhccccCee
Confidence            677899999999998654  234554

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.91  E-value=3.1e-23  Score=173.77  Aligned_cols=200  Identities=15%  Similarity=0.156  Sum_probs=143.9

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc-------C
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG-------C   99 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-------~   99 (294)
                      +++|||||+|+||+++++.|+++|++|++++|+.+..+.+.+++  . ...++.++.+|++|.+++.++++.       +
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~--~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   98 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGEL--S-AKTRVLPLTLDVRDRAAMSAAVDNLPEEFATL   98 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--T-TTSCEEEEECCTTCHHHHHHHHHTCCGGGSSC
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--h-cCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            78999999999999999999999999999999876655554432  1 114788999999999999988864       5


Q ss_pred             CEEEecCCCCCC-CC------cchhhhHhHhhHHHHHHHHHHH----hcCCCc-EEEEecCcceeeeCCCCCCCCCCCCC
Q 043792          100 SGLFYSFEPPSD-HS------TYDELTAEVETMAAHNVLEACA----QTNTVD-KVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus       100 d~Vih~a~~~~~-~~------~~~~~~~~~n~~~~~~ll~~~~----~~~~~~-~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                      |++|||||.... ..      ...+..+++|+.++.++++++.    +. +.. ++|++||..+..... .    .    
T Consensus        99 D~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-~~g~~IV~isS~~~~~~~~-~----~----  168 (272)
T 2nwq_A           99 RGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAH-GAGASIVNLGSVAGKWPYP-G----S----  168 (272)
T ss_dssp             CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CTTCEEEEECCGGGTSCCT-T----C----
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEeCCchhccCCC-C----C----
Confidence            999999987542 11      1123789999999888877765    34 556 999999986322111 1    1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccc----cccCCCcccc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAA----EMYEDGVMAS  240 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~----~~~~~~~~~~  240 (294)
                                    ..|+.+|.+.+.+.+.++.+   .|+++++++||.+.++.....   ..+..    ....  ...+
T Consensus       169 --------------~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~---~~~~~~~~~~~~~--~~~~  229 (272)
T 2nwq_A          169 --------------HVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVR---FGGDQARYDKTYA--GAHP  229 (272)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC-------------------------CCCC
T ss_pred             --------------chHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcc---cccchHHHHHhhc--cCCC
Confidence                          67999999999999998866   479999999999987752210   01010    0111  1125


Q ss_pred             ccHHHHHHHHHhhhcCcC
Q 043792          241 VDLRFYVDAHICVFEDVS  258 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~~  258 (294)
                      +..+|+|++++.++..+.
T Consensus       230 ~~pedvA~~v~~l~s~~~  247 (272)
T 2nwq_A          230 IQPEDIAETIFWIMNQPA  247 (272)
T ss_dssp             BCHHHHHHHHHHHHTSCT
T ss_pred             CCHHHHHHHHHHHhCCCc
Confidence            789999999999997643

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.91  E-value=4.8e-23  Score=170.58  Aligned_cols=209  Identities=12%  Similarity=0.049  Sum_probs=143.6

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCC-ChhHHHHHhccCCE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPF-DYHSLVNALKGCSG  101 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~-~~~~~~~~~~~~d~  101 (294)
                      ..++++||||||+|+||+++++.|+++|++|++++|+.   +.+.+   .    ..+.++ +|+. +.+.+.+.+.++|+
T Consensus        16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~---~~~~~---~----~~~~~~-~D~~~~~~~~~~~~~~iD~   84 (249)
T 1o5i_A           16 GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE---ELLKR---S----GHRYVV-CDLRKDLDLLFEKVKEVDI   84 (249)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH---HHHHH---T----CSEEEE-CCTTTCHHHHHHHSCCCSE
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH---HHHHh---h----CCeEEE-eeHHHHHHHHHHHhcCCCE
Confidence            45679999999999999999999999999999999986   22222   2    256677 9992 22333333447899


Q ss_pred             EEecCCCCCCCC------cchhhhHhHhhHHHHHHHHHH----HhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCC
Q 043792          102 LFYSFEPPSDHS------TYDELTAEVETMAAHNVLEAC----AQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNW  171 (294)
Q Consensus       102 Vih~a~~~~~~~------~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~  171 (294)
                      |||||+......      ...+..+++|+.++.++.+++    ++. +.++||++||..++.... .    .        
T Consensus        85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~-~----~--------  150 (249)
T 1o5i_A           85 LVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-GWGRIVAITSFSVISPIE-N----L--------  150 (249)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCT-T----B--------
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEcchHhcCCCC-C----C--------
Confidence            999998754321      112378899999987776554    445 668999999986322111 0    1        


Q ss_pred             CChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-ccc-ccccccCCCccccccHHHH
Q 043792          172 SDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YLK-GAAEMYEDGVMASVDLRFY  246 (294)
Q Consensus       172 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~~-~~~~~~~~~~~~~v~v~D~  246 (294)
                                ..|+.+|.+.+.+.+.++.+   +|++++++|||.++++....... ... ......  ....+.+++|+
T Consensus       151 ----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--p~~~~~~~~dv  218 (249)
T 1o5i_A          151 ----------YTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQI--PMRRMAKPEEI  218 (249)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTS--TTSSCBCHHHH
T ss_pred             ----------chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccchhhHHHHHHhcC--CCCCCcCHHHH
Confidence                      67999999999999988876   58999999999999886211000 000 000001  11238899999


Q ss_pred             HHHHHhhhcCcC--CCCe-EEeecc
Q 043792          247 VDAHICVFEDVS--SYGR-YLCFNH  268 (294)
Q Consensus       247 a~~i~~~~~~~~--~~~~-~~~~~~  268 (294)
                      |++++.++....  ..|+ +.+.++
T Consensus       219 A~~i~~l~s~~~~~~tG~~~~vdgG  243 (249)
T 1o5i_A          219 ASVVAFLCSEKASYLTGQTIVVDGG  243 (249)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHcCccccCCCCCEEEECCC
Confidence            999999887543  3466 445444

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.91  E-value=1.4e-22  Score=170.09  Aligned_cols=213  Identities=16%  Similarity=0.089  Sum_probs=151.5

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCCh-------hhHHHHHhhccCCCCeEEEECCCCChhHHHHH
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKL-------QCIEEELINYNEEKKLKVFQADPFDYHSLVNA   95 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~   95 (294)
                      ..++|+++||||+|+||+++++.|+++|++|++++|+.++.       +.+..+  ......++.++.+|++|.+++.++
T Consensus         3 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dv~~~~~v~~~   80 (274)
T 3e03_A            3 TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAA--VNAAGGQGLALKCDIREEDQVRAA   80 (274)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHH--HHHHTSEEEEEECCTTCHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHH--HHhcCCeEEEEeCCCCCHHHHHHH
Confidence            45678999999999999999999999999999999987542       222221  112345788999999999988877


Q ss_pred             hc-------cCCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCC
Q 043792           96 LK-------GCSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRD  159 (294)
Q Consensus        96 ~~-------~~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~  159 (294)
                      ++       ++|++|||||........      .++.+++|+.++.++++++...   .+..++|++||..+.....   
T Consensus        81 ~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~---  157 (274)
T 3e03_A           81 VAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAW---  157 (274)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHH---
T ss_pred             HHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC---
Confidence            75       589999999975433211      1378899999999999987543   2457999999975322100   


Q ss_pred             CCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccccccCCC
Q 043792          160 NPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAAEMYEDG  236 (294)
Q Consensus       160 ~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~  236 (294)
                                        ......|+.||.+.+.+.+.++.+.   |+++.+++||.+......  . ...+.      .
T Consensus       158 ------------------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~--~-~~~~~------~  210 (274)
T 3e03_A          158 ------------------WGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAI--N-MLPGV------D  210 (274)
T ss_dssp             ------------------HHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC----------CC------C
T ss_pred             ------------------CCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchh--h-hcccc------c
Confidence                              0011679999999999999988764   799999999954322211  1 11111      1


Q ss_pred             ccccccHHHHHHHHHhhhcCcC--CCCeEEeec
Q 043792          237 VMASVDLRFYVDAHICVFEDVS--SYGRYLCFN  267 (294)
Q Consensus       237 ~~~~v~v~D~a~~i~~~~~~~~--~~~~~~~~~  267 (294)
                      ...+..++|+|++++.++....  .+|++++.+
T Consensus       211 ~~~~~~pedvA~~v~~l~s~~~~~itG~~i~~~  243 (274)
T 3e03_A          211 AAACRRPEIMADAAHAVLTREAAGFHGQFLIDD  243 (274)
T ss_dssp             GGGSBCTHHHHHHHHHHHTSCCTTCCSCEEEHH
T ss_pred             ccccCCHHHHHHHHHHHhCccccccCCeEEEcC
Confidence            1227789999999999997543  357766544

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.91  E-value=5.6e-23  Score=170.74  Aligned_cols=215  Identities=13%  Similarity=0.035  Sum_probs=153.0

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEe-cCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc----
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAAL-HNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG----   98 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~----   98 (294)
                      .++++|+||||+|+||+++++.|+++|++|+++. |+.+..+....+  ......++.++.+|++|.+++..+++.    
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYE--IQSNGGSAFSIGANLESLHGVEALYSSLDNE   82 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHH--HHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHH--HHhcCCceEEEecCcCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999874 444444444332  223345788999999999888777642    


Q ss_pred             ---------CCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCC
Q 043792           99 ---------CSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPT  162 (294)
Q Consensus        99 ---------~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~  162 (294)
                               +|++||||+........      .+..+++|+.++.++++++... .+..++|++||..+..... .    
T Consensus        83 ~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~-~----  157 (255)
T 3icc_A           83 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLP-D----  157 (255)
T ss_dssp             HHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCT-T----
T ss_pred             hcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCC-C----
Confidence                     89999999975432211      1377899999999999998765 2235899999986322111 1    


Q ss_pred             CCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccc--cc--cCC
Q 043792          163 SHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAA--EM--YED  235 (294)
Q Consensus       163 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~--~~--~~~  235 (294)
                      .                  ..|+.+|.+.+.+.+.++.+.   ++++.+++||.+..+....   ......  ..  ...
T Consensus       158 ~------------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---~~~~~~~~~~~~~~~  216 (255)
T 3icc_A          158 F------------------IAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAE---LLSDPMMKQYATTIS  216 (255)
T ss_dssp             B------------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTT---TTTSHHHHHHHHHTS
T ss_pred             c------------------chhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhh---hcccHHHHHhhhccC
Confidence            1                  679999999999999988774   8999999999998776322   111110  00  011


Q ss_pred             CccccccHHHHHHHHHhhhcCc--CCCCeEEee
Q 043792          236 GVMASVDLRFYVDAHICVFEDV--SSYGRYLCF  266 (294)
Q Consensus       236 ~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~  266 (294)
                      ....+.+++|+|++++.++...  ..+|+.+..
T Consensus       217 ~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~v  249 (255)
T 3icc_A          217 AFNRLGEVEDIADTAAFLASPDSRWVTGQLIDV  249 (255)
T ss_dssp             TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             CcCCCCCHHHHHHHHHHHhCcccCCccCCEEEe
Confidence            1123788999999999988643  345665433

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.91  E-value=1.6e-23  Score=172.15  Aligned_cols=195  Identities=13%  Similarity=0.094  Sum_probs=143.5

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------   97 (294)
                      ++|+||||||+|+||+++++.|+++|++|++++|+.+...            ....++.+|++|.+++.++++       
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~   69 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------------DSNILVDGNKNWTEQEQSILEQTASSLQ   69 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------------SEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc------------cccEEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            3579999999999999999999999999999999875421            145677899999988877765       


Q ss_pred             --cCCEEEecCCCCCCCC-----c--chhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS-----T--YDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~-----~--~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                        ++|+|||||+......     .  ..+..+++|+.++.++++++.+. ....++|++||..++. +...    .    
T Consensus        70 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-~~~~----~----  140 (236)
T 1ooe_A           70 GSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMG-PTPS----M----  140 (236)
T ss_dssp             TCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS-CCTT----B----
T ss_pred             CCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhcc-CCCC----c----
Confidence              6899999999654211     1  12378999999999999998764 1125899999986432 1111    1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc-----CCeEEEEecCceeCCCCCCCCccccccccccCCCcccccc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR-----GISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVD  242 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~  242 (294)
                                    ..|+.+|.+.+.+.+.++.+.     ++++++++||.+.++..   ......      .....++.
T Consensus       141 --------------~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~---~~~~~~------~~~~~~~~  197 (236)
T 1ooe_A          141 --------------IGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMN---RKWMPN------ADHSSWTP  197 (236)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHH---HHHSTT------CCGGGCBC
T ss_pred             --------------HHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcch---hhcCCC------ccccccCC
Confidence                          679999999999999998765     49999999999977641   101110      11123678


Q ss_pred             HHHHHHHHHhhhcCc---CCCCeE
Q 043792          243 LRFYVDAHICVFEDV---SSYGRY  263 (294)
Q Consensus       243 v~D~a~~i~~~~~~~---~~~~~~  263 (294)
                      .+|+|++++.++..+   ..+|++
T Consensus       198 ~~dvA~~i~~~l~s~~~~~~~G~~  221 (236)
T 1ooe_A          198 LSFISEHLLKWTTETSSRPSSGAL  221 (236)
T ss_dssp             HHHHHHHHHHHHHCGGGCCCTTCE
T ss_pred             HHHHHHHHHHHHcCCCcccccccE
Confidence            899999998666332   234654

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.91  E-value=1.8e-23  Score=176.75  Aligned_cols=202  Identities=15%  Similarity=-0.007  Sum_probs=147.5

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++++|+||||+|+||+++++.|+++|++|++++|+.++.+.+.+++.. ....++.++.+|++|.+++.++++      
T Consensus        26 ~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  104 (286)
T 1xu9_A           26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLE-LGAASAHYIAGTMEDMTFAEQFVAQAGKLM  104 (286)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-HTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH-hCCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            4568999999999999999999999999999999987665554442211 112368899999999988887775      


Q ss_pred             -cCCEEEec-CCCCCCCC---cc--hhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYS-FEPPSDHS---TY--DELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        98 -~~d~Vih~-a~~~~~~~---~~--~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                       ++|+|||| ++......   ..  .+..+++|+.++.++++++...  .+.+++|++||.++......     .     
T Consensus       105 g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----~-----  174 (286)
T 1xu9_A          105 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPM-----V-----  174 (286)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTT-----C-----
T ss_pred             CCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCCC-----c-----
Confidence             68999999 56543211   11  1378999999999999887543  12369999999863221111     1     


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc-----CCeEEEEecCceeCCCCCCCCccccccccccCCCccccccH
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR-----GISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDL  243 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v  243 (294)
                                   ..|+.+|.+.+.+.+.++.+.     ++++++++||.+.++..   .....+      .....++++
T Consensus       175 -------------~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~---~~~~~~------~~~~~~~~~  232 (286)
T 1xu9_A          175 -------------AAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETA---MKAVSG------IVHMQAAPK  232 (286)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHH---HHHSCG------GGGGGCBCH
T ss_pred             -------------cHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhH---HHhccc------cccCCCCCH
Confidence                         689999999999998887664     89999999999865531   001111      112337899


Q ss_pred             HHHHHHHHhhhcCcC
Q 043792          244 RFYVDAHICVFEDVS  258 (294)
Q Consensus       244 ~D~a~~i~~~~~~~~  258 (294)
                      +|+|+.++.++..+.
T Consensus       233 ~~vA~~i~~~~~~~~  247 (286)
T 1xu9_A          233 EECALEIIKGGALRQ  247 (286)
T ss_dssp             HHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHhcCC
Confidence            999999999987653

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.91  E-value=1.6e-23  Score=174.75  Aligned_cols=219  Identities=9%  Similarity=0.031  Sum_probs=150.8

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCCh---hhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKL---QCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--   97 (294)
                      ..+++++|||||+|+||+++++.|+++|++|++++|.....   +.+..+  ....+.++.++.+|++|.+++.++++  
T Consensus         8 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   85 (262)
T 3ksu_A            8 DLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDE--LEDQGAKVALYQSDLSNEEEVAKLFDFA   85 (262)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHH--HHTTTCEEEEEECCCCSHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHH--HHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            45678999999999999999999999999999998864433   333332  22335578999999999999888876  


Q ss_pred             -----cCCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 -----GCSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 -----~~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                           ++|++|||||........      .+..+++|+.++.++++++... .+..++|++||..+.......       
T Consensus        86 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~-------  158 (262)
T 3ksu_A           86 EKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFY-------  158 (262)
T ss_dssp             HHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCCC-------
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCCC-------
Confidence                 579999999975543211      1378899999999999998765 233689999998643322212       


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccccccCC--Ccccc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAAEMYED--GVMAS  240 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~--~~~~~  240 (294)
                                      ..|+.+|.+.+.+.+.++.+.   ++++.+++||.|..+......  ..........  ....+
T Consensus       159 ----------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~~r~  220 (262)
T 3ksu_A          159 ----------------STYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQE--TKESTAFHKSQAMGNQL  220 (262)
T ss_dssp             ----------------CC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC--------------CCCCS
T ss_pred             ----------------chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC--chHHHHHHHhcCcccCC
Confidence                            679999999999999998875   799999999999655311100  0000011111  11127


Q ss_pred             ccHHHHHHHHHhhhcC-cCCCCeEE-eecc
Q 043792          241 VDLRFYVDAHICVFED-VSSYGRYL-CFNH  268 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~-~~~~~~~~-~~~~  268 (294)
                      .+++|+|++++.++.. ...+|+.+ +.++
T Consensus       221 ~~pedvA~~v~~L~s~~~~itG~~i~vdGg  250 (262)
T 3ksu_A          221 TKIEDIAPIIKFLTTDGWWINGQTIFANGG  250 (262)
T ss_dssp             CCGGGTHHHHHHHHTTTTTCCSCEEEESTT
T ss_pred             CCHHHHHHHHHHHcCCCCCccCCEEEECCC
Confidence            8899999999999875 22357654 4444

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.91  E-value=4.8e-23  Score=169.65  Aligned_cols=217  Identities=13%  Similarity=0.010  Sum_probs=159.3

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      +.++|+++||||++.||+.+++.|+++|++|++.+|+.+..+...+++  ...+.++..+.+|++|+++++++++     
T Consensus         6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l--~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (255)
T 4g81_D            6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTL--TRKGYDAHGVAFDVTDELAIEAAFSKLDAE   83 (255)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHH--HHTTCCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH--HhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            567899999999999999999999999999999999877666555432  2345678899999999998887775     


Q ss_pred             --cCCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc----CCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT----NTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                        ++|++|||||........      .++.+++|+.++..+.+++.+.    ++-.++|++||..+.......       
T Consensus        84 ~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~-------  156 (255)
T 4g81_D           84 GIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTV-------  156 (255)
T ss_dssp             TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTC-------
T ss_pred             CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCc-------
Confidence              479999999975543221      1388999999999988876432    244699999998643322211       


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccc------cccCCC
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAA------EMYEDG  236 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~------~~~~~~  236 (294)
                                      ..|+.+|.+...+.+.++.+   +|+++.+|.||.|..+..   ........      ...+-+
T Consensus       157 ----------------~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~---~~~~~~~~~~~~~~~~~Pl~  217 (255)
T 4g81_D          157 ----------------APYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMN---TALIEDKQFDSWVKSSTPSQ  217 (255)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGG---HHHHTCHHHHHHHHHHSTTC
T ss_pred             ----------------hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchh---hcccCCHHHHHHHHhCCCCC
Confidence                            78999999999999988876   489999999999976642   11111100      111222


Q ss_pred             ccccccHHHHHHHHHhhhcCcC--CCCeEEeeccc
Q 043792          237 VMASVDLRFYVDAHICVFEDVS--SYGRYLCFNHV  269 (294)
Q Consensus       237 ~~~~v~v~D~a~~i~~~~~~~~--~~~~~~~~~~~  269 (294)
                      +  +...+|+|.+++.++....  .+|+.+..++.
T Consensus       218 R--~g~pediA~~v~fL~S~~a~~iTG~~i~VDGG  250 (255)
T 4g81_D          218 R--WGRPEELIGTAIFLSSKASDYINGQIIYVDGG  250 (255)
T ss_dssp             S--CBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             C--CcCHHHHHHHHHHHhCchhCCCcCCEEEECCC
Confidence            2  6778999999999986433  46765544443

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.91  E-value=7.3e-23  Score=172.46  Aligned_cols=218  Identities=14%  Similarity=0.058  Sum_probs=153.6

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++|++|||||+|+||+++++.|+++|++|++++|+.+..+.+..+     ...++.++.+|++|.+++.++++      
T Consensus         3 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   77 (281)
T 3zv4_A            3 LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVA-----HGGNAVGVVGDVRSLQDQKRAAERCLAAF   77 (281)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-----TBTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHH-----cCCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            4578999999999999999999999999999999987665555442     23578999999999998877765      


Q ss_pred             -cCCEEEecCCCCCCCCc-----------chhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHST-----------YDELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDNPTS  163 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~-----------~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~  163 (294)
                       ++|++||||+.......           ..+..+++|+.++.++++++...  .+-.++|++||..+.......     
T Consensus        78 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----  152 (281)
T 3zv4_A           78 GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGGG-----  152 (281)
T ss_dssp             SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSSSC-----
T ss_pred             CCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCCCC-----
Confidence             57999999997542211           01367889999999999987653  112599999998633211111     


Q ss_pred             CCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhcC--CeEEEEecCceeCCCCCCCCc-c----ccccc--ccc-
Q 043792          164 HDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRG--ISMVSINGGLVMGPDVTISNP-Y----LKGAA--EMY-  233 (294)
Q Consensus       164 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~ilrp~~i~G~~~~~~~~-~----~~~~~--~~~-  233 (294)
                                        ..|+.||.+.+.+.+.++.+.+  +++.+++||.+..+....... .    .....  ..+ 
T Consensus       153 ------------------~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  214 (281)
T 3zv4_A          153 ------------------PLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLK  214 (281)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHH
T ss_pred             ------------------chhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHH
Confidence                              6799999999999999987753  999999999998775321110 0    00000  000 


Q ss_pred             -CCCccccccHHHHHHHHHhhhcCcC---CCCeEEeeccc
Q 043792          234 -EDGVMASVDLRFYVDAHICVFEDVS---SYGRYLCFNHV  269 (294)
Q Consensus       234 -~~~~~~~v~v~D~a~~i~~~~~~~~---~~~~~~~~~~~  269 (294)
                       ......+..++|+|++++.++..+.   .+|+.+..++.
T Consensus       215 ~~~p~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG  254 (281)
T 3zv4_A          215 SVLPIGRMPALEEYTGAYVFFATRGDSLPATGALLNYDGG  254 (281)
T ss_dssp             HTCTTSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSS
T ss_pred             hcCCCCCCCCHHHHHHHHHHhhcccccccccCcEEEECCC
Confidence             0111227889999999999987332   46765444433

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.91  E-value=4.5e-23  Score=174.64  Aligned_cols=220  Identities=12%  Similarity=0.044  Sum_probs=154.1

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEe-cCCCChhhHHHHHhhccCCCCeEEEECCCCChh-----------
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAAL-HNHGKLQCIEEELINYNEEKKLKVFQADPFDYH-----------   90 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~-----------   90 (294)
                      ..+++++|||||+|+||+++++.|+++|++|++++ |+.+..+.+.+++.. ....++.++.+|++|.+           
T Consensus         6 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   84 (291)
T 1e7w_A            6 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNA-RRPNSAITVQADLSNVATAPVSGADGSA   84 (291)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-HSTTCEEEEECCCSSSCBCCCC----CC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhh-hcCCeeEEEEeecCCccccccccccccc
Confidence            45678999999999999999999999999999999 887655554443210 22457899999999998           


Q ss_pred             ------HHHHHhc-------cCCEEEecCCCCCCCC----c--------------c--hhhhHhHhhHHHHHHHHHHHhc
Q 043792           91 ------SLVNALK-------GCSGLFYSFEPPSDHS----T--------------Y--DELTAEVETMAAHNVLEACAQT  137 (294)
Q Consensus        91 ------~~~~~~~-------~~d~Vih~a~~~~~~~----~--------------~--~~~~~~~n~~~~~~ll~~~~~~  137 (294)
                            ++.++++       ++|++||||+......    .              .  .+..+++|+.++.++++++.+.
T Consensus        85 ~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  164 (291)
T 1e7w_A           85 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR  164 (291)
T ss_dssp             CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                  8887775       6899999998754221    1              1  1378999999999999987643


Q ss_pred             ---CC------CcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCe
Q 043792          138 ---NT------VDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGIS  205 (294)
Q Consensus       138 ---~~------~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~  205 (294)
                         .+      ..++|++||..+......     .                  ..|+.+|.+.+.+.+.++.+   ++++
T Consensus       165 m~~~~~~~~~~~g~Iv~isS~~~~~~~~~-----~------------------~~Y~asKaa~~~l~~~la~e~~~~gI~  221 (291)
T 1e7w_A          165 VAGTPAKHRGTNYSIINMVDAMTNQPLLG-----Y------------------TIYTMAKGALEGLTRSAALELAPLQIR  221 (291)
T ss_dssp             HHTSCGGGSCSCEEEEEECCTTTTSCCTT-----C------------------HHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             HHhcCCCCCCCCcEEEEEechhhcCCCCC-----C------------------chhHHHHHHHHHHHHHHHHHHHhcCeE
Confidence               13      579999999863221111     1                  68999999999999988876   4899


Q ss_pred             EEEEecCceeCCCCCCCCccccccccccCCCccccccHHHHHHHHHhhhcCc--CCCCeEEeecc
Q 043792          206 MVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDV--SSYGRYLCFNH  268 (294)
Q Consensus       206 ~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~~  268 (294)
                      +++++||.+..+. ..............+-+ ..+..++|+|++++.++...  ..+|+++..++
T Consensus       222 vn~v~PG~v~T~~-~~~~~~~~~~~~~~p~~-~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdG  284 (291)
T 1e7w_A          222 VNGVGPGLSVLVD-DMPPAVWEGHRSKVPLY-QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDG  284 (291)
T ss_dssp             EEEEEESSBCCGG-GSCHHHHHHHHTTCTTT-TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             EEEEeeCCccCCc-cCCHHHHHHHHhhCCCC-CCCCCHHHHHHHHHHHhCCcccCccCcEEEECC
Confidence            9999999997654 11000000000001111 03778999999999998653  33666554433

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.91  E-value=1.8e-22  Score=174.50  Aligned_cols=214  Identities=15%  Similarity=0.035  Sum_probs=153.2

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCCh-------hhHHHHHhhccCCCCeEEEECCCCChhHHHHH
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKL-------QCIEEELINYNEEKKLKVFQADPFDYHSLVNA   95 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~   95 (294)
                      ..++++||||||+|+||+++++.|+++|++|++++|+.++.       ....++  ......++.++.+|++|++++.++
T Consensus        42 ~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~--~~~~g~~~~~~~~Dv~d~~~v~~~  119 (346)
T 3kvo_A           42 RLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEE--IEAVGGKALPCIVDVRDEQQISAA  119 (346)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHH--HHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHH--HHhcCCeEEEEEccCCCHHHHHHH
Confidence            45678999999999999999999999999999999987652       222222  222345788999999999988888


Q ss_pred             hc-------cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCC
Q 043792           96 LK-------GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRD  159 (294)
Q Consensus        96 ~~-------~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~  159 (294)
                      ++       ++|+|||||+.......      ..+.++++|+.++.++++++...   .+..+||++||..++...... 
T Consensus       120 ~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~~-  198 (346)
T 3kvo_A          120 VEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFK-  198 (346)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGTS-
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCCC-
Confidence            76       68999999997543211      11378999999999999998543   255799999997532210000 


Q ss_pred             CCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc--CCeEEEEecCceeCCCCCCCCccccccccccCCCc
Q 043792          160 NPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR--GISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGV  237 (294)
Q Consensus       160 ~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~  237 (294)
                                    .      ...|+.+|.+.+.+.+.++.+.  ++++.++.||.+....      +.+....  ....
T Consensus       199 --------------~------~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~------~~~~~~~--~~~~  250 (346)
T 3kvo_A          199 --------------Q------HCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTA------AMDMLGG--PGIE  250 (346)
T ss_dssp             --------------S------SHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCH------HHHHHCC----CG
T ss_pred             --------------C------chHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccH------HHHhhcc--cccc
Confidence                          0      1689999999999999998874  7999999999643222      1110000  0011


Q ss_pred             cccccHHHHHHHHHhhhcCcC-CCCeEEeec
Q 043792          238 MASVDLRFYVDAHICVFEDVS-SYGRYLCFN  267 (294)
Q Consensus       238 ~~~v~v~D~a~~i~~~~~~~~-~~~~~~~~~  267 (294)
                      ..+..++|+|++++.++.... .+|++++.+
T Consensus       251 ~r~~~pedvA~~v~~L~s~~~~itG~~ivdg  281 (346)
T 3kvo_A          251 SQCRKVDIIADAAYSIFQKPKSFTGNFVIDE  281 (346)
T ss_dssp             GGCBCTHHHHHHHHHHHTSCTTCCSCEEEHH
T ss_pred             ccCCCHHHHHHHHHHHHhcCCCCCceEEECC
Confidence            227789999999999997622 356666433

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.91  E-value=1e-22  Score=175.13  Aligned_cols=214  Identities=15%  Similarity=0.040  Sum_probs=149.7

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhh----ccCCCCeEEEECCCCChhHHHHHhcc---
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELIN----YNEEKKLKVFQADPFDYHSLVNALKG---   98 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~----~~~~~~v~~~~~Dl~~~~~~~~~~~~---   98 (294)
                      +++||||||+|+||+++++.|+++|++|+++.|+....+.+...+..    .....++.++.+|++|.+++.++++.   
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence            57899999999999999999999999999988865544333221101    11235789999999999999999875   


Q ss_pred             --CCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           99 --CSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        99 --~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                        +|++||||+.......      ..++.+++|+.++.++++++.    +. +.++||++||..++.....     .   
T Consensus        82 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-~~g~IV~isS~~~~~~~~~-----~---  152 (327)
T 1jtv_A           82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR-GSGRVLVTGSVGGLMGLPF-----N---  152 (327)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEEGGGTSCCTT-----C---
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEECCcccccCCCC-----C---
Confidence              8999999987543211      123789999999999999863    34 5679999999863321111     1   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCcccccccc-----------c
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAE-----------M  232 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~-----------~  232 (294)
                                     ..|+.||.+.+.+.+.++.+   .|+++++++||.|.++....   .......           .
T Consensus       153 ---------------~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~---~~~~~~~~~~~~~~~~~~~  214 (327)
T 1jtv_A          153 ---------------DVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEK---VLGSPEEVLDRTDIHTFHR  214 (327)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC----------CCHHHHHHTSCHHHHHH
T ss_pred             ---------------hHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhh---hhhcchhhhccCCHHHHHH
Confidence                           67999999999999998875   58999999999998765221   1110000           0


Q ss_pred             cCC-------Cccc-cccHHHHHHHHHhhhcCcCCCCeEEee
Q 043792          233 YED-------GVMA-SVDLRFYVDAHICVFEDVSSYGRYLCF  266 (294)
Q Consensus       233 ~~~-------~~~~-~v~v~D~a~~i~~~~~~~~~~~~~~~~  266 (294)
                      +..       .... .++++|+|++++.++..+.....|+..
T Consensus       215 ~~~~~~~~~~~~~~~~~~pedvA~~i~~l~~~~~~~~~~~tg  256 (327)
T 1jtv_A          215 FYQYLAHSKQVFREAAQNPEEVAEVFLTALRAPKPTLRYFTT  256 (327)
T ss_dssp             HHHHHHHHHHHHHHHCBCHHHHHHHHHHHHHCSSCCSEEESC
T ss_pred             HHHHHHHHHHhhhhcCCCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            000       0001 258999999999999875544455543

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.91  E-value=1e-23  Score=174.27  Aligned_cols=204  Identities=14%  Similarity=0.072  Sum_probs=132.0

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHH---HHHh---c
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSL---VNAL---K   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~---~~~~---~   97 (294)
                      .++++||||||+|+||+++++.|++ |++|++++|+.+..+.+.+       ..++.++.+|+.+....   .+.+   .
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~~~~~   74 (245)
T 3e9n_A            3 LKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-------IEGVEPIESDIVKEVLEEGGVDKLKNLD   74 (245)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-------STTEEEEECCHHHHHHTSSSCGGGTTCS
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-------hcCCcceecccchHHHHHHHHHHHHhcC
Confidence            4578999999999999999999987 9999999998655444332       24689999999887442   1222   2


Q ss_pred             cCCEEEecCCCCCCCCc---c---hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           98 GCSGLFYSFEPPSDHST---Y---DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~~---~---~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                      ++|+|||||+.......   .   .+..+++|+.++.++++++...   .+ .++|++||..++......          
T Consensus        75 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~----------  143 (245)
T 3e9n_A           75 HVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGN----------  143 (245)
T ss_dssp             CCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------C----------
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCc----------
Confidence            68999999997543321   1   1377899999988888876532   13 689999998643211111          


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHH
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRF  245 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  245 (294)
                                   ..|+.+|.+.+.+.+.++.+   .|+++++++||.+.++....   ..........  ...+++++|
T Consensus       144 -------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---~~~~~~~~~~--~~~~~~p~d  205 (245)
T 3e9n_A          144 -------------TIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQG---LMDSQGTNFR--PEIYIEPKE  205 (245)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------C--CGGGSCHHH
T ss_pred             -------------hHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhh---hhhhhhcccc--cccCCCHHH
Confidence                         78999999999999998876   58999999999998876321   1111111111  123889999


Q ss_pred             HHHHHHhhhcCcCCCCeEE
Q 043792          246 YVDAHICVFEDVSSYGRYL  264 (294)
Q Consensus       246 ~a~~i~~~~~~~~~~~~~~  264 (294)
                      +|++++.++..+..+..+.
T Consensus       206 vA~~i~~l~~~~~~~~~~~  224 (245)
T 3e9n_A          206 IANAIRFVIDAGETTQITN  224 (245)
T ss_dssp             HHHHHHHHHTSCTTEEEEE
T ss_pred             HHHHHHHHHcCCCccceee
Confidence            9999999998776544443

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.91  E-value=9.1e-23  Score=170.67  Aligned_cols=221  Identities=16%  Similarity=0.079  Sum_probs=156.2

Q ss_pred             CCCCCeEEEeCCC--chHHHHHHHHHHHCCCeEEEEecCCCCh-hhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--
Q 043792           23 SNATKTVCVMDAS--GHFASALVRRLLLRGYTVHAALHNHGKL-QCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--   97 (294)
Q Consensus        23 ~~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--   97 (294)
                      ..++++|+||||+  |+||+++++.|+++|++|++++|+.... +...+++. .....++.++.+|++|.++++++++  
T Consensus        17 ~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~Dl~~~~~v~~~~~~~   95 (267)
T 3gdg_A           17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELE-KTYGIKAKAYKCQVDSYESCEKLVKDV   95 (267)
T ss_dssp             CCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHH-HHHCCCEECCBCCTTCHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHH-HhcCCceeEEecCCCCHHHHHHHHHHH
Confidence            3567899999999  8999999999999999999999887654 33333221 1224578999999999998888775  


Q ss_pred             -----cCCEEEecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCCCCCC
Q 043792           98 -----GCSGLFYSFEPPSDHS----T--YDELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHRDNPT  162 (294)
Q Consensus        98 -----~~d~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~  162 (294)
                           ++|+|||||+......    .  ..+..+++|+.++.++++++.    +. +..++|++||..+.......    
T Consensus        96 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~----  170 (267)
T 3gdg_A           96 VADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKER-GTGSLVITASMSGHIANFPQ----  170 (267)
T ss_dssp             HHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCCSSS----
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHc-CCceEEEEccccccccCCCC----
Confidence                 4699999998755332    1  123789999999999999874    34 45799999997632211000    


Q ss_pred             CCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhcC--CeEEEEecCceeCCCCCCCCccccccccccCC--Ccc
Q 043792          163 SHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRG--ISMVSINGGLVMGPDVTISNPYLKGAAEMYED--GVM  238 (294)
Q Consensus       163 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~--~~~  238 (294)
                                 ..      ..|+.+|.+.+.+.+.++.+.+  +++.++.||.+..+......   ......+..  ...
T Consensus       171 -----------~~------~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~  230 (267)
T 3gdg_A          171 -----------EQ------TSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVP---KETQQLWHSMIPMG  230 (267)
T ss_dssp             -----------CC------HHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSC---HHHHHHHHTTSTTS
T ss_pred             -----------CC------CcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCC---HHHHHHHHhcCCCC
Confidence                       00      6799999999999999988764  89999999999766521111   100011111  112


Q ss_pred             ccccHHHHHHHHHhhhcCc--CCCCeEEeeccc
Q 043792          239 ASVDLRFYVDAHICVFEDV--SSYGRYLCFNHV  269 (294)
Q Consensus       239 ~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~~~  269 (294)
                      .+.+++|+|++++.++...  ..+|+.+..++.
T Consensus       231 r~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG  263 (267)
T 3gdg_A          231 RDGLAKELKGAYVYFASDASTYTTGADLLIDGG  263 (267)
T ss_dssp             SCEETHHHHHHHHHHHSTTCTTCCSCEEEESTT
T ss_pred             CCcCHHHHHhHhheeecCccccccCCEEEECCc
Confidence            2788999999999998653  345665444443

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.90  E-value=4e-23  Score=170.22  Aligned_cols=197  Identities=10%  Similarity=0.039  Sum_probs=145.0

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++|+||||||+|+||+++++.|+++|++|++++|+.+...            ....++.+|++|++++.++++      
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~v~~~~~~~~~~~   72 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------------SASVIVKMTDSFTEQADQVTAEVGKLL   72 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------------SEEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc------------CCcEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            45689999999999999999999999999999999875421            145678899999988887765      


Q ss_pred             ---cCCEEEecCCCCCCCC----cc---hhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHS----TY---DELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~----~~---~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                         ++|+|||||+......    ..   .++.+++|+.++.++++++.+. ..-.++|++||..++. +...    .   
T Consensus        73 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-~~~~----~---  144 (241)
T 1dhr_A           73 GDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALD-GTPG----M---  144 (241)
T ss_dssp             TTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS-CCTT----B---
T ss_pred             CCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHcc-CCCC----c---
Confidence               6899999999754211    11   1378899999999999998764 1125899999986332 1111    1   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc-----CCeEEEEecCceeCCCCCCCCccccccccccCCCccccc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR-----GISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASV  241 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v  241 (294)
                                     ..|+.+|.+.+.+.+.++.+.     ++++++++||.+..+..   ......      .....++
T Consensus       145 ---------------~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~---~~~~~~------~~~~~~~  200 (241)
T 1dhr_A          145 ---------------IGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMN---RKSMPE------ADFSSWT  200 (241)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHH---HHHSTT------SCGGGSE
T ss_pred             ---------------hHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccc---cccCcc------hhhccCC
Confidence                           679999999999999988753     59999999999865531   101000      1112367


Q ss_pred             cHHHHHHHHHhhhcCcC--CCCeEE
Q 043792          242 DLRFYVDAHICVFEDVS--SYGRYL  264 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~~--~~~~~~  264 (294)
                      ..+|+|++++.++....  ..|+++
T Consensus       201 ~~~~vA~~v~~l~~~~~~~~~G~~~  225 (241)
T 1dhr_A          201 PLEFLVETFHDWITGNKRPNSGSLI  225 (241)
T ss_dssp             EHHHHHHHHHHHHTTTTCCCTTCEE
T ss_pred             CHHHHHHHHHHHhcCCCcCccceEE
Confidence            88999999999986543  346643

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.90  E-value=4.4e-23  Score=171.32  Aligned_cols=214  Identities=14%  Similarity=0.026  Sum_probs=143.3

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHH----hccCCE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNA----LKGCSG  101 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~----~~~~d~  101 (294)
                      ||+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+ +  .....++..+  |..+.+.+.+.    +.++|+
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l--~~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD~   75 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-F--AETYPQLKPM--SEQEPAELIEAVTSAYGQVDV   75 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-H--HHHCTTSEEC--CCCSHHHHHHHHHHHHSCCCE
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-H--HhcCCcEEEE--CHHHHHHHHHHHHHHhCCCCE
Confidence            4789999999999999999999999999999998776655443 1  1112344443  55444333222    236899


Q ss_pred             EEecCCCC-CCCC----c--chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCC
Q 043792          102 LFYSFEPP-SDHS----T--YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNW  171 (294)
Q Consensus       102 Vih~a~~~-~~~~----~--~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~  171 (294)
                      |||||+.. ....    .  ..++.+++|+.++.++++++.+.   .+..++|++||..++.....     .        
T Consensus        76 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----~--------  142 (254)
T 1zmt_A           76 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKE-----L--------  142 (254)
T ss_dssp             EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTT-----C--------
T ss_pred             EEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCC-----c--------
Confidence            99999976 3221    1  11378999999999999887532   14579999999753221111     1        


Q ss_pred             CChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc--ccccccc----cc-CCCccccc
Q 043792          172 SDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP--YLKGAAE----MY-EDGVMASV  241 (294)
Q Consensus       172 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~--~~~~~~~----~~-~~~~~~~v  241 (294)
                                ..|+.+|.+.+.+.+.++.+.   ++++++++||.++|+.......  +......    .. ......+.
T Consensus       143 ----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~~~~~  212 (254)
T 1zmt_A          143 ----------STYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLG  212 (254)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCB
T ss_pred             ----------hHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCCCCCCc
Confidence                      679999999999999988764   8999999999998886432111  1111000    00 00111278


Q ss_pred             cHHHHHHHHHhhhcCcC--CCCeEEeec
Q 043792          242 DLRFYVDAHICVFEDVS--SYGRYLCFN  267 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~~--~~~~~~~~~  267 (294)
                      +++|+|++++.++....  .+|+++..+
T Consensus       213 ~p~dvA~~v~~l~s~~~~~~tG~~~~vd  240 (254)
T 1zmt_A          213 TQKELGELVAFLASGSCDYLTGQVFWLA  240 (254)
T ss_dssp             CHHHHHHHHHHHHTTSCGGGTTCEEEES
T ss_pred             CHHHHHHHHHHHhCcccCCccCCEEEEC
Confidence            99999999999987543  356654433

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.90  E-value=2e-22  Score=172.05  Aligned_cols=213  Identities=13%  Similarity=0.039  Sum_probs=147.6

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCCh-hHHHHHhc----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDY-HSLVNALK----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~-~~~~~~~~----   97 (294)
                      ..++++||||||+|+||+++++.|+++|++|++++|+.++.+...+++. .....++.++.+|++|. +.+..+++    
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~   87 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLK-NSNHENVVFHQLDVTDPIATMSSLADFIKT   87 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH-TTTCCSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH-hcCCCceEEEEccCCCcHHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999999876655554331 12235799999999998 77766654    


Q ss_pred             ---cCCEEEecCCCCCCC------------------------------------CcchhhhHhHhhHHHHHHHHHHHhc-
Q 043792           98 ---GCSGLFYSFEPPSDH------------------------------------STYDELTAEVETMAAHNVLEACAQT-  137 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~------------------------------------~~~~~~~~~~n~~~~~~ll~~~~~~-  137 (294)
                         ++|+||||||.....                                    ....+..+++|+.++.++++++... 
T Consensus        88 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l  167 (311)
T 3o26_A           88 HFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLL  167 (311)
T ss_dssp             HHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             hCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhh
Confidence               689999999976321                                    0111266899999999998887543 


Q ss_pred             --CCCcEEEEecCcceeeeCCCCC-------CC-------------------CCCCCCCCCCCChhhhhhccchhHhhHH
Q 043792          138 --NTVDKVVFTSSLTAVVWNNHRD-------NP-------------------TSHDFDERNWSDVNLCKKFKLWHGLSKT  189 (294)
Q Consensus       138 --~~~~~~v~~Ss~~~~~~~~~~~-------~~-------------------~~~~~~e~~~~~~~~~~~~~~~Y~~sK~  189 (294)
                        .+..++|++||..+........       .+                   ......+..+...      ...|+.||.
T Consensus       168 ~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~Y~~SK~  241 (311)
T 3o26_A          168 QLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSF------GAAYTTSKA  241 (311)
T ss_dssp             TTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSS------CHHHHHHHH
T ss_pred             ccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCccc------chhhHHHHH
Confidence              2557999999986433210000       00                   0000001111111      167999999


Q ss_pred             HHHHHHHHHHHhc-CCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHHHHHHHHhhhcCcC
Q 043792          190 LAEKTAWALAMDR-GISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVS  258 (294)
Q Consensus       190 ~~e~~~~~~~~~~-~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~i~~~~~~~~  258 (294)
                      +.+.+.+.++.+. ++++++++||.|..+..       .+.         .....++.|+.++.++..+.
T Consensus       242 a~~~~~~~la~e~~~i~v~~v~PG~v~T~~~-------~~~---------~~~~~~~~a~~~~~~~~~~~  295 (311)
T 3o26_A          242 CLNAYTRVLANKIPKFQVNCVCPGLVKTEMN-------YGI---------GNYTAEEGAEHVVRIALFPD  295 (311)
T ss_dssp             HHHHHHHHHHHHCTTSEEEEECCCSBCSGGG-------TTC---------CSBCHHHHHHHHHHHHTCCS
T ss_pred             HHHHHHHHHHhhcCCceEEEecCCceecCCc-------CCC---------CCCCHHHHHHHHHHHHhCCC
Confidence            9999999999886 69999999999965541       111         13567899999998876543

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.90  E-value=2.8e-22  Score=166.54  Aligned_cols=216  Identities=16%  Similarity=0.051  Sum_probs=156.1

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++|++|||||++.||+.+++.|+++|++|++++|+.+..+...+++     +.++..+.+|++|+++++++++      
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~-----g~~~~~~~~Dv~~~~~v~~~~~~~~~~~  101 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI-----GGGAVGIQADSANLAELDRLYEKVKAEA  101 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence            46789999999999999999999999999999999877666555432     3578899999999998887765      


Q ss_pred             -cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDER  169 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~  169 (294)
                       ++|++|||||.......      ..++.+++|+.++.++.+++.+. ..-.++|++||..+.......           
T Consensus       102 G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~~-----------  170 (273)
T 4fgs_A          102 GRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAF-----------  170 (273)
T ss_dssp             SCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTTC-----------
T ss_pred             CCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCCc-----------
Confidence             47999999987443221      11388999999999999998766 222589999998643221111           


Q ss_pred             CCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc--------cccccccccCCCcc
Q 043792          170 NWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP--------YLKGAAEMYEDGVM  238 (294)
Q Consensus       170 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~--------~~~~~~~~~~~~~~  238 (294)
                                  ..|+.+|.+...+.+.++.+.   |+++.+|.||.|..+.......        +.+......+-++ 
T Consensus       171 ------------~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR-  237 (273)
T 4fgs_A          171 ------------SVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGR-  237 (273)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSS-
T ss_pred             ------------hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCC-
Confidence                        789999999999999998774   7999999999997765221100        0000001112222 


Q ss_pred             ccccHHHHHHHHHhhhcCcC--CCCeEEeeccc
Q 043792          239 ASVDLRFYVDAHICVFEDVS--SYGRYLCFNHV  269 (294)
Q Consensus       239 ~~v~v~D~a~~i~~~~~~~~--~~~~~~~~~~~  269 (294)
                       +..++|+|.+++.++....  .+|+.+..++.
T Consensus       238 -~g~peeiA~~v~FLaSd~a~~iTG~~i~VDGG  269 (273)
T 4fgs_A          238 -VGRAEEVAAAALFLASDDSSFVTGAELFVDGG  269 (273)
T ss_dssp             -CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -CcCHHHHHHHHHHHhCchhcCccCCeEeECcC
Confidence             6779999999999996543  36776555443

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.90  E-value=3.1e-22  Score=166.76  Aligned_cols=216  Identities=14%  Similarity=0.032  Sum_probs=147.8

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .+++++|||||+|+||+++++.|+++|++|++++|+.+..+.+.+++  .....++.++.+|++|++++.++++      
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEA--QSLGGQCVPVVCDSSQESEVRSLFEQVDREQ   80 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--HHHSSEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HHcCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            34689999999999999999999999999999999876555544432  1123468899999999988877654      


Q ss_pred             --cCCEEEecCC--CC-------CC----CCcchhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCCC
Q 043792           98 --GCSGLFYSFE--PP-------SD----HSTYDELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNHR  158 (294)
Q Consensus        98 --~~d~Vih~a~--~~-------~~----~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~~  158 (294)
                        ++|++||||+  ..       ..    .....+..+++|+.++.++.+++.    +. +..++|++||..+.. +...
T Consensus        81 ~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~-~~~~  158 (260)
T 2qq5_A           81 QGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPA-GQGLIVVISSPGSLQ-YMFN  158 (260)
T ss_dssp             TTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGG-TCCEEEEECCGGGTS-CCSS
T ss_pred             CCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhc-CCcEEEEEcChhhcC-CCCC
Confidence              3699999994  21       11    111223788899999888777654    34 557999999986321 1001


Q ss_pred             CCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCcccccc-ccccC
Q 043792          159 DNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGA-AEMYE  234 (294)
Q Consensus       159 ~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~-~~~~~  234 (294)
                                             ..|+.+|.+.+.+.+.++.+   +|+++++++||.+.++............ .....
T Consensus       159 -----------------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  215 (260)
T 2qq5_A          159 -----------------------VPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLK  215 (260)
T ss_dssp             -----------------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------
T ss_pred             -----------------------CchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHH
Confidence                                   67999999999999998865   4899999999999877532110000000 00000


Q ss_pred             ---CCccccccHHHHHHHHHhhhcCcC---CCCeEEee
Q 043792          235 ---DGVMASVDLRFYVDAHICVFEDVS---SYGRYLCF  266 (294)
Q Consensus       235 ---~~~~~~v~v~D~a~~i~~~~~~~~---~~~~~~~~  266 (294)
                         .....+..++|+|++++.++..+.   .+|+++..
T Consensus       216 ~~~~~~~~~~~pe~va~~v~~l~s~~~~~~itG~~i~~  253 (260)
T 2qq5_A          216 QFKSAFSSAETTELSGKCVVALATDPNILSLSGKVLPS  253 (260)
T ss_dssp             ------CHHHHHHHHHHHHHHHHTCTTGGGGTTCEEEH
T ss_pred             HHHhhhccCCCHHHHHHHHHHHhcCcccccccceeech
Confidence               001125689999999999987653   25665543

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.90  E-value=8.5e-22  Score=163.60  Aligned_cols=224  Identities=16%  Similarity=0.116  Sum_probs=158.5

Q ss_pred             CCCCCCCeEEEeCCCc--hHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-
Q 043792           21 DSSNATKTVCVMDASG--HFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-   97 (294)
Q Consensus        21 ~~~~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-   97 (294)
                      |.+.++|+++||||+|  .||+.+++.|+++|++|++.+|+.+..+.+.+.+. .....++.++.+|++|++++.++++ 
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~-~~~~~~~~~~~~Dv~~~~~v~~~~~~   79 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLE-QLNQPEAHLYQIDVQSDEEVINGFEQ   79 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHG-GGTCSSCEEEECCTTCHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH-hcCCCcEEEEEccCCCHHHHHHHHHH
Confidence            4567889999999887  89999999999999999999999877766665321 1234578899999999998877765 


Q ss_pred             ------cCCEEEecCCCCCCCC-------cch---hhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCC
Q 043792           98 ------GCSGLFYSFEPPSDHS-------TYD---ELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDN  160 (294)
Q Consensus        98 ------~~d~Vih~a~~~~~~~-------~~~---~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~  160 (294)
                            ++|++||||+......       ...   ...+++|+.++..+.+++... ++-.++|++||..+.......  
T Consensus        80 ~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~~~--  157 (256)
T 4fs3_A           80 IGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNY--  157 (256)
T ss_dssp             HHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCTTT--
T ss_pred             HHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcccc--
Confidence                  5799999998643210       111   256788999998888887655 233689999998643211111  


Q ss_pred             CCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc---cccccccccC
Q 043792          161 PTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP---YLKGAAEMYE  234 (294)
Q Consensus       161 ~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~---~~~~~~~~~~  234 (294)
                                           ..|+.+|.+.+.+.+.++.+   +|+++.+|.||.|..+.......   ..+......+
T Consensus       158 ---------------------~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~P  216 (256)
T 4fs3_A          158 ---------------------NVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAP  216 (256)
T ss_dssp             ---------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHST
T ss_pred             ---------------------hhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCC
Confidence                                 78999999999999988876   48999999999997654221110   0000001111


Q ss_pred             CCccccccHHHHHHHHHhhhcCcC--CCCeEEeecccc
Q 043792          235 DGVMASVDLRFYVDAHICVFEDVS--SYGRYLCFNHVI  270 (294)
Q Consensus       235 ~~~~~~v~v~D~a~~i~~~~~~~~--~~~~~~~~~~~~  270 (294)
                      -++  +...+|+|.+++.++....  .+|+.+..++.+
T Consensus       217 l~R--~g~peevA~~v~fL~Sd~a~~iTG~~i~VDGG~  252 (256)
T 4fs3_A          217 LKR--NVDQVEVGKTAAYLLSDLSSGVTGENIHVDSGF  252 (256)
T ss_dssp             TSS--CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCC--CcCHHHHHHHHHHHhCchhcCccCCEEEECcCH
Confidence            122  6779999999999986533  467765555443

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.89  E-value=3.2e-22  Score=166.63  Aligned_cols=215  Identities=15%  Similarity=0.040  Sum_probs=150.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHH---CCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc---
Q 043792           24 NATKTVCVMDASGHFASALVRRLLL---RGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK---   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---   97 (294)
                      .+++++|||||+|+||+++++.|++   +|++|++++|+.+..+.+.+++.......++.++.+|++|++++.++++   
T Consensus         4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (259)
T 1oaa_A            4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR   83 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHH
Confidence            3568999999999999999999999   8999999999876655554432111113468899999999988877764   


Q ss_pred             ------cCC--EEEecCCCCCCC-------Cc--chhhhHhHhhHHHHHHHHHHHhc---C--CCcEEEEecCcceeeeC
Q 043792           98 ------GCS--GLFYSFEPPSDH-------ST--YDELTAEVETMAAHNVLEACAQT---N--TVDKVVFTSSLTAVVWN  155 (294)
Q Consensus        98 ------~~d--~Vih~a~~~~~~-------~~--~~~~~~~~n~~~~~~ll~~~~~~---~--~~~~~v~~Ss~~~~~~~  155 (294)
                            ++|  ++|||||.....       ..  ..+..+++|+.++.++++++...   .  +..++|++||..++...
T Consensus        84 ~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
T 1oaa_A           84 ELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPY  163 (259)
T ss_dssp             HSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCC
T ss_pred             hccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCC
Confidence                  358  999999975321       11  12378999999999999998765   1  23689999998643211


Q ss_pred             CCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc-CCeEEEEecCceeCCCCCCCCcccc--ccc--
Q 043792          156 NHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR-GISMVSINGGLVMGPDVTISNPYLK--GAA--  230 (294)
Q Consensus       156 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~ilrp~~i~G~~~~~~~~~~~--~~~--  230 (294)
                      ...                       ..|+.+|.+.+.+.+.++.+. ++++++++||.+-.+..   .....  ...  
T Consensus       164 ~~~-----------------------~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~---~~~~~~~~~~~~  217 (259)
T 1oaa_A          164 KGW-----------------------GLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQ---QLARETSKDPEL  217 (259)
T ss_dssp             TTC-----------------------HHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHH---HHHHHHCSCHHH
T ss_pred             CCc-----------------------cHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchH---HHHhhccCChhH
Confidence            111                       679999999999999998876 49999999998854431   10100  000  


Q ss_pred             -cccCC--CccccccHHHHHHHHHhhhcCc-CCCCeEE
Q 043792          231 -EMYED--GVMASVDLRFYVDAHICVFEDV-SSYGRYL  264 (294)
Q Consensus       231 -~~~~~--~~~~~v~v~D~a~~i~~~~~~~-~~~~~~~  264 (294)
                       ..+..  ....+.+++|+|++++.++... ..+|+.+
T Consensus       218 ~~~~~~~~p~~~~~~p~dvA~~v~~l~~~~~~itG~~i  255 (259)
T 1oaa_A          218 RSKLQKLKSDGALVDCGTSAQKLLGLLQKDTFQSGAHV  255 (259)
T ss_dssp             HHHHHHHHHTTCSBCHHHHHHHHHHHHHHCCSCTTEEE
T ss_pred             HHHHHHhhhcCCcCCHHHHHHHHHHHHhhccccCCcEE
Confidence             00000  0112789999999999988642 2345543

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.89  E-value=9.3e-22  Score=160.50  Aligned_cols=216  Identities=16%  Similarity=0.047  Sum_probs=156.2

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCS  100 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d  100 (294)
                      +.++|++|||||++.||+.+++.|+++|++|.+.+|+... +....   ......++..+.+|++|+++++++++  ++|
T Consensus         6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~-~~~~~---~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iD   81 (247)
T 4hp8_A            6 SLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPD-ETLDI---IAKDGGNASALLIDFADPLAAKDSFTDAGFD   81 (247)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCH-HHHHH---HHHTTCCEEEEECCTTSTTTTTTSSTTTCCC
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHH-HHHHH---HHHhCCcEEEEEccCCCHHHHHHHHHhCCCC
Confidence            4578999999999999999999999999999999997542 22222   23345678999999999998887775  489


Q ss_pred             EEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc----CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCC
Q 043792          101 GLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT----NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERN  170 (294)
Q Consensus       101 ~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~  170 (294)
                      ++|||||........      .++.+++|+.++..+.+++.+.    +.-.++|++||..+.......            
T Consensus        82 iLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~------------  149 (247)
T 4hp8_A           82 ILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRV------------  149 (247)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSC------------
T ss_pred             EEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCC------------
Confidence            999999975543221      1388999999999998875543    224689999998643321111            


Q ss_pred             CCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccc------cccCCCccccc
Q 043792          171 WSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAA------EMYEDGVMASV  241 (294)
Q Consensus       171 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~------~~~~~~~~~~v  241 (294)
                                 ..|+.||.....+.+.++.+.   |+++.+|.||.|..+...   .+.....      ...+-++  +-
T Consensus       150 -----------~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~---~~~~~~~~~~~~~~~~PlgR--~g  213 (247)
T 4hp8_A          150 -----------PSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTE---ALRADAARNKAILERIPAGR--WG  213 (247)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGH---HHHTSHHHHHHHHTTCTTSS--CB
T ss_pred             -----------hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchh---hcccCHHHHHHHHhCCCCCC--Cc
Confidence                       679999999999999888764   899999999999766421   1111000      1111222  67


Q ss_pred             cHHHHHHHHHhhhcCcC--CCCeEEeecccc
Q 043792          242 DLRFYVDAHICVFEDVS--SYGRYLCFNHVI  270 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~~--~~~~~~~~~~~~  270 (294)
                      ..+|+|.+++.++....  .+|+.+..++.+
T Consensus       214 ~peeiA~~v~fLaSd~a~~iTG~~i~VDGG~  244 (247)
T 4hp8_A          214 HSEDIAGAAVFLSSAAADYVHGAILNVDGGW  244 (247)
T ss_dssp             CTHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             CHHHHHHHHHHHhCchhcCCcCCeEEECccc
Confidence            78999999999986543  367765555444

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.89  E-value=7.3e-22  Score=177.97  Aligned_cols=221  Identities=15%  Similarity=0.118  Sum_probs=157.8

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCe-EEEEecCCCC---hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccC
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYT-VHAALHNHGK---LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGC   99 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~---~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~   99 (294)
                      ..+++||||||+|+||+++++.|+++|++ |++++|+...   .+.+..+  +...+.++.++.+|++|.+++.++++++
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~--l~~~g~~v~~~~~Dv~d~~~v~~~~~~i  301 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAE--LEALGARTTVAACDVTDRESVRELLGGI  301 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHH--HHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHH--HHhcCCEEEEEEeCCCCHHHHHHHHHHH
Confidence            45789999999999999999999999985 8888997642   2333332  2223457899999999999999998765


Q ss_pred             ------CEEEecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792          100 ------SGLFYSFEPPSDHS----T--YDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus       100 ------d~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                            |+|||+|+......    .  ..+..+++|+.++.++.+++... +.++||++||.+++ ++..+    .    
T Consensus       302 ~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~~~~~V~~SS~a~~-~g~~g----~----  371 (486)
T 2fr1_A          302 GDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-DLTAFVLFSSFASA-FGAPG----L----  371 (486)
T ss_dssp             CTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-CCSEEEEEEEHHHH-TCCTT----C----
T ss_pred             HhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC-CCCEEEEEcChHhc-CCCCC----C----
Confidence                  99999999765431    1  12377889999999999999888 78999999998643 33222    2    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHHHH
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYV  247 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a  247 (294)
                                    ..|+.+|...+.+.+.+. ..|+++++++||.+.+++..... .    ...+......+++.+|++
T Consensus       372 --------------~~Yaaaka~l~~la~~~~-~~gi~v~~i~pG~~~~~gm~~~~-~----~~~~~~~g~~~i~~e~~a  431 (486)
T 2fr1_A          372 --------------GGYAPGNAYLDGLAQQRR-SDGLPATAVAWGTWAGSGMAEGP-V----ADRFRRHGVIEMPPETAC  431 (486)
T ss_dssp             --------------TTTHHHHHHHHHHHHHHH-HTTCCCEEEEECCBC-----------------CTTTTEECBCHHHHH
T ss_pred             --------------HHHHHHHHHHHHHHHHHH-hcCCeEEEEECCeeCCCcccchh-H----HHHHHhcCCCCCCHHHHH
Confidence                          679999999998887665 45999999999999876421111 0    111222334589999999


Q ss_pred             HHHHhhhcCcCCCCeEEeecccccHHHHHHHHH
Q 043792          248 DAHICVFEDVSSYGRYLCFNHVINCNEDAMKLA  280 (294)
Q Consensus       248 ~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~  280 (294)
                      +++..++..+..  .+++..  +.|..+...+.
T Consensus       432 ~~l~~~l~~~~~--~~~v~~--~d~~~~~~~~~  460 (486)
T 2fr1_A          432 RALQNALDRAEV--CPIVID--VRWDRFLLAYT  460 (486)
T ss_dssp             HHHHHHHHTTCS--SCEECE--ECHHHHHHHHT
T ss_pred             HHHHHHHhCCCC--eEEEEe--CCHHHHhhhhc
Confidence            999999976542  233322  45666655443

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.88  E-value=8.4e-22  Score=164.98  Aligned_cols=217  Identities=12%  Similarity=0.050  Sum_probs=151.8

Q ss_pred             CCCCCeEEEeCC--CchHHHHHHHHHHHCCCeEEEEecCCCCh-hhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--
Q 043792           23 SNATKTVCVMDA--SGHFASALVRRLLLRGYTVHAALHNHGKL-QCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--   97 (294)
Q Consensus        23 ~~~~~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--   97 (294)
                      ..++|+|+||||  +|+||+++++.|+++|++|++++|+.++. +.+.+     ....++.++.+|++|++++.++++  
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~~Dv~~~~~v~~~~~~~   78 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD-----RLPAKAPLLELDVQNEEHLASLAGRV   78 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHT-----TSSSCCCEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHH-----hcCCCceEEEccCCCHHHHHHHHHHH
Confidence            456789999999  99999999999999999999999986442 33322     123467889999999998888776  


Q ss_pred             --------cCCEEEecCCCCCC-----CC----c--chhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCC
Q 043792           98 --------GCSGLFYSFEPPSD-----HS----T--YDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNH  157 (294)
Q Consensus        98 --------~~d~Vih~a~~~~~-----~~----~--~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~  157 (294)
                              ++|++||||+....     ..    .  ..++.+++|+.++.++++++.+. ..-.++|++||.+.  ++..
T Consensus        79 ~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~--~~~~  156 (269)
T 2h7i_A           79 TEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS--RAMP  156 (269)
T ss_dssp             HHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS--SCCT
T ss_pred             HHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccc--cccC
Confidence                    78999999987541     11    1  11377899999999999998765 11258999998752  2211


Q ss_pred             CCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCC------CCcc---
Q 043792          158 RDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTI------SNPY---  225 (294)
Q Consensus       158 ~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~------~~~~---  225 (294)
                      .    .                  ..|+.+|.+.+.+.+.++.+.   |+++++++||.+..+....      ....   
T Consensus       157 ~----~------------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~  214 (269)
T 2h7i_A          157 A----Y------------------NWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQ  214 (269)
T ss_dssp             T----T------------------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHH
T ss_pred             c----h------------------HHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHH
Confidence            1    1                  679999999999999988764   8999999999996553100      0000   


Q ss_pred             ----ccccccccCCCccccccHHHHHHHHHhhhcCcC--CCCeEEeeccc
Q 043792          226 ----LKGAAEMYEDGVMASVDLRFYVDAHICVFEDVS--SYGRYLCFNHV  269 (294)
Q Consensus       226 ----~~~~~~~~~~~~~~~v~v~D~a~~i~~~~~~~~--~~~~~~~~~~~  269 (294)
                          .+......+-+ ..+..++|+|++++.++....  .+|+.+..++.
T Consensus       215 ~~~~~~~~~~~~p~~-rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  263 (269)
T 2h7i_A          215 IQLLEEGWDQRAPIG-WNMKDATPVAKTVCALLSDWLPATTGDIIYADGG  263 (269)
T ss_dssp             HHHHHHHHHHHCTTC-CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTT
T ss_pred             HHHHHHhhhccCCcc-cCCCCHHHHHHHHHHHhCchhccCcceEEEecCC
Confidence                00000001111 026778999999999997533  36665544433

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.87  E-value=5.4e-22  Score=163.75  Aligned_cols=210  Identities=14%  Similarity=0.055  Sum_probs=139.7

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEE-e--cCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHH-Hhc---c
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAA-L--HNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVN-ALK---G   98 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~--r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~-~~~---~   98 (294)
                      +|+++||||+|+||+++++.|+++|++|+++ +  |+.++.+.+.+++      .+.++.  |..+.+.+.+ +.+   +
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~------~~~~~~--~~~~v~~~~~~~~~~~g~   72 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN------PGTIAL--AEQKPERLVDATLQHGEA   72 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS------TTEEEC--CCCCGGGHHHHHGGGSSC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh------CCCccc--CHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999999999999999 6  8866555544421      133332  5444443332 222   5


Q ss_pred             CCEEEecCCCCCC---CC----c--chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           99 CSGLFYSFEPPSD---HS----T--YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        99 ~d~Vih~a~~~~~---~~----~--~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                      +|+|||||+....   ..    .  ..+..+++|+.++.++++++...   .+..++|++||..+......     .   
T Consensus        73 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~-----~---  144 (244)
T 1zmo_A           73 IDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAY-----N---  144 (244)
T ss_dssp             EEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT-----C---
T ss_pred             CCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCC-----c---
Confidence            7999999986543   11    1  12378999999999999887632   25579999999863221111     1   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCcccccc--ccccC--CCccc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGA--AEMYE--DGVMA  239 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~--~~~~~--~~~~~  239 (294)
                                     ..|+.+|.+.+.+.+.++.+   +++++++++||.+..+.......+....  .....  .....
T Consensus       145 ---------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~r  209 (244)
T 1zmo_A          145 ---------------PLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGR  209 (244)
T ss_dssp             ---------------TTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCTTCS
T ss_pred             ---------------hHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCCCCC
Confidence                           67999999999999998876   4899999999999776520001010000  00000  01112


Q ss_pred             cccHHHHHHHHHhhhcCcC--CCCeEEee
Q 043792          240 SVDLRFYVDAHICVFEDVS--SYGRYLCF  266 (294)
Q Consensus       240 ~v~v~D~a~~i~~~~~~~~--~~~~~~~~  266 (294)
                      +...+|+|++++.++....  .+|+++..
T Consensus       210 ~~~pe~vA~~v~~l~s~~~~~~tG~~i~v  238 (244)
T 1zmo_A          210 LGRPDEMGALITFLASRRAAPIVGQFFAF  238 (244)
T ss_dssp             CBCHHHHHHHHHHHHTTTTGGGTTCEEEE
T ss_pred             CcCHHHHHHHHHHHcCccccCccCCEEEe
Confidence            7889999999999987543  35665443

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.87  E-value=1.5e-20  Score=170.07  Aligned_cols=222  Identities=17%  Similarity=0.121  Sum_probs=158.4

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCC---hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc-
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGK---LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG-   98 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~---~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-   98 (294)
                      ..+++||||||+|+||.++++.|+++|+ +|++++|+...   .+.+..+  +...+.++.++.+|++|.+++.+++++ 
T Consensus       257 ~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~--l~~~g~~v~~~~~Dvtd~~~v~~~~~~~  334 (511)
T 2z5l_A          257 QPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEE--LRGHGCEVVHAACDVAERDALAALVTAY  334 (511)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHH--HHTTTCEEEEEECCSSCHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHH--HHhcCCEEEEEEeCCCCHHHHHHHHhcC
Confidence            4568999999999999999999999998 58888997532   3333332  223345789999999999999999976 


Q ss_pred             -CCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCC
Q 043792           99 -CSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNW  171 (294)
Q Consensus        99 -~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~  171 (294)
                       +|+|||+|+.......      ..+..+++|+.++.++.+++....+.++||++||..+ .++..+    .        
T Consensus       335 ~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~-~~g~~g----~--------  401 (511)
T 2z5l_A          335 PPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTG-TWGNAG----Q--------  401 (511)
T ss_dssp             CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGG-TTCCTT----B--------
T ss_pred             CCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHh-cCCCCC----C--------
Confidence             9999999997654311      1237789999999999998765435679999999863 233222    2        


Q ss_pred             CChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCccccccc-cccCCCccccccHHHHHHHH
Q 043792          172 SDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAA-EMYEDGVMASVDLRFYVDAH  250 (294)
Q Consensus       172 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~~~~~~~-~~~~~~~~~~v~v~D~a~~i  250 (294)
                                ..|+.+|...+.+.+.+. ..|+++++++||.+.+.+.      ..+.. .........+++.+|+++++
T Consensus       402 ----------~~YaaaKa~ld~la~~~~-~~gi~v~sv~pG~~~~tgm------~~~~~~~~~~~~g~~~l~~e~~a~~l  464 (511)
T 2z5l_A          402 ----------GAYAAANAALDALAERRR-AAGLPATSVAWGLWGGGGM------AAGAGEESLSRRGLRAMDPDAAVDAL  464 (511)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHH-TTTCCCEEEEECCBCSTTC------CCCHHHHHHHHHTBCCBCHHHHHHHH
T ss_pred             ----------HHHHHHHHHHHHHHHHHH-HcCCcEEEEECCcccCCcc------cccccHHHHHhcCCCCCCHHHHHHHH
Confidence                      689999999999998764 4599999999998843321      11100 00111123478999999999


Q ss_pred             HhhhcCcCCCCeEEeecccccHHHHHHHHHH
Q 043792          251 ICVFEDVSSYGRYLCFNHVINCNEDAMKLAR  281 (294)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~  281 (294)
                      ..++..+..  .+++.  .+.|..+...+..
T Consensus       465 ~~al~~~~~--~v~v~--~~d~~~~~~~~~~  491 (511)
T 2z5l_A          465 LGAMGRNDV--CVTVV--DVDWERFAPATNA  491 (511)
T ss_dssp             HHHHHHTCS--EEEEC--CBCHHHHHHHHHH
T ss_pred             HHHHhCCCC--EEEEE--eCCHHHHHhhhcc
Confidence            999976432  23333  3456666665543

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.86  E-value=4e-20  Score=165.17  Aligned_cols=215  Identities=12%  Similarity=0.018  Sum_probs=148.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      ..++++|||||+|.||+++++.|+++|++|++++|+... +.+.+.  .  ...++.++.+|++|.+++.++++      
T Consensus       211 l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~--~--~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~  285 (454)
T 3u0b_A          211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRV--A--DKVGGTALTLDVTADDAVDKITAHVTEHH  285 (454)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHH--H--HHHTCEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHH--H--HHcCCeEEEEecCCHHHHHHHHHHHHHHc
Confidence            357899999999999999999999999999999886432 222221  0  01156789999999998887764      


Q ss_pred             --cCCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                        .+|+|||||+........      .+..+++|+.++.++.+++...   .+..+||++||..+.. +...    .   
T Consensus       286 g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~-g~~g----~---  357 (454)
T 3u0b_A          286 GGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIA-GNRG----Q---  357 (454)
T ss_dssp             TTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHH-CCTT----C---
T ss_pred             CCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCC-CCCC----C---
Confidence              389999999986543211      1278999999999999998764   2456999999987433 2222    2   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccH
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDL  243 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v  243 (294)
                                     ..|+.+|...+.+.+.++.+   .|+++++++||.|.++.......... ...........+...
T Consensus       358 ---------------~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~-~~~~~~~~l~r~g~p  421 (454)
T 3u0b_A          358 ---------------TNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATR-EVGRRLNSLFQGGQP  421 (454)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------C-HHHHHSBTTSSCBCH
T ss_pred             ---------------HHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhH-HHHHhhccccCCCCH
Confidence                           78999999998888888765   48999999999998765321110000 000000111125678


Q ss_pred             HHHHHHHHhhhcCc--CCCCeEEeec
Q 043792          244 RFYVDAHICVFEDV--SSYGRYLCFN  267 (294)
Q Consensus       244 ~D~a~~i~~~~~~~--~~~~~~~~~~  267 (294)
                      +|+|++++.++...  ..+|+.+..+
T Consensus       422 edvA~~v~fL~s~~a~~itG~~i~vd  447 (454)
T 3u0b_A          422 VDVAELIAYFASPASNAVTGNTIRVC  447 (454)
T ss_dssp             HHHHHHHHHHHCGGGTTCCSCEEEES
T ss_pred             HHHHHHHHHHhCCccCCCCCcEEEEC
Confidence            99999999998653  3456654433

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.86  E-value=2.9e-20  Score=154.10  Aligned_cols=210  Identities=12%  Similarity=0.006  Sum_probs=147.2

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      +.++|++|||||++.||+.+++.|+++|++|++.+|+....            ..+..++.+|++|+++++.+++     
T Consensus         8 ~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (261)
T 4h15_A            8 NLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG------------LPEELFVEADLTTKEGCAIVAEATRQR   75 (261)
T ss_dssp             CCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT------------SCTTTEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC------------CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999975421            1133478899999998877765     


Q ss_pred             --cCCEEEecCCCCCCCC------cc--hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS------TY--DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSH  164 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~------~~--~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~  164 (294)
                        ++|++|||||......      ..  .++.+++|+.++.++.+++.+.   ++-.++|++||..+.......    . 
T Consensus        76 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~----~-  150 (261)
T 4h15_A           76 LGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPES----T-  150 (261)
T ss_dssp             TSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTT----C-
T ss_pred             cCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCc----c-
Confidence              4799999998643221      11  1378999999999888876543   245789999998643221111    1 


Q ss_pred             CCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-cc--ccc---------
Q 043792          165 DFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YL--KGA---------  229 (294)
Q Consensus       165 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~--~~~---------  229 (294)
                                       ..|+.||.+.+.+.+.++.+   +|+++.+|.||.|..+....... ..  .+.         
T Consensus       151 -----------------~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~  213 (261)
T 4h15_A          151 -----------------TAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKII  213 (261)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred             -----------------HHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHH
Confidence                             67999999999999988876   48999999999996543100000 00  000         


Q ss_pred             ---ccccCCCccccccHHHHHHHHHhhhcCcC--CCCeEE-eecc
Q 043792          230 ---AEMYEDGVMASVDLRFYVDAHICVFEDVS--SYGRYL-CFNH  268 (294)
Q Consensus       230 ---~~~~~~~~~~~v~v~D~a~~i~~~~~~~~--~~~~~~-~~~~  268 (294)
                         ....+-+  .+...+|+|++++.++....  .+|+.+ +.++
T Consensus       214 ~~~~~~~Plg--R~g~peevA~~v~fLaS~~a~~itG~~i~VDGG  256 (261)
T 4h15_A          214 MDGLGGIPLG--RPAKPEEVANLIAFLASDRAASITGAEYTIDGG  256 (261)
T ss_dssp             HHHTTCCTTS--SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHhcCCCCC--CCcCHHHHHHHHHHHhCchhcCccCcEEEECCc
Confidence               0011112  27789999999999985433  367644 4444

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.86  E-value=8.6e-21  Score=162.37  Aligned_cols=199  Identities=13%  Similarity=0.073  Sum_probs=139.1

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEec---------CCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHH
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALH---------NHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVN   94 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r---------~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~   94 (294)
                      ..+|+||||||+|+||+++++.|+++|++|++.++         +.++.+.+.+++..  ...   ...+|+.+.+++.+
T Consensus         7 l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~--~~~---~~~~D~~~~~~~~~   81 (319)
T 1gz6_A            7 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR--RGG---KAVANYDSVEAGEK   81 (319)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH--TTC---EEEEECCCGGGHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHh--hCC---eEEEeCCCHHHHHH
Confidence            45789999999999999999999999999999765         33333333332211  111   23579999887666


Q ss_pred             Hhc-------cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHH----hcCCCcEEEEecCcceeeeCCC
Q 043792           95 ALK-------GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACA----QTNTVDKVVFTSSLTAVVWNNH  157 (294)
Q Consensus        95 ~~~-------~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~----~~~~~~~~v~~Ss~~~~~~~~~  157 (294)
                      +++       ++|++|||||.......      ..+..+++|+.++.++++++.    +. +..+||++||..+. ++..
T Consensus        82 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~grIV~vsS~~~~-~~~~  159 (319)
T 1gz6_A           82 LVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ-NYGRIIMTASASGI-YGNF  159 (319)
T ss_dssp             HHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHH-HCCT
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEECChhhc-cCCC
Confidence            543       58999999997654311      123789999999999988874    34 55799999997532 2221


Q ss_pred             CCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccC
Q 043792          158 RDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYE  234 (294)
Q Consensus       158 ~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~  234 (294)
                      .    .                  ..|+.+|.+.+.+.+.++.+   +|+++++++||.+ .+.   .    ...   .+
T Consensus       160 ~----~------------------~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~---~----~~~---~~  206 (319)
T 1gz6_A          160 G----Q------------------ANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRM---T----ETV---MP  206 (319)
T ss_dssp             T----C------------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STT---T----GGG---SC
T ss_pred             C----C------------------HHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-ccc---c----ccc---CC
Confidence            1    1                  67999999999999998876   4899999999987 322   1    110   01


Q ss_pred             CCccccccHHHHHHHHHhhhcCcC-CCCe
Q 043792          235 DGVMASVDLRFYVDAHICVFEDVS-SYGR  262 (294)
Q Consensus       235 ~~~~~~v~v~D~a~~i~~~~~~~~-~~~~  262 (294)
                      .....+++++|+|.+++.++..+. .+|+
T Consensus       207 ~~~~~~~~p~dvA~~~~~l~s~~~~~tG~  235 (319)
T 1gz6_A          207 EDLVEALKPEYVAPLVLWLCHESCEENGG  235 (319)
T ss_dssp             HHHHHHSCGGGTHHHHHHHTSTTCCCCSC
T ss_pred             hhhhccCCHHHHHHHHHHHhCchhhcCCC
Confidence            111226789999999999886542 2444

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.85  E-value=4.6e-22  Score=170.98  Aligned_cols=172  Identities=14%  Similarity=0.058  Sum_probs=126.3

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCC-------eEEEEecCCC--ChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHh
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGY-------TVHAALHNHG--KLQCIEEELINYNEEKKLKVFQADPFDYHSLVNAL   96 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~--~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~   96 (294)
                      .|||+||||+||||++++..|+++|+       +|+++++...  +......+  +..  ..+.++ +|+.+...+.+++
T Consensus         4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~d--l~~--~~~~~~-~di~~~~~~~~a~   78 (327)
T 1y7t_A            4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVME--LED--CAFPLL-AGLEATDDPKVAF   78 (327)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHH--HHT--TTCTTE-EEEEEESCHHHHT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhh--hhc--cccccc-CCeEeccChHHHh
Confidence            46999999999999999999999986       8999887542  11111111  111  112223 5776666788889


Q ss_pred             ccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCC-Cc-EEEEecCcceeeeCCCCCCCCCCCCC-CCC-CC
Q 043792           97 KGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNT-VD-KVVFTSSLTAVVWNNHRDNPTSHDFD-ERN-WS  172 (294)
Q Consensus        97 ~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~-~~v~~Ss~~~~~~~~~~~~~~~~~~~-e~~-~~  172 (294)
                      +++|+|||+|+........+.+.++.|+.++.++++++++. + .+ +++++|+.....          .++. |.. ..
T Consensus        79 ~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~-~~~~~~vvv~snp~~~~----------~~~~~~~~~~~  147 (327)
T 1y7t_A           79 KDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEV-AKKDVKVLVVGNPANTN----------ALIAYKNAPGL  147 (327)
T ss_dssp             TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-SCTTCEEEECSSSHHHH----------HHHHHHTCTTS
T ss_pred             CCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-cCCCeEEEEeCCchhhh----------HHHHHHHcCCC
Confidence            99999999999876555555689999999999999999988 4 44 788877642100          0111 111 12


Q ss_pred             ChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCC
Q 043792          173 DVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDV  219 (294)
Q Consensus       173 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~  219 (294)
                      .+.      +.|+.+|..+|++...+++.+|++.+++|+++|||++.
T Consensus       148 ~p~------~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~  188 (327)
T 1y7t_A          148 NPR------NFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHS  188 (327)
T ss_dssp             CGG------GEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred             Chh------heeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCC
Confidence            223      67999999999999999988999999999999999985

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.83  E-value=1.8e-19  Score=161.93  Aligned_cols=203  Identities=15%  Similarity=0.087  Sum_probs=148.8

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCC---ChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc--
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHG---KLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG--   98 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~---~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--   98 (294)
                      ++++||||||+|+||.++++.|+++|+ +|++++|+..   ..+.+..+  +...+.++.++.+|++|.+++.++++.  
T Consensus       238 ~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~--l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~  315 (496)
T 3mje_A          238 VHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAE--LEQLGVRVTIAACDAADREALAALLAELP  315 (496)
T ss_dssp             CCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHH--HHHTTCEEEEEECCTTCHHHHHHHHHTCC
T ss_pred             CCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHH--HHhcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence            348999999999999999999999998 7788888632   23344332  223456799999999999999998863  


Q ss_pred             ----CCEEEecCCCC-CCCC---cc---hhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           99 ----CSGLFYSFEPP-SDHS---TY---DELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        99 ----~d~Vih~a~~~-~~~~---~~---~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                          +|+|||+||.. ....   ..   .+..+++|+.++.++.+++... ..++||++||.++.. +..+    .    
T Consensus       316 ~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~-~~~~iV~~SS~a~~~-g~~g----~----  385 (496)
T 3mje_A          316 EDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL-DLDAFVLFSSGAAVW-GSGG----Q----  385 (496)
T ss_dssp             TTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS-CCSEEEEEEEHHHHT-TCTT----C----
T ss_pred             HhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc-CCCEEEEEeChHhcC-CCCC----c----
Confidence                69999999976 3211   11   1378999999999999999888 778999999987433 3222    2    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHHHH
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYV  247 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a  247 (294)
                                    ..|+.+|...+.+.+.+. ..|+++++|+||.+.+.........    ...+.......+..++.+
T Consensus       386 --------------~~YaAaKa~ldala~~~~-~~Gi~v~sV~pG~w~~~gm~~~~~~----~~~l~~~g~~~l~pe~~~  446 (496)
T 3mje_A          386 --------------PGYAAANAYLDALAEHRR-SLGLTASSVAWGTWGEVGMATDPEV----HDRLVRQGVLAMEPEHAL  446 (496)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHH-HTTCCCEEEEECEESSSCC----------CHHHHHTTEEEECHHHHH
T ss_pred             --------------HHHHHHHHHHHHHHHHHH-hcCCeEEEEECCcccCCccccChHH----HHHHHhcCCCCCCHHHHH
Confidence                          789999999999888765 4699999999999876653211100    011111122357889999


Q ss_pred             HHHHhhhcCcC
Q 043792          248 DAHICVFEDVS  258 (294)
Q Consensus       248 ~~i~~~~~~~~  258 (294)
                      +++..++..+.
T Consensus       447 ~~l~~~l~~~~  457 (496)
T 3mje_A          447 GALDQMLENDD  457 (496)
T ss_dssp             HHHHHHHHHTC
T ss_pred             HHHHHHHcCCC
Confidence            99999987654

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.82  E-value=3.4e-19  Score=151.24  Aligned_cols=219  Identities=11%  Similarity=0.028  Sum_probs=138.9

Q ss_pred             CCCCCeEEEeCCC--chHHHHHHHHHHHCCCeEEEEecCC-----------CChhhHHHHHhhccCC--CCeEEEECC--
Q 043792           23 SNATKTVCVMDAS--GHFASALVRRLLLRGYTVHAALHNH-----------GKLQCIEEELINYNEE--KKLKVFQAD--   85 (294)
Q Consensus        23 ~~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~-----------~~~~~l~~~~~~~~~~--~~v~~~~~D--   85 (294)
                      ..++|++|||||+  |+||+++++.|+++|++|++++|++           .+.+.+.+   .....  .....+.+|  
T Consensus         5 ~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~   81 (297)
T 1d7o_A            5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRV---LPDGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGB---CTTSSBCCEEEEEEECTT
T ss_pred             ccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhh---hcccccccccccccccee
Confidence            3457899999999  9999999999999999999998642           22222211   10000  012344443  


Q ss_pred             ------CCC------------hhHHHHHhc-------cCCEEEecCCCCC--CC----Cc--chhhhHhHhhHHHHHHHH
Q 043792           86 ------PFD------------YHSLVNALK-------GCSGLFYSFEPPS--DH----ST--YDELTAEVETMAAHNVLE  132 (294)
Q Consensus        86 ------l~~------------~~~~~~~~~-------~~d~Vih~a~~~~--~~----~~--~~~~~~~~n~~~~~~ll~  132 (294)
                            +.+            ++++.++++       ++|++||||+...  ..    ..  ..++.+++|+.++.++++
T Consensus        82 ~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  161 (297)
T 1d7o_A           82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHH
Confidence                  221            334444443       5899999998532  11    11  123789999999999999


Q ss_pred             HHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh----cCCeEE
Q 043792          133 ACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD----RGISMV  207 (294)
Q Consensus       133 ~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~  207 (294)
                      ++.+. ..-.++|++||..+.. +...    .           .      ..|+.+|.+.+.+.+.++.+    +|++++
T Consensus       162 ~~~~~m~~~g~iv~isS~~~~~-~~~~----~-----------~------~~Y~asKaa~~~~~~~la~e~~~~~gi~vn  219 (297)
T 1d7o_A          162 HFLPIMNPGGASISLTYIASER-IIPG----Y-----------G------GGMSSAKAALESDTRVLAFEAGRKQNIRVN  219 (297)
T ss_dssp             HHGGGEEEEEEEEEEECGGGTS-CCTT----C-----------T------TTHHHHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_pred             HHHHHhccCceEEEEecccccc-CCCC----c-----------c------hHHHHHHHHHHHHHHHHHHHhCcccCcEEE
Confidence            99765 1125899999975322 1111    0           0      36999999999999988765    589999


Q ss_pred             EEecCceeCCCCCCCCc---cccccccccCCCccccccHHHHHHHHHhhhcCc--CCCCeEEeecc
Q 043792          208 SINGGLVMGPDVTISNP---YLKGAAEMYEDGVMASVDLRFYVDAHICVFEDV--SSYGRYLCFNH  268 (294)
Q Consensus       208 ilrp~~i~G~~~~~~~~---~~~~~~~~~~~~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~~  268 (294)
                      +++||.+.++.......   +........+-  ..+.+++|+|++++.++...  ..+|+++..++
T Consensus       220 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdg  283 (297)
T 1d7o_A          220 TISAGPLGSRAAKAIGFIDTMIEYSYNNAPI--QKTLTADEVGNAAAFLVSPLASAITGATIYVDN  283 (297)
T ss_dssp             EEEECCCBCCCSSCCSHHHHHHHHHHHHSSS--CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             EEeccccccchhhhccccHHHHHHhhccCCC--CCCCCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence            99999999886322110   00000000111  12678999999999988653  23566544433

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.81  E-value=3.5e-19  Score=161.78  Aligned_cols=219  Identities=14%  Similarity=0.010  Sum_probs=152.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCe-EEEE-ecCCC-------------ChhhHHHHHhhccCCCCeEEEECCCCC
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYT-VHAA-LHNHG-------------KLQCIEEELINYNEEKKLKVFQADPFD   88 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~-~r~~~-------------~~~~l~~~~~~~~~~~~v~~~~~Dl~~   88 (294)
                      .++++||||||+|.||.++++.|+++|++ |+++ +|+..             ..+.+..+  +...+.++.++.+|++|
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~--l~~~g~~v~~~~~Dvtd  326 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAE--LADLGATATVVTCDLTD  326 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHH--HHHHTCEEEEEECCTTS
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHH--HHhcCCEEEEEECCCCC
Confidence            45789999999999999999999999988 5555 67642             22333332  22234579999999999


Q ss_pred             hhHHHHHhcc------CCEEEecCCCCCCCCc---c---hhhhHhHhhHHHHHHHHHHHhcCC-----CcEEEEecCcce
Q 043792           89 YHSLVNALKG------CSGLFYSFEPPSDHST---Y---DELTAEVETMAAHNVLEACAQTNT-----VDKVVFTSSLTA  151 (294)
Q Consensus        89 ~~~~~~~~~~------~d~Vih~a~~~~~~~~---~---~~~~~~~n~~~~~~ll~~~~~~~~-----~~~~v~~Ss~~~  151 (294)
                      .+++.++++.      +|+||||||.......   .   .+..+++|+.|+.++.+++... .     ..+||++||.++
T Consensus       327 ~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~-~~~~~~~~~iV~~SS~a~  405 (525)
T 3qp9_A          327 AEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREA-AAAGGRPPVLVLFSSVAA  405 (525)
T ss_dssp             HHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHT-C----CCCEEEEEEEGGG
T ss_pred             HHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccc-cccCCCCCEEEEECCHHH
Confidence            9999999874      5999999997554221   1   1378999999999999998877 3     689999999874


Q ss_pred             eeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCccccccc-
Q 043792          152 VVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAA-  230 (294)
Q Consensus       152 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~~~~~~~-  230 (294)
                      .. +..+    .                  ..|+.+|...+.+.+.+. ..|+++++|+||.+ +..      +..... 
T Consensus       406 ~~-g~~g----~------------------~~YaaaKa~l~~lA~~~~-~~gi~v~sI~pG~~-~tg------m~~~~~~  454 (525)
T 3qp9_A          406 IW-GGAG----Q------------------GAYAAGTAFLDALAGQHR-ADGPTVTSVAWSPW-EGS------RVTEGAT  454 (525)
T ss_dssp             TT-CCTT----C------------------HHHHHHHHHHHHHHTSCC-SSCCEEEEEEECCB-TTS------GGGSSHH
T ss_pred             cC-CCCC----C------------------HHHHHHHHHHHHHHHHHH-hCCCCEEEEECCcc-ccc------cccchhh
Confidence            33 2222    2                  789999999988876543 35899999999999 222      111110 


Q ss_pred             -cccCCCccccccHHHHHHHHHhhhcCcCCCCeEEeecccccHHHHHHHHH
Q 043792          231 -EMYEDGVMASVDLRFYVDAHICVFEDVSSYGRYLCFNHVINCNEDAMKLA  280 (294)
Q Consensus       231 -~~~~~~~~~~v~v~D~a~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~  280 (294)
                       ..+.......+..+++++++..++..+..  ..++.  .+.|..+...+.
T Consensus       455 ~~~~~~~g~~~l~pee~a~~l~~~l~~~~~--~v~v~--~~dw~~~~~~~~  501 (525)
T 3qp9_A          455 GERLRRLGLRPLAPATALTALDTALGHGDT--AVTIA--DVDWSSFAPGFT  501 (525)
T ss_dssp             HHHHHHTTBCCBCHHHHHHHHHHHHHHTCS--EEEEC--CBCHHHHHHHHH
T ss_pred             HHHHHhcCCCCCCHHHHHHHHHHHHhCCCC--eEEEE--eCCHHHHHhhcc
Confidence             11111222368899999999999976532  22222  344555555543

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.80  E-value=1.1e-18  Score=161.57  Aligned_cols=196  Identities=12%  Similarity=0.050  Sum_probs=134.4

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEec---------CCCChhhHHHHHhhccCCCCeEEEECCCCChhHHH
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALH---------NHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLV   93 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r---------~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~   93 (294)
                      ...++++|||||+|+||+++++.|+++|++|++++|         +.+..+.+.+++..  ....   +.+|+.|.+++.
T Consensus        16 ~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~--~~~~---~~~D~~d~~~~~   90 (613)
T 3oml_A           16 RYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRK--AGGE---AVADYNSVIDGA   90 (613)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHH--TTCC---EEECCCCGGGHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHH--hCCe---EEEEeCCHHHHH
Confidence            566899999999999999999999999999999987         44555554443211  1122   347999998888


Q ss_pred             HHhc-------cCCEEEecCCCCCCCC----c--chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCC
Q 043792           94 NALK-------GCSGLFYSFEPPSDHS----T--YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNH  157 (294)
Q Consensus        94 ~~~~-------~~d~Vih~a~~~~~~~----~--~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~  157 (294)
                      ++++       ++|++|||||......    .  ..+..+++|+.++.++++++...   .+..++|++||.++.. +..
T Consensus        91 ~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~-~~~  169 (613)
T 3oml_A           91 KVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIY-GNF  169 (613)
T ss_dssp             HHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHH-CCT
T ss_pred             HHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcC-CCC
Confidence            7775       4799999999764432    1  12388999999999999987432   2557999999986433 222


Q ss_pred             CCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCccccccccccC
Q 043792          158 RDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNPYLKGAAEMYE  234 (294)
Q Consensus       158 ~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~  234 (294)
                      .    .                  ..|+.+|.+.+.+.+.++.+.   |+++.++.||.+ .+.       ..+..   +
T Consensus       170 ~----~------------------~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~-------~~~~~---~  216 (613)
T 3oml_A          170 G----Q------------------VNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRM-------TEGIL---P  216 (613)
T ss_dssp             T----C------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--------------CCCC---C
T ss_pred             C----C------------------hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chh-------hhhcc---c
Confidence            1    1                  779999999999999988764   899999999864 111       11110   0


Q ss_pred             CCccccccHHHHHHHHHhhhcCc
Q 043792          235 DGVMASVDLRFYVDAHICVFEDV  257 (294)
Q Consensus       235 ~~~~~~v~v~D~a~~i~~~~~~~  257 (294)
                      ......+..+|+|.+++.++...
T Consensus       217 ~~~~~~~~pedvA~~v~~L~s~~  239 (613)
T 3oml_A          217 DILFNELKPKLIAPVVAYLCHES  239 (613)
T ss_dssp             HHHHTTCCGGGTHHHHHHTTSTT
T ss_pred             hhhhhcCCHHHHHHHHHHhcCCC
Confidence            11122567899999999988654

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.78  E-value=4.2e-18  Score=146.53  Aligned_cols=169  Identities=8%  Similarity=0.016  Sum_probs=119.1

Q ss_pred             CCeEEEeCCCc--hHHHHHHHHHHHCCCeEEEEecCC---------CChhhHHHHHhh-ccCCCCeEEEECCCCCh--h-
Q 043792           26 TKTVCVMDASG--HFASALVRRLLLRGYTVHAALHNH---------GKLQCIEEELIN-YNEEKKLKVFQADPFDY--H-   90 (294)
Q Consensus        26 ~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~l~~~~~~-~~~~~~v~~~~~Dl~~~--~-   90 (294)
                      +++++||||++  .||.++++.|+++|++|++.+|++         ++.+........ ......+.++.+|+++.  + 
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~   81 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence            57999999975  999999999999999999776543         111111110000 11123478889999877  6 


Q ss_pred             -----------------HHHHHhc-------cCCEEEecCCCCC--CCC----c--chhhhHhHhhHHHHHHHHHHHhc-
Q 043792           91 -----------------SLVNALK-------GCSGLFYSFEPPS--DHS----T--YDELTAEVETMAAHNVLEACAQT-  137 (294)
Q Consensus        91 -----------------~~~~~~~-------~~d~Vih~a~~~~--~~~----~--~~~~~~~~n~~~~~~ll~~~~~~-  137 (294)
                                       ++.++++       .+|++|||||...  ...    .  ..+..+++|+.++.++.+++... 
T Consensus        82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m  161 (329)
T 3lt0_A           82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence                             6665553       4799999998632  111    1  11378999999999999998766 


Q ss_pred             -CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccc-hhHhhHHHHHHHHHHHHHh----cCCeEEEEec
Q 043792          138 -NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL-WHGLSKTLAEKTAWALAMD----RGISMVSING  211 (294)
Q Consensus       138 -~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~-~Y~~sK~~~e~~~~~~~~~----~~~~~~ilrp  211 (294)
                       .+ .++|++||..+.......                       . .|+.||.+.+.+.+.++.+    +++++.++.|
T Consensus       162 ~~~-g~Iv~isS~~~~~~~~~~-----------------------~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~P  217 (329)
T 3lt0_A          162 KPQ-SSIISLTYHASQKVVPGY-----------------------GGGMSSAKAALESDTRVLAYHLGRNYNIRINTISA  217 (329)
T ss_dssp             EEE-EEEEEEECGGGTSCCTTC-----------------------TTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             hhC-CeEEEEeCccccCCCCcc-----------------------hHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEec
Confidence             22 589999997632211111                       3 7999999999988887755    4899999999


Q ss_pred             CceeCCC
Q 043792          212 GLVMGPD  218 (294)
Q Consensus       212 ~~i~G~~  218 (294)
                      |.|..+.
T Consensus       218 G~v~T~~  224 (329)
T 3lt0_A          218 GPLKSRA  224 (329)
T ss_dssp             CCCCCHH
T ss_pred             ceeechh
Confidence            9997553

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.77  E-value=8.6e-18  Score=143.73  Aligned_cols=219  Identities=14%  Similarity=0.051  Sum_probs=137.9

Q ss_pred             CCCCeEEEeCC--CchHHHHHHHHHHHCCCeEEEEecCC-----------CChhhHHHHHhhccCC--CCeEEEECCC--
Q 043792           24 NATKTVCVMDA--SGHFASALVRRLLLRGYTVHAALHNH-----------GKLQCIEEELINYNEE--KKLKVFQADP--   86 (294)
Q Consensus        24 ~~~~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~-----------~~~~~l~~~~~~~~~~--~~v~~~~~Dl--   86 (294)
                      .+++++|||||  +|+||+++++.|+++|++|++++|++           ...+.+.+   .....  ..+.++.+|+  
T Consensus         7 l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~d~~~   83 (315)
T 2o2s_A            7 LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRK---LPDGSLIEFAGVYPLDAAF   83 (315)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHB---CTTSCBCCCSCEEECCTTC
T ss_pred             CCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhh---hhccccccccccccccccc
Confidence            45689999999  89999999999999999999998753           11111211   11000  0134555543  


Q ss_pred             ----------C--------ChhHHHHHhc-------cCCEEEecCCCCC--CCC----c--chhhhHhHhhHHHHHHHHH
Q 043792           87 ----------F--------DYHSLVNALK-------GCSGLFYSFEPPS--DHS----T--YDELTAEVETMAAHNVLEA  133 (294)
Q Consensus        87 ----------~--------~~~~~~~~~~-------~~d~Vih~a~~~~--~~~----~--~~~~~~~~n~~~~~~ll~~  133 (294)
                                +        |.+++.++++       ++|++|||||...  ...    .  ..+..+++|+.++.+++++
T Consensus        84 ~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~  163 (315)
T 2o2s_A           84 DKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQH  163 (315)
T ss_dssp             SSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             cccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHH
Confidence                      2        2334544443       5899999998542  111    1  1137899999999999999


Q ss_pred             HHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh----cCCeEEE
Q 043792          134 CAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD----RGISMVS  208 (294)
Q Consensus       134 ~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~i  208 (294)
                      +... ..-.++|++||..+.. +...    .           .      ..|+.+|.+.+.+.+.++.+    +|+++++
T Consensus       164 ~~~~m~~~g~Iv~isS~~~~~-~~~~----~-----------~------~~Y~asKaal~~l~~~la~el~~~~gIrvn~  221 (315)
T 2o2s_A          164 FGPIMNEGGSAVTLSYLAAER-VVPG----Y-----------G------GGMSSAKAALESDTRTLAWEAGQKYGVRVNA  221 (315)
T ss_dssp             HSTTEEEEEEEEEEEEGGGTS-CCTT----C-----------C------TTHHHHHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred             HHHHHhcCCEEEEEecccccc-cCCC----c-----------c------HHHHHHHHHHHHHHHHHHHHhCcccCeEEEE
Confidence            8765 1115899999975322 1111    0           0      36999999999999888765    5899999


Q ss_pred             EecCceeCCCCCCCC-----cccccc----ccccCCCccccccHHHHHHHHHhhhcCc--CCCCeEEeeccc
Q 043792          209 INGGLVMGPDVTISN-----PYLKGA----AEMYEDGVMASVDLRFYVDAHICVFEDV--SSYGRYLCFNHV  269 (294)
Q Consensus       209 lrp~~i~G~~~~~~~-----~~~~~~----~~~~~~~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~~~  269 (294)
                      ++||.|..+......     .+....    ....+-+  .+..++|+|++++.++...  ..+|+++..++.
T Consensus       222 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  291 (315)
T 2o2s_A          222 ISAGPLKSRAASAIGKSGEKSFIDYAIDYSYNNAPLR--RDLHSDDVGGAALFLLSPLARAVSGVTLYVDNG  291 (315)
T ss_dssp             EEECCCCCHHHHHTTCSSSSCHHHHHHHHHHHHSSSC--CCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             EecccccchhhhhccccccchhHHHHHHHHhccCCCC--CCCCHHHHHHHHHHHhCchhccCcCCEEEECCC
Confidence            999999655310000     000000    0001111  2678999999999998743  336776554443

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.76  E-value=9.4e-18  Score=143.75  Aligned_cols=222  Identities=12%  Similarity=0.081  Sum_probs=123.8

Q ss_pred             CCCCeEEEeCC--CchHHHHHHHHHHHCCCeEEEEecCC-----------CChhh-----------HHHHHhhccCC---
Q 043792           24 NATKTVCVMDA--SGHFASALVRRLLLRGYTVHAALHNH-----------GKLQC-----------IEEELINYNEE---   76 (294)
Q Consensus        24 ~~~~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~-----------~~~~~-----------l~~~~~~~~~~---   76 (294)
                      ..++++|||||  +|+||+++++.|+++|++|++++|++           ++.+.           +.++  +....   
T Consensus         7 l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~   84 (319)
T 2ptg_A            7 LRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAE--AAEKPVDL   84 (319)
T ss_dssp             CTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC----------------------------------
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHH--hhhccccc
Confidence            45689999999  89999999999999999999998642           11111           1110  00000   


Q ss_pred             CCeEEEECCC--CC------------------hhHHHHHhc-------cCCEEEecCCCCC--CC----Ccc--hhhhHh
Q 043792           77 KKLKVFQADP--FD------------------YHSLVNALK-------GCSGLFYSFEPPS--DH----STY--DELTAE  121 (294)
Q Consensus        77 ~~v~~~~~Dl--~~------------------~~~~~~~~~-------~~d~Vih~a~~~~--~~----~~~--~~~~~~  121 (294)
                      ....++.+|+  .+                  .+++.++++       ++|++||||+...  ..    ...  .+..++
T Consensus        85 ~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~  164 (319)
T 2ptg_A           85 VFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVS  164 (319)
T ss_dssp             CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHH
T ss_pred             cccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHh
Confidence            0135555543  22                  224444443       5899999998542  11    111  137899


Q ss_pred             HhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHH
Q 043792          122 VETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALA  199 (294)
Q Consensus       122 ~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~  199 (294)
                      +|+.++.++++++...  ++ .++|++||..+.. +...    .           .      ..|+.+|.+.+.+.+.++
T Consensus       165 vN~~g~~~l~~~~~~~m~~~-g~Iv~isS~~~~~-~~~~----~-----------~------~~Y~asKaal~~l~~~la  221 (319)
T 2ptg_A          165 SSSYSFVSLLQHFLPLMKEG-GSALALSYIASEK-VIPG----Y-----------G------GGMSSAKAALESDCRTLA  221 (319)
T ss_dssp             HHTHHHHHHHHHHGGGEEEE-EEEEEEEECC----------------------------------------THHHHHHHH
T ss_pred             HhhHHHHHHHHHHHHHHhcC-ceEEEEecccccc-ccCc----c-----------c------hhhHHHHHHHHHHHHHHH
Confidence            9999999999998765  22 6899999975322 1111    0           0      369999999999998887


Q ss_pred             Hh----cCCeEEEEecCceeCCCCCCCCc-----cccccccccCC--CccccccHHHHHHHHHhhhcCc--CCCCeEEee
Q 043792          200 MD----RGISMVSINGGLVMGPDVTISNP-----YLKGAAEMYED--GVMASVDLRFYVDAHICVFEDV--SSYGRYLCF  266 (294)
Q Consensus       200 ~~----~~~~~~ilrp~~i~G~~~~~~~~-----~~~~~~~~~~~--~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~  266 (294)
                      .+    +|+++++++||.|..+.......     +.......+..  ....+..++|+|++++.++...  ..+|+++..
T Consensus       222 ~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~v  301 (319)
T 2ptg_A          222 FEAGRARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYV  301 (319)
T ss_dssp             HHHHHHHCCEEEEEEECCCC-------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEE
T ss_pred             HHhccccCeeEEEEeeCCccChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEE
Confidence            65    58999999999997765211000     00000000000  1112678999999999998753  346766554


Q ss_pred             cccc
Q 043792          267 NHVI  270 (294)
Q Consensus       267 ~~~~  270 (294)
                      ++..
T Consensus       302 dGG~  305 (319)
T 2ptg_A          302 DNGL  305 (319)
T ss_dssp             STTC
T ss_pred             CCCc
Confidence            4443

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.72  E-value=8.6e-16  Score=141.77  Aligned_cols=227  Identities=11%  Similarity=-0.024  Sum_probs=150.9

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCC-CChhHHH-HH---hc
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADP-FDYHSLV-NA---LK   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl-~~~~~~~-~~---~~   97 (294)
                      ..++++++||||++.||+.+++.|+++|++|++.+|+.  .+.+.+++  .....++..+.+|+ .+.+.+. ++   +-
T Consensus       319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i--~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G  394 (604)
T 2et6_A          319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEI--KAAGGEAWPDQHDVAKDSEAIIKNVIDKYG  394 (604)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHH--HHTTCEEEEECCCHHHHHHHHHHHHHHHHS
T ss_pred             ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHH--HhcCCeEEEEEcChHHHHHHHHHHHHHhcC
Confidence            34578999999999999999999999999999987632  23333322  11234566778888 5554432 22   23


Q ss_pred             cCCEEEecCCCCCCCC----cc--hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           98 GCSGLFYSFEPPSDHS----TY--DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~----~~--~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                      ++|++|||||......    ..  .+..+++|+.++.++.+++...   ++-.++|++||..+.. +...    .     
T Consensus       395 ~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~-~~~~----~-----  464 (604)
T 2et6_A          395 TIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIY-GNFG----Q-----  464 (604)
T ss_dssp             CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHS-CCTT----B-----
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcc-CCCC----C-----
Confidence            6899999999754321    11  2388999999999998887543   2446999999976432 2211    1     


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHH
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRF  245 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  245 (294)
                                   ..|+.||.+...+.+.++.+   +|+++.+|.||. -.+.       .....   +.........+|
T Consensus       465 -------------~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m-------~~~~~---~~~~~~~~~pe~  520 (604)
T 2et6_A          465 -------------ANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAM-------TLSIM---REQDKNLYHADQ  520 (604)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC-------------------CCSSCGGG
T ss_pred             -------------hhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCcc-------ccccC---chhhccCCCHHH
Confidence                         67999999999999988876   489999999983 2221       11100   000112457899


Q ss_pred             HHHHHHhhhcCcC-CCCeE-Eeec------------------ccccHHHHHHHHHHHhCCCC
Q 043792          246 YVDAHICVFEDVS-SYGRY-LCFN------------------HVINCNEDAMKLARMLLPPS  287 (294)
Q Consensus       246 ~a~~i~~~~~~~~-~~~~~-~~~~------------------~~~s~~~~~~~~~~~~~~~~  287 (294)
                      +|.+++.++.... .+|+. .+.+                  ..++..++.+.+.+....+.
T Consensus       521 vA~~v~~L~s~~~~itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  582 (604)
T 2et6_A          521 VAPLLVYLGTDDVPVTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITDFTT  582 (604)
T ss_dssp             THHHHHHTTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTCCSS
T ss_pred             HHHHHHHHhCCccCCCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhcccc
Confidence            9999999886433 35543 3322                  23578888888877665543

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.70  E-value=4.2e-16  Score=155.67  Aligned_cols=207  Identities=9%  Similarity=-0.003  Sum_probs=141.6

Q ss_pred             CCCCCeEEEeCCCch-HHHHHHHHHHHCCCeEEEEe-cCCCChhhHHHHHh--hccCCCCeEEEECCCCChhHHHHHhc-
Q 043792           23 SNATKTVCVMDASGH-FASALVRRLLLRGYTVHAAL-HNHGKLQCIEEELI--NYNEEKKLKVFQADPFDYHSLVNALK-   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~-iG~~l~~~L~~~g~~V~~~~-r~~~~~~~l~~~~~--~~~~~~~v~~~~~Dl~~~~~~~~~~~-   97 (294)
                      ...++++|||||+|+ ||.++++.|+++|++|++++ |+.+....+.+++.  ....+.++.++.+|++|.+++..+++ 
T Consensus       672 ~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~  751 (1887)
T 2uv8_A          672 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF  751 (1887)
T ss_dssp             CCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHH
Confidence            356789999999998 99999999999999999984 55544433332210  11124568899999999998887763 


Q ss_pred             ------------cCCEEEecCCCCCCC-C----c----chhhhHhHhhHHHHHHHHHHHhc-----CCCcEEEEecCcce
Q 043792           98 ------------GCSGLFYSFEPPSDH-S----T----YDELTAEVETMAAHNVLEACAQT-----NTVDKVVFTSSLTA  151 (294)
Q Consensus        98 ------------~~d~Vih~a~~~~~~-~----~----~~~~~~~~n~~~~~~ll~~~~~~-----~~~~~~v~~Ss~~~  151 (294)
                                  .+|++|||||..... .    .    ..+..+++|+.++.+++++++..     .+-.+||++||..+
T Consensus       752 i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag  831 (1887)
T 2uv8_A          752 IYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHG  831 (1887)
T ss_dssp             HHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTT
T ss_pred             HHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHh
Confidence                        489999999975433 1    1    11378999999999999987432     12258999999753


Q ss_pred             eeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHH-HHHHHHhcC--CeEEEEecCceeCCCCCCCCccccc
Q 043792          152 VVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKT-AWALAMDRG--ISMVSINGGLVMGPDVTISNPYLKG  228 (294)
Q Consensus       152 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~-~~~~~~~~~--~~~~ilrp~~i~G~~~~~~~~~~~~  228 (294)
                      ...  ..                       ..|+.+|.+.+.+ .+.++.+.+  +++++++||.+.+............
T Consensus       832 ~~g--g~-----------------------~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~~~~~  886 (1887)
T 2uv8_A          832 TFG--GD-----------------------GMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAE  886 (1887)
T ss_dssp             CSS--CB-----------------------TTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----CCTTHH
T ss_pred             ccC--CC-----------------------chHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccchhHHH
Confidence            221  11                       6799999999998 565555443  9999999999984321111001000


Q ss_pred             cccccCCCccccccHHHHHHHHHhhhcCc
Q 043792          229 AAEMYEDGVMASVDLRFYVDAHICVFEDV  257 (294)
Q Consensus       229 ~~~~~~~~~~~~v~v~D~a~~i~~~~~~~  257 (294)
                         ........+...+|+|.+++.++...
T Consensus       887 ---~~~~~plr~~sPEEVA~avlfLaSd~  912 (1887)
T 2uv8_A          887 ---GIEKMGVRTFSQKEMAFNLLGLLTPE  912 (1887)
T ss_dssp             ---HHHTTSCCCEEHHHHHHHHHGGGSHH
T ss_pred             ---HHHhcCCCCCCHHHHHHHHHHHhCCC
Confidence               00001113558999999999998654

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.69  E-value=9.8e-17  Score=155.64  Aligned_cols=207  Identities=9%  Similarity=-0.010  Sum_probs=140.1

Q ss_pred             CCCCCeEEEeCCCch-HHHHHHHHHHHCCCeEEEE-ecCCCChhhHHHHHhh--ccCCCCeEEEECCCCChhHHHHHhc-
Q 043792           23 SNATKTVCVMDASGH-FASALVRRLLLRGYTVHAA-LHNHGKLQCIEEELIN--YNEEKKLKVFQADPFDYHSLVNALK-   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~-iG~~l~~~L~~~g~~V~~~-~r~~~~~~~l~~~~~~--~~~~~~v~~~~~Dl~~~~~~~~~~~-   97 (294)
                      ..+++++|||||+|+ ||+++++.|+++|++|+++ .|+.+..+.+.+++..  ...+.++.++.+|++|.+++.++++ 
T Consensus       473 sL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~  552 (1688)
T 2pff_A          473 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF  552 (1688)
T ss_dssp             CCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHH
T ss_pred             ccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHH
Confidence            345789999999998 9999999999999999998 4665555444332211  1113468899999999998887763 


Q ss_pred             ------------cCCEEEecCCCCCCC---Cc-c-----hhhhHhHhhHHHHHHHHHHHhc-----CCCcEEEEecCcce
Q 043792           98 ------------GCSGLFYSFEPPSDH---ST-Y-----DELTAEVETMAAHNVLEACAQT-----NTVDKVVFTSSLTA  151 (294)
Q Consensus        98 ------------~~d~Vih~a~~~~~~---~~-~-----~~~~~~~n~~~~~~ll~~~~~~-----~~~~~~v~~Ss~~~  151 (294)
                                  .+|++|||||.....   .. .     .+..+++|+.++.+++++++..     .+-.+||++||..+
T Consensus       553 I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG  632 (1688)
T 2pff_A          553 IYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHG  632 (1688)
T ss_dssp             HHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTT
T ss_pred             HHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHh
Confidence                        489999999975432   11 1     1388999999999999987322     12258999999753


Q ss_pred             eeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHH-HHHHHhcC--CeEEEEecCceeCCCCCCCCccccc
Q 043792          152 VVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTA-WALAMDRG--ISMVSINGGLVMGPDVTISNPYLKG  228 (294)
Q Consensus       152 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~-~~~~~~~~--~~~~ilrp~~i~G~~~~~~~~~~~~  228 (294)
                      .. +  .    .                  ..|+.||.+.+.+. +.++.+.+  ++++++.||.+.|............
T Consensus       633 ~~-G--g----~------------------saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~e~~~~  687 (1688)
T 2pff_A          633 TF-G--G----D------------------GMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAE  687 (1688)
T ss_dssp             TS-S--C----B------------------TTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTTTTCST
T ss_pred             cc-C--C----c------------------hHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCchHHHH
Confidence            22 1  1    1                  67999999999884 43443332  8889999999975321111001010


Q ss_pred             cccccCCCccccccHHHHHHHHHhhhcCc
Q 043792          229 AAEMYEDGVMASVDLRFYVDAHICVFEDV  257 (294)
Q Consensus       229 ~~~~~~~~~~~~v~v~D~a~~i~~~~~~~  257 (294)
                         ........+...+|+|++++.++...
T Consensus       688 ---~l~~iplR~~sPEEVA~aIlFLaSd~  713 (1688)
T 2pff_A          688 ---GIEKMGVRTFSQKEMAFNLLGLLTPE  713 (1688)
T ss_dssp             ---TTSSSSCCCCCCCTTHHHHHHHTSTT
T ss_pred             ---HHHhCCCCCCCHHHHHHHHHHHhCCC
Confidence               01111112457899999999998654

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.67  E-value=1.3e-15  Score=151.79  Aligned_cols=206  Identities=8%  Similarity=-0.045  Sum_probs=139.3

Q ss_pred             CCCCCeEEEeCCCch-HHHHHHHHHHHCCCeEEEEec-CCCChhhHHHHHh--hccCCCCeEEEECCCCChhHHHHHhc-
Q 043792           23 SNATKTVCVMDASGH-FASALVRRLLLRGYTVHAALH-NHGKLQCIEEELI--NYNEEKKLKVFQADPFDYHSLVNALK-   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~-iG~~l~~~L~~~g~~V~~~~r-~~~~~~~l~~~~~--~~~~~~~v~~~~~Dl~~~~~~~~~~~-   97 (294)
                      ...++++|||||+|. ||.++++.|+++|++|+++++ +.+......+++.  ....+.++.++.+|++|.+++.++++ 
T Consensus       649 ~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~  728 (1878)
T 2uv9_A          649 TFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNY  728 (1878)
T ss_dssp             CCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHH
Confidence            345789999999999 999999999999999999864 4433332222110  11224568899999999998887763 


Q ss_pred             ----------cCCEEEecCCCCCCC---C-cc-----hhhhHhHhhHHHHHHHHHHHhc-----CCCcEEEEecCcceee
Q 043792           98 ----------GCSGLFYSFEPPSDH---S-TY-----DELTAEVETMAAHNVLEACAQT-----NTVDKVVFTSSLTAVV  153 (294)
Q Consensus        98 ----------~~d~Vih~a~~~~~~---~-~~-----~~~~~~~n~~~~~~ll~~~~~~-----~~~~~~v~~Ss~~~~~  153 (294)
                                .+|+||||||.....   . ..     ....+++|+.++.+++++++..     .+..+||++||..+..
T Consensus       729 i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~  808 (1878)
T 2uv9_A          729 IYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTF  808 (1878)
T ss_dssp             HHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSS
T ss_pred             HHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhcc
Confidence                      479999999975432   1 11     1388999999999988773211     1235899999975322


Q ss_pred             eCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh-c--CCeEEEEecCcee-CCCCCCCCcccccc
Q 043792          154 WNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD-R--GISMVSINGGLVM-GPDVTISNPYLKGA  229 (294)
Q Consensus       154 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~--~~~~~ilrp~~i~-G~~~~~~~~~~~~~  229 (294)
                      .  ..                       ..|+.+|.+.+.+.+.+..+ .  .++++++.||.+- .+.... .....  
T Consensus       809 g--g~-----------------------~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~-~~~~~--  860 (1878)
T 2uv9_A          809 G--ND-----------------------GLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSA-NNLVA--  860 (1878)
T ss_dssp             S--CC-----------------------SSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSH-HHHTH--
T ss_pred             C--Cc-----------------------hHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCccccc-chhhH--
Confidence            1  11                       57999999999987765543 1  3999999999987 333110 00000  


Q ss_pred             ccccCCCccccccHHHHHHHHHhhhcCc
Q 043792          230 AEMYEDGVMASVDLRFYVDAHICVFEDV  257 (294)
Q Consensus       230 ~~~~~~~~~~~v~v~D~a~~i~~~~~~~  257 (294)
                       .........+...+|+|++++.++...
T Consensus       861 -~~~~~~plr~~sPeEVA~avlfLaSd~  887 (1878)
T 2uv9_A          861 -EGVEKLGVRTFSQQEMAFNLLGLMAPA  887 (1878)
T ss_dssp             -HHHHTTTCCCBCHHHHHHHHHHHHSHH
T ss_pred             -HHHHhcCCCCCCHHHHHHHHHHHhCCc
Confidence             001011112458999999999988654

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.65  E-value=1.7e-15  Score=143.94  Aligned_cols=204  Identities=14%  Similarity=0.108  Sum_probs=145.0

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHH-HCCCe-EEEEecC---CCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc
Q 043792           24 NATKTVCVMDASGHFASALVRRLL-LRGYT-VHAALHN---HGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG   98 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~-~~g~~-V~~~~r~---~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~   98 (294)
                      .+++++|||||+|.||+.+++.|+ ++|.+ |++++|+   .+..+.+.++  +...+.++.++.+|++|.+++.++++.
T Consensus       528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~--l~~~G~~v~~~~~Dvsd~~~v~~~~~~  605 (795)
T 3slk_A          528 DAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQ--LTAYGAEVSLQACDVADRETLAKVLAS  605 (795)
T ss_dssp             CTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHH--HHHTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             ccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHH--HHhcCCcEEEEEeecCCHHHHHHHHHH
Confidence            457899999999999999999999 78984 8888998   3334444333  223456789999999999999988863


Q ss_pred             ------CCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           99 ------CSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        99 ------~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                            +|+|||||+........      .+..+++|+.|+.++.+++..  .. +||++||.++.. +..+    .   
T Consensus       606 ~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~--~l-~iV~~SS~ag~~-g~~g----~---  674 (795)
T 3slk_A          606 IPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP--DV-ALVLFSSVSGVL-GSGG----Q---  674 (795)
T ss_dssp             SCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT--TS-EEEEEEETHHHH-TCSS----C---
T ss_pred             HHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh--CC-EEEEEccHHhcC-CCCC----C---
Confidence                  59999999986543221      137899999999999999733  34 899999987543 3222    2   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHHH
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFY  246 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~  246 (294)
                                     ..|+.+|...+.+.+.+. ..|+++++|.||.+-+.+....  ................+..++.
T Consensus       675 ---------------~~YaAaka~~~alA~~~~-~~Gi~v~sI~pG~v~t~g~~~~--~~~~~~~~~~~~g~~~l~~~e~  736 (795)
T 3slk_A          675 ---------------GNYAAANSFLDALAQQRQ-SRGLPTRSLAWGPWAEHGMAST--LREAEQDRLARSGLLPISTEEG  736 (795)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHH-HTTCCEEEEEECCCSCCCHHHH--HHHHHHHHHHHTTBCCCCHHHH
T ss_pred             ---------------HHHHHHHHHHHHHHHHHH-HcCCeEEEEECCeECcchhhcc--ccHHHHHHHHhcCCCCCCHHHH
Confidence                           789999988888777665 4599999999998865431000  0000001111122235778888


Q ss_pred             HHHHHhhhcCcC
Q 043792          247 VDAHICVFEDVS  258 (294)
Q Consensus       247 a~~i~~~~~~~~  258 (294)
                      .+.+..++..+.
T Consensus       737 ~~~~~~~l~~~~  748 (795)
T 3slk_A          737 LSQFDAACGGAH  748 (795)
T ss_dssp             HHHHHHHHTSSC
T ss_pred             HHHHHHHHhCCC
Confidence            888888886654

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.64  E-value=1.2e-14  Score=125.41  Aligned_cols=205  Identities=12%  Similarity=0.063  Sum_probs=135.5

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHH-CCCeEEEEecCCCChh------------hHHHHHhhccCCCCeEEEECCCCChh
Q 043792           24 NATKTVCVMDASGHFASALVRRLLL-RGYTVHAALHNHGKLQ------------CIEEELINYNEEKKLKVFQADPFDYH   90 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~------------~l~~~~~~~~~~~~v~~~~~Dl~~~~   90 (294)
                      ..+|++|||||++.||+.+++.|++ +|++|++++|+.+...            .+.+.  ....+..+..+.+|++|++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~--~~~~G~~a~~i~~Dvtd~~  122 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKF--AAQKGLYAKSINGDAFSDE  122 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHH--HHHTTCCEEEEESCTTSHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHH--HHhcCCceEEEECCCCCHH
Confidence            4578999999999999999999999 9999999988765432            12211  1223456888999999998


Q ss_pred             HHHHHhc-------cCCEEEecCCCCC-------------CC------------------------Ccch---hhhHhHh
Q 043792           91 SLVNALK-------GCSGLFYSFEPPS-------------DH------------------------STYD---ELTAEVE  123 (294)
Q Consensus        91 ~~~~~~~-------~~d~Vih~a~~~~-------------~~------------------------~~~~---~~~~~~n  123 (294)
                      ++.++++       ++|++|||||...             ..                        ...+   +..+++|
T Consensus       123 ~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn  202 (405)
T 3zu3_A          123 IKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVM  202 (405)
T ss_dssp             HHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhh
Confidence            8877765       4799999988631             00                        0111   2667788


Q ss_pred             hHHHH-HHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHH
Q 043792          124 TMAAH-NVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALA  199 (294)
Q Consensus       124 ~~~~~-~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~  199 (294)
                      ..+.. .+++++...   .+-.++|++||.++..... .    .                ....|+.+|.+.+.+.+.++
T Consensus       203 ~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p-~----~----------------~~~aY~AaKaal~~ltrsLA  261 (405)
T 3zu3_A          203 GGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHD-I----Y----------------WNGSIGAAKKDLDQKVLAIR  261 (405)
T ss_dssp             SSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTT-T----T----------------TTSHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCC-C----c----------------cchHHHHHHHHHHHHHHHHH
Confidence            77765 555554422   0125899999976322111 0    0                00579999999999999988


Q ss_pred             Hh---c-CCeEEEEecCceeCCCCCCCCccccccccccC----CCccccccHHHHHHHHHhhhcC
Q 043792          200 MD---R-GISMVSINGGLVMGPDVTISNPYLKGAAEMYE----DGVMASVDLRFYVDAHICVFED  256 (294)
Q Consensus       200 ~~---~-~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~----~~~~~~v~v~D~a~~i~~~~~~  256 (294)
                      .+   + |+++.++.||.+-.+..   . .+...+ .+.    ..-..+-..+|+++++..++..
T Consensus       262 ~Ela~~~GIRVNaVaPG~i~T~~s---~-~ip~~p-~y~~~l~~~mkr~G~~Ed~a~~i~~L~sd  321 (405)
T 3zu3_A          262 ESLAAHGGGDARVSVLKAVVSQAS---S-AIPMMP-LYLSLLFKVMKEKGTHEGCIEQVYSLYKD  321 (405)
T ss_dssp             HHHHTTTSCEEEEEECCCCCCHHH---H-TSTTHH-HHHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred             HHhCcccCeEEEEEEeCCCcCchh---h-cCCCCc-HHHHHHHHHHhcCCCcHHHHHHHHHHHhc
Confidence            76   4 89999999999855431   1 111100 000    0000144458899999888864

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.61  E-value=1.6e-14  Score=133.41  Aligned_cols=195  Identities=14%  Similarity=0.018  Sum_probs=130.0

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC---------CChhhHHHHHhhccCCCCeEEEECCCCChhHHHH
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNH---------GKLQCIEEELINYNEEKKLKVFQADPFDYHSLVN   94 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~   94 (294)
                      .++++++||||++.||+.+++.|+++|++|++.+|+.         +..+.+.+++.  .....+   .+|+.|.+++++
T Consensus         6 l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~--~~g~~~---~~d~~d~~~~~~   80 (604)
T 2et6_A            6 FKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIV--KNGGVA---VADYNNVLDGDK   80 (604)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHH--HTTCEE---EEECCCTTCHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHH--hcCCeE---EEEcCCHHHHHH
Confidence            4578999999999999999999999999999988754         33344433321  112222   246655543333


Q ss_pred             Hh-------ccCCEEEecCCCCCCCC----cc--hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCC
Q 043792           95 AL-------KGCSGLFYSFEPPSDHS----TY--DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHR  158 (294)
Q Consensus        95 ~~-------~~~d~Vih~a~~~~~~~----~~--~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~  158 (294)
                      ++       -++|++|||||......    ..  .+..+++|+.++.++.+++...   ++-.++|++||..+.. +...
T Consensus        81 ~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~-~~~~  159 (604)
T 2et6_A           81 IVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLY-GNFG  159 (604)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH-CCTT
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcC-CCCC
Confidence            32       35899999999754221    11  1388999999999988876543   1446999999986432 2211


Q ss_pred             CCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCC
Q 043792          159 DNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYED  235 (294)
Q Consensus       159 ~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~  235 (294)
                          .                  ..|+.+|.+...+.+.++.+   +|+++.+|.|+ +..+       +.....   ..
T Consensus       160 ----~------------------~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~-------m~~~~~---~~  206 (604)
T 2et6_A          160 ----Q------------------ANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSR-------MTESIM---PP  206 (604)
T ss_dssp             ----B------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCH-------HHHTTS---CH
T ss_pred             ----c------------------hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCc-------cccccC---Ch
Confidence                1                  67999999999999998876   48999999996 3111       111100   00


Q ss_pred             CccccccHHHHHHHHHhhhcCc
Q 043792          236 GVMASVDLRFYVDAHICVFEDV  257 (294)
Q Consensus       236 ~~~~~v~v~D~a~~i~~~~~~~  257 (294)
                      ........+|+|.+++.++...
T Consensus       207 ~~~~~~~pe~vA~~v~~L~s~~  228 (604)
T 2et6_A          207 PMLEKLGPEKVAPLVLYLSSAE  228 (604)
T ss_dssp             HHHTTCSHHHHHHHHHHHTSSS
T ss_pred             hhhccCCHHHHHHHHHHHhCCc
Confidence            0011457899999999988654

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.61  E-value=1.7e-14  Score=125.67  Aligned_cols=206  Identities=14%  Similarity=0.014  Sum_probs=133.2

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHH-CCCeEEEEecCCCChhh------------HHHHHhhccCCCCeEEEECCCCChhH
Q 043792           25 ATKTVCVMDASGHFASALVRRLLL-RGYTVHAALHNHGKLQC------------IEEELINYNEEKKLKVFQADPFDYHS   91 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~------------l~~~~~~~~~~~~v~~~~~Dl~~~~~   91 (294)
                      .+|++|||||++.||+++++.|++ +|++|++++|+....+.            +.++  ....+..+..+.+|++|+++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~--~~~~G~~a~~i~~Dvtd~~~  137 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKH--AKAAGLYSKSINGDAFSDAA  137 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHH--HHHTTCCEEEEESCTTSHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHH--HHhcCCcEEEEEecCCCHHH
Confidence            478999999999999999999999 99999999987654321            1121  12234568899999999988


Q ss_pred             HHHHhc--------cCCEEEecCCCC-------------CCC-------------------------Ccch--hhhHhHh
Q 043792           92 LVNALK--------GCSGLFYSFEPP-------------SDH-------------------------STYD--ELTAEVE  123 (294)
Q Consensus        92 ~~~~~~--------~~d~Vih~a~~~-------------~~~-------------------------~~~~--~~~~~~n  123 (294)
                      +.++++        ++|++|||||..             ...                         ...+  +..+++|
T Consensus       138 v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn  217 (422)
T 3s8m_A          138 RAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVM  217 (422)
T ss_dssp             HHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhh
Confidence            766653        479999998762             000                         0111  2556666


Q ss_pred             hHHHH-HHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHH
Q 043792          124 TMAAH-NVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALA  199 (294)
Q Consensus       124 ~~~~~-~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~  199 (294)
                      ..+.. .+++++...   .+-.++|++||.++.....                     ......|+.||.+.+.+.+.++
T Consensus       218 ~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p---------------------~~~~~aY~ASKaAl~~lTrsLA  276 (422)
T 3s8m_A          218 GGQDWELWIDALEGAGVLADGARSVAFSYIGTEITWP---------------------IYWHGALGKAKVDLDRTAQRLN  276 (422)
T ss_dssp             SSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHH---------------------HHTSHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCC---------------------CccchHHHHHHHHHHHHHHHHH
Confidence            66654 556655432   0124899999975321100                     0001579999999999999988


Q ss_pred             Hhc---CCeEEEEecCceeCCCCCCCCcccccccc---ccCCCccccccHHHHHHHHHhhhcCc
Q 043792          200 MDR---GISMVSINGGLVMGPDVTISNPYLKGAAE---MYEDGVMASVDLRFYVDAHICVFEDV  257 (294)
Q Consensus       200 ~~~---~~~~~ilrp~~i~G~~~~~~~~~~~~~~~---~~~~~~~~~v~v~D~a~~i~~~~~~~  257 (294)
                      .+.   |+++.++.||.|-.+....    +.+.+.   .....-..+-..+|||+++..++...
T Consensus       277 ~Ela~~GIRVNaVaPG~i~T~~~~~----ip~~~~~~~~~~~~m~r~G~pEdva~~v~~L~sd~  336 (422)
T 3s8m_A          277 ARLAKHGGGANVAVLKSVVTQASAA----IPVMPLYISMVYKIMKEKGLHEGTIEQLDRLFRER  336 (422)
T ss_dssp             HHHHTTTCEEEEEEECCCCCTTGGG----STHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHT
T ss_pred             HHhCccCEEEEEEEcCCCcChhhhc----CCCChHHHHHHHhhhcCCcChHHHHHHHHHHhcch
Confidence            774   8999999999996655211    111000   00000001333588999988887543

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.60  E-value=4.9e-14  Score=123.63  Aligned_cols=213  Identities=13%  Similarity=0.013  Sum_probs=135.8

Q ss_pred             CCCCeEEEeCCCchHHHH--HHHHHHHCCCeEEEEecCCCCh------------hhHHHHHhhccCCCCeEEEECCCCCh
Q 043792           24 NATKTVCVMDASGHFASA--LVRRLLLRGYTVHAALHNHGKL------------QCIEEELINYNEEKKLKVFQADPFDY   89 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~--l~~~L~~~g~~V~~~~r~~~~~------------~~l~~~~~~~~~~~~v~~~~~Dl~~~   89 (294)
                      ..+|++|||||++.||..  +++.|.++|++|++++|+....            +.+.+.  ....+..+..+.+|++|.
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~Dvtd~  135 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEF--AKKKGLVAKNFIEDAFSN  135 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHH--HHHTTCCEEEEESCTTCH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHH--HHHcCCcEEEEEeeCCCH
Confidence            457899999999999999  9999999999999999975442            233321  122345688999999999


Q ss_pred             hHHHHHhc-------cCCEEEecCCCC-------------CCC-------------------------Ccch--hhhHhH
Q 043792           90 HSLVNALK-------GCSGLFYSFEPP-------------SDH-------------------------STYD--ELTAEV  122 (294)
Q Consensus        90 ~~~~~~~~-------~~d~Vih~a~~~-------------~~~-------------------------~~~~--~~~~~~  122 (294)
                      +++.++++       .+|++||||+..             ...                         ...+  +..+++
T Consensus       136 ~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~v  215 (418)
T 4eue_A          136 ETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKV  215 (418)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHH
Confidence            88877764       479999998863             000                         0111  155566


Q ss_pred             hhHHHH-HHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHH
Q 043792          123 ETMAAH-NVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWAL  198 (294)
Q Consensus       123 n~~~~~-~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~  198 (294)
                      |..+.. .+++++...   .+-.++|++||.++..... .                    .....|+.+|.+.+.+.+.+
T Consensus       216 n~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p-~--------------------~~~~aY~ASKaAL~~ltrsL  274 (418)
T 4eue_A          216 MGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYK-I--------------------YREGTIGIAKKDLEDKAKLI  274 (418)
T ss_dssp             HSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTT-T--------------------TTTSHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCC-c--------------------cccHHHHHHHHHHHHHHHHH
Confidence            655544 555554433   0124799999975322110 0                    00057999999999998888


Q ss_pred             HHh----cCCeEEEEecCceeCCCCCCCCccccccc---cccCCCccccccHHHHHHHHHhhhcCcCCCCeE
Q 043792          199 AMD----RGISMVSINGGLVMGPDVTISNPYLKGAA---EMYEDGVMASVDLRFYVDAHICVFEDVSSYGRY  263 (294)
Q Consensus       199 ~~~----~~~~~~ilrp~~i~G~~~~~~~~~~~~~~---~~~~~~~~~~v~v~D~a~~i~~~~~~~~~~~~~  263 (294)
                      +.+    .|+++.++.||.|-.+...    .+.+.+   ......-...-..+|+++++..++...-.+|.+
T Consensus       275 A~ELa~~~GIrVN~V~PG~v~T~~s~----~ip~~p~y~~~~~~~mk~~G~~E~v~e~~~~L~sd~~~~g~~  342 (418)
T 4eue_A          275 NEKLNRVIGGRAFVSVNKALVTKASA----YIPTFPLYAAILYKVMKEKNIHENCIMQIERMFSEKIYSNEK  342 (418)
T ss_dssp             HHHHHHHHSCEEEEEECCCCCCHHHH----TSTTHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHTTSSSSC
T ss_pred             HHHhCCccCeEEEEEECCcCcChhhh----cCCCCcHHHHHHHHHHhhcCChHHHHHHHHHHhhccccCCCc
Confidence            765    5899999999999654311    011100   000000000223588999999888765444444

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.46  E-value=2.8e-13  Score=98.28  Aligned_cols=94  Identities=19%  Similarity=0.210  Sum_probs=77.2

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      ++++|+|+|+ |++|+.+++.|++.| ++|++++|++++.+.+..        .++.++.+|+.+.+.+.++++++|+||
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~~~~~d~vi   74 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNR--------MGVATKQVDAKDEAGLAKALGGFDAVI   74 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHT--------TTCEEEECCTTCHHHHHHHTTTCSEEE
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHh--------CCCcEEEecCCCHHHHHHHHcCCCEEE
Confidence            4689999999 999999999999999 999999998755544432        368889999999999999999999999


Q ss_pred             ecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEE
Q 043792          104 YSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVV  144 (294)
Q Consensus       104 h~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v  144 (294)
                      |+++..                ...++++++.+. ++++|.
T Consensus        75 ~~~~~~----------------~~~~~~~~~~~~-g~~~~~   98 (118)
T 3ic5_A           75 SAAPFF----------------LTPIIAKAAKAA-GAHYFD   98 (118)
T ss_dssp             ECSCGG----------------GHHHHHHHHHHT-TCEEEC
T ss_pred             ECCCch----------------hhHHHHHHHHHh-CCCEEE
Confidence            998521                135788888888 875554

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=99.44  E-value=2.3e-13  Score=116.62  Aligned_cols=173  Identities=14%  Similarity=0.022  Sum_probs=118.0

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCC-------eEEEEecC----CCChhhHHHHHhhccCCCCeEEEECCCCChhHHH
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGY-------TVHAALHN----HGKLQCIEEELINYNEEKKLKVFQADPFDYHSLV   93 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~----~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~   93 (294)
                      +.|||+||||+||+|++++..|+.+|.       +|.+++++    .++.+....+  +......+   ..|+....++.
T Consensus         4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~d--l~~~~~~~---~~~i~~~~~~~   78 (329)
T 1b8p_A            4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMME--IDDCAFPL---LAGMTAHADPM   78 (329)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHH--HHTTTCTT---EEEEEEESSHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHH--Hhhhcccc---cCcEEEecCcH
Confidence            357999999999999999999999885       78888876    3222221111  11110011   13554445678


Q ss_pred             HHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCC-Cc-EEEEecCcceeeeCCCCCCCCCCCCCCCC-
Q 043792           94 NALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNT-VD-KVVFTSSLTAVVWNNHRDNPTSHDFDERN-  170 (294)
Q Consensus        94 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~-~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~-  170 (294)
                      ++++++|+|||+|+..........+.+..|+.++.++++++.+. + .+ +||++|......-.         ...+.. 
T Consensus        79 ~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~~p~a~ii~~SNPv~~~t~---------~~~~~~~  148 (329)
T 1b8p_A           79 TAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAV-ASRNIKVLVVGNPANTNAY---------IAMKSAP  148 (329)
T ss_dssp             HHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-SCTTCEEEECSSSHHHHHH---------HHHHTCT
T ss_pred             HHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-cCCCeEEEEccCchHHHHH---------HHHHHcC
Confidence            88999999999999877655556688999999999999999988 3 44 89988863200000         000000 


Q ss_pred             CCChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCC
Q 043792          171 WSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPD  218 (294)
Q Consensus       171 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~  218 (294)
                      -.++.      ..|+.+++...++...+++..|++...++...|+|.+
T Consensus       149 ~~p~~------~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~H  190 (329)
T 1b8p_A          149 SLPAK------NFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNH  190 (329)
T ss_dssp             TSCGG------GEEECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBCS
T ss_pred             CCCHH------HEEEeecHHHHHHHHHHHHHhCcCHHHceEEEEEecc
Confidence            00011      4588888888888888888888887777777788865

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.42  E-value=1.9e-12  Score=135.42  Aligned_cols=167  Identities=14%  Similarity=0.113  Sum_probs=120.5

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCe-EEEEecCCCChhh---HHHHHhhccCCCCeEEEECCCCChhHHHHHhc--
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYT-VHAALHNHGKLQC---IEEELINYNEEKKLKVFQADPFDYHSLVNALK--   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~---l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--   97 (294)
                      ..+++++||||+|.||+.+++.|+++|++ |++++|+..+.+.   ...+  ....+.++.++.+|++|.+++.++++  
T Consensus      1882 ~~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~--l~~~g~~v~~~~~Dvsd~~~v~~~~~~~ 1959 (2512)
T 2vz8_A         1882 PPHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVRE--WRRQGVQVLVSTSNASSLDGARSLITEA 1959 (2512)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHH--HHHTTCEEEEECCCSSSHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHH--HHhCCCEEEEEecCCCCHHHHHHHHHHH
Confidence            35789999999999999999999999997 7777887655422   2221  12234568889999999998887764  


Q ss_pred             ----cCCEEEecCCCCCCC------CcchhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 ----GCSGLFYSFEPPSDH------STYDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 ----~~d~Vih~a~~~~~~------~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                          .+|+|||+|+.....      ....+..+++|+.|+.++.+++... ....+||++||.++.. +..+    .   
T Consensus      1960 ~~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~-g~~g----~--- 2031 (2512)
T 2vz8_A         1960 TQLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGR-GNAG----Q--- 2031 (2512)
T ss_dssp             HHHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHT-TCTT----C---
T ss_pred             HhcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcC-CCCC----c---
Confidence                479999999874322      1112378999999999998887654 2346999999986433 2222    2   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeC
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMG  216 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G  216 (294)
                                     ..|+.+|...+.+.+.... .|++...+..+.+-+
T Consensus      2032 ---------------~~Y~aaKaal~~l~~~rr~-~Gl~~~a~~~g~~~~ 2065 (2512)
T 2vz8_A         2032 ---------------ANYGFANSAMERICEKRRH-DGLPGLAVQWGAIGD 2065 (2512)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHH-TTSCCCEEEECCBCT
T ss_pred             ---------------HHHHHHHHHHHHHHHHHHH-CCCcEEEEEccCcCC
Confidence                           6799999999999986554 489988888876643

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.41  E-value=1.4e-11  Score=129.05  Aligned_cols=227  Identities=16%  Similarity=0.087  Sum_probs=143.9

Q ss_pred             CCCCeEEEeCCCch-HHHHHHHHHHHCCCeEEEEecCCCC-----hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc
Q 043792           24 NATKTVCVMDASGH-FASALVRRLLLRGYTVHAALHNHGK-----LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK   97 (294)
Q Consensus        24 ~~~~~vlItGatG~-iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~   97 (294)
                      ..+|++|||||++. ||+.+++.|+++|++|++++|+.+.     .+.+..+  ....+.++..+.+|++|.+++.++++
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~--l~~~G~~~~~v~~Dvtd~~~v~~lv~ 2211 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRD--HARFDATLWVVPANMASYSDIDKLVE 2211 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHH--HCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHH--HhhcCCeEEEEEecCCCHHHHHHHHH
Confidence            56899999999999 9999999999999999999998766     3444432  22234467889999999998877743


Q ss_pred             -----------cCCEEEecCCCC----C-----C--CCcch----hhhHhHhhHHHHHHHHHHHhc---CCC---cEEEE
Q 043792           98 -----------GCSGLFYSFEPP----S-----D--HSTYD----ELTAEVETMAAHNVLEACAQT---NTV---DKVVF  145 (294)
Q Consensus        98 -----------~~d~Vih~a~~~----~-----~--~~~~~----~~~~~~n~~~~~~ll~~~~~~---~~~---~~~v~  145 (294)
                                 .+|++|||||..    .     .  .....    +..+++|+.++..+++++...   .+.   ..+|.
T Consensus      2212 ~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~ 2291 (3089)
T 3zen_D         2212 WVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVL 2291 (3089)
T ss_dssp             HHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEE
T ss_pred             HHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEE
Confidence                       369999999861    0     0  00111    134788999988888776543   121   12222


Q ss_pred             -ecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh--c--CCeEEEEecCceeCCCCC
Q 043792          146 -TSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD--R--GISMVSINGGLVMGPDVT  220 (294)
Q Consensus       146 -~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~--~--~~~~~ilrp~~i~G~~~~  220 (294)
                       .|+..    +...    .           .      ..|+.||.+.+.+.+.++.+  .  +++++.+.||.+-+....
T Consensus      2292 ~~ss~~----g~~g----~-----------~------~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~ 2346 (3089)
T 3zen_D         2292 PGSPNR----GMFG----G-----------D------GAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLM 2346 (3089)
T ss_dssp             EECSST----TSCS----S-----------C------SSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTT
T ss_pred             ECCccc----ccCC----C-----------c------hHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCccc
Confidence             22211    1000    0           0      56999999999999999888  3  589999999999754421


Q ss_pred             CCCccccccccccCCCccccccHHHHHHHHHhhhcCcCC---CCe--EE-eecc----cccHHHHHHHHH
Q 043792          221 ISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVSS---YGR--YL-CFNH----VINCNEDAMKLA  280 (294)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~v~v~D~a~~i~~~~~~~~~---~~~--~~-~~~~----~~s~~~~~~~~~  280 (294)
                      .............+   ......+|+|.+++.++.....   ++.  ++ +.++    ...+.++...+.
T Consensus      2347 ~~~~~~~~~~~~~~---~r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~~~~~~~~ 2413 (3089)
T 3zen_D         2347 GQNDAIVSAVEEAG---VTTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMAELAAKAR 2413 (3089)
T ss_dssp             TTTTTTHHHHGGGS---CBCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHHHHTHHHH
T ss_pred             ccchhHHHHHHhcC---CCCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHHHHHHHHH
Confidence            11111000000111   1133789999999998864321   222  22 2232    256777776543

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=99.35  E-value=7.2e-12  Score=107.04  Aligned_cols=118  Identities=13%  Similarity=0.078  Sum_probs=85.6

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~  101 (294)
                      .++|||+||||+|++|+.++..|+++|  ++|.+++++++ .....+   +........+ .+ +.+..++.++++++|+
T Consensus         6 ~~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~-~~~~~d---L~~~~~~~~v-~~-~~~t~d~~~al~gaDv   79 (326)
T 1smk_A            6 APGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA-PGVTAD---ISHMDTGAVV-RG-FLGQQQLEAALTGMDL   79 (326)
T ss_dssp             --CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH-HHHHHH---HHTSCSSCEE-EE-EESHHHHHHHHTTCSE
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc-HhHHHH---hhcccccceE-EE-EeCCCCHHHHcCCCCE
Confidence            345799999999999999999999998  88999887764 222211   1111111121 11 2334568888999999


Q ss_pred             EEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecC
Q 043792          102 LFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSS  148 (294)
Q Consensus       102 Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss  148 (294)
                      |||+++.+........++...|+.++.++++++.+. +.+.+|+++|
T Consensus        80 Vi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~-~p~~~viv~S  125 (326)
T 1smk_A           80 IIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKC-CPRAIVNLIS  125 (326)
T ss_dssp             EEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH-CTTSEEEECC
T ss_pred             EEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEEC
Confidence            999999776554444578999999999999999998 6677777776

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=99.19  E-value=9e-11  Score=99.76  Aligned_cols=171  Identities=13%  Similarity=0.129  Sum_probs=106.0

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCC--eEEEEec--CCCChhhHHHHHh-h-ccCCCCeEEEECCCCChhHHHHHhccCC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGY--TVHAALH--NHGKLQCIEEELI-N-YNEEKKLKVFQADPFDYHSLVNALKGCS  100 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~l~~~~~-~-~~~~~~v~~~~~Dl~~~~~~~~~~~~~d  100 (294)
                      |||+||||+||+|++++..|+.+|.  ++..+++  +.++.+....++. . ......+++...+    +++.++++++|
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~al~gaD   76 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRIIDESD   76 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGGGTTCS
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHHhCCCC
Confidence            5899999999999999999999884  5777776  4322221111110 1 0111123333211    12556789999


Q ss_pred             EEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhc
Q 043792          101 GLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKF  180 (294)
Q Consensus       101 ~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~  180 (294)
                      +|||+|+.+........+.+..|+.++.++++++++. + +++|+++|--+-.-   .    ....... ..++.     
T Consensus        77 ~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~-~~~vlv~SNPv~~~---t----~~~~k~~-~~p~~-----  141 (313)
T 1hye_A           77 VVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEI-C-DTKIFVITNPVDVM---T----YKALVDS-KFERN-----  141 (313)
T ss_dssp             EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-C-CCEEEECSSSHHHH---H----HHHHHHH-CCCTT-----
T ss_pred             EEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEEecCcHHHH---H----HHHHHhh-CcChh-----
Confidence            9999999876655555688999999999999999999 7 77777776311000   0    0000000 00011     


Q ss_pred             cchhHh-hHHHHHHHHHHHHHhcCCeEEEEecCceeCCC
Q 043792          181 KLWHGL-SKTLAEKTAWALAMDRGISMVSINGGLVMGPD  218 (294)
Q Consensus       181 ~~~Y~~-sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~  218 (294)
                       ..+|. +.+...++...+++..+++..-++. .++|.+
T Consensus       142 -rviG~gt~LD~~r~~~~la~~lgv~~~~v~~-~v~G~H  178 (313)
T 1hye_A          142 -QVFGLGTHLDSLRFKVAIAKFFGVHIDEVRT-RIIGEH  178 (313)
T ss_dssp             -SEEECTTHHHHHHHHHHHHHHHTCCGGGEEC-CEEECS
T ss_pred             -cEEEeCccHHHHHHHHHHHHHhCcCHHHeEE-EEeecc
Confidence             45777 6766777777777777776555554 566654

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=99.17  E-value=5.7e-11  Score=100.48  Aligned_cols=169  Identities=12%  Similarity=0.122  Sum_probs=103.0

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCC--eEEEEec--CCCChhhHHHHHh-hccCCCCeEEEECCCCChhHHHHHhccCCE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGY--TVHAALH--NHGKLQCIEEELI-NYNEEKKLKVFQADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~l~~~~~-~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~  101 (294)
                      |||+||||+|++|++++..|+.+|.  ++..+++  +.++.+....++. .......+++...   +    .++++++|+
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~---~----~~a~~~aDv   73 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQG---G----YEDTAGSDV   73 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEEC---C----GGGGTTCSE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeC---C----HHHhCCCCE
Confidence            6899999999999999999999875  5777777  4332222111110 1011233444432   2    335789999


Q ss_pred             EEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhcc
Q 043792          102 LFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFK  181 (294)
Q Consensus       102 Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  181 (294)
                      |||+|+.+........+.+..|+.++.++++++.+. +.+.+|+++|--+-.   ..    ........ .++.      
T Consensus        74 Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~p~~~viv~SNPv~~---~~----~~~~~~~~-~p~~------  138 (303)
T 1o6z_A           74 VVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYISLTTSNPVDL---LN----RHLYEAGD-RSRE------  138 (303)
T ss_dssp             EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT-CSCCEEEECCSSHHH---HH----HHHHHHSS-SCGG------
T ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEeCChHHH---HH----HHHHHHcC-CCHH------
Confidence            999999876655555688999999999999999999 777777777631000   00    00000000 0011      


Q ss_pred             chhHh-hHHHHHHHHHHHHHhcCCeEEEEecCceeCCC
Q 043792          182 LWHGL-SKTLAEKTAWALAMDRGISMVSINGGLVMGPD  218 (294)
Q Consensus       182 ~~Y~~-sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~  218 (294)
                      ...|. +-+..-++-...++..+++..-++ ..++|.+
T Consensus       139 rviG~gt~Ld~~r~~~~la~~l~v~~~~v~-~~v~G~H  175 (303)
T 1o6z_A          139 QVIGFGGRLDSARFRYVLSEEFDAPVQNVE-GTILGEH  175 (303)
T ss_dssp             GEEECCHHHHHHHHHHHHHHHHTCCGGGEE-CCEEECS
T ss_pred             HeeecccchhHHHHHHHHHHHhCcCHHHeE-EEEEeCC
Confidence            34555 444444555555556676555555 6777865

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=99.06  E-value=6.5e-10  Score=83.18  Aligned_cols=102  Identities=14%  Similarity=0.150  Sum_probs=73.5

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHH-hccCCEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNA-LKGCSGL  102 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~V  102 (294)
                      .++++|+|+|+ |.+|+.+++.|.+.|++|++++++++..+.+..        ....++.+|..+.+.+.++ +.++|+|
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~--------~~~~~~~~d~~~~~~l~~~~~~~~d~v   74 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS--------YATHAVIANATEENELLSLGIRNFEYV   74 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT--------TCSEEEECCTTCHHHHHTTTGGGCSEE
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------hCCEEEEeCCCCHHHHHhcCCCCCCEE
Confidence            34678999998 999999999999999999999987544332221        2456788999998888776 7789999


Q ss_pred             EecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792          103 FYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus       103 ih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      |++++..          .+.|.    .+.+.+++. +.+++|..++.
T Consensus        75 i~~~~~~----------~~~~~----~~~~~~~~~-~~~~ii~~~~~  106 (144)
T 2hmt_A           75 IVAIGAN----------IQAST----LTTLLLKEL-DIPNIWVKAQN  106 (144)
T ss_dssp             EECCCSC----------HHHHH----HHHHHHHHT-TCSEEEEECCS
T ss_pred             EECCCCc----------hHHHH----HHHHHHHHc-CCCeEEEEeCC
Confidence            9998742          12232    355566666 66777765553

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.05  E-value=1.4e-10  Score=97.44  Aligned_cols=83  Identities=20%  Similarity=0.121  Sum_probs=68.2

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      .++++++||||+|++|+++++.|+++|++|++++|+.++.+.+.+++..   ..++.++.+|+++.+++.++++++|+||
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~DvlV  193 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNK---RFKVNVTAAETADDASRAEAVKGAHFVF  193 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH---HHTCCCEEEECCSHHHHHHHTTTCSEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHh---cCCcEEEEecCCCHHHHHHHHHhCCEEE
Confidence            4568999999999999999999999999999999987666555543211   0146678899999999999999999999


Q ss_pred             ecCCCC
Q 043792          104 YSFEPP  109 (294)
Q Consensus       104 h~a~~~  109 (294)
                      |+++..
T Consensus       194 n~ag~g  199 (287)
T 1lu9_A          194 TAGAIG  199 (287)
T ss_dssp             ECCCTT
T ss_pred             ECCCcc
Confidence            999753

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=99.04  E-value=1.9e-09  Score=80.54  Aligned_cols=74  Identities=23%  Similarity=0.262  Sum_probs=62.7

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHH-hccCCEEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNA-LKGCSGLF  103 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~Vi  103 (294)
                      +|++|+|+|+ |.+|+++++.|.++|++|++++++++..+.+.+        .++.++.+|.++++.+.++ +.++|+||
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~--------~~~~~~~gd~~~~~~l~~~~~~~~d~vi   75 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED--------EGFDAVIADPTDESFYRSLDLEGVSAVL   75 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH--------TTCEEEECCTTCHHHHHHSCCTTCSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH--------CCCcEEECCCCCHHHHHhCCcccCCEEE
Confidence            4679999998 999999999999999999999998766655554        2678999999999988876 46789999


Q ss_pred             ecCC
Q 043792          104 YSFE  107 (294)
Q Consensus       104 h~a~  107 (294)
                      .+.+
T Consensus        76 ~~~~   79 (141)
T 3llv_A           76 ITGS   79 (141)
T ss_dssp             ECCS
T ss_pred             EecC
Confidence            8876

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.95  E-value=8.8e-10  Score=98.15  Aligned_cols=108  Identities=14%  Similarity=0.059  Sum_probs=78.2

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      ++++|+|+| +|++|+++++.|++.|++|++++|+.++.+.+..      ...++..+.+|+.|.+++.++++++|+|||
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~------~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn   74 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSA------GVQHSTPISLDVNDDAALDAEVAKHDLVIS   74 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTT------TCTTEEEEECCTTCHHHHHHHHTTSSEEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHH------hcCCceEEEeecCCHHHHHHHHcCCcEEEE
Confidence            357999998 6999999999999999999999998654433322      123477889999999999999999999999


Q ss_pred             cCCCCCCCCcchhhhHh--Hh-------hHHHHHHHHHHHhcCCCc
Q 043792          105 SFEPPSDHSTYDELTAE--VE-------TMAAHNVLEACAQTNTVD  141 (294)
Q Consensus       105 ~a~~~~~~~~~~~~~~~--~n-------~~~~~~ll~~~~~~~~~~  141 (294)
                      +++...... .....++  .|       ...+.++++++++. +++
T Consensus        75 ~a~~~~~~~-i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~a-Gv~  118 (450)
T 1ff9_A           75 LIPYTFHAT-VIKSAIRQKKHVVTTSYVSPAMMELDQAAKDA-GIT  118 (450)
T ss_dssp             CCC--CHHH-HHHHHHHHTCEEEESSCCCHHHHHTHHHHHHT-TCE
T ss_pred             CCccccchH-HHHHHHhCCCeEEEeecccHHHHHHHHHHHHC-CCe
Confidence            998643210 0111122  12       24678899999888 763

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.94  E-value=4.2e-09  Score=92.64  Aligned_cols=103  Identities=17%  Similarity=0.189  Sum_probs=78.1

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCC---CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc--CC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRG---YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG--CS  100 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d  100 (294)
                      |++|+|+|| |++|+.+++.|++.|   .+|.+.+|+.++.+.+.+.+.. ....++..+.+|++|.+++.+++++  +|
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~-~~~~~~~~~~~D~~d~~~l~~~l~~~~~D   78 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKA-KGYGEIDITTVDADSIEELVALINEVKPQ   78 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHH-TTCCCCEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhh-hcCCceEEEEecCCCHHHHHHHHHhhCCC
Confidence            479999999 999999999999998   3899999998777766653211 1123688999999999999999987  89


Q ss_pred             EEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecC
Q 043792          101 GLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSS  148 (294)
Q Consensus       101 ~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss  148 (294)
                      +|||++++..                ...++++|.+. ++ +++-+++
T Consensus        79 vVin~ag~~~----------------~~~v~~a~l~~-g~-~vvD~a~  108 (405)
T 4ina_A           79 IVLNIALPYQ----------------DLTIMEACLRT-GV-PYLDTAN  108 (405)
T ss_dssp             EEEECSCGGG----------------HHHHHHHHHHH-TC-CEEESSC
T ss_pred             EEEECCCccc----------------ChHHHHHHHHh-CC-CEEEecC
Confidence            9999987421                13567777777 65 4544433

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.93  E-value=3.1e-09  Score=92.35  Aligned_cols=95  Identities=18%  Similarity=0.212  Sum_probs=73.4

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      -++|||+|.|| |++|+.+++.|.+ .++|.+.+++.++.+.+.+         .+..+..|+.|.+++.++++++|+||
T Consensus        14 g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~---------~~~~~~~d~~d~~~l~~~~~~~DvVi   82 (365)
T 3abi_A           14 GRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKE---------FATPLKVDASNFDKLVEVMKEFELVI   82 (365)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTT---------TSEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhc---------cCCcEEEecCCHHHHHHHHhCCCEEE
Confidence            34578999998 9999999998865 5899999988655444332         67888999999999999999999999


Q ss_pred             ecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEec
Q 043792          104 YSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTS  147 (294)
Q Consensus       104 h~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~S  147 (294)
                      +++++..                ...++++|.+. ++ ++|=+|
T Consensus        83 ~~~p~~~----------------~~~v~~~~~~~-g~-~yvD~s  108 (365)
T 3abi_A           83 GALPGFL----------------GFKSIKAAIKS-KV-DMVDVS  108 (365)
T ss_dssp             ECCCGGG----------------HHHHHHHHHHH-TC-EEEECC
T ss_pred             EecCCcc----------------cchHHHHHHhc-Cc-ceEeee
Confidence            9987531                23577888877 64 666544

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.90  E-value=1.9e-08  Score=74.74  Aligned_cols=98  Identities=11%  Similarity=0.056  Sum_probs=70.9

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHH-hccCCEEEe
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNA-LKGCSGLFY  104 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~Vih  104 (294)
                      +|+|+|+|+ |++|+.+++.|.+.|++|++++|+++..+.+..   .    .++.++.+|..+.+.+.+. ++++|+||+
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~---~----~~~~~~~~d~~~~~~l~~~~~~~~d~vi~   75 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASA---E----IDALVINGDCTKIKTLEDAGIEDADMYIA   75 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---H----CSSEEEESCTTSHHHHHHTTTTTCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH---h----cCcEEEEcCCCCHHHHHHcCcccCCEEEE
Confidence            479999997 999999999999999999999997655544433   1    1567888999988877655 678999999


Q ss_pred             cCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEec
Q 043792          105 SFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTS  147 (294)
Q Consensus       105 ~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~S  147 (294)
                      +....           ..|.    .+.+.++.. +.+++|..+
T Consensus        76 ~~~~~-----------~~~~----~~~~~~~~~-~~~~ii~~~  102 (140)
T 1lss_A           76 VTGKE-----------EVNL----MSSLLAKSY-GINKTIARI  102 (140)
T ss_dssp             CCSCH-----------HHHH----HHHHHHHHT-TCCCEEEEC
T ss_pred             eeCCc-----------hHHH----HHHHHHHHc-CCCEEEEEe
Confidence            96531           1222    344555555 556776543

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.83  E-value=1.1e-07  Score=80.69  Aligned_cols=113  Identities=19%  Similarity=0.185  Sum_probs=81.5

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCCChhhHHHHHhhccCCC--CeEEEECCCCChhHHHHHhccCCEE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELINYNEEK--KLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~~~~~~~--~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      |||.|+||+|++|..++..|+..|  .+|.++++++  .+....+  +.....  +++...+    ..+++++++++|+|
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~d--L~~~~~~~~l~~~~~----t~d~~~a~~~aDvV   72 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAAD--LSHIETRATVKGYLG----PEQLPDCLKGCDVV   72 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHH--HTTSSSSCEEEEEES----GGGHHHHHTTCSEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHH--HhccCcCceEEEecC----CCCHHHHhCCCCEE
Confidence            589999999999999999999888  7899999886  2222221  211111  1221111    13577789999999


Q ss_pred             EecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCC-cEEEEecC
Q 043792          103 FYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTV-DKVVFTSS  148 (294)
Q Consensus       103 ih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~-~~~v~~Ss  148 (294)
                      |++++.+........+.+..|+.....+++.+.+. +. .++|++|-
T Consensus        73 vi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~sN  118 (314)
T 1mld_A           73 VIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQH-CPDAMICIISN  118 (314)
T ss_dssp             EECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEECSS
T ss_pred             EECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEECC
Confidence            99999877655555588899999999999999887 32 36777654

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=98.82  E-value=1.5e-08  Score=86.88  Aligned_cols=84  Identities=17%  Similarity=0.162  Sum_probs=64.1

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHH-HCCCeEEEEecCCCChh------------hHHHHHhhccCCCCeEEEECCCCChh
Q 043792           24 NATKTVCVMDASGHFASALVRRLL-LRGYTVHAALHNHGKLQ------------CIEEELINYNEEKKLKVFQADPFDYH   90 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~------------~l~~~~~~~~~~~~v~~~~~Dl~~~~   90 (294)
                      ...|++|||||++.+|.+.+..|+ ..|..|+++.+.....+            .+.++  ....+.....+.+|+.|++
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~--i~~~G~~a~~i~~Dv~d~e  125 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEA--AKREGLYSVTIDGDAFSDE  125 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHH--HHHHTCCEEEEESCTTSHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHH--HHHcCCCceeEeCCCCCHH
Confidence            346899999999999999999998 67999999988654321            11111  2234557889999999999


Q ss_pred             HHHHHhc-------cCCEEEecCCCC
Q 043792           91 SLVNALK-------GCSGLFYSFEPP  109 (294)
Q Consensus        91 ~~~~~~~-------~~d~Vih~a~~~  109 (294)
                      .+.++++       ++|++||+++..
T Consensus       126 ~i~~vi~~i~~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          126 IKAQVIEEAKKKGIKFDLIVYSLASP  151 (401)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred             HHHHHHHHHHHhcCCCCEEEEecccc
Confidence            8888775       479999997754

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.81  E-value=4.3e-09  Score=89.73  Aligned_cols=174  Identities=13%  Similarity=0.007  Sum_probs=104.4

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCC--e-----EEEEecCCC--ChhhHHHHHhhccC-CCCeEEEECCCCChhHHHHH
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGY--T-----VHAALHNHG--KLQCIEEELINYNE-EKKLKVFQADPFDYHSLVNA   95 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~--~-----V~~~~r~~~--~~~~l~~~~~~~~~-~~~v~~~~~Dl~~~~~~~~~   95 (294)
                      .+||+||||+|+||++++..|+..|.  +     +..+++.+.  ..+....+  +... .+-+.    ++.......+.
T Consensus         3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~D--L~~~~~~~~~----~~~~~~~~~~~   76 (333)
T 5mdh_A            3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLME--LQDCALPLLK----DVIATDKEEIA   76 (333)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHH--HHHTCCTTEE----EEEEESCHHHH
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhh--hHhhhhcccC----CEEEcCCcHHH
Confidence            37999999999999999999998774  4     777777542  22222211  1111 11121    12122345667


Q ss_pred             hccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCc--EEEEecCcceeeeCCCCCCCCCCCCCCCCCCC
Q 043792           96 LKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD--KVVFTSSLTAVVWNNHRDNPTSHDFDERNWSD  173 (294)
Q Consensus        96 ~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~--~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~  173 (294)
                      ++++|+|||+||.+......+.+.++.|+..+.++++++.+. +.+  +++.+|-.....-        . ...+.....
T Consensus        77 ~~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~-~~~~~~vivvsNPvd~~t--------~-~~~~~~~~~  146 (333)
T 5mdh_A           77 FKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKY-AKKSVKVIVVGNPANTNC--------L-TASKSAPSI  146 (333)
T ss_dssp             TTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHH-SCTTCEEEECSSSHHHHH--------H-HHHHTCTTS
T ss_pred             hCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEcCCchHHHH--------H-HHHHHcCCC
Confidence            889999999999876655566688999999999999999998 543  5777665210000        0 000100000


Q ss_pred             hhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCC
Q 043792          174 VNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVT  220 (294)
Q Consensus       174 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~  220 (294)
                      |.   +  ..-+.+-+..-++-...+++.+++..-++-..|+|.+..
T Consensus       147 p~---~--~ig~~t~LDs~R~~~~la~~l~v~~~~v~~~vV~GeHgd  188 (333)
T 5mdh_A          147 PK---E--NFSCLTRLDHNRAKAQIALKLGVTSDDVKNVIIWGNHSS  188 (333)
T ss_dssp             CG---G--GEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred             Cc---C--EEEEEEhHHHHHHHHHHHHHhCcCHHHeeecEEEEcCCC
Confidence            10   0  111244455555555566666776666665556787743

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.79  E-value=6.9e-08  Score=73.23  Aligned_cols=78  Identities=13%  Similarity=0.158  Sum_probs=62.2

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHH-hccCCE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNA-LKGCSG  101 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~  101 (294)
                      ...+++|+|+|+ |.+|+.+++.|.+.|++|++++|+++..+.+..       ..++.++.+|..+.+.+.++ +.++|+
T Consensus        16 ~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~-------~~g~~~~~~d~~~~~~l~~~~~~~ad~   87 (155)
T 2g1u_A           16 KQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS-------EFSGFTVVGDAAEFETLKECGMEKADM   87 (155)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT-------TCCSEEEESCTTSHHHHHTTTGGGCSE
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh-------cCCCcEEEecCCCHHHHHHcCcccCCE
Confidence            455789999997 999999999999999999999998766544320       12567888999888777765 678999


Q ss_pred             EEecCCC
Q 043792          102 LFYSFEP  108 (294)
Q Consensus       102 Vih~a~~  108 (294)
                      ||.+.+.
T Consensus        88 Vi~~~~~   94 (155)
T 2g1u_A           88 VFAFTND   94 (155)
T ss_dssp             EEECSSC
T ss_pred             EEEEeCC
Confidence            9999773

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.71  E-value=9.7e-08  Score=72.22  Aligned_cols=77  Identities=17%  Similarity=0.197  Sum_probs=62.4

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC-CChhhHHHHHhhccCCCCeEEEECCCCChhHHHHH-hccCCEEE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNH-GKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNA-LKGCSGLF  103 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~Vi  103 (294)
                      .++|+|+|+ |.+|+.+++.|.+.|++|+++++++ +..+.+...     ...++.++.+|.++++.+.++ ++++|.||
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~-----~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi   76 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQR-----LGDNADVIPGDSNDSSVLKKAGIDRCRAIL   76 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHH-----HCTTCEEEESCTTSHHHHHHHTTTTCSEEE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHh-----hcCCCeEEEcCCCCHHHHHHcChhhCCEEE
Confidence            468999997 9999999999999999999999974 333334331     123689999999999999887 88999999


Q ss_pred             ecCCC
Q 043792          104 YSFEP  108 (294)
Q Consensus       104 h~a~~  108 (294)
                      -+.+.
T Consensus        77 ~~~~~   81 (153)
T 1id1_A           77 ALSDN   81 (153)
T ss_dssp             ECSSC
T ss_pred             EecCC
Confidence            98763

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.65  E-value=7.5e-08  Score=82.25  Aligned_cols=172  Identities=13%  Similarity=0.019  Sum_probs=100.4

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCCChhhHHHHHh-hccCCCCeEEEECCCCChhHHHHHhccCC
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELI-NYNEEKKLKVFQADPFDYHSLVNALKGCS  100 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~-~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d  100 (294)
                      ++++||.|+|++|++|+.++..|+.+|  .+|.+++.+.++.+....++. ......++.       -..++.+.++++|
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~-------~t~d~~~al~dAD   78 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLT-------FTSDIKEALTDAK   78 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCE-------EESCHHHHHTTEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceE-------EcCCHHHHhCCCC
Confidence            456899999999999999999999998  589999987655443222111 110011121       1134667789999


Q ss_pred             EEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCc--EEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhh
Q 043792          101 GLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD--KVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCK  178 (294)
Q Consensus       101 ~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~--~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~  178 (294)
                      +||.++|.+......+.+.+..|+.....+.+.+.+. +.+  .++.+|-.....    .    ........ .++.   
T Consensus        79 vVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~-~p~a~~vlvvsNPvd~~----t----~i~~k~sg-~p~~---  145 (343)
T 3fi9_A           79 YIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSY-CPDCKHVIIIFNPADIT----G----LVTLIYSG-LKPS---  145 (343)
T ss_dssp             EEEECCC-------CHHHHHHHHHHHHHHHHHHHHHH-CTTCCEEEECSSSHHHH----H----HHHHHHHT-CCGG---
T ss_pred             EEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-ccCcEEEEEecCchHHH----H----HHHHHHcC-CCcc---
Confidence            9999999876655556688999999999999999888 432  355555321000    0    00000000 0000   


Q ss_pred             hccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCC
Q 043792          179 KFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPD  218 (294)
Q Consensus       179 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~  218 (294)
                         ...+.+-+..-++-...+++.+++..-++-..|+|.+
T Consensus       146 ---rv~g~t~LDs~R~~~~la~~l~v~~~~v~~~~ViGeH  182 (343)
T 3fi9_A          146 ---QVTTLAGLDSTRLQSELAKHFGIKQSLVTNTRTYGGH  182 (343)
T ss_dssp             ---GEEEECCHHHHHHHHHHHHHHTSCGGGEECCCEEESS
T ss_pred             ---eEEEecCcHHHHHHHHHHHHhCcCHHHcccceEEEcC
Confidence               1223344444455555666667766666645677776

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.63  E-value=1.9e-07  Score=74.79  Aligned_cols=76  Identities=16%  Similarity=0.230  Sum_probs=54.9

Q ss_pred             CCCeEEEeCC----------------CchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCC
Q 043792           25 ATKTVCVMDA----------------SGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFD   88 (294)
Q Consensus        25 ~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~   88 (294)
                      .+|+||||||                ||.+|.+++++|+++|++|+.++|......         ....++..+  |+.+
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~---------~~~~~~~~~--~v~s   70 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP---------EPHPNLSIR--EITN   70 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC---------CCCTTEEEE--ECCS
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc---------cCCCCeEEE--EHhH
Confidence            4789999999                999999999999999999999998753210         001245555  4445


Q ss_pred             hhHHH----HHhccCCEEEecCCCCCC
Q 043792           89 YHSLV----NALKGCSGLFYSFEPPSD  111 (294)
Q Consensus        89 ~~~~~----~~~~~~d~Vih~a~~~~~  111 (294)
                      .+++.    +.+.++|++||+|+....
T Consensus        71 ~~em~~~v~~~~~~~Dili~aAAvsD~   97 (232)
T 2gk4_A           71 TKDLLIEMQERVQDYQVLIHSMAVSDY   97 (232)
T ss_dssp             HHHHHHHHHHHGGGCSEEEECSBCCSE
T ss_pred             HHHHHHHHHHhcCCCCEEEEcCccccc
Confidence            44443    344579999999997653

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.61  E-value=2.4e-07  Score=68.99  Aligned_cols=75  Identities=12%  Similarity=0.151  Sum_probs=63.9

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHH-hccCCEEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNA-LKGCSGLF  103 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~Vi  103 (294)
                      .+++|+|.|+ |.+|+.+++.|.+.|++|++++++++..+.+..        .++.++.+|.++++.+.++ +.++|.||
T Consensus         6 ~~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~--------~g~~~i~gd~~~~~~l~~a~i~~ad~vi   76 (140)
T 3fwz_A            6 ICNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE--------RGVRAVLGNAANEEIMQLAHLECAKWLI   76 (140)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH--------TTCEEEESCTTSHHHHHHTTGGGCSEEE
T ss_pred             CCCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH--------cCCCEEECCCCCHHHHHhcCcccCCEEE
Confidence            3568999997 999999999999999999999999877666655        2788999999999988775 57899999


Q ss_pred             ecCCC
Q 043792          104 YSFEP  108 (294)
Q Consensus       104 h~a~~  108 (294)
                      -+...
T Consensus        77 ~~~~~   81 (140)
T 3fwz_A           77 LTIPN   81 (140)
T ss_dssp             ECCSC
T ss_pred             EECCC
Confidence            88763

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.60  E-value=6e-08  Score=86.56  Aligned_cols=79  Identities=16%  Similarity=0.159  Sum_probs=64.4

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHC-CCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLR-GYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~  101 (294)
                      ..++++|+|+|+ |++|+.+++.|++. |++|++++|+.++.+.+..   .    .++..+..|+.|.+++.++++++|+
T Consensus        20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~---~----~~~~~~~~D~~d~~~l~~~l~~~Dv   91 (467)
T 2axq_A           20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAK---P----SGSKAISLDVTDDSALDKVLADNDV   91 (467)
T ss_dssp             ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHG---G----GTCEEEECCTTCHHHHHHHHHTSSE
T ss_pred             CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHH---h----cCCcEEEEecCCHHHHHHHHcCCCE
Confidence            345789999998 99999999999998 7899999998766555543   1    2567788999999999999999999


Q ss_pred             EEecCCCC
Q 043792          102 LFYSFEPP  109 (294)
Q Consensus       102 Vih~a~~~  109 (294)
                      |||+++..
T Consensus        92 VIn~tp~~   99 (467)
T 2axq_A           92 VISLIPYT   99 (467)
T ss_dssp             EEECSCGG
T ss_pred             EEECCchh
Confidence            99998753

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.56  E-value=5.6e-07  Score=72.19  Aligned_cols=73  Identities=16%  Similarity=0.119  Sum_probs=62.3

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHH-hccCCEEEec
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNA-LKGCSGLFYS  105 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~Vih~  105 (294)
                      |+|+|+|+ |.+|+++++.|.++|++|++++++++..+.+..   .    .++.++.+|.++.+.+.++ ++++|.||-+
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~---~----~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~   72 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAK---K----LKATIIHGDGSHKEILRDAEVSKNDVVVIL   72 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH---H----SSSEEEESCTTSHHHHHHHTCCTTCEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH---H----cCCeEEEcCCCCHHHHHhcCcccCCEEEEe
Confidence            68999997 999999999999999999999998776665544   1    2678999999999999877 7789999977


Q ss_pred             CC
Q 043792          106 FE  107 (294)
Q Consensus       106 a~  107 (294)
                      .+
T Consensus        73 ~~   74 (218)
T 3l4b_C           73 TP   74 (218)
T ss_dssp             CS
T ss_pred             cC
Confidence            65

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.56  E-value=4.8e-07  Score=70.49  Aligned_cols=74  Identities=12%  Similarity=0.066  Sum_probs=62.4

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHC-CCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHH--hccCCE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLR-GYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNA--LKGCSG  101 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~--~~~~d~  101 (294)
                      .+++|+|+|+ |.+|+.+++.|.+. |++|+++++++++.+.+.+        .++.++.+|.++.+.+.++  ++++|.
T Consensus        38 ~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~--------~g~~~~~gd~~~~~~l~~~~~~~~ad~  108 (183)
T 3c85_A           38 GHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHRS--------EGRNVISGDATDPDFWERILDTGHVKL  108 (183)
T ss_dssp             TTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH--------TTCCEEECCTTCHHHHHTBCSCCCCCE
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH--------CCCCEEEcCCCCHHHHHhccCCCCCCE
Confidence            3578999996 99999999999999 9999999998766655544        2677889999998888877  778999


Q ss_pred             EEecCC
Q 043792          102 LFYSFE  107 (294)
Q Consensus       102 Vih~a~  107 (294)
                      ||.+.+
T Consensus       109 vi~~~~  114 (183)
T 3c85_A          109 VLLAMP  114 (183)
T ss_dssp             EEECCS
T ss_pred             EEEeCC
Confidence            998866

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.51  E-value=6.5e-07  Score=71.57  Aligned_cols=74  Identities=12%  Similarity=0.036  Sum_probs=55.4

Q ss_pred             CCCCeEEEeCC----------------CchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCC
Q 043792           24 NATKTVCVMDA----------------SGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPF   87 (294)
Q Consensus        24 ~~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~   87 (294)
                      ..+++||||||                ||.+|..+++.|+++|++|+++++.....        .   ..+++  ..|+.
T Consensus         6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l~--------~---~~g~~--~~dv~   72 (226)
T 1u7z_A            6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP--------T---PPFVK--RVDVM   72 (226)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC--------C---CTTEE--EEECC
T ss_pred             CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcccc--------c---CCCCe--EEccC
Confidence            45789999999                69999999999999999999988764210        1   11333  45777


Q ss_pred             ChhHHHHH----hccCCEEEecCCCCC
Q 043792           88 DYHSLVNA----LKGCSGLFYSFEPPS  110 (294)
Q Consensus        88 ~~~~~~~~----~~~~d~Vih~a~~~~  110 (294)
                      +.+++.+.    +.++|++||+|+...
T Consensus        73 ~~~~~~~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           73 TALEMEAAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             SHHHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred             cHHHHHHHHHHhcCCCCEEEECCcccC
Confidence            77665444    346899999998753

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=98.48  E-value=1.5e-06  Score=73.82  Aligned_cols=116  Identities=11%  Similarity=0.035  Sum_probs=82.1

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCC--eEEEEecCCCChhhHHHHHh-h-ccCCCCeEEEECCCCChhHHHHHhccC
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGY--TVHAALHNHGKLQCIEEELI-N-YNEEKKLKVFQADPFDYHSLVNALKGC   99 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~~~~~-~-~~~~~~v~~~~~Dl~~~~~~~~~~~~~   99 (294)
                      ..++||.|+|+ |.+|+.++..|+..|.  +|.++++++++.+....++. . ......+++...|.       +.++++
T Consensus         3 ~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~-------~a~~~a   74 (326)
T 3pqe_A            3 KHVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTY-------EDCKDA   74 (326)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECG-------GGGTTC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcH-------HHhCCC
Confidence            34689999997 9999999999999986  89999987665544222111 1 11112344443331       357899


Q ss_pred             CEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCc-EEEEecC
Q 043792          100 SGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD-KVVFTSS  148 (294)
Q Consensus       100 d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~v~~Ss  148 (294)
                      |+||.+++.+......+.+.+..|+.....+.+.+.+. +.. .++.+|-
T Consensus        75 DvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~-~p~a~vlvvtN  123 (326)
T 3pqe_A           75 DIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMAS-GFDGIFLVATN  123 (326)
T ss_dssp             SEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECSS
T ss_pred             CEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHh-cCCeEEEEcCC
Confidence            99999999876665666688999999999999999887 322 4555553

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.38  E-value=2.7e-07  Score=72.84  Aligned_cols=99  Identities=12%  Similarity=0.096  Sum_probs=65.1

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhH---HHHHhc--
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHS---LVNALK--   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~---~~~~~~--   97 (294)
                      ...+++|+|+||+|.||..+++.+...|.+|++++|++++.+.+.+   .     +... ..|..+.+.   +.+...  
T Consensus        36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~---~-----g~~~-~~d~~~~~~~~~~~~~~~~~  106 (198)
T 1pqw_A           36 LSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR---L-----GVEY-VGDSRSVDFADEILELTDGY  106 (198)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT---T-----CCSE-EEETTCSTHHHHHHHHTTTC
T ss_pred             CCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---c-----CCCE-EeeCCcHHHHHHHHHHhCCC
Confidence            3457899999999999999999999999999999987654433322   1     2221 235555432   333332  


Q ss_pred             cCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792           98 GCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      ++|+||++++.         .       .....++.++..   .++|.+++.
T Consensus       107 ~~D~vi~~~g~---------~-------~~~~~~~~l~~~---G~~v~~g~~  139 (198)
T 1pqw_A          107 GVDVVLNSLAG---------E-------AIQRGVQILAPG---GRFIELGKK  139 (198)
T ss_dssp             CEEEEEECCCT---------H-------HHHHHHHTEEEE---EEEEECSCG
T ss_pred             CCeEEEECCch---------H-------HHHHHHHHhccC---CEEEEEcCC
Confidence            48999999872         1       123344544444   489988875

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=98.34  E-value=1.9e-06  Score=72.84  Aligned_cols=114  Identities=13%  Similarity=0.108  Sum_probs=73.3

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhhc--cCCCCeEEEE-CCCCChhHHHHHhccCCE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINY--NEEKKLKVFQ-ADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~--~~~~~v~~~~-~Dl~~~~~~~~~~~~~d~  101 (294)
                      +|||.|+|| |.+|..++..|+..|+ +|.++++++++.+....++...  ......++.. .|      + +.++++|+
T Consensus         2 ~~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d------~-~a~~~aD~   73 (309)
T 1ur5_A            2 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNN------Y-ADTANSDV   73 (309)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC------G-GGGTTCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCC------H-HHHCCCCE
Confidence            479999999 9999999999999996 8888888876554322211000  0011222222 33      2 35789999


Q ss_pred             EEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecC
Q 043792          102 LFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSS  148 (294)
Q Consensus       102 Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss  148 (294)
                      ||.+++.+........+....|+.....+.+.+.+. +...+|.+.|
T Consensus        74 Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~vi~~t  119 (309)
T 1ur5_A           74 IVVTSGAPRKPGMSREDLIKVNADITRACISQAAPL-SPNAVIIMVN  119 (309)
T ss_dssp             EEECCCC--------CHHHHHHHHHHHHHHHHHGGG-CTTCEEEECC
T ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEcC
Confidence            999998766544444477888999999999999888 5444544443

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=98.32  E-value=2e-06  Score=72.88  Aligned_cols=115  Identities=10%  Similarity=0.131  Sum_probs=68.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCC--eEEEEecCCCChhhHHHHHhh-ccCCCCeEEEECCCCChhHHHHHhccCC
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGY--TVHAALHNHGKLQCIEEELIN-YNEEKKLKVFQADPFDYHSLVNALKGCS  100 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~~~~~~-~~~~~~v~~~~~Dl~~~~~~~~~~~~~d  100 (294)
                      ..++||.|+|+ |.+|+.++..|+..|.  ++.++++++++.+....++.- ......+.+...|   .    +.++++|
T Consensus         7 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~---~----~a~~~aD   78 (326)
T 3vku_A            7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE---Y----SDAKDAD   78 (326)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC---G----GGGTTCS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc---H----HHhcCCC
Confidence            45689999997 9999999999999886  899999876555433222111 1111234444333   2    3578999


Q ss_pred             EEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCC-cEEEEec
Q 043792          101 GLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTV-DKVVFTS  147 (294)
Q Consensus       101 ~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~-~~~v~~S  147 (294)
                      +||.+++.+......+.+.++.|+.....+.+.+.+. +. ..++.+|
T Consensus        79 iVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~-~p~a~ilvvt  125 (326)
T 3vku_A           79 LVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDS-GFNGIFLVAA  125 (326)
T ss_dssp             EEEECCCCC----------------CHHHHHHHHHTT-TCCSEEEECS
T ss_pred             EEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEcc
Confidence            9999999876555555688999999999999999887 32 2455554

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=98.26  E-value=2.6e-06  Score=69.06  Aligned_cols=72  Identities=14%  Similarity=0.179  Sum_probs=59.2

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHH-hccCCEEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNA-LKGCSGLF  103 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~Vi  103 (294)
                      ..++|+|+|+ |.+|+.+++.|.+.|+ |++++++++..+.+.         .++.++.+|.++++.+.++ ++++|.||
T Consensus         8 ~~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~---------~~~~~i~gd~~~~~~l~~a~i~~ad~vi   76 (234)
T 2aef_A            8 KSRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR---------SGANFVHGDPTRVSDLEKANVRGARAVI   76 (234)
T ss_dssp             --CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH---------TTCEEEESCTTCHHHHHHTTCTTCSEEE
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh---------cCCeEEEcCCCCHHHHHhcCcchhcEEE
Confidence            3578999998 9999999999999999 999988765443322         2689999999999999877 78999999


Q ss_pred             ecCC
Q 043792          104 YSFE  107 (294)
Q Consensus       104 h~a~  107 (294)
                      .+.+
T Consensus        77 ~~~~   80 (234)
T 2aef_A           77 VDLE   80 (234)
T ss_dssp             ECCS
T ss_pred             EcCC
Confidence            8765

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=98.25  E-value=1.3e-05  Score=67.59  Aligned_cols=173  Identities=13%  Similarity=0.027  Sum_probs=101.6

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHC-C--CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           27 KTVCVMDASGHFASALVRRLLLR-G--YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~-g--~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      |||.|+||+|.+|..++..|..+ +  .++..+++.+ ..+....+  +.......++... ..  ....+.++++|+||
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~D--l~~~~~~~~v~~~-~~--~~~~~~~~~aDivi   74 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVD--LSHIPTAVKIKGF-SG--EDATPALEGADVVL   74 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHH--HHTSCSSEEEEEE-CS--SCCHHHHTTCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHH--hhCCCCCceEEEe-cC--CCcHHHhCCCCEEE
Confidence            68999999999999999999875 4  5788888876 33322221  2222122232211 00  11234678999999


Q ss_pred             ecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCC-cEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccc
Q 043792          104 YSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTV-DKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL  182 (294)
Q Consensus       104 h~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~-~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  182 (294)
                      -+++.+......+.+.++.|......+.+.+.+. +. ..++.+|-.....-.-..    + ........++.      .
T Consensus        75 i~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~-~p~a~vlvvtNPvd~~t~~a~----~-~~k~sg~~p~~------r  142 (312)
T 3hhp_A           75 ISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKT-CPKACIGIITNPVNTTVAIAA----E-VLKKAGVYDKN------K  142 (312)
T ss_dssp             ECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECSSCHHHHHHHHH----H-HHHHTTCCCTT------S
T ss_pred             EeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEecCcchhHHHHHH----H-HHHHcCCCCcc------e
Confidence            9999887666677799999999999999999887 32 256655532100000000    0 00000000011      3


Q ss_pred             hhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCC
Q 043792          183 WHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPD  218 (294)
Q Consensus       183 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~  218 (294)
                      ..|......-++-...++..+++..-++ +.|+|.+
T Consensus       143 v~G~~~LD~~R~~~~la~~lgv~~~~v~-~~V~G~H  177 (312)
T 3hhp_A          143 LFGVTTLDIIRSNTFVAELKGKQPGEVE-VPVIGGH  177 (312)
T ss_dssp             EEECCHHHHHHHHHHHHHHHTCCGGGCC-CCEEECS
T ss_pred             EEEEechhHHHHHHHHHHHhCcChhHcc-eeEEecc
Confidence            4555533344555555566677666666 6678877

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=98.25  E-value=3e-05  Score=66.14  Aligned_cols=106  Identities=11%  Similarity=0.045  Sum_probs=74.0

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHh----hccCCCCeEEEECCCCChhHHHHHhcc
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELI----NYNEEKKLKVFQADPFDYHSLVNALKG   98 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~----~~~~~~~v~~~~~Dl~~~~~~~~~~~~   98 (294)
                      .++|||.|+|| |.+|..++..|+..|+ +|.+++++++..+.....+.    ......++.. .      .++.+.+++
T Consensus         7 ~~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t------~d~~ea~~~   78 (331)
T 1pzg_A            7 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-E------YSYEAALTG   78 (331)
T ss_dssp             SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-E------CSHHHHHTT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-e------CCHHHHhCC
Confidence            34579999998 9999999999999998 99999998766554221110    0011112221 1      235557899


Q ss_pred             CCEEEecCCCCCCCCc-----chhhhHhHhhHHHHHHHHHHHhc
Q 043792           99 CSGLFYSFEPPSDHST-----YDELTAEVETMAAHNVLEACAQT  137 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~~-----~~~~~~~~n~~~~~~ll~~~~~~  137 (294)
                      +|+||-+++.+.....     ...+....|+.....+++.+.+.
T Consensus        79 aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~  122 (331)
T 1pzg_A           79 ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKY  122 (331)
T ss_dssp             CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999987654433     34466788888899999988877

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=98.25  E-value=1.6e-07  Score=77.89  Aligned_cols=34  Identities=29%  Similarity=0.430  Sum_probs=28.2

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHH-CCCeEEEEec
Q 043792           25 ATKTVCVMDASGHFASALVRRLLL-RGYTVHAALH   58 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r   58 (294)
                      ++|||+|+|++|.+|+.+++.+.+ .++++.++.+
T Consensus         4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d   38 (273)
T 1dih_A            4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALE   38 (273)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEEC
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence            457999999999999999999886 4788875543

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=98.21  E-value=7.6e-06  Score=69.12  Aligned_cols=116  Identities=9%  Similarity=0.069  Sum_probs=79.4

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecC--CCChhhHHHHHhhc--cCCCCeEEEECCCCChhHHHHHhccC
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHN--HGKLQCIEEELINY--NEEKKLKVFQADPFDYHSLVNALKGC   99 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~--~~~~~~l~~~~~~~--~~~~~v~~~~~Dl~~~~~~~~~~~~~   99 (294)
                      +++||.|+|+ |.+|+.++..|+..|+ +|.+++++  ....+....++.-.  ......++...+  |.    +.++++
T Consensus         7 ~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~--d~----~a~~~a   79 (315)
T 3tl2_A            7 KRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTS--DY----ADTADS   79 (315)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEES--CG----GGGTTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcC--CH----HHhCCC
Confidence            4579999997 9999999999999999 99999988  33332221111000  000112222111  22    357899


Q ss_pred             CEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCc-EEEEecC
Q 043792          100 SGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD-KVVFTSS  148 (294)
Q Consensus       100 d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~v~~Ss  148 (294)
                      |+||-+++.+......+.+.+..|+.....+.+.+.+. +.. .++.+|.
T Consensus        80 DvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vlvvsN  128 (315)
T 3tl2_A           80 DVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKH-SPNAIIVVLTN  128 (315)
T ss_dssp             SEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECCS
T ss_pred             CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEECCC
Confidence            99999999877666666789999999999999999887 322 5665553

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=98.21  E-value=1.4e-06  Score=69.49  Aligned_cols=73  Identities=15%  Similarity=0.154  Sum_probs=52.3

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEecC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSF  106 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~a  106 (294)
                      |+|+|+||+|++|+.+++.|++.|++|++++|++++.+.+.+.+...     +.  ..|+. ..++.++++++|+||++.
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-----~~--~~~~~-~~~~~~~~~~~D~Vi~~~   72 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRI-----AG--DASIT-GMKNEDAAEACDIAVLTI   72 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHH-----HS--SCCEE-EEEHHHHHHHCSEEEECS
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccc-----cc--cCCCC-hhhHHHHHhcCCEEEEeC
Confidence            58999998999999999999999999999999876555544311000     00  01222 234666778899999997


Q ss_pred             C
Q 043792          107 E  107 (294)
Q Consensus       107 ~  107 (294)
                      .
T Consensus        73 ~   73 (212)
T 1jay_A           73 P   73 (212)
T ss_dssp             C
T ss_pred             C
Confidence            6

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=98.21  E-value=6.5e-06  Score=72.33  Aligned_cols=73  Identities=21%  Similarity=0.248  Sum_probs=64.3

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHH-hccCCEEEe
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNA-LKGCSGLFY  104 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~Vih  104 (294)
                      .++|+|+|. |.+|+.+++.|.+.|++|++++++++..+.+..   .     ++.++.+|.++++.+.++ ++++|+||-
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~---~-----g~~vi~GDat~~~~L~~agi~~A~~viv   74 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK---F-----GMKVFYGDATRMDLLESAGAAKAEVLIN   74 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH---T-----TCCCEESCTTCHHHHHHTTTTTCSEEEE
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh---C-----CCeEEEcCCCCHHHHHhcCCCccCEEEE
Confidence            468999997 999999999999999999999999877766665   2     788999999999999887 788999998


Q ss_pred             cCC
Q 043792          105 SFE  107 (294)
Q Consensus       105 ~a~  107 (294)
                      +..
T Consensus        75 ~~~   77 (413)
T 3l9w_A           75 AID   77 (413)
T ss_dssp             CCS
T ss_pred             CCC
Confidence            876

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=98.20  E-value=3.4e-05  Score=65.41  Aligned_cols=116  Identities=13%  Similarity=0.111  Sum_probs=77.8

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhhc--cCCCCeEEE-ECCCCChhHHHHHhccC
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINY--NEEKKLKVF-QADPFDYHSLVNALKGC   99 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~--~~~~~v~~~-~~Dl~~~~~~~~~~~~~   99 (294)
                      ++++||.|+|+ |.+|..++..|+..|+ +|.++++++++.+....++.-.  ......++. ..|   .    +.++++
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d---~----~a~~~a   76 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGAND---Y----AAIEGA   76 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESS---G----GGGTTC
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCC---H----HHHCCC
Confidence            34679999998 9999999999999998 9999999887654322211010  001122222 233   2    467899


Q ss_pred             CEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCc-EEEEecC
Q 043792          100 SGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD-KVVFTSS  148 (294)
Q Consensus       100 d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~v~~Ss  148 (294)
                      |+||.+++.+........+.+..|+.....+.+.+.+. +.. .++.+|-
T Consensus        77 DiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~iivvtN  125 (324)
T 3gvi_A           77 DVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKY-APEAFVICITN  125 (324)
T ss_dssp             SEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHH-CTTCEEEECCS
T ss_pred             CEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHH-CCCeEEEecCC
Confidence            99999999776555555578899999999999999888 322 5555553

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=98.18  E-value=2.8e-05  Score=64.99  Aligned_cols=114  Identities=12%  Similarity=0.035  Sum_probs=79.8

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCC--eEEEEecCCCChhhHHHHHh-hc-cCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGY--TVHAALHNHGKLQCIEEELI-NY-NEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~~~~~-~~-~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      |||.|+|+ |.+|..++..|+..|+  +|..++++++..+....++. .. ......++...  +|    .++++++|+|
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d----~~a~~~aDiV   73 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--AD----YSLLKGSEII   73 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SC----GGGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CC----HHHhCCCCEE
Confidence            68999999 9999999999999987  89999998765432111110 10 01122333322  12    3467899999


Q ss_pred             EecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCC-cEEEEecC
Q 043792          103 FYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTV-DKVVFTSS  148 (294)
Q Consensus       103 ih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~-~~~v~~Ss  148 (294)
                      |.+++.+......+.+.+..|+.....+.+.+.+. +. ..++.+|-
T Consensus        74 Viaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~iivvsN  119 (294)
T 1oju_A           74 VVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVVTN  119 (294)
T ss_dssp             EECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEECSS
T ss_pred             EECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEeCC
Confidence            99999877665666688999999999999999888 32 35665554

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=98.17  E-value=2.3e-05  Score=66.47  Aligned_cols=111  Identities=12%  Similarity=0.082  Sum_probs=71.9

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCC--eEEEEecCCCChhhHHHHHhhccC---CCCeEEEECCCCChhHHHHHhccC
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGY--TVHAALHNHGKLQCIEEELINYNE---EKKLKVFQADPFDYHSLVNALKGC   99 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~~~~~~~~~---~~~v~~~~~Dl~~~~~~~~~~~~~   99 (294)
                      +++||.|+|+ |.+|..++-.|+..|.  +|.+++.++++.+....+  +...   ...+++..   .+    .+.++++
T Consensus         6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~d--l~~~~~~~~~~~i~~---~~----~~a~~~a   75 (318)
T 1y6j_A            6 SRSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMD--INHGLPFMGQMSLYA---GD----YSDVKDC   75 (318)
T ss_dssp             -CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHH--HTTSCCCTTCEEEC-----C----GGGGTTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHH--HHHhHHhcCCeEEEE---CC----HHHhCCC
Confidence            3579999998 9999999999999987  899999987665433222  2111   11333322   22    2357899


Q ss_pred             CEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCc-EEEEe
Q 043792          100 SGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD-KVVFT  146 (294)
Q Consensus       100 d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~v~~  146 (294)
                      |+||.+++.+........+....|+.....+.+.+.+. +.. .++.+
T Consensus        76 DvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~  122 (318)
T 1y6j_A           76 DVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVV  122 (318)
T ss_dssp             SEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEEC
T ss_pred             CEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEEe
Confidence            99999999866544445577899999999999999887 322 44443

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=98.16  E-value=3.7e-05  Score=65.27  Aligned_cols=118  Identities=11%  Similarity=0.059  Sum_probs=82.3

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCC--eEEEEecCCCChhhHHHHHhhc-cCCCCeEEEECCCCChhHHHHHhccC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGY--TVHAALHNHGKLQCIEEELINY-NEEKKLKVFQADPFDYHSLVNALKGC   99 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~~~   99 (294)
                      ....+||.|+|+ |.+|..++..|+.+|.  ++..++++.++.+....++.-. .......++..+  |.+    .++++
T Consensus        16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~--d~~----~~~~a   88 (331)
T 4aj2_A           16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSK--DYS----VTANS   88 (331)
T ss_dssp             -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECS--SGG----GGTTE
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcC--CHH----HhCCC
Confidence            345689999998 9999999999999986  8999998765554432222111 011122233221  222    47899


Q ss_pred             CEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCC-cEEEEecC
Q 043792          100 SGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTV-DKVVFTSS  148 (294)
Q Consensus       100 d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~-~~~v~~Ss  148 (294)
                      |+||.++|.+......+.+.++.|+.....+.+.+.+. +. ..++.+|-
T Consensus        89 DiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~-~p~a~vlvvtN  137 (331)
T 4aj2_A           89 KLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKY-SPQCKLLIVSN  137 (331)
T ss_dssp             EEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECSS
T ss_pred             CEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecC
Confidence            99999999877666667799999999999999999888 32 25665553

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=98.15  E-value=3.8e-05  Score=65.06  Aligned_cols=114  Identities=17%  Similarity=0.175  Sum_probs=80.7

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhhc--cCCCCeEEE-ECCCCChhHHHHHhccCC
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINY--NEEKKLKVF-QADPFDYHSLVNALKGCS  100 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~--~~~~~v~~~-~~Dl~~~~~~~~~~~~~d  100 (294)
                      +++||.|+|+ |.+|..++..|+..|. +|.++++++++.+....++.-.  ......++. ..|   .    +.++++|
T Consensus         4 ~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d---~----~a~~~aD   75 (321)
T 3p7m_A            4 ARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTND---Y----KDLENSD   75 (321)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC---G----GGGTTCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCC---H----HHHCCCC
Confidence            4579999996 9999999999999887 9999999887654332221110  001122332 222   2    3678999


Q ss_pred             EEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCc-EEEEec
Q 043792          101 GLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD-KVVFTS  147 (294)
Q Consensus       101 ~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~v~~S  147 (294)
                      +||.+++.+........+.+..|+.....+.+.+.+. +.. .++.+|
T Consensus        76 vVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vivvt  122 (321)
T 3p7m_A           76 VVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHN-CPNAFVICIT  122 (321)
T ss_dssp             EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECC
T ss_pred             EEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHH-CCCcEEEEec
Confidence            9999999877666666688999999999999999888 432 555554

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.13  E-value=4.7e-06  Score=72.32  Aligned_cols=77  Identities=16%  Similarity=0.179  Sum_probs=59.8

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      ..+++|+|+|+ |.+|+.+++.|...|++|++++|++++.+.+.+   ..  ...   +.+|..+.+++.+.+.++|+||
T Consensus       164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~---~~--g~~---~~~~~~~~~~l~~~~~~~DvVi  234 (369)
T 2eez_A          164 VAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDD---VF--GGR---VITLTATEANIKKSVQHADLLI  234 (369)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HT--TTS---EEEEECCHHHHHHHHHHCSEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH---hc--Cce---EEEecCCHHHHHHHHhCCCEEE
Confidence            34689999999 999999999999999999999998765554433   11  112   3456677888888899999999


Q ss_pred             ecCCCC
Q 043792          104 YSFEPP  109 (294)
Q Consensus       104 h~a~~~  109 (294)
                      ++++..
T Consensus       235 ~~~g~~  240 (369)
T 2eez_A          235 GAVLVP  240 (369)
T ss_dssp             ECCC--
T ss_pred             ECCCCC
Confidence            998854

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=98.12  E-value=6.5e-05  Score=64.06  Aligned_cols=175  Identities=15%  Similarity=0.097  Sum_probs=108.6

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCC-------eEEEEecCCCCh--hhHHHHHhhccCCCCeEEEECCCCChhHHH
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGY-------TVHAALHNHGKL--QCIEEELINYNEEKKLKVFQADPFDYHSLV   93 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~--~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~   93 (294)
                      +++..||.|+||+|.||+.|+-.|.....       ++..++..+...  +.+..++.-.........+.++     +..
T Consensus        21 s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~-----~~~   95 (345)
T 4h7p_A           21 SMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTA-----DPR   95 (345)
T ss_dssp             -CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEES-----CHH
T ss_pred             CCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcC-----ChH
Confidence            33456999999999999999998887542       677777654321  2211111011111112222222     245


Q ss_pred             HHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcc---eeeeCCCCCCCCCCCCCC
Q 043792           94 NALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLT---AVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        94 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~---~~~~~~~~~~~~~~~~~e  168 (294)
                      +.++++|+||-+||.+......+.++++.|....+.+.+++.+.  +++ +++.+|-..   ++..           ...
T Consensus        96 ~a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~-~vlvvsNPvd~~~~i~-----------~~~  163 (345)
T 4h7p_A           96 VAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDC-RVVVVGNPANTNALIL-----------LKS  163 (345)
T ss_dssp             HHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTC-EEEECSSSHHHHHHHH-----------HHH
T ss_pred             HHhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCce-EEEEeCCCcchHHHHH-----------HHH
Confidence            67899999999999988877778899999999999999998875  222 455555421   0000           000


Q ss_pred             C-CCCChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCC
Q 043792          169 R-NWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVT  220 (294)
Q Consensus       169 ~-~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~  220 (294)
                      . ....+.      ...+.+.+..-++-...+++.+++..-++-..|+|.+..
T Consensus       164 ~~g~~~~r------~i~~~t~LDs~R~~~~la~~~~v~~~~V~~~~V~G~HG~  210 (345)
T 4h7p_A          164 AQGKLNPR------HVTAMTRLDHNRALSLLARKAGVPVSQVRNVIIWGNHSS  210 (345)
T ss_dssp             TTTCSCGG------GEEECCHHHHHHHHHHHHHHHTSCGGGEECCEEEBCSST
T ss_pred             ccCCCCcc------eeeeccchhHHHHHHHHHHHHCcChhheecceeecCCCC
Confidence            0 011111      445666677667767777777887777776677888743

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.12  E-value=6.6e-06  Score=70.76  Aligned_cols=76  Identities=22%  Similarity=0.170  Sum_probs=55.9

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----c
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----G   98 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----~   98 (294)
                      ..+++|||+||+|.+|..+++.+...|.+|++++|++++.+.+.+   .     +... ..|+.+.+++.+.++     +
T Consensus       168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~---~-----g~~~-~~d~~~~~~~~~~~~~~~~~~  238 (347)
T 2hcy_A          168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS---I-----GGEV-FIDFTKEKDIVGAVLKATDGG  238 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH---T-----TCCE-EEETTTCSCHHHHHHHHHTSC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH---c-----CCce-EEecCccHhHHHHHHHHhCCC
Confidence            457899999999999999999999999999999998776655444   2     2222 236654444444332     5


Q ss_pred             CCEEEecCCC
Q 043792           99 CSGLFYSFEP  108 (294)
Q Consensus        99 ~d~Vih~a~~  108 (294)
                      +|+||++++.
T Consensus       239 ~D~vi~~~g~  248 (347)
T 2hcy_A          239 AHGVINVSVS  248 (347)
T ss_dssp             EEEEEECSSC
T ss_pred             CCEEEECCCc
Confidence            8999999883

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=98.10  E-value=3.6e-05  Score=65.21  Aligned_cols=115  Identities=7%  Similarity=0.004  Sum_probs=77.9

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCCChhhHHHHHh--hccCCCCeEEEECCCCChhHHHHHhccC
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELI--NYNEEKKLKVFQADPFDYHSLVNALKGC   99 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~--~~~~~~~v~~~~~Dl~~~~~~~~~~~~~   99 (294)
                      ++++||.|+|| |.+|..++..|+.+|  .+|..+++++++.+.....+.  .......+++.. |  +    .++++++
T Consensus         4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~----~~a~~~a   75 (317)
T 3d0o_A            4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--E----YSDCHDA   75 (317)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--C----GGGGTTC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--C----HHHhCCC
Confidence            34579999999 999999999999888  488888887644432211110  111112334433 2  2    3357899


Q ss_pred             CEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCc-EEEEec
Q 043792          100 SGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD-KVVFTS  147 (294)
Q Consensus       100 d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~v~~S  147 (294)
                      |+||..++.+........+....|+.....+.+.+.+. +.. .++.+|
T Consensus        76 DvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~t  123 (317)
T 3d0o_A           76 DLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMAS-KFDGIFLVAT  123 (317)
T ss_dssp             SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECS
T ss_pred             CEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEec
Confidence            99999999876655555577889999999999998887 332 455443

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=98.09  E-value=4.5e-05  Score=64.34  Aligned_cols=114  Identities=12%  Similarity=0.092  Sum_probs=75.3

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCC--eEEEEecCCCChhhHHHHHhh--ccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGY--TVHAALHNHGKLQCIEEELIN--YNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~~~~~~--~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      |||.|+|+ |.+|+.++..|+..|.  +|.++++++++.+....++.-  .......++...|  +.    +.++++|+|
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~~----~a~~~aDvV   73 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--DY----GPTEDSDVC   73 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--SS----GGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--CH----HHhCCCCEE
Confidence            68999997 9999999999999886  899999988765432221110  0011233333222  22    357899999


Q ss_pred             EecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCC-cEEEEecC
Q 043792          103 FYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTV-DKVVFTSS  148 (294)
Q Consensus       103 ih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~-~~~v~~Ss  148 (294)
                      |.+++.+......+.+.+..|+.....+.+.+.+. +. ..++.+|-
T Consensus        74 ii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vivvtN  119 (314)
T 3nep_X           74 IITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEG-SPDSTIIVVAN  119 (314)
T ss_dssp             EECCCC-------CHHHHHHHHHHHHHHHHHHHTT-CTTCEEEECCS
T ss_pred             EECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEecCC
Confidence            99999876655556688999999999999999888 32 24555543

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.09  E-value=6.5e-06  Score=69.43  Aligned_cols=81  Identities=15%  Similarity=0.063  Sum_probs=60.0

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecC---CCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHN---HGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG   98 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~---~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~   98 (294)
                      ...+++++|+|+ |.+|+.++..|.+.|. +|+++.|+   .++.+.+.+++..   .....+...++.+.+++.+.+.+
T Consensus       151 ~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~---~~~~~~~~~~~~~~~~l~~~l~~  226 (315)
T 3tnl_A          151 DIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINS---KTDCKAQLFDIEDHEQLRKEIAE  226 (315)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHH---HSSCEEEEEETTCHHHHHHHHHT
T ss_pred             CccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhh---hcCCceEEeccchHHHHHhhhcC
Confidence            346789999998 8999999999999998 89999998   4455555443211   11233444566677778888889


Q ss_pred             CCEEEecCC
Q 043792           99 CSGLFYSFE  107 (294)
Q Consensus        99 ~d~Vih~a~  107 (294)
                      +|+||++-.
T Consensus       227 aDiIINaTp  235 (315)
T 3tnl_A          227 SVIFTNATG  235 (315)
T ss_dssp             CSEEEECSS
T ss_pred             CCEEEECcc
Confidence            999999943

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=98.06  E-value=5e-05  Score=64.32  Aligned_cols=107  Identities=13%  Similarity=0.145  Sum_probs=73.1

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCC--eEEEEecCCCChhhHHHHHh-h-ccCCCCeEEEECCCCChhHHHHHhcc
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGY--TVHAALHNHGKLQCIEEELI-N-YNEEKKLKVFQADPFDYHSLVNALKG   98 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~~~~~-~-~~~~~~v~~~~~Dl~~~~~~~~~~~~   98 (294)
                      +.+++||.|+|+ |.+|..++..|+..|.  +|.+++++++..+....++. . ......+++.. |  +.    +.+++
T Consensus         3 ~~~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~~----~al~~   74 (316)
T 1ldn_A            3 NNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--DY----DDCRD   74 (316)
T ss_dssp             TTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--CG----GGTTT
T ss_pred             CCCCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--cH----HHhCC
Confidence            345679999999 9999999999988774  89999988653332221110 1 01111344442 2  22    35789


Q ss_pred             CCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhc
Q 043792           99 CSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQT  137 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~  137 (294)
                      +|+||-+++..........+.+..|......+++.+.+.
T Consensus        75 aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~  113 (316)
T 1ldn_A           75 ADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMAS  113 (316)
T ss_dssp             CSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHH
Confidence            999999998876554444567788888888898888877

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=98.05  E-value=4.8e-06  Score=74.32  Aligned_cols=74  Identities=14%  Similarity=0.208  Sum_probs=63.2

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHH-hccCCEEEe
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNA-LKGCSGLFY  104 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~Vih  104 (294)
                      .|||+|.|+ |-+|++|++.|.++|++|++++++++..+.+.+.  +     .+..+.||-++++.|+++ ++++|.+|-
T Consensus         3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~--~-----~~~~i~Gd~~~~~~L~~Agi~~ad~~ia   74 (461)
T 4g65_A            3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDK--Y-----DLRVVNGHASHPDVLHEAGAQDADMLVA   74 (461)
T ss_dssp             CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHH--S-----SCEEEESCTTCHHHHHHHTTTTCSEEEE
T ss_pred             cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHh--c-----CcEEEEEcCCCHHHHHhcCCCcCCEEEE
Confidence            489999998 9999999999999999999999998777766652  1     678999999999999887 678999886


Q ss_pred             cCC
Q 043792          105 SFE  107 (294)
Q Consensus       105 ~a~  107 (294)
                      +-.
T Consensus        75 ~t~   77 (461)
T 4g65_A           75 VTN   77 (461)
T ss_dssp             CCS
T ss_pred             EcC
Confidence            533

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=98.04  E-value=7.8e-05  Score=63.09  Aligned_cols=116  Identities=9%  Similarity=-0.035  Sum_probs=81.0

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCC--eEEEEecCCCChhhHHHHHh-hccCCCCeEEE-ECCCCChhHHHHHhccC
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGY--TVHAALHNHGKLQCIEEELI-NYNEEKKLKVF-QADPFDYHSLVNALKGC   99 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~~~~~-~~~~~~~v~~~-~~Dl~~~~~~~~~~~~~   99 (294)
                      ...+||.|+|+ |.+|..++..|+..|.  +|.++++++++.+....++. .........+. ..|+.       .++++
T Consensus        19 ~~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~-------~~~da   90 (330)
T 3ldh_A           19 RSYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYS-------VSAGS   90 (330)
T ss_dssp             CCCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSC-------SCSSC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHH-------HhCCC
Confidence            35689999999 9999999999999986  89999987655443222111 10111122222 33432       26799


Q ss_pred             CEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCC-cEEEEecC
Q 043792          100 SGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTV-DKVVFTSS  148 (294)
Q Consensus       100 d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~-~~~v~~Ss  148 (294)
                      |+||-++|.+......+.+.+..|+.....+.+.+.+. +. ..++.+|-
T Consensus        91 DiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~-~P~a~ilvvtN  139 (330)
T 3ldh_A           91 KLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKH-SPDCLKELHPE  139 (330)
T ss_dssp             SEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHH-CTTCEEEECSS
T ss_pred             CEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-CCCceEEeCCC
Confidence            99999999887766666788999999999999998887 32 34555553

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=98.04  E-value=2.5e-05  Score=65.11  Aligned_cols=114  Identities=13%  Similarity=0.075  Sum_probs=79.2

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCCChhhHHHHHhh-c-cCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELIN-Y-NEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~~-~-~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      |||.|+|+ |.||+.++-.|+.++  .++..++.+++..+....++.- . .......+...+  |.+    .++++|+|
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~--d~~----~~~~aDvV   73 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DYS----LLKGSEII   73 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES--CGG----GGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC--CHH----HhCCCCEE
Confidence            78999996 999999999998876  4788888876444322221111 0 011122333221  222    47899999


Q ss_pred             EecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCc-EEEEecC
Q 043792          103 FYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD-KVVFTSS  148 (294)
Q Consensus       103 ih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~v~~Ss  148 (294)
                      |-.||.+......+.+.++.|..-.+.+.+.+.+. +.+ .++.+|-
T Consensus        74 vitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~-~p~aivlvvsN  119 (294)
T 2x0j_A           74 VVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVVTN  119 (294)
T ss_dssp             EECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEECSS
T ss_pred             EEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhc-CCceEEEEecC
Confidence            99999988877788899999999999999999888 433 3555543

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.03  E-value=7.6e-06  Score=69.96  Aligned_cols=76  Identities=13%  Similarity=0.074  Sum_probs=54.6

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChh---HHHHHhc--c
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYH---SLVNALK--G   98 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~---~~~~~~~--~   98 (294)
                      ..+++|+|+||+|.+|..+++.+...|++|++++|+.++.+.+.+   .     +.+. ..|..+.+   .+.+...  +
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~---~-----g~~~-~~d~~~~~~~~~i~~~~~~~~  214 (333)
T 1wly_A          144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK---L-----GCHH-TINYSTQDFAEVVREITGGKG  214 (333)
T ss_dssp             CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---H-----TCSE-EEETTTSCHHHHHHHHHTTCC
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---c-----CCCE-EEECCCHHHHHHHHHHhCCCC
Confidence            457899999999999999999999999999999998655555443   2     1211 12544433   3333332  5


Q ss_pred             CCEEEecCCC
Q 043792           99 CSGLFYSFEP  108 (294)
Q Consensus        99 ~d~Vih~a~~  108 (294)
                      +|+||++++.
T Consensus       215 ~d~vi~~~g~  224 (333)
T 1wly_A          215 VDVVYDSIGK  224 (333)
T ss_dssp             EEEEEECSCT
T ss_pred             CeEEEECCcH
Confidence            8999999985

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.03  E-value=6.8e-06  Score=70.23  Aligned_cols=76  Identities=24%  Similarity=0.232  Sum_probs=54.6

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ...+++|+|+||+|.||..+++.+...|++|++++++.++.+.+.+   .     +.. ...|..+.+++.+.+.     
T Consensus       143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~---~-----g~~-~~~d~~~~~~~~~~~~~~~~~  213 (333)
T 1v3u_A          143 VKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ---I-----GFD-AAFNYKTVNSLEEALKKASPD  213 (333)
T ss_dssp             CCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---T-----TCS-EEEETTSCSCHHHHHHHHCTT
T ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh---c-----CCc-EEEecCCHHHHHHHHHHHhCC
Confidence            3457899999999999999999999999999999987665555433   2     121 1236655333333332     


Q ss_pred             cCCEEEecCC
Q 043792           98 GCSGLFYSFE  107 (294)
Q Consensus        98 ~~d~Vih~a~  107 (294)
                      ++|+||++++
T Consensus       214 ~~d~vi~~~g  223 (333)
T 1v3u_A          214 GYDCYFDNVG  223 (333)
T ss_dssp             CEEEEEESSC
T ss_pred             CCeEEEECCC
Confidence            5899999998

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.96  E-value=7.5e-05  Score=63.23  Aligned_cols=113  Identities=7%  Similarity=0.051  Sum_probs=72.2

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCC--eEEEEecCCCChhhHHHHHhhc-cCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGY--TVHAALHNHGKLQCIEEELINY-NEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      .+||.|+|| |.+|..++-.|+..+.  ++..+++++++.+....++.-. .....+++.. |  +    .+.++++|+|
T Consensus         5 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDvV   76 (318)
T 1ez4_A            5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--E----YSDCKDADLV   76 (318)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--C----GGGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCCCEE
Confidence            479999999 9999999999998875  8999998765554322221110 0112344443 2  2    2357899999


Q ss_pred             EecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCC-cEEEEec
Q 043792          103 FYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTV-DKVVFTS  147 (294)
Q Consensus       103 ih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~-~~~v~~S  147 (294)
                      |..++.+........+.+..|+.....+.+.+.+. +. ..++.+|
T Consensus        77 ii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~t  121 (318)
T 1ez4_A           77 VITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDS-GFDGIFLVAA  121 (318)
T ss_dssp             EECCCC----------CHHHHHHHHHHHHHHHHHT-TCCSEEEECS
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEeC
Confidence            99998866544444577889999999999998888 32 3455543

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.96  E-value=1.6e-05  Score=68.27  Aligned_cols=98  Identities=15%  Similarity=0.082  Sum_probs=66.9

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChh---HHHHHhc--c
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYH---SLVNALK--G   98 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~---~~~~~~~--~   98 (294)
                      ..+++|||+||+|.+|..+++.+...|++|+++++++++.+.+.+   .     +.+.+ .|..+.+   .+.+...  +
T Consensus       165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~---~-----ga~~~-~d~~~~~~~~~~~~~~~~~~  235 (343)
T 2eih_A          165 RPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKA---L-----GADET-VNYTHPDWPKEVRRLTGGKG  235 (343)
T ss_dssp             CTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---H-----TCSEE-EETTSTTHHHHHHHHTTTTC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh---c-----CCCEE-EcCCcccHHHHHHHHhCCCC
Confidence            457899999999999999999999999999999998766555544   2     22211 3554432   3334332  5


Q ss_pred             CCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792           99 CSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      +|+||++++. ..               ....++.++..   .+++.+++.
T Consensus       236 ~d~vi~~~g~-~~---------------~~~~~~~l~~~---G~~v~~g~~  267 (343)
T 2eih_A          236 ADKVVDHTGA-LY---------------FEGVIKATANG---GRIAIAGAS  267 (343)
T ss_dssp             EEEEEESSCS-SS---------------HHHHHHHEEEE---EEEEESSCC
T ss_pred             ceEEEECCCH-HH---------------HHHHHHhhccC---CEEEEEecC
Confidence            8999999982 21               23445555544   388888764

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.96  E-value=8.1e-05  Score=63.23  Aligned_cols=115  Identities=10%  Similarity=0.094  Sum_probs=75.4

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCC--eEEEEecCCCChhhHHHHHhh-ccCCCCeEEEECCCCChhHHHHHhccCCE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGY--TVHAALHNHGKLQCIEEELIN-YNEEKKLKVFQADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~~~~~~-~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~  101 (294)
                      +++||.|+|| |.+|..++-.|+..+.  ++..++++.++.+....++.- ......+++.. |  +    .+.++++|+
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~----~~a~~~aDv   79 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--E----YSDAKDADL   79 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGGGGCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCCCE
Confidence            4579999999 9999999999988875  788889876554432221111 00112344443 2  2    234789999


Q ss_pred             EEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEec
Q 043792          102 LFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTS  147 (294)
Q Consensus       102 Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~S  147 (294)
                      ||..++.+........+.+..|+.....+.+.+.+...-..++.+|
T Consensus        80 Vii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  125 (326)
T 2zqz_A           80 VVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             EEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence            9999998765555555788899999999999888872113555554

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=97.94  E-value=1.3e-05  Score=68.63  Aligned_cols=96  Identities=15%  Similarity=0.105  Sum_probs=59.3

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCC------CeEEEEecCCCChhhHHHHHhhccC--C-CCeEEEECCCCChhHHHHHh
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRG------YTVHAALHNHGKLQCIEEELINYNE--E-KKLKVFQADPFDYHSLVNAL   96 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g------~~V~~~~r~~~~~~~l~~~~~~~~~--~-~~v~~~~~Dl~~~~~~~~~~   96 (294)
                      |+||+|.||||++|+.|++.|++++      .+++.+.++.+..+.+..   ....  . ..+.+.  |+ +.+    .+
T Consensus         9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~---~~~~l~~~~~~~~~--~~-~~~----~~   78 (352)
T 2nqt_A            9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGE---HHPHLTPLAHRVVE--PT-EAA----VL   78 (352)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGG---TCTTCGGGTTCBCE--EC-CHH----HH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhh---hcccccccceeeec--cC-CHH----Hh
Confidence            5799999999999999999999887      367777543322111111   0000  0 122222  22 222    35


Q ss_pred             ccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcc
Q 043792           97 KGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLT  150 (294)
Q Consensus        97 ~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~  150 (294)
                      .++|+||.|.+...                +..+++.+ +. ++ ++|-+|+..
T Consensus        79 ~~~DvVf~alg~~~----------------s~~~~~~~-~~-G~-~vIDlSa~~  113 (352)
T 2nqt_A           79 GGHDAVFLALPHGH----------------SAVLAQQL-SP-ET-LIIDCGADF  113 (352)
T ss_dssp             TTCSEEEECCTTSC----------------CHHHHHHS-CT-TS-EEEECSSTT
T ss_pred             cCCCEEEECCCCcc----------------hHHHHHHH-hC-CC-EEEEECCCc
Confidence            58999999977543                23466666 55 65 788888864

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=97.94  E-value=5.5e-05  Score=63.89  Aligned_cols=112  Identities=13%  Similarity=0.061  Sum_probs=75.5

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHC--CCeEEEEecCCCChhhHHHHHhhc--cCCCCeEEEE-CCCCChhHHHHHhccCCE
Q 043792           27 KTVCVMDASGHFASALVRRLLLR--GYTVHAALHNHGKLQCIEEELINY--NEEKKLKVFQ-ADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~l~~~~~~~--~~~~~v~~~~-~Dl~~~~~~~~~~~~~d~  101 (294)
                      |||.|+|+ |.+|..++..|.+.  |++|.++++++++.+.+..++...  ......++.. .|   .   .+ ++++|+
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d---~---~~-l~~aDv   72 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSND---Y---AD-TANSDI   72 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESC---G---GG-GTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCC---H---HH-HCCCCE
Confidence            58999998 99999999999985  799999999887665443211000  0011222222 23   2   22 679999


Q ss_pred             EEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCC-cEEEEec
Q 043792          102 LFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTV-DKVVFTS  147 (294)
Q Consensus       102 Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~-~~~v~~S  147 (294)
                      ||-+++.+........+++..|+.....+.+.+.+. .. ..++.+|
T Consensus        73 Viiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~~~~~viv~t  118 (310)
T 1guz_A           73 VIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKH-SKNPIIIVVS  118 (310)
T ss_dssp             EEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CSSCEEEECC
T ss_pred             EEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEEc
Confidence            999998765444444577888999999999988777 32 3455553

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.93  E-value=0.00012  Score=59.75  Aligned_cols=81  Identities=12%  Similarity=0.077  Sum_probs=56.9

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCC-------------------CChhhHHHHHhhccCCCCeEEEEC
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNH-------------------GKLQCIEEELINYNEEKKLKVFQA   84 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~-------------------~~~~~l~~~~~~~~~~~~v~~~~~   84 (294)
                      +.++|+|.|+ |.+|+++++.|...|. ++++++++.                   .+.+.+.+.+......-+++.+..
T Consensus        30 ~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~  108 (249)
T 1jw9_B           30 KDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNA  108 (249)
T ss_dssp             HHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred             hCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEec
Confidence            3579999997 8899999999999996 788888876                   344444332211111223555566


Q ss_pred             CCCChhHHHHHhccCCEEEecCC
Q 043792           85 DPFDYHSLVNALKGCSGLFYSFE  107 (294)
Q Consensus        85 Dl~~~~~~~~~~~~~d~Vih~a~  107 (294)
                      ++. .+.+.++++++|+||.+..
T Consensus       109 ~~~-~~~~~~~~~~~DvVi~~~d  130 (249)
T 1jw9_B          109 LLD-DAELAALIAEHDLVLDCTD  130 (249)
T ss_dssp             CCC-HHHHHHHHHTSSEEEECCS
T ss_pred             cCC-HhHHHHHHhCCCEEEEeCC
Confidence            664 4567778889999999864

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.93  E-value=1.1e-05  Score=68.69  Aligned_cols=98  Identities=10%  Similarity=-0.025  Sum_probs=65.2

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhH---HHHHhc--c
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHS---LVNALK--G   98 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~---~~~~~~--~   98 (294)
                      ..+++|+|+||+|.+|..+++.+...|++|+++++++++.+.+.+   .     +... ..|..+.+.   +.+...  +
T Consensus       139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~---~-----g~~~-~~~~~~~~~~~~~~~~~~~~~  209 (327)
T 1qor_A          139 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK---A-----GAWQ-VINYREEDLVERLKEITGGKK  209 (327)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH---H-----TCSE-EEETTTSCHHHHHHHHTTTCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---c-----CCCE-EEECCCccHHHHHHHHhCCCC
Confidence            457899999999999999999999999999999998655555444   2     1221 125444432   333332  5


Q ss_pred             CCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792           99 CSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      +|+||++++. .        .       ....++.++..   .+++.+++.
T Consensus       210 ~D~vi~~~g~-~--------~-------~~~~~~~l~~~---G~iv~~g~~  241 (327)
T 1qor_A          210 VRVVYDSVGR-D--------T-------WERSLDCLQRR---GLMVSFGNS  241 (327)
T ss_dssp             EEEEEECSCG-G--------G-------HHHHHHTEEEE---EEEEECCCT
T ss_pred             ceEEEECCch-H--------H-------HHHHHHHhcCC---CEEEEEecC
Confidence            8999999982 1        1       23344444444   488888764

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=97.92  E-value=1.3e-05  Score=71.28  Aligned_cols=82  Identities=12%  Similarity=0.076  Sum_probs=53.7

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeE-EE-----ECCCCChhHHHHHhccCC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLK-VF-----QADPFDYHSLVNALKGCS  100 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~-~~-----~~Dl~~~~~~~~~~~~~d  100 (294)
                      |||.|+|+ |++|..++..|++.|++|++++|++++.+.+.+.. .....+++. .+     .+.+.-..++.++++++|
T Consensus         3 mkI~VIG~-G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~-~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aD   80 (450)
T 3gg2_A            3 LDIAVVGI-GYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGT-IPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEAD   80 (450)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTC-SCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCC-CcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCC
Confidence            79999997 99999999999999999999999987766655410 000000000 00     001111123566778999


Q ss_pred             EEEecCCCCC
Q 043792          101 GLFYSFEPPS  110 (294)
Q Consensus       101 ~Vih~a~~~~  110 (294)
                      +||-+...+.
T Consensus        81 vViiaVptp~   90 (450)
T 3gg2_A           81 IIFIAVGTPA   90 (450)
T ss_dssp             EEEECCCCCB
T ss_pred             EEEEEcCCCc
Confidence            9999986653

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=97.88  E-value=3.4e-05  Score=66.44  Aligned_cols=97  Identities=14%  Similarity=0.167  Sum_probs=60.0

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCChhhHHHHHhhcc-CCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEEELINYN-EEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      ++||.|.||+|++|+.+++.|.+++ .++.++.+..+....+..   ... ....+   ..|+.-.+  .+.++++|+||
T Consensus        16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~---~~~~~~~~v---~~dl~~~~--~~~~~~vDvVf   87 (359)
T 1xyg_A           16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMES---VFPHLRAQK---LPTLVSVK--DADFSTVDAVF   87 (359)
T ss_dssp             CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHH---HCGGGTTSC---CCCCBCGG--GCCGGGCSEEE
T ss_pred             CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHH---hCchhcCcc---cccceecc--hhHhcCCCEEE
Confidence            4699999999999999999999876 478877654433223322   110 01111   12332222  33456899999


Q ss_pred             ecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792          104 YSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus       104 h~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      .|.+...                +......+ +. |+ ++|-+|+.
T Consensus        88 ~atp~~~----------------s~~~a~~~-~a-G~-~VId~sa~  114 (359)
T 1xyg_A           88 CCLPHGT----------------TQEIIKEL-PT-AL-KIVDLSAD  114 (359)
T ss_dssp             ECCCTTT----------------HHHHHHTS-CT-TC-EEEECSST
T ss_pred             EcCCchh----------------HHHHHHHH-hC-CC-EEEECCcc
Confidence            9976433                23455555 55 65 68888875

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=97.88  E-value=7.7e-05  Score=62.80  Aligned_cols=110  Identities=15%  Similarity=0.137  Sum_probs=68.5

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCC--eEEEEecCCCChhhHHHHHhhccCC---CCeEEEECCCCChhHHHHHhccCCE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGY--TVHAALHNHGKLQCIEEELINYNEE---KKLKVFQADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~~~~~~~~~~---~~v~~~~~Dl~~~~~~~~~~~~~d~  101 (294)
                      |||.|+|+ |.+|..++..|+..|+  +|.++++++++.+....+  .....   ...++...   +.    +.++++|+
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~--l~~~~~~~~~~~i~~~---~~----~a~~~aDv   70 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAED--IAHAAPVSHGTRVWHG---GH----SELADAQV   70 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHH--HTTSCCTTSCCEEEEE---CG----GGGTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHh--hhhhhhhcCCeEEEEC---CH----HHhCCCCE
Confidence            58999998 9999999999999998  999999986544332221  11111   12233221   22    35789999


Q ss_pred             EEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCc-EEEEec
Q 043792          102 LFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD-KVVFTS  147 (294)
Q Consensus       102 Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~v~~S  147 (294)
                      ||.+++.+........+.+..|+.....+++.+.+. +.. .++.+|
T Consensus        71 VIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~~t  116 (304)
T 2v6b_A           71 VILTAGANQKPGESRLDLLEKNADIFRELVPQITRA-APDAVLLVTS  116 (304)
T ss_dssp             EEECC------------CHHHHHHHHHHHHHHHHHH-CSSSEEEECS
T ss_pred             EEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEEec
Confidence            999997665443344467888999999999988876 333 454444

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=97.87  E-value=0.0003  Score=59.65  Aligned_cols=113  Identities=5%  Similarity=-0.002  Sum_probs=74.2

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhhc--cCCCCeEEEE-CCCCChhHHHHHhccCCE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINY--NEEKKLKVFQ-ADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~--~~~~~v~~~~-~Dl~~~~~~~~~~~~~d~  101 (294)
                      ++||.|+|| |.+|..++..|+..|+ +|.++++++++.+.....+...  ......++.. .|      + +.++++|+
T Consensus         4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d------~-~al~~aD~   75 (322)
T 1t2d_A            4 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNT------Y-DDLAGADV   75 (322)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECC------G-GGGTTCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCC------H-HHhCCCCE
Confidence            479999998 9999999999999998 8888888876654332211000  0011222222 23      2 35789999


Q ss_pred             EEecCCCCCCCCcc-----hhhhHhHhhHHHHHHHHHHHhcCCCc-EEEEec
Q 043792          102 LFYSFEPPSDHSTY-----DELTAEVETMAAHNVLEACAQTNTVD-KVVFTS  147 (294)
Q Consensus       102 Vih~a~~~~~~~~~-----~~~~~~~n~~~~~~ll~~~~~~~~~~-~~v~~S  147 (294)
                      ||-+++.+......     ..+....|+.....+.+.+.+. ... .+|.+|
T Consensus        76 Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~t  126 (322)
T 1t2d_A           76 VIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKN-CPNAFIIVVT  126 (322)
T ss_dssp             EEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEECS
T ss_pred             EEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEec
Confidence            99999876543322     3366778888888888888776 322 455444

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.86  E-value=1.8e-05  Score=68.16  Aligned_cols=75  Identities=13%  Similarity=0.083  Sum_probs=54.1

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChh---HHHHHhc--c
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYH---SLVNALK--G   98 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~---~~~~~~~--~   98 (294)
                      ..+++|+|+||+|.+|..+++.+...|++|+++++++++.+.+.+   .     +... ..|..+.+   .+.+...  +
T Consensus       169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~---~-----ga~~-~~d~~~~~~~~~~~~~~~~~~  239 (351)
T 1yb5_A          169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ---N-----GAHE-VFNHREVNYIDKIKKYVGEKG  239 (351)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---T-----TCSE-EEETTSTTHHHHHHHHHCTTC
T ss_pred             CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH---c-----CCCE-EEeCCCchHHHHHHHHcCCCC
Confidence            457899999999999999999999999999999998766554443   2     2221 13444433   3333333  5


Q ss_pred             CCEEEecCC
Q 043792           99 CSGLFYSFE  107 (294)
Q Consensus        99 ~d~Vih~a~  107 (294)
                      +|+||++++
T Consensus       240 ~D~vi~~~G  248 (351)
T 1yb5_A          240 IDIIIEMLA  248 (351)
T ss_dssp             EEEEEESCH
T ss_pred             cEEEEECCC
Confidence            899999988

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=97.86  E-value=0.00031  Score=59.73  Aligned_cols=113  Identities=14%  Similarity=0.085  Sum_probs=74.9

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHH----hhccCCCCeEEEECCCCChhHHHHHhccC
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEEL----INYNEEKKLKVFQADPFDYHSLVNALKGC   99 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~----~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~   99 (294)
                      +++||.|+|| |.+|..++..|+..|+ +|.+++++++..+.....+    .......++.. ..|      + +.++++
T Consensus        13 ~~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~-t~d------~-~al~~a   83 (328)
T 2hjr_A           13 MRKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFG-ENN------Y-EYLQNS   83 (328)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEE-ESC------G-GGGTTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEE-CCC------H-HHHCCC
Confidence            3469999998 9999999999999998 9999999877655322111    00001112222 123      2 357899


Q ss_pred             CEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCc-EEEEec
Q 043792          100 SGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD-KVVFTS  147 (294)
Q Consensus       100 d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~v~~S  147 (294)
                      |+||-+++.+........+....|+.....+++.+.+. ... .++..|
T Consensus        84 D~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~t  131 (328)
T 2hjr_A           84 DVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKY-CPNAFVICIT  131 (328)
T ss_dssp             SEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECC
T ss_pred             CEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHH-CCCeEEEEec
Confidence            99999998765433333466778888888888888776 322 444444

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.85  E-value=1.2e-05  Score=69.01  Aligned_cols=77  Identities=16%  Similarity=0.131  Sum_probs=53.5

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhH----HHHHh-c
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHS----LVNAL-K   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~----~~~~~-~   97 (294)
                      ...+++|||+||+|.+|..+++.+...|.+|++++++.++.+.+.++  +     +... ..|..+.++    +.+.. .
T Consensus       153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~--~-----g~~~-~~d~~~~~~~~~~~~~~~~~  224 (345)
T 2j3h_A          153 PKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTK--F-----GFDD-AFNYKEESDLTAALKRCFPN  224 (345)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT--S-----CCSE-EEETTSCSCSHHHHHHHCTT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH--c-----CCce-EEecCCHHHHHHHHHHHhCC
Confidence            34578999999999999999999999999999999887655554421  1     2221 125544322    33222 2


Q ss_pred             cCCEEEecCC
Q 043792           98 GCSGLFYSFE  107 (294)
Q Consensus        98 ~~d~Vih~a~  107 (294)
                      ++|+||++++
T Consensus       225 ~~d~vi~~~g  234 (345)
T 2j3h_A          225 GIDIYFENVG  234 (345)
T ss_dssp             CEEEEEESSC
T ss_pred             CCcEEEECCC
Confidence            5899999987

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.85  E-value=2e-05  Score=68.00  Aligned_cols=76  Identities=13%  Similarity=0.041  Sum_probs=54.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChh---HHHHHhc--c
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYH---SLVNALK--G   98 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~---~~~~~~~--~   98 (294)
                      ..+++|+|+||+|.+|..+++.+...|++|+++++++++.+.+.+   +     +.+. ..|..+.+   .+.+...  +
T Consensus       161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~---~-----g~~~-~~~~~~~~~~~~~~~~~~~~~  231 (354)
T 2j8z_A          161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEK---L-----GAAA-GFNYKKEDFSEATLKFTKGAG  231 (354)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---H-----TCSE-EEETTTSCHHHHHHHHTTTSC
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---c-----CCcE-EEecCChHHHHHHHHHhcCCC
Confidence            457899999999999999999999999999999998766555543   2     1221 23444433   3333332  5


Q ss_pred             CCEEEecCCC
Q 043792           99 CSGLFYSFEP  108 (294)
Q Consensus        99 ~d~Vih~a~~  108 (294)
                      +|+||++++.
T Consensus       232 ~d~vi~~~G~  241 (354)
T 2j8z_A          232 VNLILDCIGG  241 (354)
T ss_dssp             EEEEEESSCG
T ss_pred             ceEEEECCCc
Confidence            8999999984

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=97.83  E-value=4.9e-05  Score=65.01  Aligned_cols=71  Identities=14%  Similarity=0.172  Sum_probs=61.1

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHH-hccCCEEEe
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNA-LKGCSGLFY  104 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~Vih  104 (294)
                      .++|+|.|+ |.+|+.+++.|.++|+ |++++++++..+ +.+        .++.++.+|.+|++.++++ ++++|.||-
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~--------~~~~~i~gd~~~~~~L~~a~i~~a~~vi~  183 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR--------SGANFVHGDPTRVSDLEKANVRGARAVIV  183 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH--------TTCEEEESCTTSHHHHHHTCSTTEEEEEE
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh--------CCcEEEEeCCCCHHHHHhcChhhccEEEE
Confidence            468999997 9999999999999999 999998887666 544        3789999999999999887 788999998


Q ss_pred             cCC
Q 043792          105 SFE  107 (294)
Q Consensus       105 ~a~  107 (294)
                      +.+
T Consensus       184 ~~~  186 (336)
T 1lnq_A          184 DLE  186 (336)
T ss_dssp             CCS
T ss_pred             cCC
Confidence            764

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=97.79  E-value=5.6e-05  Score=64.09  Aligned_cols=114  Identities=11%  Similarity=0.071  Sum_probs=75.3

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhh----ccCCCCeEEEECCCCChhHHHHHhccCC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELIN----YNEEKKLKVFQADPFDYHSLVNALKGCS  100 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~----~~~~~~v~~~~~Dl~~~~~~~~~~~~~d  100 (294)
                      +|||.|+|+ |.+|+.++..|+..|+ +|++++++++..+.....+..    .....++.. ..|      + +.++++|
T Consensus         4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t~d------~-~a~~~aD   74 (317)
T 2ewd_A            4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIG-TDD------Y-ADISGSD   74 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESC------G-GGGTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEE-CCC------H-HHhCCCC
Confidence            479999998 9999999999999998 999999987665542111100    001112221 122      2 3568999


Q ss_pred             EEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecC
Q 043792          101 GLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSS  148 (294)
Q Consensus       101 ~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss  148 (294)
                      +||-+++.+........+....|......+++.+.+...-..++.+|.
T Consensus        75 iVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sN  122 (317)
T 2ewd_A           75 VVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITN  122 (317)
T ss_dssp             EEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             EEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence            999999876655554456667778778888888776612124555554

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=97.79  E-value=0.00031  Score=59.23  Aligned_cols=112  Identities=13%  Similarity=0.131  Sum_probs=78.1

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCCChhhHHHHHhhc-cCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELINY-NEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      |||.|+|| |.+|..++-.|+..+  .++..+++++++.+....++.-. .....+++.. +  +.    +.++++|+||
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~----~a~~~aD~Vi   72 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SY----GDLEGARAVV   72 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CG----GGGTTEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CH----HHhCCCCEEE
Confidence            68999998 999999999999887  68999998765544322221110 0012344443 2  22    3478999999


Q ss_pred             ecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCC-cEEEEec
Q 043792          104 YSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTV-DKVVFTS  147 (294)
Q Consensus       104 h~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~-~~~v~~S  147 (294)
                      ..++.+........+....|+.....+.+.+.+. +. ..++.+|
T Consensus        73 i~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~t  116 (310)
T 2xxj_A           73 LAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEA-APEAVLLVAT  116 (310)
T ss_dssp             ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECS
T ss_pred             ECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHH-CCCcEEEEec
Confidence            9999877655555678899999999999998887 32 3455554

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.78  E-value=9.4e-06  Score=60.47  Aligned_cols=71  Identities=13%  Similarity=0.186  Sum_probs=54.1

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEec
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYS  105 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~  105 (294)
                      +++|+|+|+ |.+|+.+++.|.+.|++|++++|++++.+.+.+++       +.....     .+++.+++.++|+||.+
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~-------~~~~~~-----~~~~~~~~~~~Divi~a   87 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY-------EYEYVL-----INDIDSLIKNNDVIITA   87 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH-------TCEEEE-----CSCHHHHHHTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh-------CCceEe-----ecCHHHHhcCCCEEEEe
Confidence            689999997 99999999999999999999999887766655521       222221     23456677899999999


Q ss_pred             CCCC
Q 043792          106 FEPP  109 (294)
Q Consensus       106 a~~~  109 (294)
                      .+..
T Consensus        88 t~~~   91 (144)
T 3oj0_A           88 TSSK   91 (144)
T ss_dssp             SCCS
T ss_pred             CCCC
Confidence            7654

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.76  E-value=6.5e-05  Score=62.48  Aligned_cols=78  Identities=15%  Similarity=0.236  Sum_probs=56.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ..+++++|+|+ |.+|+.++..|.+.|. +|++++|+.++.+.+.+++...  ...+.+...++   +++.+.+.++|+|
T Consensus       125 l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~--~~~~~i~~~~~---~~l~~~l~~~DiV  198 (283)
T 3jyo_A          125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNA--VGREAVVGVDA---RGIEDVIAAADGV  198 (283)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHH--HTSCCEEEECS---TTHHHHHHHSSEE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhh--cCCceEEEcCH---HHHHHHHhcCCEE
Confidence            45789999998 8999999999999998 7999999988777766533211  11223333333   3466677889999


Q ss_pred             EecCC
Q 043792          103 FYSFE  107 (294)
Q Consensus       103 ih~a~  107 (294)
                      |++-.
T Consensus       199 InaTp  203 (283)
T 3jyo_A          199 VNATP  203 (283)
T ss_dssp             EECSS
T ss_pred             EECCC
Confidence            99944

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.76  E-value=4.8e-05  Score=64.06  Aligned_cols=81  Identities=19%  Similarity=0.178  Sum_probs=56.6

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecC---CCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHN---HGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG   98 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~---~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~   98 (294)
                      ...+++++|+|+ |.+|+.++..|.+.|. +|+++.|+   .++.+.+.+++..   .....+...++.+.+.+.+.+.+
T Consensus       145 ~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~---~~~~~v~~~~~~~l~~~~~~l~~  220 (312)
T 3t4e_A          145 DMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNE---NTDCVVTVTDLADQHAFTEALAS  220 (312)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHH---HSSCEEEEEETTCHHHHHHHHHH
T ss_pred             CcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhh---ccCcceEEechHhhhhhHhhccC
Confidence            345789999998 8899999999999997 89999999   4445555543211   11233333455554445667788


Q ss_pred             CCEEEecCC
Q 043792           99 CSGLFYSFE  107 (294)
Q Consensus        99 ~d~Vih~a~  107 (294)
                      +|+||++-.
T Consensus       221 ~DiIINaTp  229 (312)
T 3t4e_A          221 ADILTNGTK  229 (312)
T ss_dssp             CSEEEECSS
T ss_pred             ceEEEECCc
Confidence            999999943

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.76  E-value=6.5e-05  Score=62.18  Aligned_cols=76  Identities=8%  Similarity=0.064  Sum_probs=53.8

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      ..+++++|+|+ |.+|+.++..|++.|.+|++++|+.++.+.+.+++.  . ...+.  ..|+   +++.+  .++|+||
T Consensus       117 l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~--~-~~~~~--~~~~---~~~~~--~~~DivV  185 (271)
T 1nyt_A          117 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFA--H-TGSIQ--ALSM---DELEG--HEFDLII  185 (271)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTG--G-GSSEE--ECCS---GGGTT--CCCSEEE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhh--c-cCCee--EecH---HHhcc--CCCCEEE
Confidence            35689999998 789999999999999999999998877666665321  1 11222  2333   22222  5799999


Q ss_pred             ecCCCCC
Q 043792          104 YSFEPPS  110 (294)
Q Consensus       104 h~a~~~~  110 (294)
                      ++++...
T Consensus       186 n~t~~~~  192 (271)
T 1nyt_A          186 NATSSGI  192 (271)
T ss_dssp             ECCSCGG
T ss_pred             ECCCCCC
Confidence            9987543

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=97.75  E-value=6.5e-05  Score=64.35  Aligned_cols=97  Identities=12%  Similarity=0.006  Sum_probs=58.4

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      |+||.|.||+|++|+.+++.|.+++ .+++++.+..+....+..   ......+..  ...+.+.+   + +.++|+||.
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~---~~~~~~g~~--~~~~~~~~---~-~~~vDvV~~   74 (345)
T 2ozp_A            4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHF---VHPNLRGRT--NLKFVPPE---K-LEPADILVL   74 (345)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGG---TCGGGTTTC--CCBCBCGG---G-CCCCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHH---hCchhcCcc--cccccchh---H-hcCCCEEEE
Confidence            5799999999999999999999876 477777664332222211   100000000  01122222   2 478999999


Q ss_pred             cCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792          105 SFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus       105 ~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      +.+...                +..+++.+.+. |+ ++|-+|+.
T Consensus        75 a~g~~~----------------s~~~a~~~~~a-G~-~VId~Sa~  101 (345)
T 2ozp_A           75 ALPHGV----------------FAREFDRYSAL-AP-VLVDLSAD  101 (345)
T ss_dssp             CCCTTH----------------HHHTHHHHHTT-CS-EEEECSST
T ss_pred             cCCcHH----------------HHHHHHHHHHC-CC-EEEEcCcc
Confidence            976432                33455555566 75 68888875

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.74  E-value=2.6e-05  Score=67.34  Aligned_cols=77  Identities=13%  Similarity=0.154  Sum_probs=57.8

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      +.++|+|+|+ |.+|+.+++.|...|.+|++++|++++.+.+.+   ...  ..+..+   ..+.+++.+.+.++|+||+
T Consensus       166 ~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~---~~~--~~~~~~---~~~~~~~~~~~~~~DvVI~  236 (361)
T 1pjc_A          166 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLET---LFG--SRVELL---YSNSAEIETAVAEADLLIG  236 (361)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HHG--GGSEEE---ECCHHHHHHHHHTCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH---hhC--ceeEee---eCCHHHHHHHHcCCCEEEE
Confidence            3589999999 999999999999999999999999877666654   211  122222   2345667777889999999


Q ss_pred             cCCCCC
Q 043792          105 SFEPPS  110 (294)
Q Consensus       105 ~a~~~~  110 (294)
                      +.+...
T Consensus       237 ~~~~~~  242 (361)
T 1pjc_A          237 AVLVPG  242 (361)
T ss_dssp             CCCCTT
T ss_pred             CCCcCC
Confidence            987543

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=97.73  E-value=0.0002  Score=60.40  Aligned_cols=104  Identities=12%  Similarity=0.104  Sum_probs=69.4

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCCChhhHHHHHh-h-ccCCCCeEEEECCCCChhHHHHHhccCCE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELI-N-YNEEKKLKVFQADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~-~-~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~  101 (294)
                      ||||.|+| +|.+|..++..|++.|  ++|++++|++++.+.+...+. . ......++....|   .    +.++++|+
T Consensus         1 m~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d---~----~~~~~aDv   72 (309)
T 1hyh_A            1 ARKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---W----AALADADV   72 (309)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---G----GGGTTCSE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCC---H----HHhCCCCE
Confidence            47999999 5999999999999999  899999998765555443211 0 0011123433333   2    35678999


Q ss_pred             EEecCCCCCC----CCcchhhhHhHhhHHHHHHHHHHHhc
Q 043792          102 LFYSFEPPSD----HSTYDELTAEVETMAAHNVLEACAQT  137 (294)
Q Consensus       102 Vih~a~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~  137 (294)
                      ||-+++....    ......+....|+.....+++.+.+.
T Consensus        73 Viiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~  112 (309)
T 1hyh_A           73 VISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKES  112 (309)
T ss_dssp             EEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHT
T ss_pred             EEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999886442    22223366778888888888888776

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.73  E-value=3.4e-05  Score=65.98  Aligned_cols=77  Identities=21%  Similarity=0.169  Sum_probs=53.8

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChh---HHHHHh-cc
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYH---SLVNAL-KG   98 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~---~~~~~~-~~   98 (294)
                      ...+++|||+||+|.+|..+++.+...|.+|+++++++++.+.+..+  +     +... ..|..+.+   .+.+.. .+
T Consensus       147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~--~-----g~~~-~~~~~~~~~~~~~~~~~~~~  218 (336)
T 4b7c_A          147 PKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEE--L-----GFDG-AIDYKNEDLAAGLKRECPKG  218 (336)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT--T-----CCSE-EEETTTSCHHHHHHHHCTTC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH--c-----CCCE-EEECCCHHHHHHHHHhcCCC
Confidence            34678999999999999999999999999999999987666555221  2     2221 12444433   222222 25


Q ss_pred             CCEEEecCC
Q 043792           99 CSGLFYSFE  107 (294)
Q Consensus        99 ~d~Vih~a~  107 (294)
                      +|+||++++
T Consensus       219 ~d~vi~~~g  227 (336)
T 4b7c_A          219 IDVFFDNVG  227 (336)
T ss_dssp             EEEEEESSC
T ss_pred             ceEEEECCC
Confidence            899999998

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=97.72  E-value=0.0012  Score=56.69  Aligned_cols=175  Identities=10%  Similarity=0.040  Sum_probs=101.4

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCC-----eEEEEecCCCCh----hhHHHHHhhccCC-CCeEEEECCCCChhHHHH
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGY-----TVHAALHNHGKL----QCIEEELINYNEE-KKLKVFQADPFDYHSLVN   94 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~-----~V~~~~r~~~~~----~~l~~~~~~~~~~-~~v~~~~~Dl~~~~~~~~   94 (294)
                      ..+||.|+||+|.||.+++-.|+..+.     .+...+.+.+..    +....+  +.... +-...+..  .+  ...+
T Consensus        31 ~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amD--L~h~~~p~~~~v~i--~~--~~y~  104 (375)
T 7mdh_A           31 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAME--LEDSLYPLLREVSI--GI--DPYE  104 (375)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHH--HHTTTCTTEEEEEE--ES--CHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHh--HHhhhhhhcCCcEE--ec--CCHH
Confidence            457999999999999999999998762     255544444332    211111  21111 11111111  11  2355


Q ss_pred             HhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCC
Q 043792           95 ALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSD  173 (294)
Q Consensus        95 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~  173 (294)
                      .++++|+||-.|+.+......+.+.++.|......+.+++.+. ..-..++.+|...-..    .    ...........
T Consensus       105 ~~~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPvD~~----t----~ia~k~sg~~~  176 (375)
T 7mdh_A          105 VFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPCNTN----A----LICLKNAPDIP  176 (375)
T ss_dssp             HTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHH----H----HHHHHTCTTSC
T ss_pred             HhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCchhHH----H----HHHHHHcCCCC
Confidence            7889999999999877666677799999999999999998874 1223566666421000    0    00000000000


Q ss_pred             hhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCC
Q 043792          174 VNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDV  219 (294)
Q Consensus       174 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~  219 (294)
                      +.      ..-+.+.+..-++-...+++.+++..-++-..|+|.+.
T Consensus       177 ~r------vig~gT~LDsaR~r~~lA~~lgv~~~~V~~v~V~GeHg  216 (375)
T 7mdh_A          177 AK------NFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHS  216 (375)
T ss_dssp             GG------GEEECCHHHHHHHHHHHHHHTTSCGGGEECCEEEBCSS
T ss_pred             cc------EEEeeehHHHHHHHHHHHHHhCcChhhcccceEEecCC
Confidence            00      23344555556666666667777665555446788774

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.71  E-value=3.7e-05  Score=61.35  Aligned_cols=67  Identities=21%  Similarity=0.238  Sum_probs=49.2

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      ++|+|.|+| +|.+|+.+++.|.+.|++|++++|++++.+.+.+        .++...        ++.++++++|+||.
T Consensus        27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~--------~g~~~~--------~~~~~~~~~DvVi~   89 (215)
T 2vns_A           27 EAPKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARLFP--------SAAQVT--------FQEEAVSSPEVIFV   89 (215)
T ss_dssp             --CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSB--------TTSEEE--------EHHHHTTSCSEEEE
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------cCCcee--------cHHHHHhCCCEEEE
Confidence            457899999 6999999999999999999999988654333221        133331        35567789999998


Q ss_pred             cCCC
Q 043792          105 SFEP  108 (294)
Q Consensus       105 ~a~~  108 (294)
                      +...
T Consensus        90 av~~   93 (215)
T 2vns_A           90 AVFR   93 (215)
T ss_dssp             CSCG
T ss_pred             CCCh
Confidence            8764

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.70  E-value=4.2e-05  Score=66.11  Aligned_cols=98  Identities=12%  Similarity=0.040  Sum_probs=65.1

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCCh---hHHHHHh-ccC
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDY---HSLVNAL-KGC   99 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~---~~~~~~~-~~~   99 (294)
                      ..+.+|||+||+|.+|..+++.+...|.+|+++++++++.+.+++   +     +.+.+ .|..+.   +.+.+.. .++
T Consensus       162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~---~-----Ga~~~-~~~~~~~~~~~~~~~~~~g~  232 (362)
T 2c0c_A          162 SEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS---L-----GCDRP-INYKTEPVGTVLKQEYPEGV  232 (362)
T ss_dssp             CTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---T-----TCSEE-EETTTSCHHHHHHHHCTTCE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH---c-----CCcEE-EecCChhHHHHHHHhcCCCC
Confidence            457899999999999999999999999999999988665555544   2     22211 133222   2222222 258


Q ss_pred             CEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792          100 SGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus       100 d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      |+||++++..                .....+++++..   .++|.+++.
T Consensus       233 D~vid~~g~~----------------~~~~~~~~l~~~---G~iv~~g~~  263 (362)
T 2c0c_A          233 DVVYESVGGA----------------MFDLAVDALATK---GRLIVIGFI  263 (362)
T ss_dssp             EEEEECSCTH----------------HHHHHHHHEEEE---EEEEECCCG
T ss_pred             CEEEECCCHH----------------HHHHHHHHHhcC---CEEEEEeCC
Confidence            9999998830                123455555554   488888764

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=97.70  E-value=0.00015  Score=63.88  Aligned_cols=81  Identities=11%  Similarity=0.044  Sum_probs=58.0

Q ss_pred             cccCccCCCCCCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHH
Q 043792           13 IAVDRDGYDSSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSL   92 (294)
Q Consensus        13 ~~~~~~~~~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~   92 (294)
                      |......++...++++|+|+|+ |.+|+.+++.+.+.|++|++++.++......     .     .-..+..|+.|.+.+
T Consensus        22 ~~~~~~~~~~~~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~-----~-----ad~~~~~~~~d~~~l   90 (419)
T 4e4t_A           22 MTATPDSVSPILPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPAGA-----V-----ADRHLRAAYDDEAAL   90 (419)
T ss_dssp             -------CCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHHHH-----H-----SSEEECCCTTCHHHH
T ss_pred             hccCccccccCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCchhh-----h-----CCEEEECCcCCHHHH
Confidence            4333333333456789999997 8999999999999999999998765543221     1     124667899999999


Q ss_pred             HHHhccCCEEEe
Q 043792           93 VNALKGCSGLFY  104 (294)
Q Consensus        93 ~~~~~~~d~Vih  104 (294)
                      .++.+++|+|+.
T Consensus        91 ~~~a~~~D~V~~  102 (419)
T 4e4t_A           91 AELAGLCEAVST  102 (419)
T ss_dssp             HHHHHHCSEEEE
T ss_pred             HHHHhcCCEEEE
Confidence            999999999984

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.70  E-value=4.8e-05  Score=63.51  Aligned_cols=67  Identities=12%  Similarity=0.109  Sum_probs=50.5

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      +||+|.|+|+||.+|+.+++.|.+.|++|++++|+++..+.+.+   .     ++     +..+   ..+.++++|+||-
T Consensus        10 mmm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~---~-----g~-----~~~~---~~~~~~~aDvVi~   73 (286)
T 3c24_A           10 GPKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG---M-----GI-----PLTD---GDGWIDEADVVVL   73 (286)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH---T-----TC-----CCCC---SSGGGGTCSEEEE
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh---c-----CC-----CcCC---HHHHhcCCCEEEE
Confidence            35799999999999999999999999999999988665554443   1     22     1122   2345678999998


Q ss_pred             cCC
Q 043792          105 SFE  107 (294)
Q Consensus       105 ~a~  107 (294)
                      +..
T Consensus        74 av~   76 (286)
T 3c24_A           74 ALP   76 (286)
T ss_dssp             CSC
T ss_pred             cCC
Confidence            875

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.69  E-value=6.9e-05  Score=64.62  Aligned_cols=76  Identities=20%  Similarity=0.113  Sum_probs=52.8

Q ss_pred             CCC--CeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChh---HHHHHhc
Q 043792           24 NAT--KTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYH---SLVNALK   97 (294)
Q Consensus        24 ~~~--~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~---~~~~~~~   97 (294)
                      ..+  ++|||+||+|.||..+++.+...|+ +|++++++.++.+.+.++  +     +.. ...|..+.+   .+.+...
T Consensus       157 ~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~--~-----g~~-~~~d~~~~~~~~~~~~~~~  228 (357)
T 2zb4_A          157 TAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE--L-----GFD-AAINYKKDNVAEQLRESCP  228 (357)
T ss_dssp             CTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT--S-----CCS-EEEETTTSCHHHHHHHHCT
T ss_pred             CCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH--c-----CCc-eEEecCchHHHHHHHHhcC
Confidence            346  8999999999999999999999999 999999886554444331  1     111 123554432   2333222


Q ss_pred             -cCCEEEecCC
Q 043792           98 -GCSGLFYSFE  107 (294)
Q Consensus        98 -~~d~Vih~a~  107 (294)
                       ++|+||++++
T Consensus       229 ~~~d~vi~~~G  239 (357)
T 2zb4_A          229 AGVDVYFDNVG  239 (357)
T ss_dssp             TCEEEEEESCC
T ss_pred             CCCCEEEECCC
Confidence             5899999998

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.69  E-value=9.2e-05  Score=62.08  Aligned_cols=77  Identities=17%  Similarity=0.080  Sum_probs=56.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ..+++|+|+|+ |.+|+.++..|++.|. +|++++|+.++.+.+.+.+   ..  ...    ++.+.+++.+.+.++|+|
T Consensus       139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~---~~--~~~----~~~~~~~~~~~~~~aDiv  208 (297)
T 2egg_A          139 LDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREG---DE--RRS----AYFSLAEAETRLAEYDII  208 (297)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHS---CS--SSC----CEECHHHHHHTGGGCSEE
T ss_pred             CCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh---hh--ccC----ceeeHHHHHhhhccCCEE
Confidence            35689999998 7899999999999997 9999999987777666521   11  000    122335677778899999


Q ss_pred             EecCCCCC
Q 043792          103 FYSFEPPS  110 (294)
Q Consensus       103 ih~a~~~~  110 (294)
                      |++.+...
T Consensus       209 In~t~~~~  216 (297)
T 2egg_A          209 INTTSVGM  216 (297)
T ss_dssp             EECSCTTC
T ss_pred             EECCCCCC
Confidence            99976543

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.68  E-value=6.7e-05  Score=63.11  Aligned_cols=75  Identities=20%  Similarity=0.072  Sum_probs=55.4

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      ..+.+|+|+||+|.+|..+++.+...|.+|+++++++++.+.+.+   .     +.+.+ .|..+.+++.+.+.++|+||
T Consensus       124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~---~-----ga~~~-~~~~~~~~~~~~~~~~d~vi  194 (302)
T 1iz0_A          124 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA---L-----GAEEA-ATYAEVPERAKAWGGLDLVL  194 (302)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH---T-----TCSEE-EEGGGHHHHHHHTTSEEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh---c-----CCCEE-EECCcchhHHHHhcCceEEE
Confidence            357899999999999999999999999999999998777665554   3     22221 24433134544557899999


Q ss_pred             ecCCC
Q 043792          104 YSFEP  108 (294)
Q Consensus       104 h~a~~  108 (294)
                      + ++.
T Consensus       195 d-~g~  198 (302)
T 1iz0_A          195 E-VRG  198 (302)
T ss_dssp             E-CSC
T ss_pred             E-CCH
Confidence            9 874

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=97.68  E-value=0.00049  Score=58.24  Aligned_cols=103  Identities=9%  Similarity=0.055  Sum_probs=69.7

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCC--eEEEEecCCCChhh--H--HHHHhhccCCCCeEEEECCCCChhHHHHHhcc
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGY--TVHAALHNHGKLQC--I--EEELINYNEEKKLKVFQADPFDYHSLVNALKG   98 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~--l--~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~   98 (294)
                      ++|||.|+|+ |.+|..++..|+..|+  +|++++|+++..+.  +  .+.+   ......++...  .+.+    .+++
T Consensus         6 ~~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~---~~~~~~~v~~~--~~~~----~~~~   75 (319)
T 1lld_A            6 KPTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGS---SFYPTVSIDGS--DDPE----ICRD   75 (319)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTG---GGSTTCEEEEE--SCGG----GGTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhh---hhcCCeEEEeC--CCHH----HhCC
Confidence            3579999998 9999999999999998  99999998644331  1  1111   00112232222  1222    4678


Q ss_pred             CCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhc
Q 043792           99 CSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQT  137 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~  137 (294)
                      +|+||-+++..........+....|+.....+++.+.+.
T Consensus        76 aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~  114 (319)
T 1lld_A           76 ADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV  114 (319)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999987655444445577888888888888887765

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=97.68  E-value=0.00029  Score=59.69  Aligned_cols=112  Identities=13%  Similarity=0.210  Sum_probs=75.0

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCC--eEEEEecCCCChhhHHHHHhh-ccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGY--TVHAALHNHGKLQCIEEELIN-YNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~~~~~~-~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      |||.|+|+ |.+|..++..|++.|+  +|++++++++..+.+...+.. ........+...   |.+    .++++|+||
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~---d~~----~~~~aDvVi   72 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAG---DYA----DLKGSDVVI   72 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEEC---CGG----GGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeC---CHH----HhCCCCEEE
Confidence            58999998 9999999999999998  999999986555443321100 000112233222   322    467999999


Q ss_pred             ecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCc-EEEEec
Q 043792          104 YSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD-KVVFTS  147 (294)
Q Consensus       104 h~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~v~~S  147 (294)
                      -+++..........+....|+.....+++.+.+. ... .+|.+|
T Consensus        73 iav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~~~~~ii~~t  116 (319)
T 1a5z_A           73 VAAGVPQKPGETRLQLLGRNARVMKEIARNVSKY-APDSIVIVVT  116 (319)
T ss_dssp             ECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECS
T ss_pred             EccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEeC
Confidence            9988766443344477888888888999888776 322 455544

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.67  E-value=5.4e-05  Score=65.19  Aligned_cols=77  Identities=12%  Similarity=0.038  Sum_probs=54.9

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCCh---hHHHHHh-cc
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDY---HSLVNAL-KG   98 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~---~~~~~~~-~~   98 (294)
                      ...+.+|||+||+|.+|..+++.+...|.+|+++++++++.+.+++   +     +...+ .|..+.   +.+.+.. .+
T Consensus       165 ~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~---l-----Ga~~~-~~~~~~~~~~~~~~~~~~g  235 (353)
T 4dup_A          165 LTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER---L-----GAKRG-INYRSEDFAAVIKAETGQG  235 (353)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---H-----TCSEE-EETTTSCHHHHHHHHHSSC
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh---c-----CCCEE-EeCCchHHHHHHHHHhCCC
Confidence            3457899999999999999999999999999999998876665554   3     22211 233332   2233322 25


Q ss_pred             CCEEEecCCC
Q 043792           99 CSGLFYSFEP  108 (294)
Q Consensus        99 ~d~Vih~a~~  108 (294)
                      +|+||++++.
T Consensus       236 ~Dvvid~~g~  245 (353)
T 4dup_A          236 VDIILDMIGA  245 (353)
T ss_dssp             EEEEEESCCG
T ss_pred             ceEEEECCCH
Confidence            8999999984

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.65  E-value=0.00012  Score=62.72  Aligned_cols=77  Identities=8%  Similarity=0.049  Sum_probs=56.2

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCCh---hHHHHHhc--
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDY---HSLVNALK--   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~---~~~~~~~~--   97 (294)
                      ...+.+|||+||+|.+|..++..+...|.+|+++++++++.+.+.+   +     +.+.+ .|..+.   +.+.+...  
T Consensus       142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~---l-----ga~~~-~~~~~~~~~~~~~~~~~~~  212 (340)
T 3gms_A          142 LQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR---L-----GAAYV-IDTSTAPLYETVMELTNGI  212 (340)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH---H-----TCSEE-EETTTSCHHHHHHHHTTTS
T ss_pred             cCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh---C-----CCcEE-EeCCcccHHHHHHHHhCCC
Confidence            3457899999999999999999999999999999999888776665   3     22211 133332   23333332  


Q ss_pred             cCCEEEecCCC
Q 043792           98 GCSGLFYSFEP  108 (294)
Q Consensus        98 ~~d~Vih~a~~  108 (294)
                      ++|+||++++.
T Consensus       213 g~Dvvid~~g~  223 (340)
T 3gms_A          213 GADAAIDSIGG  223 (340)
T ss_dssp             CEEEEEESSCH
T ss_pred             CCcEEEECCCC
Confidence            58999999883

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=97.65  E-value=5e-05  Score=64.13  Aligned_cols=73  Identities=15%  Similarity=0.069  Sum_probs=50.7

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEE--------CCCCChhHHHHHhc
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQ--------ADPFDYHSLVNALK   97 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~--------~Dl~~~~~~~~~~~   97 (294)
                      ||+|.|+|+ |.+|+.++..|.+.|++|++++|+++..+.+.+   .     ++....        .+..+.+++.+.++
T Consensus         3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~---~-----g~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (316)
T 2ew2_A            3 AMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRK---N-----GLIADFNGEEVVANLPIFSPEEIDHQNE   73 (316)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH---H-----CEEEEETTEEEEECCCEECGGGCCTTSC
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh---C-----CEEEEeCCCeeEecceeecchhhcccCC
Confidence            579999997 999999999999999999999998766665554   1     232221        12223333333445


Q ss_pred             cCCEEEecCC
Q 043792           98 GCSGLFYSFE  107 (294)
Q Consensus        98 ~~d~Vih~a~  107 (294)
                      ++|+||-+..
T Consensus        74 ~~d~vi~~v~   83 (316)
T 2ew2_A           74 QVDLIIALTK   83 (316)
T ss_dssp             CCSEEEECSC
T ss_pred             CCCEEEEEec
Confidence            7899988865

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=97.64  E-value=0.00033  Score=61.85  Aligned_cols=95  Identities=11%  Similarity=0.060  Sum_probs=64.7

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCC-C---eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCCh---hHHHHHhcc
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRG-Y---TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDY---HSLVNALKG   98 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g-~---~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~---~~~~~~~~~   98 (294)
                      .+||+|+|+ |.||+.+++.|++++ +   +|++.+...... .+.+.  .     ++++...++++.   +.+.+++++
T Consensus        13 ~~rVlIIGa-GgVG~~va~lla~~~dv~~~~I~vaD~~~~~~-~~~~~--~-----g~~~~~~~Vdadnv~~~l~aLl~~   83 (480)
T 2ph5_A           13 KNRFVILGF-GCVGQALMPLIFEKFDIKPSQVTIIAAEGTKV-DVAQQ--Y-----GVSFKLQQITPQNYLEVIGSTLEE   83 (480)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHHBCCCGGGEEEEESSCCSC-CHHHH--H-----TCEEEECCCCTTTHHHHTGGGCCT
T ss_pred             CCCEEEECc-CHHHHHHHHHHHhCCCCceeEEEEeccchhhh-hHHhh--c-----CCceeEEeccchhHHHHHHHHhcC
Confidence            478999995 999999999999864 4   688887765443 22221  1     456676666443   335567777


Q ss_pred             CCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792           99 CSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      .|+|||++-+..                ...++++|.+. |+ +  |++++
T Consensus        84 ~DvVIN~s~~~~----------------~l~Im~aclea-Gv-~--YlDTa  114 (480)
T 2ph5_A           84 NDFLIDVSIGIS----------------SLALIILCNQK-GA-L--YINAA  114 (480)
T ss_dssp             TCEEEECCSSSC----------------HHHHHHHHHHH-TC-E--EEESS
T ss_pred             CCEEEECCcccc----------------CHHHHHHHHHc-CC-C--EEECC
Confidence            799998665433                44689999998 75 3  44554

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.64  E-value=0.00015  Score=62.73  Aligned_cols=98  Identities=10%  Similarity=0.040  Sum_probs=68.4

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      .+.+|||+|+ |.+|..+++.+...|.+|+++++++++.+.+...  +     +.+. ..|..+.+.+.++..++|+||+
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~--l-----Ga~~-v~~~~~~~~~~~~~~~~D~vid  257 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKN--F-----GADS-FLVSRDQEQMQAAAGTLDGIID  257 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHT--S-----CCSE-EEETTCHHHHHHTTTCEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh--c-----CCce-EEeccCHHHHHHhhCCCCEEEE
Confidence            5789999996 9999999999999999999999987766554421  2     2221 1355566667666668999999


Q ss_pred             cCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792          105 SFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus       105 ~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      +++....               ....++.++..   .++|.+++.
T Consensus       258 ~~g~~~~---------------~~~~~~~l~~~---G~iv~~g~~  284 (366)
T 1yqd_A          258 TVSAVHP---------------LLPLFGLLKSH---GKLILVGAP  284 (366)
T ss_dssp             CCSSCCC---------------SHHHHHHEEEE---EEEEECCCC
T ss_pred             CCCcHHH---------------HHHHHHHHhcC---CEEEEEccC
Confidence            9885421               11344554444   478888764

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.61  E-value=0.00046  Score=59.18  Aligned_cols=94  Identities=10%  Similarity=0.165  Sum_probs=64.7

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeE-EEECCCCCh---hHHHHHhc--cCC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLK-VFQADPFDY---HSLVNALK--GCS  100 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~-~~~~Dl~~~---~~~~~~~~--~~d  100 (294)
                      ++|+|+||+|.+|..+++.+...|.+|+++++++++.+.+++   +     +.+ ++  |..+.   +.+.+...  ++|
T Consensus       166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~---~-----Ga~~~~--~~~~~~~~~~v~~~~~~~g~D  235 (349)
T 3pi7_A          166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKD---I-----GAAHVL--NEKAPDFEATLREVMKAEQPR  235 (349)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHH---H-----TCSEEE--ETTSTTHHHHHHHHHHHHCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---c-----CCCEEE--ECCcHHHHHHHHHHhcCCCCc
Confidence            789999999999999999999999999999998877766655   3     222 22  33332   23333332  699


Q ss_pred             EEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792          101 GLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus       101 ~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      +||++++..                .....+++++..   .++|.+++.
T Consensus       236 ~vid~~g~~----------------~~~~~~~~l~~~---G~iv~~G~~  265 (349)
T 3pi7_A          236 IFLDAVTGP----------------LASAIFNAMPKR---ARWIIYGRL  265 (349)
T ss_dssp             EEEESSCHH----------------HHHHHHHHSCTT---CEEEECCCS
T ss_pred             EEEECCCCh----------------hHHHHHhhhcCC---CEEEEEecc
Confidence            999998831                123345554444   488887754

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.60  E-value=0.00023  Score=60.97  Aligned_cols=76  Identities=17%  Similarity=0.173  Sum_probs=55.2

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCe-EEEECCCCCh-hHHHHHhc--cC
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKL-KVFQADPFDY-HSLVNALK--GC   99 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v-~~~~~Dl~~~-~~~~~~~~--~~   99 (294)
                      ..+.+|||+||+|.+|..+++.+...|.+|++++++.++.+.+.+   +     +. .++..+ .+. +.+.+...  ++
T Consensus       158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~---~-----ga~~v~~~~-~~~~~~v~~~~~~~g~  228 (342)
T 4eye_A          158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS---V-----GADIVLPLE-EGWAKAVREATGGAGV  228 (342)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH---H-----TCSEEEESS-TTHHHHHHHHTTTSCE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh---c-----CCcEEecCc-hhHHHHHHHHhCCCCc
Confidence            457899999999999999999999999999999998877766655   3     22 233333 222 23344433  58


Q ss_pred             CEEEecCCC
Q 043792          100 SGLFYSFEP  108 (294)
Q Consensus       100 d~Vih~a~~  108 (294)
                      |+||++++.
T Consensus       229 Dvvid~~g~  237 (342)
T 4eye_A          229 DMVVDPIGG  237 (342)
T ss_dssp             EEEEESCC-
T ss_pred             eEEEECCch
Confidence            999999985

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.59  E-value=0.00012  Score=63.50  Aligned_cols=78  Identities=19%  Similarity=0.115  Sum_probs=58.3

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      ..+++|+|+|+ |.+|+.+++.+...|.+|++++|++++.+.+.+   ..  ...+.   .+..+.+++.+.+.++|+||
T Consensus       166 l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~---~~--g~~~~---~~~~~~~~l~~~l~~aDvVi  236 (377)
T 2vhw_A          166 VEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDA---EF--CGRIH---TRYSSAYELEGAVKRADLVI  236 (377)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HT--TTSSE---EEECCHHHHHHHHHHCSEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH---hc--CCeeE---eccCCHHHHHHHHcCCCEEE
Confidence            45789999998 999999999999999999999998766555443   11  11221   12345567888888999999


Q ss_pred             ecCCCCC
Q 043792          104 YSFEPPS  110 (294)
Q Consensus       104 h~a~~~~  110 (294)
                      .+++.+.
T Consensus       237 ~~~~~p~  243 (377)
T 2vhw_A          237 GAVLVPG  243 (377)
T ss_dssp             ECCCCTT
T ss_pred             ECCCcCC
Confidence            9987544

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=97.59  E-value=5.7e-05  Score=66.96  Aligned_cols=82  Identities=16%  Similarity=0.135  Sum_probs=51.2

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeE-EE-----ECCCCChhHHHHHhccCC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLK-VF-----QADPFDYHSLVNALKGCS  100 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~-~~-----~~Dl~~~~~~~~~~~~~d  100 (294)
                      |||.|+|+ |++|..++..|++.|++|++++|++++.+.+.... .....+.+. .+     .+.+.-..++.++++++|
T Consensus         1 mkI~VIG~-G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~-~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aD   78 (436)
T 1mv8_A            1 MRISIFGL-GYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGK-SPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSD   78 (436)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTC-CSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCC-CCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCC
Confidence            58999995 99999999999999999999999876655544300 000000000 00     001111123445677899


Q ss_pred             EEEecCCCCC
Q 043792          101 GLFYSFEPPS  110 (294)
Q Consensus       101 ~Vih~a~~~~  110 (294)
                      +||-+...+.
T Consensus        79 vviiaVptp~   88 (436)
T 1mv8_A           79 VSFICVGTPS   88 (436)
T ss_dssp             EEEECCCCCB
T ss_pred             EEEEEcCCCc
Confidence            9999986543

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.57  E-value=0.00017  Score=62.17  Aligned_cols=77  Identities=8%  Similarity=-0.027  Sum_probs=59.0

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCC------------------
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADP------------------   86 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl------------------   86 (294)
                      ...+|+|+|+ |-+|..+++.+...|.+|++++|++.+.+.+.+   .     +.+++..++                  
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~---l-----Ga~~~~l~~~~~~~~gya~~~~~~~~~  253 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS---V-----GAQWLDLGIDAAGEGGYARELSEAERA  253 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH---T-----TCEECCCC-------------CHHHHH
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---c-----CCeEEeccccccccccchhhhhHHHHh
Confidence            4689999998 999999999999999999999999887776655   3     444443321                  


Q ss_pred             CChhHHHHHhccCCEEEecCCCCC
Q 043792           87 FDYHSLVNALKGCSGLFYSFEPPS  110 (294)
Q Consensus        87 ~~~~~~~~~~~~~d~Vih~a~~~~  110 (294)
                      .+.+.+.++++++|+||.++..+.
T Consensus       254 ~~~~~l~e~l~~aDIVI~tv~iPg  277 (381)
T 3p2y_A          254 QQQQALEDAITKFDIVITTALVPG  277 (381)
T ss_dssp             HHHHHHHHHHTTCSEEEECCCCTT
T ss_pred             hhHHHHHHHHhcCCEEEECCCCCC
Confidence            123467788889999999875543

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.55  E-value=0.00093  Score=55.54  Aligned_cols=106  Identities=16%  Similarity=0.112  Sum_probs=66.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCC------------------CChhhHHHHHhhccCCCCeEEEEC
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRG-YTVHAALHNH------------------GKLQCIEEELINYNEEKKLKVFQA   84 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~------------------~~~~~l~~~~~~~~~~~~v~~~~~   84 (294)
                      .+..+|+|.|+ |.+|+.+++.|...| -++++++++.                  .+.+.+.+.+......-+++.+..
T Consensus        34 L~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~  112 (292)
T 3h8v_A           34 IRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNY  112 (292)
T ss_dssp             GGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECC
T ss_pred             HhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecc
Confidence            34579999998 889999999999998 4677777654                  222333332211222234566667


Q ss_pred             CCCChhHHHHHh-----------ccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEec
Q 043792           85 DPFDYHSLVNAL-----------KGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTS  147 (294)
Q Consensus        85 Dl~~~~~~~~~~-----------~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~S  147 (294)
                      ++++.+.+.+++           +++|+||.+.-.               ...-..+-++|.+. ++ .+|+.+
T Consensus       113 ~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn---------------~~~R~~in~~c~~~-~~-Pli~~g  169 (292)
T 3h8v_A          113 NITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDN---------------FEARMTINTACNEL-GQ-TWMESG  169 (292)
T ss_dssp             CTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSS---------------HHHHHHHHHHHHHH-TC-CEEEEE
T ss_pred             cCCcHHHHHHHhhhhcccccccCCCCCEEEECCcc---------------hhhhhHHHHHHHHh-CC-CEEEee
Confidence            777666666665           578999987542               22223455667666 65 455543

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=97.54  E-value=0.00052  Score=58.61  Aligned_cols=93  Identities=22%  Similarity=0.173  Sum_probs=55.1

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCC---eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGY---TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ++||+|.||+|++|+.+++.|+++++   ++..+....+....      ....+..+.+.  |+ +++    .++++|+|
T Consensus         6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~------~~~~g~~i~~~--~~-~~~----~~~~~DvV   72 (340)
T 2hjs_A            6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQR------MGFAESSLRVG--DV-DSF----DFSSVGLA   72 (340)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCE------EEETTEEEECE--EG-GGC----CGGGCSEE
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCc------cccCCcceEEe--cC-CHH----HhcCCCEE
Confidence            47899999999999999999997654   45555422111000      00000112221  22 222    14689999


Q ss_pred             EecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792          103 FYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus       103 ih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      |-+.+..                .+..+++.+.+. |+ ++|.+|+.
T Consensus        73 ~~a~g~~----------------~s~~~a~~~~~a-G~-kvId~Sa~  101 (340)
T 2hjs_A           73 FFAAAAE----------------VSRAHAERARAA-GC-SVIDLSGA  101 (340)
T ss_dssp             EECSCHH----------------HHHHHHHHHHHT-TC-EEEETTCT
T ss_pred             EEcCCcH----------------HHHHHHHHHHHC-CC-EEEEeCCC
Confidence            9997721                234566666666 76 47888875

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=97.54  E-value=0.00065  Score=57.76  Aligned_cols=102  Identities=15%  Similarity=0.071  Sum_probs=59.7

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHC-CCeEEEEecCC---CChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCC
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLR-GYTVHAALHNH---GKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCS  100 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~---~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d  100 (294)
                      .|+||.|.||||++|+.+++.|.++ .+++..+..+.   +.-+.+.+..........+.+...  .+.+   ++++++|
T Consensus         3 ~M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~--~~~~---~~~~~~D   77 (337)
T 3dr3_A            3 AMLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPM--SDIS---EFSPGVD   77 (337)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEE--SSGG---GTCTTCS
T ss_pred             CceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEecc--CCHH---HHhcCCC
Confidence            3689999999999999999999985 56888775543   333333321000000012222222  0222   2236899


Q ss_pred             EEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792          101 GLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus       101 ~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      +||-|.+..                .+..++..+.+. ++ ++|=+|+.
T Consensus        78 vvf~a~p~~----------------~s~~~~~~~~~~-g~-~vIDlSa~  108 (337)
T 3dr3_A           78 VVFLATAHE----------------VSHDLAPQFLEA-GC-VVFDLSGA  108 (337)
T ss_dssp             EEEECSCHH----------------HHHHHHHHHHHT-TC-EEEECSST
T ss_pred             EEEECCChH----------------HHHHHHHHHHHC-CC-EEEEcCCc
Confidence            999886521                133455555555 75 68888885

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=97.54  E-value=0.00021  Score=59.89  Aligned_cols=65  Identities=8%  Similarity=0.027  Sum_probs=50.8

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEec
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYS  105 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~  105 (294)
                      +|+|.|+|. |.+|..+++.|++.|++|++++|++++.+.+.+   .     ++..       ..++.++++ +|+||-+
T Consensus        15 ~~~I~vIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~---~-----g~~~-------~~~~~~~~~-aDvvi~~   77 (296)
T 3qha_A           15 QLKLGYIGL-GNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAE---A-----GATL-------ADSVADVAA-ADLIHIT   77 (296)
T ss_dssp             CCCEEEECC-STTHHHHHHHHTTSTTCEEEECSSTTTSHHHHH---T-----TCEE-------CSSHHHHTT-SSEEEEC
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH---C-----CCEE-------cCCHHHHHh-CCEEEEE
Confidence            468999996 999999999999999999999999988777665   2     3322       123555666 8888887


Q ss_pred             CC
Q 043792          106 FE  107 (294)
Q Consensus       106 a~  107 (294)
                      ..
T Consensus        78 vp   79 (296)
T 3qha_A           78 VL   79 (296)
T ss_dssp             CS
T ss_pred             CC
Confidence            65

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.54  E-value=0.00016  Score=61.51  Aligned_cols=77  Identities=9%  Similarity=0.062  Sum_probs=55.0

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCCh---hHHHHHhc--
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDY---HSLVNALK--   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~---~~~~~~~~--   97 (294)
                      ...+.+|||+||+|.+|..+++.+...|.+|+++++++++.+.+++   .   +.. .++  |..+.   +.+.+...  
T Consensus       138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~---~---Ga~-~~~--~~~~~~~~~~~~~~~~~~  208 (325)
T 3jyn_A          138 VKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKA---L---GAW-ETI--DYSHEDVAKRVLELTDGK  208 (325)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH---H---TCS-EEE--ETTTSCHHHHHHHHTTTC
T ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---c---CCC-EEE--eCCCccHHHHHHHHhCCC
Confidence            3457899999999999999999999999999999998766665554   3   111 222  33332   33344433  


Q ss_pred             cCCEEEecCCC
Q 043792           98 GCSGLFYSFEP  108 (294)
Q Consensus        98 ~~d~Vih~a~~  108 (294)
                      ++|+||++++.
T Consensus       209 g~Dvvid~~g~  219 (325)
T 3jyn_A          209 KCPVVYDGVGQ  219 (325)
T ss_dssp             CEEEEEESSCG
T ss_pred             CceEEEECCCh
Confidence            58999999884

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.53  E-value=0.00094  Score=54.47  Aligned_cols=106  Identities=16%  Similarity=0.191  Sum_probs=64.2

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCC-------------------CChhhHHHHHhhccCCCCeEEEEC
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNH-------------------GKLQCIEEELINYNEEKKLKVFQA   84 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~-------------------~~~~~l~~~~~~~~~~~~v~~~~~   84 (294)
                      +..+|+|.|+ |.+|+++++.|...|. ++++++++.                   .+.+.+.+.+......-+++.+..
T Consensus        27 ~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~  105 (251)
T 1zud_1           27 LDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQ  105 (251)
T ss_dssp             HTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred             hcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEec
Confidence            3579999998 6699999999999995 677776542                   222223332111111223444444


Q ss_pred             CCCChhHHHHHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792           85 DPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus        85 Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      ++ +.+.+.++++++|+||.+...               ...-..+-++|.+. ++ .+|+.+..
T Consensus       106 ~~-~~~~~~~~~~~~DvVi~~~d~---------------~~~r~~l~~~~~~~-~~-p~i~~~~~  152 (251)
T 1zud_1          106 RL-TGEALKDAVARADVVLDCTDN---------------MATRQEINAACVAL-NT-PLITASAV  152 (251)
T ss_dssp             CC-CHHHHHHHHHHCSEEEECCSS---------------HHHHHHHHHHHHHT-TC-CEEEEEEE
T ss_pred             cC-CHHHHHHHHhcCCEEEECCCC---------------HHHHHHHHHHHHHh-CC-CEEEEecc
Confidence            55 446678888899999998542               11123455566666 64 46665543

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=97.53  E-value=0.00015  Score=61.15  Aligned_cols=68  Identities=19%  Similarity=0.213  Sum_probs=51.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      ..||+|.|+|. |.+|..+++.|++.|++|++++|++++.+.+.+   .     ++..       ..++.++++++|+||
T Consensus        19 ~~m~~I~iIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~---~-----g~~~-------~~~~~~~~~~aDvvi   82 (310)
T 3doj_A           19 SHMMEVGFLGL-GIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVE---H-----GASV-------CESPAEVIKKCKYTI   82 (310)
T ss_dssp             CCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHH---T-----TCEE-------CSSHHHHHHHCSEEE
T ss_pred             ccCCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH---C-----CCeE-------cCCHHHHHHhCCEEE
Confidence            45689999996 999999999999999999999999887776655   2     2221       123455666778888


Q ss_pred             ecCC
Q 043792          104 YSFE  107 (294)
Q Consensus       104 h~a~  107 (294)
                      -+..
T Consensus        83 ~~vp   86 (310)
T 3doj_A           83 AMLS   86 (310)
T ss_dssp             ECCS
T ss_pred             EEcC
Confidence            7754

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=97.53  E-value=0.00039  Score=58.69  Aligned_cols=72  Identities=17%  Similarity=0.117  Sum_probs=49.9

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCC--CChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNH--GKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGC   99 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~--~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~   99 (294)
                      ...+|+|.|+|. |.+|..+++.|++.|+ +|++++|++  +..+.+.+   .     ++..       ..+..++++++
T Consensus        21 ~~~~~~I~iIG~-G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~---~-----g~~~-------~~~~~e~~~~a   84 (312)
T 3qsg_A           21 QSNAMKLGFIGF-GEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEE---L-----GVSC-------KASVAEVAGEC   84 (312)
T ss_dssp             ----CEEEEECC-SHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHH---T-----TCEE-------CSCHHHHHHHC
T ss_pred             cCCCCEEEEECc-cHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHH---C-----CCEE-------eCCHHHHHhcC
Confidence            345689999997 9999999999999999 999999974  33333333   1     3322       12345667789


Q ss_pred             CEEEecCCCCC
Q 043792          100 SGLFYSFEPPS  110 (294)
Q Consensus       100 d~Vih~a~~~~  110 (294)
                      |+||-+.....
T Consensus        85 DvVi~~vp~~~   95 (312)
T 3qsg_A           85 DVIFSLVTAQA   95 (312)
T ss_dssp             SEEEECSCTTT
T ss_pred             CEEEEecCchh
Confidence            99998876543

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.53  E-value=0.00018  Score=61.70  Aligned_cols=76  Identities=13%  Similarity=0.110  Sum_probs=54.5

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHC-CCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChh---HHHHHhc--
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLR-GYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYH---SLVNALK--   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~---~~~~~~~--   97 (294)
                      ..+++|||+||+|.+|..+++.+... |.+|+++++++++.+.+++   .     +.+.+ .|..+.+   .+.+...  
T Consensus       169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~---~-----g~~~~-~~~~~~~~~~~~~~~~~~~  239 (347)
T 1jvb_A          169 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR---A-----GADYV-INASMQDPLAEIRRITESK  239 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH---H-----TCSEE-EETTTSCHHHHHHHHTTTS
T ss_pred             CCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH---h-----CCCEE-ecCCCccHHHHHHHHhcCC
Confidence            45789999999989999999999999 9999999988766555544   2     12111 2443332   3444443  


Q ss_pred             cCCEEEecCCC
Q 043792           98 GCSGLFYSFEP  108 (294)
Q Consensus        98 ~~d~Vih~a~~  108 (294)
                      ++|+||++++.
T Consensus       240 ~~d~vi~~~g~  250 (347)
T 1jvb_A          240 GVDAVIDLNNS  250 (347)
T ss_dssp             CEEEEEESCCC
T ss_pred             CceEEEECCCC
Confidence            68999999984

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.52  E-value=0.0002  Score=61.10  Aligned_cols=99  Identities=16%  Similarity=0.135  Sum_probs=65.9

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCCh---hHHHHHhc--
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDY---HSLVNALK--   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~---~~~~~~~~--   97 (294)
                      ...+.+|||+||+|.+|..++..+...|.+|+++++++++.+.+++   +   +.. .++  |..+.   +.+.+...  
T Consensus       146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~---~---ga~-~~~--~~~~~~~~~~~~~~~~~~  216 (334)
T 3qwb_A          146 VKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKE---Y---GAE-YLI--NASKEDILRQVLKFTNGK  216 (334)
T ss_dssp             CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---T---TCS-EEE--ETTTSCHHHHHHHHTTTS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---c---CCc-EEE--eCCCchHHHHHHHHhCCC
Confidence            3457899999999999999999999999999999998766554444   2   111 122  33332   33444432  


Q ss_pred             cCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792           98 GCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      ++|+||++++...                ....++.++..   .++|.++..
T Consensus       217 g~D~vid~~g~~~----------------~~~~~~~l~~~---G~iv~~G~~  249 (334)
T 3qwb_A          217 GVDASFDSVGKDT----------------FEISLAALKRK---GVFVSFGNA  249 (334)
T ss_dssp             CEEEEEECCGGGG----------------HHHHHHHEEEE---EEEEECCCT
T ss_pred             CceEEEECCChHH----------------HHHHHHHhccC---CEEEEEcCC
Confidence            5899999998411                22345554444   478887754

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.51  E-value=0.00035  Score=60.68  Aligned_cols=77  Identities=12%  Similarity=0.012  Sum_probs=58.6

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECC----------------CCC
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQAD----------------PFD   88 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~D----------------l~~   88 (294)
                      ...+|+|+|+ |-+|..+++.+...|.+|+++++++.+.+.+.+   .     +.+++..+                +++
T Consensus       189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~---~-----G~~~~~~~~~~~~d~~~~~~ya~e~s~  259 (405)
T 4dio_A          189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS---L-----GAKFIAVEDEEFKAAETAGGYAKEMSG  259 (405)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH---T-----TCEECCCCC-----------------C
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH---c-----CCceeecccccccccccccchhhhcch
Confidence            4579999998 999999999999999999999999887666655   3     33433322                222


Q ss_pred             ------hhHHHHHhccCCEEEecCCCCC
Q 043792           89 ------YHSLVNALKGCSGLFYSFEPPS  110 (294)
Q Consensus        89 ------~~~~~~~~~~~d~Vih~a~~~~  110 (294)
                            .+.+.++++++|+||.++..+.
T Consensus       260 ~~~~~~~~~l~e~l~~aDVVI~tvlipg  287 (405)
T 4dio_A          260 EYQVKQAALVAEHIAKQDIVITTALIPG  287 (405)
T ss_dssp             HHHHHHHHHHHHHHHTCSEEEECCCCSS
T ss_pred             hhhhhhHhHHHHHhcCCCEEEECCcCCC
Confidence                  2467888899999999976554

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=97.51  E-value=9.4e-05  Score=61.00  Aligned_cols=73  Identities=12%  Similarity=0.037  Sum_probs=45.2

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHC-CCeEEEE-ecCCCCh--hhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCC
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLR-GYTVHAA-LHNHGKL--QCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCS  100 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~--~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d  100 (294)
                      +|+||.|+|++|.+|+.+++.+.+. +.++.++ +|+.+..  ....+   +.....       ++.-..++.+++.++|
T Consensus         6 ~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~ge---l~g~~~-------gv~v~~dl~~ll~~~D   75 (272)
T 4f3y_A            6 SSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGA---FLGKQT-------GVALTDDIERVCAEAD   75 (272)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTT---TTTCCC-------SCBCBCCHHHHHHHCS
T ss_pred             cccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHH---HhCCCC-------CceecCCHHHHhcCCC
Confidence            4689999999999999999999876 6777775 5553321  00111   100000       2222234555666789


Q ss_pred             EEEecCC
Q 043792          101 GLFYSFE  107 (294)
Q Consensus       101 ~Vih~a~  107 (294)
                      +||++..
T Consensus        76 VVIDfT~   82 (272)
T 4f3y_A           76 YLIDFTL   82 (272)
T ss_dssp             EEEECSC
T ss_pred             EEEEcCC
Confidence            9998853

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=97.50  E-value=0.0027  Score=53.40  Aligned_cols=111  Identities=18%  Similarity=0.230  Sum_probs=77.1

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhhc--cCCCCeEEEE-CCCCChhHHHHHhccCCEEE
Q 043792           28 TVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINY--NEEKKLKVFQ-ADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~--~~~~~v~~~~-~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      ||.|+|| |.+|..++..|+..|. +|..++++.++.+....++...  ......++.. .|   .    +.++++|+||
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d---~----~a~~~aD~Vi   72 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNS---Y----EDMRGSDIVL   72 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESC---G----GGGTTCSEEE
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCC---H----HHhCCCCEEE
Confidence            6899998 9999999999988887 6999999876654322211010  0111233332 33   2    3578999999


Q ss_pred             ecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCc-EEEEec
Q 043792          104 YSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD-KVVFTS  147 (294)
Q Consensus       104 h~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~v~~S  147 (294)
                      -.++.+........+....|+.....+++.+.+. ... ++|.+|
T Consensus        73 ~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~t  116 (308)
T 2d4a_B           73 VTAGIGRKPGMTREQLLEANANTMADLAEKIKAY-AKDAIVVITT  116 (308)
T ss_dssp             ECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECC
T ss_pred             EeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeC
Confidence            9999877655556688899999999999998876 322 566554

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.47  E-value=0.0001  Score=60.97  Aligned_cols=69  Identities=9%  Similarity=0.065  Sum_probs=52.4

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ..+++++|+|+ |.+|+.++..|.+.|. +|++++|+.++.+.+..         .+...     ..+++.+++.++|+|
T Consensus       115 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~---------~~~~~-----~~~~~~~~~~~aDiV  179 (277)
T 3don_A          115 IEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL---------NINKI-----NLSHAESHLDEFDII  179 (277)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS---------CCEEE-----CHHHHHHTGGGCSEE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH---------hcccc-----cHhhHHHHhcCCCEE
Confidence            35689999998 8899999999999998 89999998766544322         22221     345567778899999


Q ss_pred             EecCC
Q 043792          103 FYSFE  107 (294)
Q Consensus       103 ih~a~  107 (294)
                      |++-.
T Consensus       180 InaTp  184 (277)
T 3don_A          180 INTTP  184 (277)
T ss_dssp             EECCC
T ss_pred             EECcc
Confidence            99844

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.44  E-value=0.00069  Score=60.36  Aligned_cols=98  Identities=20%  Similarity=0.288  Sum_probs=75.1

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHH-hccCCEEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNA-LKGCSGLF  103 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~Vi  103 (294)
                      ..++|+|.|| |-+|.++++.| +++++|.++.+++++.+.+.+++      ++..++.+|-+|.+-+.+. +.++|++|
T Consensus       234 ~~~~v~I~Gg-G~ig~~lA~~L-~~~~~v~iIE~d~~r~~~la~~l------~~~~Vi~GD~td~~~L~ee~i~~~D~~i  305 (461)
T 4g65_A          234 PYRRIMIVGG-GNIGASLAKRL-EQTYSVKLIERNLQRAEKLSEEL------ENTIVFCGDAADQELLTEENIDQVDVFI  305 (461)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHH-TTTSEEEEEESCHHHHHHHHHHC------TTSEEEESCTTCHHHHHHTTGGGCSEEE
T ss_pred             cccEEEEEcc-hHHHHHHHHHh-hhcCceEEEecCHHHHHHHHHHC------CCceEEeccccchhhHhhcCchhhcEEE
Confidence            3578999998 99999999997 56799999999988888877732      4788999999999988765 67899998


Q ss_pred             ecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEe
Q 043792          104 YSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFT  146 (294)
Q Consensus       104 h~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~  146 (294)
                      -+-+..           +.|+..+..    |++. |++|.|-.
T Consensus       306 a~T~~D-----------e~Ni~~~ll----Ak~~-gv~kvIa~  332 (461)
T 4g65_A          306 ALTNED-----------ETNIMSAML----AKRM-GAKKVMVL  332 (461)
T ss_dssp             ECCSCH-----------HHHHHHHHH----HHHT-TCSEEEEE
T ss_pred             EcccCc-----------HHHHHHHHH----HHHc-CCcccccc
Confidence            776531           356554433    3455 88887743

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=97.42  E-value=0.00077  Score=57.93  Aligned_cols=34  Identities=21%  Similarity=0.251  Sum_probs=29.2

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRG-YTVHAALHN   59 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~   59 (294)
                      ++||.|.||+|++|+.+++.|.+++ .+|.++.++
T Consensus         8 ~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s   42 (354)
T 1ys4_A            8 KIKVGVLGATGSVGQRFVQLLADHPMFELTALAAS   42 (354)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEEC
T ss_pred             cceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcc
Confidence            4799999999999999999998875 678888654

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=97.41  E-value=0.00014  Score=60.68  Aligned_cols=66  Identities=14%  Similarity=0.121  Sum_probs=50.5

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEec
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYS  105 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~  105 (294)
                      ||+|.|+|. |.+|+.+++.|++.|++|++++|++++.+.+.+   .     ++..       ..++.++++++|+||-+
T Consensus         1 M~~I~iiG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~---~-----g~~~-------~~~~~~~~~~advvi~~   64 (287)
T 3pdu_A            1 MTTYGFLGL-GIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVA---L-----GARQ-------ASSPAEVCAACDITIAM   64 (287)
T ss_dssp             CCCEEEECC-STTHHHHHHHHHHHTCCEEEECSSGGGGHHHHH---H-----TCEE-------CSCHHHHHHHCSEEEEC
T ss_pred             CCeEEEEcc-CHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH---C-----CCee-------cCCHHHHHHcCCEEEEE
Confidence            478999985 999999999999999999999999887776655   2     2221       12345566678888877


Q ss_pred             CC
Q 043792          106 FE  107 (294)
Q Consensus       106 a~  107 (294)
                      ..
T Consensus        65 v~   66 (287)
T 3pdu_A           65 LA   66 (287)
T ss_dssp             CS
T ss_pred             cC
Confidence            65

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=97.41  E-value=0.00019  Score=60.53  Aligned_cols=68  Identities=18%  Similarity=0.211  Sum_probs=52.3

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      ++|+|.|+|. |.+|+.+++.|++.|++|++++|++++.+.+.+   .     ++..       ..++.++++++|+||-
T Consensus         8 ~~~~IgiIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~---~-----g~~~-------~~~~~e~~~~aDvVi~   71 (306)
T 3l6d_A            8 FEFDVSVIGL-GAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVA---A-----GAHL-------CESVKAALSASPATIF   71 (306)
T ss_dssp             CSCSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHH---H-----TCEE-------CSSHHHHHHHSSEEEE
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---C-----CCee-------cCCHHHHHhcCCEEEE
Confidence            4679999986 999999999999999999999998877666554   2     2221       1245566778899998


Q ss_pred             cCCC
Q 043792          105 SFEP  108 (294)
Q Consensus       105 ~a~~  108 (294)
                      +...
T Consensus        72 ~vp~   75 (306)
T 3l6d_A           72 VLLD   75 (306)
T ss_dssp             CCSS
T ss_pred             EeCC
Confidence            8653

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=97.40  E-value=0.0033  Score=52.66  Aligned_cols=112  Identities=11%  Similarity=0.092  Sum_probs=71.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCC--eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGY--TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~  101 (294)
                      ..++||.|+|| |.+|..++..|+..|.  +|..++++++......+....  ...++.. ..|      + +.++++|+
T Consensus        12 ~~~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~--~~~~i~~-t~d------~-~~l~~aD~   80 (303)
T 2i6t_A           12 KTVNKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIF--NLPNVEI-SKD------L-SASAHSKV   80 (303)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHH--TCTTEEE-ESC------G-GGGTTCSE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhh--cCCCeEE-eCC------H-HHHCCCCE
Confidence            44689999997 9999999999999998  999999887422122120001  1124444 233      2 35789999


Q ss_pred             EEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCc-EEEEecC
Q 043792          102 LFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD-KVVFTSS  148 (294)
Q Consensus       102 Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~v~~Ss  148 (294)
                      ||-.++... ......+....|+.....+++.+.+. ... .++.+|-
T Consensus        81 Vi~aag~~~-pG~tR~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~sN  126 (303)
T 2i6t_A           81 VIFTVNSLG-SSQSYLDVVQSNVDMFRALVPALGHY-SQHSVLLVASQ  126 (303)
T ss_dssp             EEECCCC-----CCHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEECSS
T ss_pred             EEEcCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEcCC
Confidence            999998753 33344577888999999999988876 322 4455543

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.40  E-value=0.00022  Score=61.69  Aligned_cols=72  Identities=17%  Similarity=0.193  Sum_probs=52.3

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC---CChhhHHHHHhhccCCCCeEEEECCCCC--hhHHHHHhccCC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNH---GKLQCIEEELINYNEEKKLKVFQADPFD--YHSLVNALKGCS  100 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~---~~~~~l~~~~~~~~~~~~v~~~~~Dl~~--~~~~~~~~~~~d  100 (294)
                      +.+|||+|| |.+|..+++.+...|.+|++++++.   ++.+.+.+   +     +++.+  | .+  .+.+.+.-.++|
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~---~-----ga~~v--~-~~~~~~~~~~~~~~~d  248 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEE---T-----KTNYY--N-SSNGYDKLKDSVGKFD  248 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHH---H-----TCEEE--E-CTTCSHHHHHHHCCEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHH---h-----CCcee--c-hHHHHHHHHHhCCCCC
Confidence            789999999 9999999999999999999999987   55444443   2     34444  4 33  123333114689


Q ss_pred             EEEecCCCC
Q 043792          101 GLFYSFEPP  109 (294)
Q Consensus       101 ~Vih~a~~~  109 (294)
                      +||++++..
T Consensus       249 ~vid~~g~~  257 (366)
T 2cdc_A          249 VIIDATGAD  257 (366)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCCCh
Confidence            999999853

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=97.39  E-value=9.4e-05  Score=61.75  Aligned_cols=80  Identities=14%  Similarity=0.050  Sum_probs=52.4

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      ..+++++|||++ .+|+.+++.|++.| +|++++|+.++.+.+.+++...... .. .+..|+.+.   .+.+.++|+||
T Consensus       126 l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~-~~-~~~~d~~~~---~~~~~~~DilV  198 (287)
T 1nvt_A          126 VKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNK-KF-GEEVKFSGL---DVDLDGVDIII  198 (287)
T ss_dssp             CCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTC-CH-HHHEEEECT---TCCCTTCCEEE
T ss_pred             cCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhccc-cc-ceeEEEeeH---HHhhCCCCEEE
Confidence            356899999985 99999999999999 9999999876666655432110000 00 011122221   23456789999


Q ss_pred             ecCCCCC
Q 043792          104 YSFEPPS  110 (294)
Q Consensus       104 h~a~~~~  110 (294)
                      ++++...
T Consensus       199 n~ag~~~  205 (287)
T 1nvt_A          199 NATPIGM  205 (287)
T ss_dssp             ECSCTTC
T ss_pred             ECCCCCC
Confidence            9988644

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=97.39  E-value=0.00014  Score=58.25  Aligned_cols=68  Identities=12%  Similarity=0.174  Sum_probs=49.7

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEE-EecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHA-ALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      +||||.|+| +|.+|+.+++.|.+.|++|++ .+|++++.+.+..++       ++....   .+    .+.++++|+||
T Consensus        22 ~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~-------g~~~~~---~~----~~~~~~aDvVi   86 (220)
T 4huj_A           22 SMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRF-------GASVKA---VE----LKDALQADVVI   86 (220)
T ss_dssp             GSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHH-------TTTEEE---CC----HHHHTTSSEEE
T ss_pred             cCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHh-------CCCccc---Ch----HHHHhcCCEEE
Confidence            367999999 599999999999999999999 788887777665521       111111   11    23367899999


Q ss_pred             ecCC
Q 043792          104 YSFE  107 (294)
Q Consensus       104 h~a~  107 (294)
                      -+..
T Consensus        87 lavp   90 (220)
T 4huj_A           87 LAVP   90 (220)
T ss_dssp             EESC
T ss_pred             EeCC
Confidence            8864

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=97.38  E-value=0.00027  Score=58.88  Aligned_cols=65  Identities=14%  Similarity=0.181  Sum_probs=50.6

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEecC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSF  106 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~a  106 (294)
                      |+|.|+|. |.+|+.+++.|.+.|++|++.+|++++.+.+.+   .     ++..       ..++.++++++|+||-+.
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~---~-----g~~~-------~~~~~~~~~~aDvvi~~v   65 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAA---L-----GAER-------AATPCEVVESCPVTFAML   65 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHH---T-----TCEE-------CSSHHHHHHHCSEEEECC
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH---C-----CCee-------cCCHHHHHhcCCEEEEEc
Confidence            68999996 999999999999999999999999887776665   2     2221       123556667788888776


Q ss_pred             C
Q 043792          107 E  107 (294)
Q Consensus       107 ~  107 (294)
                      .
T Consensus        66 p   66 (287)
T 3pef_A           66 A   66 (287)
T ss_dssp             S
T ss_pred             C
Confidence            5

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=97.38  E-value=0.00068  Score=58.81  Aligned_cols=70  Identities=16%  Similarity=0.139  Sum_probs=55.9

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      .++++|+|+|+ |.+|+.+++.+.+.|++|++++.++......     .     --.++..|..|.+.+.++.+++|+|.
T Consensus        10 ~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~~-----~-----ad~~~~~~~~d~~~l~~~~~~~dvi~   78 (377)
T 3orq_A           10 KFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCRY-----V-----AHEFIQAKYDDEKALNQLGQKCDVIT   78 (377)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTGG-----G-----SSEEEECCTTCHHHHHHHHHHCSEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhhh-----h-----CCEEEECCCCCHHHHHHHHHhCCcce
Confidence            35789999997 8899999999999999999998765432110     1     12467789999999999999999885


Q ss_pred             e
Q 043792          104 Y  104 (294)
Q Consensus       104 h  104 (294)
                      .
T Consensus        79 ~   79 (377)
T 3orq_A           79 Y   79 (377)
T ss_dssp             E
T ss_pred             e
Confidence            5

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=97.38  E-value=0.0017  Score=55.75  Aligned_cols=93  Identities=14%  Similarity=0.184  Sum_probs=54.5

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCC---eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGY---TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ++||.|.||||++|..|++.|.++++   ++..+..+.+.-..+.    +  ....+.+...|.   +    .++++|+|
T Consensus         2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~----~--~~~~~~~~~~~~---~----~~~~~Dvv   68 (366)
T 3pwk_A            2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLK----F--KDQDITIEETTE---T----AFEGVDIA   68 (366)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEE----E--TTEEEEEEECCT---T----TTTTCSEE
T ss_pred             CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcce----e--cCCCceEeeCCH---H----HhcCCCEE
Confidence            57999999999999999999988765   3444432221111100    0  011222322331   1    24689999


Q ss_pred             EecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792          103 FYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus       103 ih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      |-|.+..                .+......+.+. |+ ++|=+|+.
T Consensus        69 f~a~~~~----------------~s~~~a~~~~~~-G~-~vIDlSa~   97 (366)
T 3pwk_A           69 LFSAGSS----------------TSAKYAPYAVKA-GV-VVVDNTSY   97 (366)
T ss_dssp             EECSCHH----------------HHHHHHHHHHHT-TC-EEEECSST
T ss_pred             EECCChH----------------hHHHHHHHHHHC-CC-EEEEcCCc
Confidence            9998621                133445555555 76 67888875

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.38  E-value=0.00055  Score=57.45  Aligned_cols=72  Identities=18%  Similarity=0.194  Sum_probs=54.9

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ...+++|+|+|+ |.+|+.+++.|...|.+|++++|+.++.+.+.+   .     +++.+     +..++.++++++|+|
T Consensus       154 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~---~-----g~~~~-----~~~~l~~~l~~aDvV  219 (300)
T 2rir_A          154 TIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITE---M-----GLVPF-----HTDELKEHVKDIDIC  219 (300)
T ss_dssp             CSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---T-----TCEEE-----EGGGHHHHSTTCSEE
T ss_pred             CCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---C-----CCeEE-----chhhHHHHhhCCCEE
Confidence            456789999997 999999999999999999999998754433332   1     33332     224577888999999


Q ss_pred             EecCCC
Q 043792          103 FYSFEP  108 (294)
Q Consensus       103 ih~a~~  108 (294)
                      |.+...
T Consensus       220 i~~~p~  225 (300)
T 2rir_A          220 INTIPS  225 (300)
T ss_dssp             EECCSS
T ss_pred             EECCCh
Confidence            999775

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=97.37  E-value=0.00079  Score=58.56  Aligned_cols=74  Identities=14%  Similarity=0.003  Sum_probs=54.8

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCC-----------------
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPF-----------------   87 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~-----------------   87 (294)
                      .+++|+|+|+ |-+|..+++.+...|.+|+++++++.+.+...+   +     +.+++..|..                 
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~---~-----Ga~~~~i~~~~~~~~~~~~~~~~~~s~  241 (384)
T 1l7d_A          171 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVES---L-----GGKFITVDDEAMKTAETAGGYAKEMGE  241 (384)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH---T-----TCEECCC--------------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---c-----CCeEEeecccccccccccccchhhcCH
Confidence            5789999997 999999999999999999999999877666554   2     3333211211                 


Q ss_pred             -----ChhHHHHHhccCCEEEecCC
Q 043792           88 -----DYHSLVNALKGCSGLFYSFE  107 (294)
Q Consensus        88 -----~~~~~~~~~~~~d~Vih~a~  107 (294)
                           +.+.+.+.++++|+||+++.
T Consensus       242 ~~~~~~~~~l~~~~~~aDvVi~~~~  266 (384)
T 1l7d_A          242 EFRKKQAEAVLKELVKTDIAITTAL  266 (384)
T ss_dssp             ---CCHHHHHHHHHTTCSEEEECCC
T ss_pred             HHHhhhHHHHHHHhCCCCEEEECCc
Confidence                 12337778889999999983

>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}

Probab=97.37  E-value=0.00036  Score=61.43  Aligned_cols=79  Identities=13%  Similarity=0.129  Sum_probs=54.0

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECC-------------CCChh
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQAD-------------PFDYH   90 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~D-------------l~~~~   90 (294)
                      .+|.+|.|+|. |++|..++..|++.|++|++++.++++.+.+...        ...+.+-+             +.=..
T Consensus        19 ~~m~~IaViGl-GYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G--------~~pi~Epgl~ell~~~~~~g~l~~tt   89 (444)
T 3vtf_A           19 SHMASLSVLGL-GYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAG--------RPHIYEPGLEEALGRALSSGRLSFAE   89 (444)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTT--------CCSSCCTTHHHHHHHHHHTTCEEECS
T ss_pred             CCCCEEEEEcc-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCC--------CCCCCCCCHHHHHHHHHHcCCeeEEc
Confidence            35789999986 9999999999999999999999987776665431        11111111             10011


Q ss_pred             HHHHHhccCCEEEecCCCCCC
Q 043792           91 SLVNALKGCSGLFYSFEPPSD  111 (294)
Q Consensus        91 ~~~~~~~~~d~Vih~a~~~~~  111 (294)
                      +..++++++|++|-|.+.+..
T Consensus        90 ~~~~ai~~ad~~~I~VpTP~~  110 (444)
T 3vtf_A           90 SAEEAVAATDATFIAVGTPPA  110 (444)
T ss_dssp             SHHHHHHTSSEEEECCCCCBC
T ss_pred             CHHHHHhcCCceEEEecCCCC
Confidence            234556788999999776543

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=97.37  E-value=0.00015  Score=60.73  Aligned_cols=66  Identities=14%  Similarity=0.200  Sum_probs=48.8

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEec
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYS  105 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~  105 (294)
                      +|+|.|+|+ |.+|+.+++.|.+.|++|++++|++++.+.+.+   .     ++..       ..++.++++++|+||.+
T Consensus         5 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~---~-----g~~~-------~~~~~~~~~~~D~vi~~   68 (299)
T 1vpd_A            5 TMKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA---A-----GAET-------ASTAKAIAEQCDVIITM   68 (299)
T ss_dssp             -CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH---T-----TCEE-------CSSHHHHHHHCSEEEEC
T ss_pred             cceEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH---C-----CCee-------cCCHHHHHhCCCEEEEE
Confidence            469999995 999999999999999999999988766555544   1     2221       12244556778999888


Q ss_pred             CC
Q 043792          106 FE  107 (294)
Q Consensus       106 a~  107 (294)
                      ..
T Consensus        69 v~   70 (299)
T 1vpd_A           69 LP   70 (299)
T ss_dssp             CS
T ss_pred             CC
Confidence            65

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.36  E-value=0.00061  Score=56.96  Aligned_cols=72  Identities=15%  Similarity=0.215  Sum_probs=54.4

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ...+++|+|+|+ |.+|+.+++.|...|.+|++++|+.++.+.+.+   .     +++.+     +.+++.++++++|+|
T Consensus       152 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~---~-----g~~~~-----~~~~l~~~l~~aDvV  217 (293)
T 3d4o_A          152 TIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIAE---M-----GMEPF-----HISKAAQELRDVDVC  217 (293)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---T-----TSEEE-----EGGGHHHHTTTCSEE
T ss_pred             CCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH---C-----CCeec-----ChhhHHHHhcCCCEE
Confidence            346789999996 999999999999999999999998654433332   2     33332     234577888999999


Q ss_pred             EecCCC
Q 043792          103 FYSFEP  108 (294)
Q Consensus       103 ih~a~~  108 (294)
                      +.+...
T Consensus       218 i~~~p~  223 (293)
T 3d4o_A          218 INTIPA  223 (293)
T ss_dssp             EECCSS
T ss_pred             EECCCh
Confidence            998753

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=97.34  E-value=0.0013  Score=55.13  Aligned_cols=36  Identities=14%  Similarity=0.315  Sum_probs=32.7

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNH   60 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   60 (294)
                      ++++|.|+||.|.+|..+++.|.+.|++|++++|++
T Consensus        20 ~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~   55 (298)
T 2pv7_A           20 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDRED   55 (298)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence            356899999889999999999999999999998875

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=97.34  E-value=0.00072  Score=58.13  Aligned_cols=43  Identities=21%  Similarity=0.283  Sum_probs=36.2

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHH
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEE   68 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~   68 (294)
                      ++|+|.|+|. |.+|..+++.|++.|++|++++|++++.+.+.+
T Consensus        21 ~~mkIgiIGl-G~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~   63 (358)
T 4e21_A           21 QSMQIGMIGL-GRMGADMVRRLRKGGHECVVYDLNVNAVQALER   63 (358)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred             cCCEEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH
Confidence            3579999995 999999999999999999999998766555443

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.34  E-value=0.00029  Score=60.23  Aligned_cols=98  Identities=13%  Similarity=0.121  Sum_probs=65.4

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCCh---hHHHHHhccCC
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDY---HSLVNALKGCS  100 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~---~~~~~~~~~~d  100 (294)
                      ..+++|||+|+ |.+|..+++.+...|.+|+++++++++.+.+++   +     +.+. ..|..+.   +.+.+...++|
T Consensus       163 ~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~---l-----Ga~~-~~d~~~~~~~~~~~~~~~~~d  232 (339)
T 1rjw_A          163 KPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE---L-----GADL-VVNPLKEDAAKFMKEKVGGVH  232 (339)
T ss_dssp             CTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH---T-----TCSE-EECTTTSCHHHHHHHHHSSEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---C-----CCCE-EecCCCccHHHHHHHHhCCCC
Confidence            45689999999 679999999999999999999988766655544   2     2222 2355443   23333335789


Q ss_pred             EEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792          101 GLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus       101 ~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      +||++++...               .....++.++..   .+++.+++.
T Consensus       233 ~vid~~g~~~---------------~~~~~~~~l~~~---G~~v~~g~~  263 (339)
T 1rjw_A          233 AAVVTAVSKP---------------AFQSAYNSIRRG---GACVLVGLP  263 (339)
T ss_dssp             EEEESSCCHH---------------HHHHHHHHEEEE---EEEEECCCC
T ss_pred             EEEECCCCHH---------------HHHHHHHHhhcC---CEEEEeccc
Confidence            9999988421               233445555444   478887653

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.34  E-value=0.00052  Score=58.72  Aligned_cols=75  Identities=13%  Similarity=0.167  Sum_probs=52.5

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCCh-hHHHHHhc--cC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDY-HSLVNALK--GC   99 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~-~~~~~~~~--~~   99 (294)
                      ...+.+|||+||+|.+|..+++.+...|.+|+++ +++++.+.+++   +     +.+.+. +-.+. +.+.+...  ++
T Consensus       148 ~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~---l-----Ga~~i~-~~~~~~~~~~~~~~~~g~  217 (343)
T 3gaz_A          148 VQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRD---L-----GATPID-ASREPEDYAAEHTAGQGF  217 (343)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHH---H-----TSEEEE-TTSCHHHHHHHHHTTSCE
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHH---c-----CCCEec-cCCCHHHHHHHHhcCCCc
Confidence            3457899999999999999999999999999998 66655554444   3     334333 22222 23333333  58


Q ss_pred             CEEEecCC
Q 043792          100 SGLFYSFE  107 (294)
Q Consensus       100 d~Vih~a~  107 (294)
                      |+||++++
T Consensus       218 D~vid~~g  225 (343)
T 3gaz_A          218 DLVYDTLG  225 (343)
T ss_dssp             EEEEESSC
T ss_pred             eEEEECCC
Confidence            99999988

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.33  E-value=0.00045  Score=57.11  Aligned_cols=76  Identities=12%  Similarity=0.095  Sum_probs=52.6

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      ..+++|+|+|+ |.+|+.++..|++.|.+|++++|+.++.+.+.+.+..   ...+..  .|+   +++.+  .++|+||
T Consensus       117 ~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~---~~~~~~--~~~---~~~~~--~~~DivI  185 (272)
T 1p77_A          117 RPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQP---YGNIQA--VSM---DSIPL--QTYDLVI  185 (272)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGG---GSCEEE--EEG---GGCCC--SCCSEEE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccc---cCCeEE--eeH---HHhcc--CCCCEEE
Confidence            45689999998 7899999999999999999999998777777653211   112322  222   11110  3789999


Q ss_pred             ecCCCCC
Q 043792          104 YSFEPPS  110 (294)
Q Consensus       104 h~a~~~~  110 (294)
                      ++.+...
T Consensus       186 n~t~~~~  192 (272)
T 1p77_A          186 NATSAGL  192 (272)
T ss_dssp             ECCCC--
T ss_pred             ECCCCCC
Confidence            9977543

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=97.33  E-value=0.00021  Score=60.60  Aligned_cols=68  Identities=12%  Similarity=0.190  Sum_probs=51.6

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      ..+|+|.|+|. |.+|+.+++.|++.|++|++++|++++.+.+.+   .     ++..       ..++.++++++|+||
T Consensus        29 ~~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~---~-----g~~~-------~~~~~e~~~~aDvVi   92 (320)
T 4dll_A           29 PYARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAA---L-----GATI-------HEQARAAARDADIVV   92 (320)
T ss_dssp             CCCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT---T-----TCEE-------ESSHHHHHTTCSEEE
T ss_pred             cCCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH---C-----CCEe-------eCCHHHHHhcCCEEE
Confidence            35689999987 999999999999999999999998776655543   1     2222       124556677888888


Q ss_pred             ecCC
Q 043792          104 YSFE  107 (294)
Q Consensus       104 h~a~  107 (294)
                      -+..
T Consensus        93 ~~vp   96 (320)
T 4dll_A           93 SMLE   96 (320)
T ss_dssp             ECCS
T ss_pred             EECC
Confidence            7764

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=97.33  E-value=0.00021  Score=64.02  Aligned_cols=42  Identities=12%  Similarity=0.145  Sum_probs=36.7

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHH
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEE   68 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~   68 (294)
                      .|||.|+|+ |++|..++..|++.|++|+++++++++.+.+.+
T Consensus         8 ~~~I~VIG~-G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~   49 (478)
T 2y0c_A            8 SMNLTIIGS-GSVGLVTGACLADIGHDVFCLDVDQAKIDILNN   49 (478)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred             CceEEEECc-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHC
Confidence            489999997 999999999999999999999998776665544

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=97.32  E-value=0.00015  Score=61.09  Aligned_cols=43  Identities=16%  Similarity=0.117  Sum_probs=37.0

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHH
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEE   68 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~   68 (294)
                      ++|+|.|+|. |.+|+.+++.|++.|++|++++|++++.+.+.+
T Consensus         6 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~   48 (303)
T 3g0o_A            6 TDFHVGIVGL-GSMGMGAARSCLRAGLSTWGADLNPQACANLLA   48 (303)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Confidence            4579999986 999999999999999999999998877666554

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=97.32  E-value=0.0003  Score=53.03  Aligned_cols=72  Identities=13%  Similarity=-0.023  Sum_probs=50.4

Q ss_pred             CchHHHHHHHHHHHCCCeEEEEecCCCChhh---HHHHHhhccCCCCeEEEECCCCCh--hHHHHHhc------cCCEEE
Q 043792           35 SGHFASALVRRLLLRGYTVHAALHNHGKLQC---IEEELINYNEEKKLKVFQADPFDY--HSLVNALK------GCSGLF  103 (294)
Q Consensus        35 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---l~~~~~~~~~~~~v~~~~~Dl~~~--~~~~~~~~------~~d~Vi  103 (294)
                      +|.++...++.|.+.|.+|++..|+......   ..+.  ....+.++..+.+|++++  +++.++++      +-|++|
T Consensus        25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~--~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dVLV  102 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKL--VTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDVLV  102 (157)
T ss_dssp             EBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHH--HHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCEEE
T ss_pred             cCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHH--HHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCEEE
Confidence            3578899999999999999988876543221   1221  112234566778999998  88877664      229999


Q ss_pred             ecCCC
Q 043792          104 YSFEP  108 (294)
Q Consensus       104 h~a~~  108 (294)
                      ||+|.
T Consensus       103 nnAgg  107 (157)
T 3gxh_A          103 HCLAN  107 (157)
T ss_dssp             ECSBS
T ss_pred             ECCCC
Confidence            99985

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.31  E-value=0.0009  Score=59.43  Aligned_cols=46  Identities=17%  Similarity=0.117  Sum_probs=39.0

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHH
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEE   68 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~   68 (294)
                      ...+.+|||+||+|.||..++..+...|.+|++++++.++.+.+++
T Consensus       218 ~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~  263 (447)
T 4a0s_A          218 MKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRA  263 (447)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence            3567899999999999999999999999999999987666555544

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=97.31  E-value=0.00086  Score=56.61  Aligned_cols=70  Identities=9%  Similarity=0.050  Sum_probs=50.4

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCC--eEEEEecCCCChhhHHHHHhhccCCCCe-EEEECCCCChhHHHH-HhccC
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGY--TVHAALHNHGKLQCIEEELINYNEEKKL-KVFQADPFDYHSLVN-ALKGC   99 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~~~~~~~~~~~~v-~~~~~Dl~~~~~~~~-~~~~~   99 (294)
                      .+.|+|.|+|. |.+|..+++.|.+.|+  +|++++|+++..+...+   .     ++ .....|      +.+ +++++
T Consensus        31 ~~~~kI~IIG~-G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~---~-----G~~~~~~~~------~~~~~~~~a   95 (314)
T 3ggo_A           31 LSMQNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD---L-----GIIDEGTTS------IAKVEDFSP   95 (314)
T ss_dssp             CSCSEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH---T-----TSCSEEESC------TTGGGGGCC
T ss_pred             cCCCEEEEEee-CHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH---C-----CCcchhcCC------HHHHhhccC
Confidence            34589999995 9999999999999999  99999998765554443   2     21 111222      234 56789


Q ss_pred             CEEEecCCC
Q 043792          100 SGLFYSFEP  108 (294)
Q Consensus       100 d~Vih~a~~  108 (294)
                      |+||-+..+
T Consensus        96 DvVilavp~  104 (314)
T 3ggo_A           96 DFVMLSSPV  104 (314)
T ss_dssp             SEEEECSCG
T ss_pred             CEEEEeCCH
Confidence            999988653

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=97.28  E-value=0.00029  Score=62.86  Aligned_cols=36  Identities=14%  Similarity=0.081  Sum_probs=33.6

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHC-CC-eEEEEecCCC
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLR-GY-TVHAALHNHG   61 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~-g~-~V~~~~r~~~   61 (294)
                      ++|||.|+|+ |++|..++..|++. |+ +|++++++++
T Consensus        17 ~~mkIaVIGl-G~mG~~lA~~la~~~G~~~V~~~D~~~~   54 (478)
T 3g79_A           17 PIKKIGVLGM-GYVGIPAAVLFADAPCFEKVLGFQRNSK   54 (478)
T ss_dssp             SCCEEEEECC-STTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence            3579999997 99999999999999 99 9999999988

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=97.27  E-value=0.0019  Score=55.03  Aligned_cols=93  Identities=13%  Similarity=0.083  Sum_probs=56.7

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCC---CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRG---YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      |+||.|.||+|++|+.+++.|.+++   .+++++....+....      ....+..+.+...|   ++    .++++|+|
T Consensus         3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~------~~~~~~~i~~~~~~---~~----~~~~vDvV   69 (336)
T 2r00_A            3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKT------YRFNGKTVRVQNVE---EF----DWSQVHIA   69 (336)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCE------EEETTEEEEEEEGG---GC----CGGGCSEE
T ss_pred             ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCc------eeecCceeEEecCC---hH----HhcCCCEE
Confidence            5899999999999999999999973   566766532211000      10011123332222   22    23589999


Q ss_pred             EecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792          103 FYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus       103 ih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      |-|.+..                .+......+.+. |+ ++|-.|+.
T Consensus        70 f~a~g~~----------------~s~~~a~~~~~~-G~-~vId~s~~   98 (336)
T 2r00_A           70 LFSAGGE----------------LSAKWAPIAAEA-GV-VVIDNTSH   98 (336)
T ss_dssp             EECSCHH----------------HHHHHHHHHHHT-TC-EEEECSST
T ss_pred             EECCCch----------------HHHHHHHHHHHc-CC-EEEEcCCc
Confidence            9987631                134455555666 76 68888875

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.27  E-value=0.00094  Score=57.88  Aligned_cols=75  Identities=12%  Similarity=-0.005  Sum_probs=50.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHh--ccCCE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNAL--KGCSG  101 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~--~~~d~  101 (294)
                      ..+.+|+|+||+|.+|..+++.+...|.+|++++ +.++.+.+++   +     +.+.+ .|..+.+..+++.  .++|+
T Consensus       182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~---l-----Ga~~v-~~~~~~~~~~~~~~~~g~D~  251 (375)
T 2vn8_A          182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRK---L-----GADDV-IDYKSGSVEEQLKSLKPFDF  251 (375)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHH---T-----TCSEE-EETTSSCHHHHHHTSCCBSE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHH---c-----CCCEE-EECCchHHHHHHhhcCCCCE
Confidence            4578999999999999999999999999999887 4444444433   2     22211 2333332222222  36899


Q ss_pred             EEecCCC
Q 043792          102 LFYSFEP  108 (294)
Q Consensus       102 Vih~a~~  108 (294)
                      ||++++.
T Consensus       252 vid~~g~  258 (375)
T 2vn8_A          252 ILDNVGG  258 (375)
T ss_dssp             EEESSCT
T ss_pred             EEECCCC
Confidence            9999884

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.27  E-value=0.00071  Score=58.38  Aligned_cols=99  Identities=15%  Similarity=0.038  Sum_probs=65.1

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeE-EEECCCCC-hhHHHHHhc--c
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLK-VFQADPFD-YHSLVNALK--G   98 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~-~~~~Dl~~-~~~~~~~~~--~   98 (294)
                      ...+.+|||+| +|.+|...+..+...|.+|+++++++++.+.+++   +     +.+ ++..+-.+ .+.+.++..  +
T Consensus       187 ~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~---l-----Ga~~vi~~~~~~~~~~v~~~~~g~g  257 (363)
T 3uog_A          187 LRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAFA---L-----GADHGINRLEEDWVERVYALTGDRG  257 (363)
T ss_dssp             CCTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---H-----TCSEEEETTTSCHHHHHHHHHTTCC
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHH---c-----CCCEEEcCCcccHHHHHHHHhCCCC
Confidence            34578999999 7999999999999999999999988766665554   3     222 22211112 133444443  5


Q ss_pred             CCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792           99 CSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      +|+||++++...                ....++.++..   .+++.++..
T Consensus       258 ~D~vid~~g~~~----------------~~~~~~~l~~~---G~iv~~G~~  289 (363)
T 3uog_A          258 ADHILEIAGGAG----------------LGQSLKAVAPD---GRISVIGVL  289 (363)
T ss_dssp             EEEEEEETTSSC----------------HHHHHHHEEEE---EEEEEECCC
T ss_pred             ceEEEECCChHH----------------HHHHHHHhhcC---CEEEEEecC
Confidence            899999998321                22345555444   478887654

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.26  E-value=0.00055  Score=59.98  Aligned_cols=73  Identities=21%  Similarity=0.248  Sum_probs=54.6

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ..+++|+|+|+ |.+|+.+++.|...|. +|++++|+.++.+.+...  +     +...  .+   .+++.+.+.++|+|
T Consensus       165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~--~-----g~~~--~~---~~~l~~~l~~aDvV  231 (404)
T 1gpj_A          165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARD--L-----GGEA--VR---FDELVDHLARSDVV  231 (404)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHH--H-----TCEE--CC---GGGHHHHHHTCSEE
T ss_pred             ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH--c-----CCce--ec---HHhHHHHhcCCCEE
Confidence            45789999998 9999999999999998 899999987665444442  1     2232  22   24567777899999


Q ss_pred             EecCCCC
Q 043792          103 FYSFEPP  109 (294)
Q Consensus       103 ih~a~~~  109 (294)
                      |.+.+..
T Consensus       232 i~at~~~  238 (404)
T 1gpj_A          232 VSATAAP  238 (404)
T ss_dssp             EECCSSS
T ss_pred             EEccCCC
Confidence            9997643

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.26  E-value=0.00092  Score=58.41  Aligned_cols=76  Identities=14%  Similarity=0.013  Sum_probs=55.3

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCC-------------Ch--
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPF-------------DY--   89 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~-------------~~--   89 (294)
                      .+++|+|+|+ |-+|..+++.+...|.+|+++++++.+.+.+.+   .     +.+++..|..             +.  
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~---l-----Ga~~~~~~~~~~~~~~~g~~~~~~~~~  241 (401)
T 1x13_A          171 PPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS---M-----GAEFLELDFKEEAGSGDGYAKVMSDAF  241 (401)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHH---T-----TCEECCC--------CCHHHHHHSHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH---c-----CCEEEEecccccccccccchhhccHHH
Confidence            4689999997 999999999999999999999998877665544   2     3444322221             11  


Q ss_pred             -----hHHHHHhccCCEEEecCCCC
Q 043792           90 -----HSLVNALKGCSGLFYSFEPP  109 (294)
Q Consensus        90 -----~~~~~~~~~~d~Vih~a~~~  109 (294)
                           +.+.+.+.++|+||.++..+
T Consensus       242 ~~~~~~~l~e~~~~aDvVI~~~~~p  266 (401)
T 1x13_A          242 IKAEMELFAAQAKEVDIIVTTALIP  266 (401)
T ss_dssp             HHHHHHHHHHHHHHCSEEEECCCCT
T ss_pred             HHHHHHHHHHHhCCCCEEEECCccC
Confidence                 14667777899999996543

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.25  E-value=9.7e-05  Score=61.55  Aligned_cols=42  Identities=21%  Similarity=0.317  Sum_probs=36.2

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHH
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEE   68 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~   68 (294)
                      +++|.|+|+ |.+|+.++..|++.|++|++++|+++..+...+
T Consensus         4 ~~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~   45 (283)
T 4e12_A            4 ITNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKK   45 (283)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence            579999997 999999999999999999999998766554443

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=97.25  E-value=0.00032  Score=58.78  Aligned_cols=66  Identities=14%  Similarity=0.243  Sum_probs=42.8

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEec
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYS  105 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~  105 (294)
                      .+||.++|- |..|+.+++.|++.||+|++++|++++.+.+.+   .     +....       ++..++++++|+||-+
T Consensus         5 s~kIgfIGL-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~---~-----G~~~~-------~s~~e~~~~~dvvi~~   68 (297)
T 4gbj_A            5 SEKIAFLGL-GNLGTPIAEILLEAGYELVVWNRTASKAEPLTK---L-----GATVV-------ENAIDAITPGGIVFSV   68 (297)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHHTTCEEEEC-------CTTTT---T-----TCEEC-------SSGGGGCCTTCEEEEC
T ss_pred             CCcEEEEec-HHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH---c-----CCeEe-------CCHHHHHhcCCceeee
Confidence            368999996 999999999999999999999999877665443   1     22221       1234456677888777


Q ss_pred             CC
Q 043792          106 FE  107 (294)
Q Consensus       106 a~  107 (294)
                      ..
T Consensus        69 l~   70 (297)
T 4gbj_A           69 LA   70 (297)
T ss_dssp             CS
T ss_pred             cc
Confidence            55

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=97.25  E-value=0.0012  Score=56.69  Aligned_cols=33  Identities=12%  Similarity=0.189  Sum_probs=28.0

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEe
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRG-YTVHAAL   57 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~   57 (294)
                      +++||.|.||+|++|+.+++.|.++. .++.++.
T Consensus         3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~   36 (350)
T 2ep5_A            3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVS   36 (350)
T ss_dssp             CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEe
Confidence            35799999999999999999998764 5777775

>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A

Probab=97.24  E-value=0.0022  Score=57.21  Aligned_cols=43  Identities=14%  Similarity=0.174  Sum_probs=38.0

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHH
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEE   68 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~   68 (294)
                      .+|+|.|+|. |.+|..+++.|.+.|++|++.+|++++.+.+.+
T Consensus         3 ~~~kIgiIGl-G~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~   45 (484)
T 4gwg_A            3 AQADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLA   45 (484)
T ss_dssp             CCBSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHH
T ss_pred             CCCEEEEECh-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence            4679999996 999999999999999999999999877766654

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.22  E-value=0.00042  Score=59.42  Aligned_cols=97  Identities=14%  Similarity=0.147  Sum_probs=64.3

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChh---HHHHHhc--c
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYH---SLVNALK--G   98 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~---~~~~~~~--~   98 (294)
                      .+.+|||+|+ |.+|..+++.+...|. +|+++++++++.+.+++   +     +.+.+ .|..+.+   .+.++..  +
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~---~-----Ga~~~-~~~~~~~~~~~v~~~~~g~g  236 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKK---V-----GADYV-INPFEEDVVKEVMDITDGNG  236 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHH---H-----TCSEE-ECTTTSCHHHHHHHHTTTSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH---h-----CCCEE-ECCCCcCHHHHHHHHcCCCC
Confidence            5789999999 9999999999999999 99999998665555544   3     22221 2443322   2333332  5


Q ss_pred             CCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792           99 CSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      +|+||++++..               ......++.++..   .+++.+++.
T Consensus       237 ~D~vid~~g~~---------------~~~~~~~~~l~~~---G~iv~~g~~  269 (348)
T 2d8a_A          237 VDVFLEFSGAP---------------KALEQGLQAVTPA---GRVSLLGLY  269 (348)
T ss_dssp             EEEEEECSCCH---------------HHHHHHHHHEEEE---EEEEECCCC
T ss_pred             CCEEEECCCCH---------------HHHHHHHHHHhcC---CEEEEEccC
Confidence            89999998841               1133445555444   488887764

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=97.22  E-value=0.00042  Score=56.76  Aligned_cols=67  Identities=15%  Similarity=0.170  Sum_probs=49.6

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEec
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYS  105 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~  105 (294)
                      +|+|.|+|+ |.+|+.+++.|.+.|++|.+++|++++.+.+.+.+       ++..       ..++.++++++|+||-+
T Consensus         3 ~m~i~iiG~-G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~-------g~~~-------~~~~~~~~~~~D~Vi~~   67 (259)
T 2ahr_A            3 AMKIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL-------ALPY-------AMSHQDLIDQVDLVILG   67 (259)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH-------TCCB-------CSSHHHHHHTCSEEEEC
T ss_pred             ccEEEEECC-CHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHc-------CCEe-------eCCHHHHHhcCCEEEEE
Confidence            579999995 99999999999999999999999876665554411       1111       12345566789999988


Q ss_pred             CC
Q 043792          106 FE  107 (294)
Q Consensus       106 a~  107 (294)
                      ..
T Consensus        68 v~   69 (259)
T 2ahr_A           68 IK   69 (259)
T ss_dssp             SC
T ss_pred             eC
Confidence            65

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=97.22  E-value=0.0036  Score=50.64  Aligned_cols=194  Identities=15%  Similarity=0.070  Sum_probs=101.6

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHC-CCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----cCC
Q 043792           27 KTVCVMDASGHFASALVRRLLLR-GYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----GCS  100 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----~~d  100 (294)
                      |||.|+|++|.+|+.+++.+.+. ++++.+..+..+..+.+..   .     +.+ +..|++.++...+.+.     +++
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~---~-----~~D-vvIDfT~p~a~~~~~~~a~~~g~~   71 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD---G-----NTE-VVIDFTHPDVVMGNLEFLIDNGIH   71 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH---T-----TCC-EEEECSCTTTHHHHHHHHHHTTCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc---c-----CCc-EEEEccChHHHHHHHHHHHHcCCC
Confidence            58999999999999999999876 8999877655444333322   1     223 4557777766654443     467


Q ss_pred             EEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeC--------CCCCCCCCCCCCCCCCC
Q 043792          101 GLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWN--------NHRDNPTSHDFDERNWS  172 (294)
Q Consensus       101 ~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~--------~~~~~~~~~~~~e~~~~  172 (294)
                      +|+-.-|...      +        ....+.+++++.+++ .+++.+..+ ..-.        ...+.+ ...+.|....
T Consensus        72 ~VigTTG~~~------e--------~~~~l~~aa~~~~~~-~vv~a~N~s-iGv~ll~~l~~~aa~~~~-dieIiE~HH~  134 (245)
T 1p9l_A           72 AVVGTTGFTA------E--------RFQQVESWLVAKPNT-SVLIAPNFA-IGAVLSMHFAKQAARFFD-SAEVIELHHP  134 (245)
T ss_dssp             EEECCCCCCH------H--------HHHHHHHHHHTSTTC-EEEECSCCC-HHHHHHHHHHHHHGGGCS-EEEEEEEECT
T ss_pred             EEEcCCCCCH------H--------HHHHHHHHHHhCCCC-CEEEECCcc-HHHHHHHHHHHHHHhhcC-CEEEEECccc
Confidence            7765554211      1        112344444433233 566666543 1100        000000 1122222211


Q ss_pred             ChhhhhhccchhHhhHHHHHHHHHHHHH-------------------hcCCeEEEEecCceeCCCCCCCCccccccc---
Q 043792          173 DVNLCKKFKLWHGLSKTLAEKTAWALAM-------------------DRGISMVSINGGLVMGPDVTISNPYLKGAA---  230 (294)
Q Consensus       173 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~-------------------~~~~~~~ilrp~~i~G~~~~~~~~~~~~~~---  230 (294)
                      .     +...|-|-++..+|........                   ..++.+..+|-|.+.|.+.   - ++.+..   
T Consensus       135 ~-----K~DaPSGTA~~lae~i~~~~~~~~~~~~~~~~~~~g~r~~~~~~i~i~s~R~g~ivg~h~---V-~f~~~~e~i  205 (245)
T 1p9l_A          135 H-----KADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQE---V-LFGTEGETL  205 (245)
T ss_dssp             T-----CCSSSCHHHHHHHHHHHHHTTTSCCCCCCCCSCCTTTTCEEETTEEEEEEECTTCCEEEE---E-EEEETTEEE
T ss_pred             C-----CCCCCCHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCcceEEEEECCCCCeEEE---E-EEcCCCcEE
Confidence            1     1115677888888776543210                   0257788889888877661   1 122111   


Q ss_pred             cccCCCccccccHHHHHHHHHhhhc
Q 043792          231 EMYEDGVMASVDLRFYVDAHICVFE  255 (294)
Q Consensus       231 ~~~~~~~~~~v~v~D~a~~i~~~~~  255 (294)
                      .+--+....-++..=+..+..|+..
T Consensus       206 ~i~H~a~sR~~Fa~Ga~~Aa~~l~~  230 (245)
T 1p9l_A          206 TIRHDSLDRTSFVPGVLLAVRRIAE  230 (245)
T ss_dssp             EEEEEECSGGGGHHHHHHHHHHGGG
T ss_pred             EEEEEeCchhhhHHHHHHHHHHHhc
Confidence            1111111114456666677777763

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=97.22  E-value=0.00023  Score=61.18  Aligned_cols=82  Identities=16%  Similarity=0.212  Sum_probs=52.9

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      .++|||.|+|+ |.+|..++..|.+.|++|++++|+++..+.+...-......+++.+ ...+.-..++.++++++|+||
T Consensus        27 ~~~mkI~VIGa-G~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l-~~~i~~t~d~~ea~~~aDvVi  104 (356)
T 3k96_A           27 PFKHPIAILGA-GSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPF-PETLKAYCDLKASLEGVTDIL  104 (356)
T ss_dssp             CCCSCEEEECC-SHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCC-CTTEEEESCHHHHHTTCCEEE
T ss_pred             ccCCeEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCcc-CCCeEEECCHHHHHhcCCEEE
Confidence            34579999998 9999999999999999999999987666665541000000011110 001111124566778899999


Q ss_pred             ecCC
Q 043792          104 YSFE  107 (294)
Q Consensus       104 h~a~  107 (294)
                      -+..
T Consensus       105 laVp  108 (356)
T 3k96_A          105 IVVP  108 (356)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            7753

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.21  E-value=0.00051  Score=59.18  Aligned_cols=75  Identities=8%  Similarity=-0.050  Sum_probs=54.3

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHh-ccCCEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNAL-KGCSGL  102 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~-~~~d~V  102 (294)
                      ..+.+|||+|+ |.+|..++..+...|.+|+++++++++.+.+++   +     +.+.+ .|..+..++.+.+ .++|+|
T Consensus       178 ~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~---l-----Ga~~v-~~~~~~~~~~~~~~~~~D~v  247 (360)
T 1piw_A          178 GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK---M-----GADHY-IATLEEGDWGEKYFDTFDLI  247 (360)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH---H-----TCSEE-EEGGGTSCHHHHSCSCEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH---c-----CCCEE-EcCcCchHHHHHhhcCCCEE
Confidence            45789999999 999999999998899999999999888776655   3     22221 2333321233333 478999


Q ss_pred             EecCCC
Q 043792          103 FYSFEP  108 (294)
Q Consensus       103 ih~a~~  108 (294)
                      |.+.+.
T Consensus       248 id~~g~  253 (360)
T 1piw_A          248 VVCASS  253 (360)
T ss_dssp             EECCSC
T ss_pred             EECCCC
Confidence            999885

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.21  E-value=0.0016  Score=53.51  Aligned_cols=64  Identities=16%  Similarity=0.103  Sum_probs=50.0

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEec
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYS  105 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~  105 (294)
                      +++++|+|+ |..|+.++..|.+.|.+|+++.|+.++.+.+.+   +     ++...  ++.+.       .++|+||++
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la~---~-----~~~~~--~~~~l-------~~~DiVIna  179 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQR---L-----GCDCF--MEPPK-------SAFDLIINA  179 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHH---H-----TCEEE--SSCCS-------SCCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---C-----CCeEe--cHHHh-------ccCCEEEEc
Confidence            689999997 999999999999999999999999998887763   3     23333  22221       278999999


Q ss_pred             CC
Q 043792          106 FE  107 (294)
Q Consensus       106 a~  107 (294)
                      -.
T Consensus       180 Tp  181 (269)
T 3phh_A          180 TS  181 (269)
T ss_dssp             CT
T ss_pred             cc
Confidence            44

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.21  E-value=0.00048  Score=56.85  Aligned_cols=73  Identities=15%  Similarity=0.156  Sum_probs=52.6

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~  101 (294)
                      ...+++++|+|+ |.+|+.++..|.+.|. +|++++|+.++.+.+.+++   .. ..+..+  ++.+   +..  .++|+
T Consensus       117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~---~~-~~~~~~--~~~~---l~~--~~~Di  184 (272)
T 3pwz_A          117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNEL---DH-SRLRIS--RYEA---LEG--QSFDI  184 (272)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHH---CC-TTEEEE--CSGG---GTT--CCCSE
T ss_pred             CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHh---cc-CCeeEe--eHHH---hcc--cCCCE
Confidence            345789999998 7899999999999995 9999999988877776632   11 234433  2222   211  57899


Q ss_pred             EEecCC
Q 043792          102 LFYSFE  107 (294)
Q Consensus       102 Vih~a~  107 (294)
                      ||++-.
T Consensus       185 vInaTp  190 (272)
T 3pwz_A          185 VVNATS  190 (272)
T ss_dssp             EEECSS
T ss_pred             EEECCC
Confidence            999943

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.20  E-value=0.00069  Score=56.18  Aligned_cols=73  Identities=15%  Similarity=0.118  Sum_probs=52.2

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ..+++++|+|+ |.+|+.++..|.+.|. +|++++|+.++.+.+.+++..   ...+.....  .+   +   ..++|+|
T Consensus       124 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~---~~~~~~~~~--~~---l---~~~aDiI  191 (281)
T 3o8q_A          124 LKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAA---YGEVKAQAF--EQ---L---KQSYDVI  191 (281)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGG---GSCEEEEEG--GG---C---CSCEEEE
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhc---cCCeeEeeH--HH---h---cCCCCEE
Confidence            45789999998 7899999999999995 999999998877777663211   112444322  11   1   1578999


Q ss_pred             EecCCC
Q 043792          103 FYSFEP  108 (294)
Q Consensus       103 ih~a~~  108 (294)
                      |++-..
T Consensus       192 InaTp~  197 (281)
T 3o8q_A          192 INSTSA  197 (281)
T ss_dssp             EECSCC
T ss_pred             EEcCcC
Confidence            998543

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=97.20  E-value=0.00054  Score=58.89  Aligned_cols=75  Identities=19%  Similarity=0.154  Sum_probs=51.4

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEEC------CCC-ChhHHHHHhcc
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQA------DPF-DYHSLVNALKG   98 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~------Dl~-~~~~~~~~~~~   98 (294)
                      +|||.|+|+ |.+|+.++..|.+.|++|++++|+++..+.+.+   ..    .+.+...      .+. ...++.+++.+
T Consensus         4 ~mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (359)
T 1bg6_A            4 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD---RG----AIIAEGPGLAGTAHPDLLTSDIGLAVKD   75 (359)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH---HT----SEEEESSSCCEEECCSEEESCHHHHHTT
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHh---cC----CeEEeccccccccccceecCCHHHHHhc
Confidence            479999997 999999999999999999999998766665554   10    1111110      110 11235566778


Q ss_pred             CCEEEecCCC
Q 043792           99 CSGLFYSFEP  108 (294)
Q Consensus        99 ~d~Vih~a~~  108 (294)
                      +|+||-+...
T Consensus        76 ~D~vi~~v~~   85 (359)
T 1bg6_A           76 ADVILIVVPA   85 (359)
T ss_dssp             CSEEEECSCG
T ss_pred             CCEEEEeCCc
Confidence            9999988543

>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*

Probab=97.20  E-value=0.0012  Score=56.86  Aligned_cols=70  Identities=14%  Similarity=0.023  Sum_probs=51.5

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCC-CChhHHHHHhccCCEEEe
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADP-FDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl-~~~~~~~~~~~~~d~Vih  104 (294)
                      ||+|+|+|| |..|..++..+.+.|++|++++.+++.....     +     -=+++..|. .|.+.+....+++|.|+-
T Consensus         1 MK~I~ilGg-g~~g~~~~~~Ak~~G~~vv~vd~~~~~~~~~-----~-----aD~~~~~~~~~d~~~~~~~~~~~D~v~~   69 (363)
T 4ffl_A            1 MKTICLVGG-KLQGFEAAYLSKKAGMKVVLVDKNPQALIRN-----Y-----ADEFYCFDVIKEPEKLLELSKRVDAVLP   69 (363)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTTT-----T-----SSEEEECCTTTCHHHHHHHHTSSSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCChhHh-----h-----CCEEEECCCCcCHHHHHHHhcCCCEEEE
Confidence            689999997 8999999999999999999998876543210     0     113455564 456667777788998876


Q ss_pred             cC
Q 043792          105 SF  106 (294)
Q Consensus       105 ~a  106 (294)
                      ..
T Consensus        70 ~~   71 (363)
T 4ffl_A           70 VN   71 (363)
T ss_dssp             CC
T ss_pred             CC
Confidence            53

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=97.20  E-value=0.00038  Score=56.64  Aligned_cols=66  Identities=15%  Similarity=0.201  Sum_probs=50.0

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCC----eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGY----TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~----~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~  101 (294)
                      +|||.|+|+ |.+|+.+++.|++.|+    +|++++|++++.+.+.++  .     ++..       ..+..++++++|+
T Consensus         2 ~~~i~iIG~-G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~--~-----g~~~-------~~~~~e~~~~aDv   66 (247)
T 3gt0_A            2 DKQIGFIGC-GNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEK--Y-----GLTT-------TTDNNEVAKNADI   66 (247)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHH--H-----CCEE-------CSCHHHHHHHCSE
T ss_pred             CCeEEEECc-cHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHH--h-----CCEE-------eCChHHHHHhCCE
Confidence            478999995 9999999999999998    999999988776666541  1     2221       1234456678899


Q ss_pred             EEecC
Q 043792          102 LFYSF  106 (294)
Q Consensus       102 Vih~a  106 (294)
                      ||-+.
T Consensus        67 Vilav   71 (247)
T 3gt0_A           67 LILSI   71 (247)
T ss_dssp             EEECS
T ss_pred             EEEEe
Confidence            99887

>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}

Probab=97.19  E-value=0.00032  Score=62.86  Aligned_cols=41  Identities=17%  Similarity=0.126  Sum_probs=35.2

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHC--CCeEEEEecCCCChhhH
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLR--GYTVHAALHNHGKLQCI   66 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~l   66 (294)
                      ++|||.|+|+ |++|..++..|++.  |++|++++|++++.+.+
T Consensus         8 ~~mkI~VIG~-G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l   50 (481)
T 2o3j_A            8 KVSKVVCVGA-GYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEW   50 (481)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHHHCTTSEEEEECSCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHH
Confidence            3579999997 99999999999998  79999999987665544

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=97.19  E-value=0.00037  Score=56.88  Aligned_cols=67  Identities=22%  Similarity=0.325  Sum_probs=50.6

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      .+ +|+|+|+ |..|+.++..|++.|. +|++++|+.++.+.+.+         .+...     ..+++.+.+.++|+||
T Consensus       108 ~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~---------~~~~~-----~~~~~~~~~~~aDiVI  171 (253)
T 3u62_A          108 KE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDF---------PVKIF-----SLDQLDEVVKKAKSLF  171 (253)
T ss_dssp             CS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCS---------SCEEE-----EGGGHHHHHHTCSEEE
T ss_pred             CC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH---------HcccC-----CHHHHHhhhcCCCEEE
Confidence            45 8999998 8899999999999997 89999998765544332         22221     2345667788999999


Q ss_pred             ecCC
Q 043792          104 YSFE  107 (294)
Q Consensus       104 h~a~  107 (294)
                      ++-.
T Consensus       172 natp  175 (253)
T 3u62_A          172 NTTS  175 (253)
T ss_dssp             ECSS
T ss_pred             ECCC
Confidence            9854

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=97.19  E-value=0.00078  Score=59.01  Aligned_cols=70  Identities=11%  Similarity=0.033  Sum_probs=54.7

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      ++++|+|+|+ |.+|+.+++.+.+.|++|++++ .++.....     .   .+....+.+|..|.+.+.++.+.+|+|+-
T Consensus        23 ~~~~I~ilGg-G~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~-----~---ad~~~~~~~~~~d~~~l~~~a~~~d~i~~   92 (403)
T 3k5i_A           23 NSRKVGVLGG-GQLGRMLVESANRLNIQVNVLD-ADNSPAKQ-----I---SAHDGHVTGSFKEREAVRQLAKTCDVVTA   92 (403)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE-STTCTTGG-----G---CCSSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE-CCCCcHHH-----h---ccccceeecCCCCHHHHHHHHHhCCEEEE
Confidence            3679999998 8999999999999999999999 54332110     1   11224677899999999999999998874

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=97.19  E-value=0.00088  Score=56.67  Aligned_cols=71  Identities=10%  Similarity=-0.000  Sum_probs=47.9

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCC---ChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCC
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHG---KLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCS  100 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~---~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d  100 (294)
                      ++|+|.|+|. |.+|..+++.|++.| ++|++++|+++   +.+...+.+  ..  .++   .. .    ++.++++++|
T Consensus        23 M~m~IgvIG~-G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~--~~--~g~---~~-~----s~~e~~~~aD   89 (317)
T 4ezb_A           23 MMTTIAFIGF-GEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARA--AE--LGV---EP-L----DDVAGIACAD   89 (317)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHH--HH--TTC---EE-E----SSGGGGGGCS
T ss_pred             cCCeEEEECc-cHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHH--HH--CCC---CC-C----CHHHHHhcCC
Confidence            3579999996 999999999999999 99999999863   222222211  00  122   11 0    2334567889


Q ss_pred             EEEecCCC
Q 043792          101 GLFYSFEP  108 (294)
Q Consensus       101 ~Vih~a~~  108 (294)
                      +||-+...
T Consensus        90 vVi~avp~   97 (317)
T 4ezb_A           90 VVLSLVVG   97 (317)
T ss_dssp             EEEECCCG
T ss_pred             EEEEecCC
Confidence            99888654

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=97.19  E-value=0.00063  Score=58.31  Aligned_cols=72  Identities=18%  Similarity=0.065  Sum_probs=54.6

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ...+.+|||+|+ |.+|...+..+...|.+|+++++++++.+.+++   +     +.+.+.   .+.+.+.+   ++|+|
T Consensus       174 ~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~---l-----Ga~~v~---~~~~~~~~---~~D~v  238 (348)
T 3two_A          174 VTKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS---M-----GVKHFY---TDPKQCKE---ELDFI  238 (348)
T ss_dssp             CCTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH---T-----TCSEEE---SSGGGCCS---CEEEE
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh---c-----CCCeec---CCHHHHhc---CCCEE
Confidence            345789999997 999999999999999999999999888877665   3     333222   33333322   79999


Q ss_pred             EecCCCC
Q 043792          103 FYSFEPP  109 (294)
Q Consensus       103 ih~a~~~  109 (294)
                      |++.+..
T Consensus       239 id~~g~~  245 (348)
T 3two_A          239 ISTIPTH  245 (348)
T ss_dssp             EECCCSC
T ss_pred             EECCCcH
Confidence            9998865

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=97.18  E-value=0.00057  Score=57.07  Aligned_cols=65  Identities=9%  Similarity=0.020  Sum_probs=46.8

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEec
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYS  105 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~  105 (294)
                      ||+|.|+|+ |.+|+.+++.|.+.|++|++++ ++++.+.+.+   .     ++.       ...++.++++++|+||-+
T Consensus         3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~---~-----g~~-------~~~~~~~~~~~~D~vi~~   65 (295)
T 1yb4_A            3 AMKLGFIGL-GIMGSPMAINLARAGHQLHVTT-IGPVADELLS---L-----GAV-------NVETARQVTEFADIIFIM   65 (295)
T ss_dssp             -CEEEECCC-STTHHHHHHHHHHTTCEEEECC-SSCCCHHHHT---T-----TCB-------CCSSHHHHHHTCSEEEEC
T ss_pred             CCEEEEEcc-CHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHH---c-----CCc-------ccCCHHHHHhcCCEEEEE
Confidence            479999996 9999999999999999999888 7766655543   1     211       112345556678888877


Q ss_pred             CC
Q 043792          106 FE  107 (294)
Q Consensus       106 a~  107 (294)
                      ..
T Consensus        66 vp   67 (295)
T 1yb4_A           66 VP   67 (295)
T ss_dssp             CS
T ss_pred             CC
Confidence            53

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.18  E-value=0.00077  Score=58.30  Aligned_cols=76  Identities=14%  Similarity=0.126  Sum_probs=55.6

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      ..+.+|||+|+ |.+|...++.+...|.+|+++++++++.+.+++   +     +.+.+ .|..+.+.+.++..++|+||
T Consensus       193 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~---l-----Ga~~v-i~~~~~~~~~~~~~g~Dvvi  262 (369)
T 1uuf_A          193 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA---L-----GADEV-VNSRNADEMAAHLKSFDFIL  262 (369)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH---H-----TCSEE-EETTCHHHHHTTTTCEEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---c-----CCcEE-eccccHHHHHHhhcCCCEEE
Confidence            45789999998 789999999999999999999998877766655   3     22211 24445444444445789999


Q ss_pred             ecCCCC
Q 043792          104 YSFEPP  109 (294)
Q Consensus       104 h~a~~~  109 (294)
                      ++++..
T Consensus       263 d~~g~~  268 (369)
T 1uuf_A          263 NTVAAP  268 (369)
T ss_dssp             ECCSSC
T ss_pred             ECCCCH
Confidence            998853

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=97.18  E-value=0.00088  Score=56.58  Aligned_cols=66  Identities=18%  Similarity=0.209  Sum_probs=49.4

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEec
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYS  105 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~  105 (294)
                      +|+|.|+|+ |.+|+.+++.|.+.|++|++++|+++..+.+.+   .     ++..    ..   +..++++++|+||-+
T Consensus        30 ~~~I~iIG~-G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~---~-----g~~~----~~---~~~~~~~~~DvVi~a   93 (316)
T 2uyy_A           30 DKKIGFLGL-GLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQ---E-----GARL----GR---TPAEVVSTCDITFAC   93 (316)
T ss_dssp             SSCEEEECC-SHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHH---T-----TCEE----CS---CHHHHHHHCSEEEEC
T ss_pred             CCeEEEEcc-cHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH---c-----CCEE----cC---CHHHHHhcCCEEEEe
Confidence            478999996 999999999999999999999998776665544   1     2221    11   244556678888887


Q ss_pred             CC
Q 043792          106 FE  107 (294)
Q Consensus       106 a~  107 (294)
                      ..
T Consensus        94 v~   95 (316)
T 2uyy_A           94 VS   95 (316)
T ss_dssp             CS
T ss_pred             CC
Confidence            65

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.16  E-value=0.0011  Score=55.48  Aligned_cols=36  Identities=19%  Similarity=0.268  Sum_probs=30.5

Q ss_pred             CCCe-EEEeCC-C-----------------chHHHHHHHHHHHCCCeEEEEecCC
Q 043792           25 ATKT-VCVMDA-S-----------------GHFASALVRRLLLRGYTVHAALHNH   60 (294)
Q Consensus        25 ~~~~-vlItGa-t-----------------G~iG~~l~~~L~~~g~~V~~~~r~~   60 (294)
                      .+++ ||||+| |                 |-.|..++++++++|++|+.+.+..
T Consensus        35 ~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~   89 (313)
T 1p9o_A           35 QGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR   89 (313)
T ss_dssp             TTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             cCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence            4566 999865 4                 8899999999999999999998854

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=97.14  E-value=0.00093  Score=59.11  Aligned_cols=82  Identities=13%  Similarity=0.094  Sum_probs=53.8

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEE------EECCCCChhHHHHHhccCC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKV------FQADPFDYHSLVNALKGCS  100 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~------~~~Dl~~~~~~~~~~~~~d  100 (294)
                      .+|.|+|. |++|..++..|++.|++|++++|++++.+.+.... .....+++.-      ..+.+.-..++.++++++|
T Consensus         9 ~~~~vIGl-G~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~-~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aD   86 (446)
T 4a7p_A            9 VRIAMIGT-GYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNV-MPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDAD   86 (446)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTC-CSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCS
T ss_pred             eEEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCC-CCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCC
Confidence            58999997 99999999999999999999999998877664410 0000000000      0000110123556778999


Q ss_pred             EEEecCCCCC
Q 043792          101 GLFYSFEPPS  110 (294)
Q Consensus       101 ~Vih~a~~~~  110 (294)
                      +||-+.+.+.
T Consensus        87 vvii~Vptp~   96 (446)
T 4a7p_A           87 AVFIAVGTPS   96 (446)
T ss_dssp             EEEECCCCCB
T ss_pred             EEEEEcCCCC
Confidence            9999976553

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=97.13  E-value=0.00012  Score=66.37  Aligned_cols=73  Identities=22%  Similarity=0.116  Sum_probs=47.1

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      ..+++++|||| |.+|+.++..|++.|++|+++.|+.++.+.+.+++     ..  +.+.  +.|.+.+  ....+|++|
T Consensus       362 l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~-----~~--~~~~--~~dl~~~--~~~~~DilV  429 (523)
T 2o7s_A          362 LASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAI-----GG--KALS--LTDLDNY--HPEDGMVLA  429 (523)
T ss_dssp             ----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHT-----TC---CEE--TTTTTTC----CCSEEEE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CC--ceee--HHHhhhc--cccCceEEE
Confidence            34678999999 79999999999999999999999877666665521     11  1111  1121111  123579999


Q ss_pred             ecCCC
Q 043792          104 YSFEP  108 (294)
Q Consensus       104 h~a~~  108 (294)
                      |+++.
T Consensus       430 N~agv  434 (523)
T 2o7s_A          430 NTTSM  434 (523)
T ss_dssp             ECSST
T ss_pred             ECCCC
Confidence            99875

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=97.13  E-value=0.0016  Score=56.50  Aligned_cols=69  Identities=14%  Similarity=0.152  Sum_probs=53.9

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEec
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYS  105 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~  105 (294)
                      |++|+|+|+ |.+|+.+++.|.+.|++|++++.++.....  .   .     .-.++..|..|.+.+.+++.++|.|+..
T Consensus         1 M~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~--~---~-----~~~~~~~~~~d~~~l~~~~~~~d~v~~~   69 (380)
T 3ax6_A            1 MKKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRSPAG--Q---V-----ADEQIVAGFFDSERIEDLVKGSDVTTYD   69 (380)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTG--G---G-----SSEEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchh--h---h-----CceEEECCCCCHHHHHHHHhcCCEEEec
Confidence            479999998 899999999999999999999876543211  0   1     1135678999999998888889998864

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=97.13  E-value=0.00044  Score=56.24  Aligned_cols=74  Identities=11%  Similarity=0.123  Sum_probs=49.1

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC--hhh---------HHHHHhhccCCCCeEEEECCCCChhH
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK--LQC---------IEEELINYNEEKKLKVFQADPFDYHS   91 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~---------l~~~~~~~~~~~~v~~~~~Dl~~~~~   91 (294)
                      ...+++|.|+|+ |.+|+.+++.|++.|++|++.+|++++  .+.         +..   +.......        ...+
T Consensus        16 ~~~~~kIgiIG~-G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~--------~~~~   83 (245)
T 3dtt_A           16 YFQGMKIAVLGT-GTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQ---WLPEHPHV--------HLAA   83 (245)
T ss_dssp             ---CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHH---HGGGSTTC--------EEEE
T ss_pred             ccCCCeEEEECC-CHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhH---HHhhcCce--------eccC
Confidence            456789999985 999999999999999999999998654  000         111   11000111        1234


Q ss_pred             HHHHhccCCEEEecCCC
Q 043792           92 LVNALKGCSGLFYSFEP  108 (294)
Q Consensus        92 ~~~~~~~~d~Vih~a~~  108 (294)
                      ..++++++|+||-+...
T Consensus        84 ~~e~~~~aDvVilavp~  100 (245)
T 3dtt_A           84 FADVAAGAELVVNATEG  100 (245)
T ss_dssp             HHHHHHHCSEEEECSCG
T ss_pred             HHHHHhcCCEEEEccCc
Confidence            56677889999998764

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=97.13  E-value=0.0033  Score=54.72  Aligned_cols=71  Identities=11%  Similarity=0.046  Sum_probs=55.0

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      ..+++|+|+|+ |.+|+.+++.+.+.|++|++++.++......     .     .-..+..|..|.+.+.++++++|+|.
T Consensus        12 ~~~k~IlIlG~-G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~-----~-----ad~~~~~~~~d~~~l~~~~~~~dvI~   80 (389)
T 3q2o_A           12 LPGKTIGIIGG-GQLGRMMALAAKEMGYKIAVLDPTKNSPCAQ-----V-----ADIEIVASYDDLKAIQHLAEISDVVT   80 (389)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTTT-----T-----CSEEEECCTTCHHHHHHHHHTCSEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchHH-----h-----CCceEecCcCCHHHHHHHHHhCCEee
Confidence            35689999997 8899999999999999999998765432110     0     11355688999999999999999885


Q ss_pred             ec
Q 043792          104 YS  105 (294)
Q Consensus       104 h~  105 (294)
                      .-
T Consensus        81 ~~   82 (389)
T 3q2o_A           81 YE   82 (389)
T ss_dssp             ES
T ss_pred             ec
Confidence            43

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=97.11  E-value=0.00036  Score=58.47  Aligned_cols=66  Identities=14%  Similarity=0.128  Sum_probs=48.0

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEec
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYS  105 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~  105 (294)
                      +|+|.|+|+ |.+|+.+++.|.+.|++|++++|++++.+.+.+   .     ++..    .   .++.++++++|+||-+
T Consensus         4 ~~~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~---~-----g~~~----~---~~~~~~~~~~D~vi~~   67 (301)
T 3cky_A            4 SIKIGFIGL-GAMGKPMAINLLKEGVTVYAFDLMEANVAAVVA---Q-----GAQA----C---ENNQKVAAASDIIFTS   67 (301)
T ss_dssp             CCEEEEECC-CTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHT---T-----TCEE----C---SSHHHHHHHCSEEEEC
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH---C-----CCee----c---CCHHHHHhCCCEEEEE
Confidence            478999996 999999999999999999999888655544433   1     2321    1   1244556678888888


Q ss_pred             CC
Q 043792          106 FE  107 (294)
Q Consensus       106 a~  107 (294)
                      ..
T Consensus        68 vp   69 (301)
T 3cky_A           68 LP   69 (301)
T ss_dssp             CS
T ss_pred             CC
Confidence            64

>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1

Probab=97.10  E-value=0.0048  Score=51.26  Aligned_cols=90  Identities=18%  Similarity=0.191  Sum_probs=58.1

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCCEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCSGL  102 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~V  102 (294)
                      +.++|+|.|+||..|+.+++.+.+.|++++.... +.....         ...++.+       ..++.++.+  ++|++
T Consensus         6 ~~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~Vn-P~~~g~---------~i~G~~v-------y~sl~el~~~~~~Dv~   68 (288)
T 1oi7_A            6 RETRVLVQGITGREGQFHTKQMLTYGTKIVAGVT-PGKGGM---------EVLGVPV-------YDTVKEAVAHHEVDAS   68 (288)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEEC-TTCTTC---------EETTEEE-------ESSHHHHHHHSCCSEE
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHcCCeEEEEEC-CCCCCc---------eECCEEe-------eCCHHHHhhcCCCCEE
Confidence            4579999999999999999999999998553332 211000         0012222       123455555  78999


Q ss_pred             EecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecC
Q 043792          103 FYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSS  148 (294)
Q Consensus       103 ih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss  148 (294)
                      |.+..+                ..+..+++.|.+. +++.+|.+++
T Consensus        69 Ii~vp~----------------~~~~~~~~ea~~~-Gi~~vVi~t~   97 (288)
T 1oi7_A           69 IIFVPA----------------PAAADAALEAAHA-GIPLIVLITE   97 (288)
T ss_dssp             EECCCH----------------HHHHHHHHHHHHT-TCSEEEECCS
T ss_pred             EEecCH----------------HHHHHHHHHHHHC-CCCEEEEECC
Confidence            977553                2255677777778 8876776654

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=97.10  E-value=0.00053  Score=58.11  Aligned_cols=75  Identities=8%  Similarity=0.029  Sum_probs=53.3

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ...+.+|+|+||+|.+|...+..+...|.+|++++++. +.+.+++   +     +.+. ..|..+.+.+.+.++++|+|
T Consensus       150 ~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~~~~~~~---l-----Ga~~-~i~~~~~~~~~~~~~g~D~v  219 (321)
T 3tqh_A          150 VKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-NHAFLKA---L-----GAEQ-CINYHEEDFLLAISTPVDAV  219 (321)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-HHHHHHH---H-----TCSE-EEETTTSCHHHHCCSCEEEE
T ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-hHHHHHH---c-----CCCE-EEeCCCcchhhhhccCCCEE
Confidence            34578999999999999999999999999999887543 2333333   2     2221 12444444366666889999


Q ss_pred             EecCC
Q 043792          103 FYSFE  107 (294)
Q Consensus       103 ih~a~  107 (294)
                      |++.+
T Consensus       220 ~d~~g  224 (321)
T 3tqh_A          220 IDLVG  224 (321)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99988

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.09  E-value=0.0013  Score=56.40  Aligned_cols=74  Identities=11%  Similarity=0.154  Sum_probs=52.4

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCC--hhHHHHHh-ccCCE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFD--YHSLVNAL-KGCSG  101 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~--~~~~~~~~-~~~d~  101 (294)
                      .+.+|||+||+|.+|...++.+...|.+|+++++++++.+.+++   +     +.+.+ .|..+  .+.+.+.- .++|+
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~---l-----Ga~~v-i~~~~~~~~~~~~~~~~g~Dv  220 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK---M-----GADIV-LNHKESLLNQFKTQGIELVDY  220 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH---H-----TCSEE-ECTTSCHHHHHHHHTCCCEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh---c-----CCcEE-EECCccHHHHHHHhCCCCccE
Confidence            57899999999999999999999999999999987766655554   3     22222 12222  12333331 25899


Q ss_pred             EEecCC
Q 043792          102 LFYSFE  107 (294)
Q Consensus       102 Vih~a~  107 (294)
                      ||++++
T Consensus       221 v~d~~g  226 (346)
T 3fbg_A          221 VFCTFN  226 (346)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999987

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=97.09  E-value=0.00032  Score=58.11  Aligned_cols=72  Identities=17%  Similarity=0.137  Sum_probs=51.3

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      ..+++|+|+|+ |.+|+.+++.|.+.|.+|++++|+.++.+.+.+   .    -++..  .+     ++.+.++++|+||
T Consensus       127 ~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~---~----~g~~~--~~-----~~~~~~~~aDiVi  191 (275)
T 2hk9_A          127 VKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQ---K----FPLEV--VN-----SPEEVIDKVQVIV  191 (275)
T ss_dssp             GGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTT---T----SCEEE--CS-----CGGGTGGGCSEEE
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHH---H----cCCee--eh-----hHHhhhcCCCEEE
Confidence            34689999997 899999999999999999999988655444433   1    02222  11     2344567899999


Q ss_pred             ecCCCCC
Q 043792          104 YSFEPPS  110 (294)
Q Consensus       104 h~a~~~~  110 (294)
                      .+.....
T Consensus       192 ~atp~~~  198 (275)
T 2hk9_A          192 NTTSVGL  198 (275)
T ss_dssp             ECSSTTS
T ss_pred             EeCCCCC
Confidence            9976543

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.08  E-value=0.0011  Score=59.07  Aligned_cols=46  Identities=17%  Similarity=0.125  Sum_probs=39.0

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHH
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEE   68 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~   68 (294)
                      ...+.+|+|+||+|.+|...+..+...|.+|+++++++++.+.+++
T Consensus       226 ~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~  271 (456)
T 3krt_A          226 MKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRA  271 (456)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHh
Confidence            3457899999999999999999999999999999987666665544

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=97.06  E-value=0.00047  Score=60.58  Aligned_cols=82  Identities=7%  Similarity=0.013  Sum_probs=50.6

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeE-EE---ECCCCChhHHHHHhccC
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLK-VF---QADPFDYHSLVNALKGC   99 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~-~~---~~Dl~~~~~~~~~~~~~   99 (294)
                      ..+|||.|+|+ |++|..++..|.+ |++|+++++++++.+.+.... .....+.++ .+   ...+.-..++.++++++
T Consensus        34 ~~~mkIaVIGl-G~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~-~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~a  110 (432)
T 3pid_A           34 SEFMKITISGT-GYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKI-SPIVDKEIQEYLAEKPLNFRATTDKHDAYRNA  110 (432)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTC-CSSCCHHHHHHHHHSCCCEEEESCHHHHHTTC
T ss_pred             cCCCEEEEECc-CHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccC-CccccccHHHHHhhccCCeEEEcCHHHHHhCC
Confidence            34679999996 9999999999887 999999999887666554310 000000000 00   00111112355677899


Q ss_pred             CEEEecCCC
Q 043792          100 SGLFYSFEP  108 (294)
Q Consensus       100 d~Vih~a~~  108 (294)
                      |+||-+...
T Consensus       111 DvViiaVPt  119 (432)
T 3pid_A          111 DYVIIATPT  119 (432)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEEeCCC
Confidence            999988654

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.06  E-value=0.0012  Score=56.10  Aligned_cols=72  Identities=21%  Similarity=0.131  Sum_probs=49.7

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCCh--hHHHHHh-ccCCEEEe
Q 043792           28 TVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDY--HSLVNAL-KGCSGLFY  104 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~--~~~~~~~-~~~d~Vih  104 (294)
                      +|||+||+|.+|..+++.+...|.+|+++++++++.+.+++   +     +.+.+ .|..+.  +.+.++. .++|+||+
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~---l-----Ga~~~-i~~~~~~~~~~~~~~~~~~d~vid  222 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV---L-----GAKEV-LAREDVMAERIRPLDKQRWAAAVD  222 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH---T-----TCSEE-EECC---------CCSCCEEEEEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---c-----CCcEE-EecCCcHHHHHHHhcCCcccEEEE
Confidence            79999999999999999999999999999999887776655   3     22211 133332  1122221 25799999


Q ss_pred             cCCC
Q 043792          105 SFEP  108 (294)
Q Consensus       105 ~a~~  108 (294)
                      +++.
T Consensus       223 ~~g~  226 (328)
T 1xa0_A          223 PVGG  226 (328)
T ss_dssp             CSTT
T ss_pred             CCcH
Confidence            9884

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=97.04  E-value=0.00084  Score=55.71  Aligned_cols=67  Identities=15%  Similarity=0.251  Sum_probs=51.8

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCC---eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGY---TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      +|+|.|+|+ |.+|+.+++.|++.|+   +|++.+|++++.+.+.+   .    -++..       ..+..++++++|+|
T Consensus         3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~---~----~gi~~-------~~~~~~~~~~aDvV   67 (280)
T 3tri_A            3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKE---K----CGVHT-------TQDNRQGALNADVV   67 (280)
T ss_dssp             CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHH---T----TCCEE-------ESCHHHHHSSCSEE
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHH---H----cCCEE-------eCChHHHHhcCCeE
Confidence            578999998 9999999999999998   99999999877766655   1    02322       12345567889999


Q ss_pred             EecCC
Q 043792          103 FYSFE  107 (294)
Q Consensus       103 ih~a~  107 (294)
                      |-+.-
T Consensus        68 ilav~   72 (280)
T 3tri_A           68 VLAVK   72 (280)
T ss_dssp             EECSC
T ss_pred             EEEeC
Confidence            99873

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	294
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	4e-14
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	4e-13
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	5e-11
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	4e-10
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-09
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	2e-08
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	8e-08
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	1e-07
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	2e-07
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-06
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	4e-06
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	6e-06
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	1e-05
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	1e-05
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	5e-05
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	5e-05
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	1e-04
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	1e-04
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	2e-04
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	3e-04
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	0.003

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 69.5 bits (168), Expect = 4e-14
 Identities = 48/281 (17%), Positives = 77/281 (27%), Gaps = 23/281 (8%)

Query: 27  KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADP 86
             V V  A+G  AS +V +LL  GY V     +  KL  +++        +       D 
Sbjct: 12  SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDM 71

Query: 87  FDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFT 146
               +    +KG +G+ +        S   +           N L A A T +V + V T
Sbjct: 72  LKQGAYDEVIKGAAGVAH-IASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLT 130

Query: 147 SSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLW--------HGLSKTLAEKTAW-- 196
           SS  + +           D    N   ++  K             +  SKT AE  AW  
Sbjct: 131 SSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKF 190

Query: 197 ----ALAMDRGISMVSINGGLVMGPDVTISNPY------LKGAAEMYEDG--VMASVDLR 244
                        + +   G +  P+    +          G              V   
Sbjct: 191 MDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAV 250

Query: 245 FYVDAHICVFEDVSSYGRYLCFNHVINCNEDAMKLARMLLP 285
                H+          R +            +   R L P
Sbjct: 251 DIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYP 291

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.2 bits (161), Expect = 4e-13
 Identities = 40/270 (14%), Positives = 83/270 (30%), Gaps = 29/270 (10%)

Query: 27  KTVCVMDASGHFASALVRRLLLRGYTVHAA-LHNHGKLQCIEEELINYNEEKKLKVFQAD 85
           K + +   +G   S L  +L++ G+ V        G+ + +E  + + N E         
Sbjct: 2   KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 61

Query: 86  PFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVF 145
            +     +  L   +        P         T +  T+   N+L    +     +++ 
Sbjct: 62  LYIEVDQIYHLASPASPPNYMYNP-------IKTLKTNTIGTLNMLGLAKRVGA--RLLL 112

Query: 146 TSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGIS 205
            S+ + V       +P  H   E  W  VN        +   K +AE   +A     G+ 
Sbjct: 113 AST-SEVYG-----DPEVHPQSEDYWGHVNPIGPRA-CYDEGKRVAETMCYAYMKQEGVE 165

Query: 206 MVSINGGLVMGPDVTISNPYL----------KGAAEMYEDG--VMASVDLRFYVDAHICV 253
           +         GP + +++  +               +Y  G    A   +   V+  + +
Sbjct: 166 VRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVAL 225

Query: 254 FEDVSSYGRYLCFNHVINCNEDAMKLARML 283
                S    L         E A  +  ++
Sbjct: 226 MNSNVSSPVNLGNPEEHTILEFAQLIKNLV 255

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 60.2 bits (145), Expect = 5e-11
 Identities = 37/202 (18%), Positives = 63/202 (31%), Gaps = 25/202 (12%)

Query: 27  KTVCVMDASGHFASALVRRLLLRGYTVHA-----ALHNHGKLQCIEEELINYNEEKKLKV 81
           K   +   +G   S L   LL +GY VH      +  N  ++  I ++    N   K  +
Sbjct: 2   KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCN--PKFHL 59

Query: 82  FQADPFDYHSLVNALKGCS---GLFYSFEPPSDHSTYD-ELTAEVETMAAHNVLEACAQT 137
              D  D  +L   L+                  S    E TA+V+ M    +LEA    
Sbjct: 60  HYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL 119

Query: 138 NTVDKVVFTSSLTAVVWNNHRDNPTSHD--FDERNWSDVNLCKKFKLWHGLSKTLAEKTA 195
               K  F  + T+ ++   ++ P      F  R+             + ++K  A    
Sbjct: 120 GLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRS------------PYAVAKLYAYWIT 167

Query: 196 WALAMDRGISMVSINGGLVMGP 217
                  G+   +        P
Sbjct: 168 VNYRESYGMYACNGILFNHESP 189

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 57.2 bits (137), Expect = 4e-10
 Identities = 32/194 (16%), Positives = 65/194 (33%), Gaps = 25/194 (12%)

Query: 25  ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQA 84
           A + V +    G   SA+ R+L  RG      L    +L  ++   ++         F +
Sbjct: 1   AKQRVFIAGHRGMVGSAIRRQLEQRGDVEL-VLRTRDELNLLDSRAVH-------DFFAS 52

Query: 85  DPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVV 144
           +  D   +  A     G+  +   P+D             M   N++ A  Q + V+K++
Sbjct: 53  ERIDQ--VYLAAAKVGGIVANNTYPAD-------FIYQNMMIESNIIHAAHQND-VNKLL 102

Query: 145 FTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGI 204
           F  S  + ++      P +     +        +     + ++K    K   +     G 
Sbjct: 103 FLGS--SCIYPKLAKQPMAESELLQGT-----LEPTNEPYAIAKIAGIKLCESYNRQYGR 155

Query: 205 SMVSINGGLVMGPD 218
              S+    + GP 
Sbjct: 156 DYRSVMPTNLYGPH 169

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 56.4 bits (135), Expect = 1e-09
 Identities = 43/272 (15%), Positives = 77/272 (28%), Gaps = 29/272 (10%)

Query: 29  VCVMDASGHFASALVRRLLLRGYTVHAALHNHG----KLQCIEEELINYNEEKKLKVFQA 84
           + V   +G   S  VR+LL   Y    A                 L   + + +L+    
Sbjct: 3   LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHG 62

Query: 85  DPFDYHSLVNALKGCSGLFYSFEPPSDHSTYD--ELTAEVETMAAHNVLEACAQTNTVDK 142
           D  D   L   L+G   + +         +     +  E        +L+         +
Sbjct: 63  DIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGV-GR 121

Query: 143 VVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR 202
           VV  S  T  V+ +         + E +  + N        +  SK  ++  A A     
Sbjct: 122 VVHVS--TNQVYGSIDSGS----WTESSPLEPNSP------YAASKAGSDLVARAYHRTY 169

Query: 203 GISMVSINGGLVMGPD--------VTISNPYLKGAAEMYEDG--VMASVDLRFYVDAHIC 252
           G+ +         GP         + ++N    G   +Y DG  V   V    +      
Sbjct: 170 GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIAL 229

Query: 253 VFEDVSSYGRYLCFNHVINCNEDAMKLARMLL 284
           V     +   Y     +   N +   +    L
Sbjct: 230 VLAGGRAGEIYHIGGGLELTNRELTGILLDSL 261

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.3 bits (124), Expect = 2e-08
 Identities = 34/200 (17%), Positives = 64/200 (32%), Gaps = 20/200 (10%)

Query: 27  KTVCVMDASGHFASALVRRLLLRGYTVHA-----ALHNHGKLQCIEEELINYNEEKKLKV 81
               +   +G   S L   LL +GY VH      +  N G+++ + +     + E  +K+
Sbjct: 2   NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNP-QAHIEGNMKL 60

Query: 82  FQADPFDYHSLVNALKGCSGLFYSFEPPSDHSTY----DELTAEVETMAAHNVLEACAQT 137
              D  D   LV  +               H        E TA+V+ +    +L+A    
Sbjct: 61  HYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC 120

Query: 138 NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWA 197
             ++ V F  + T+ ++   ++ P          S           +G +K  A      
Sbjct: 121 GLINSVKFYQASTSELYGKVQEIPQKETTPFYPRS----------PYGAAKLYAYWIVVN 170

Query: 198 LAMDRGISMVSINGGLVMGP 217
                 +  V+        P
Sbjct: 171 FREAYNLFAVNGILFNHESP 190

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 50.5 bits (120), Expect = 8e-08
 Identities = 27/201 (13%), Positives = 53/201 (26%), Gaps = 25/201 (12%)

Query: 34  ASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLV 93
            +G   SA+VR ++         +        +E  L + +E  +     AD  D   + 
Sbjct: 8   GAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLES-LSDISESNRYNFEHADICDSAEIT 66

Query: 94  NALKGC-----------SGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQT----- 137
              +             S +  S   P           E   +  + +LE   +      
Sbjct: 67  RIFEQYQPDAVMHLAAESHVDRSITGP-------AAFIETNIVGTYALLEVARKYWSALG 119

Query: 138 -NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAW 196
            +  +   F    T  V+ +        +                  +  SK  ++    
Sbjct: 120 EDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVR 179

Query: 197 ALAMDRGISMVSINGGLVMGP 217
           A     G+  +  N     GP
Sbjct: 180 AWRRTYGLPTIVTNCSNNYGP 200

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 50.0 bits (118), Expect = 1e-07
 Identities = 26/210 (12%), Positives = 57/210 (27%), Gaps = 5/210 (2%)

Query: 27  KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADP 86
           KT+ V+ A+G   ++L+R     G+ V A +H+   L   E +         + +FQ   
Sbjct: 4   KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQ-----AIPNVTLFQGPL 58

Query: 87  FDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFT 146
            +   L++ L   + L +                  +       ++    ++  D  ++ 
Sbjct: 59  LNNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYG 118

Query: 147 SSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISM 206
                 +W                 + V        +  L   L +            + 
Sbjct: 119 PWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAP 178

Query: 207 VSINGGLVMGPDVTISNPYLKGAAEMYEDG 236
              +  L          P L    +     
Sbjct: 179 FDPDIPLPWLDAEHDVGPALLQIFKDGPQK 208

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 49.2 bits (116), Expect = 2e-07
 Identities = 31/205 (15%), Positives = 57/205 (27%), Gaps = 22/205 (10%)

Query: 27  KTVCVMDASGHFASALVRRLLLRGYTVHA--ALHNHGKLQCIEEELINYNEEKKLKVFQA 84
           ++  V   +G   + L + LL +GY VH   A  +      + E  I       ++    
Sbjct: 1   RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIE----GDIQYEDG 56

Query: 85  DPFDYHSLVNALKGC----SGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTV 140
           D  D  S+  A+            +             T  V+ +   ++LEA  Q +  
Sbjct: 57  DMADACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPE 116

Query: 141 DKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAM 200
            +    S+              +  F  R+             +G++K            
Sbjct: 117 TRFYQASTSEMFGLIQAERQDENTPFYPRS------------PYGVAKLYGHWITVNYRE 164

Query: 201 DRGISMVSINGGLVMGPDVTISNPY 225
             G+   S        P   I    
Sbjct: 165 SFGLHASSGILFNHESPLRGIEFVT 189

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 46.1 bits (108), Expect = 2e-06
 Identities = 25/203 (12%), Positives = 52/203 (25%), Gaps = 9/203 (4%)

Query: 27  KTVCVMDASGHFASALVRRLLLRGYTVHA----ALHNHGKLQCIEEELINYNEEKKLKVF 82
           K + V   +G   S  V  +      VH      L   G    +E  L       ++++ 
Sbjct: 3   KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAIL-----GDRVELV 57

Query: 83  QADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDK 142
             D  D   +         + +      + ++ ++ +  + T          A      +
Sbjct: 58  VGDIADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIR 117

Query: 143 VVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR 202
               S+         R++   H                   +  +K  ++    A     
Sbjct: 118 FHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF 177

Query: 203 GISMVSINGGLVMGPDVTISNPY 225
           G+     N     GP   I    
Sbjct: 178 GVKATISNCSNNYGPYQHIEKFI 200

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 45.3 bits (106), Expect = 4e-06
 Identities = 40/275 (14%), Positives = 82/275 (29%), Gaps = 36/275 (13%)

Query: 29  VCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFD 88
           + +  A G  AS + RRL   G+ V A+           +   N +  + +   +    D
Sbjct: 18  ISITGAGGFIASHIARRLKHEGHYVIAS-----------DWKKNEHMTEDMFCDEFHLVD 66

Query: 89  YHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHN-----VLEACAQTNTVDKV 143
              + N LK   G+ + F   +D      + +    +  +N      +   A+ N + + 
Sbjct: 67  LRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRF 126

Query: 144 VFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRG 203
            + SS          +       +   W       + +   GL K   E+       D G
Sbjct: 127 FYASSACIYPEFKQLETTNVSLKESDAWPA-----EPQDAFGLEKLATEELCKHYNKDFG 181

Query: 204 ISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMAS---------------VDLRFYVD 248
           I         + GP  T      K  A        ++                 +   V+
Sbjct: 182 IECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVE 241

Query: 249 AHICVFEDVSSYGRYLCFNHVINCNEDAMKLARML 283
             + + +        +  + +++ NE A  +    
Sbjct: 242 GVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFE 276

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 44.8 bits (104), Expect = 6e-06
 Identities = 19/145 (13%), Positives = 49/145 (33%), Gaps = 9/145 (6%)

Query: 27  KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADP 86
             V ++  +G+    +V   +  G+  +            + +++ Y ++   K+ +A  
Sbjct: 4   SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASL 63

Query: 87  FDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFT 146
            D+  LV+ALK    +  +                   +    ++EA  +   + + + +
Sbjct: 64  DDHQRLVDALKQVDVVISALAGGVLSHHI---------LEQLKLVEAIKEAGNIKRFLPS 114

Query: 147 SSLTAVVWNNHRDNPTSHDFDERNW 171
                     H   P S  F ++  
Sbjct: 115 EFGMDPDIMEHALQPGSITFIDKRK 139

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 44.0 bits (102), Expect = 1e-05
 Identities = 34/255 (13%), Positives = 75/255 (29%), Gaps = 19/255 (7%)

Query: 34  ASGHFASALVRRLLLRGYTVHA--ALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHS 91
             G   S L    L +G  +     L   G      + L   +     +    D  + + 
Sbjct: 8   GCGFLGSNLASFALSQGIDLIVFDNLSRKGAT----DNLHWLSSLGNFEFVHGDIRNKND 63

Query: 92  LVNALKGCS---GLFYSFEPPSDHSTYD-ELTAEVETMAAHNVLEACAQTNTVDKVVFTS 147
           +   +           + +     S  +  +  E+      N+LEA  Q N+   ++++S
Sbjct: 64  VTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSS 123

Query: 148 SLTAVVWNNHR----DNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRG 203
           +                      D+ N  D +    F   +G SK  A++     A   G
Sbjct: 124 TNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFG 183

Query: 204 ISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVSSYGRY 263
           ++ V      + G     +                 +V+++  ++    +  +       
Sbjct: 184 LNTVVFRHSSMYGGRQFATYDQ-----GWVGWFCQKAVEIKNGINKPFTISGNGKQVRDV 238

Query: 264 LCFNHVINCNEDAMK 278
           L    +I+    A+ 
Sbjct: 239 LHAEDMISLYFTALA 253

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (99), Expect = 1e-05
 Identities = 23/162 (14%), Positives = 46/162 (28%), Gaps = 14/162 (8%)

Query: 25  ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQA 84
           A K + +  A+G      + + +  GY V   + +  +L        +            
Sbjct: 2   AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHV--------VVG 53

Query: 85  DPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVV 144
           D      +   + G   +       +D S          +  A N++ A      VDKVV
Sbjct: 54  DVLQAADVDKTVAGQDAVIVLLGTRNDLSPTTV-----MSEGARNIVAAMKAHG-VDKVV 107

Query: 145 FTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGL 186
             +S   +              D+       L +    +  +
Sbjct: 108 ACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAV 149

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 42.0 bits (97), Expect = 5e-05
 Identities = 32/199 (16%), Positives = 53/199 (26%), Gaps = 17/199 (8%)

Query: 27  KTVCVMDASGHFASALVRRLLLRGYTVHA-----ALHNHGKLQCIEEELINYNEEKKLKV 81
           K   +   +G   S L   LL +GY VH      +  N  ++  I  +  N N +  +K+
Sbjct: 2   KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVN-KALMKL 60

Query: 82  FQADPFDYHSLVNALKGCS---GLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTN 138
             AD  D  SL   +           + +     S                 L    +++
Sbjct: 61  HYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH 120

Query: 139 TVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWAL 198
           T+D         A         P      E            +  +  SK  A       
Sbjct: 121 TIDSGRTVKYYQAGSSEMFGSTP--PPQSETTPFH------PRSPYAASKCAAHWYTVNY 172

Query: 199 AMDRGISMVSINGGLVMGP 217
               G+   +        P
Sbjct: 173 REAYGLFACNGILFNHESP 191

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 41.4 bits (95), Expect = 5e-05
 Identities = 29/238 (12%), Positives = 59/238 (24%), Gaps = 20/238 (8%)

Query: 27  KTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQA 84
            TV V  ASG     + ++L      +     + +    + I           +  VF  
Sbjct: 4   PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI---------GGEADVFIG 54

Query: 85  DPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVV 144
           D  D  S+  A +G   L              + T            +   Q + +    
Sbjct: 55  DITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWI---- 110

Query: 145 FTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGI 204
                     +  +     H     +    N           +  + ++ A     D G 
Sbjct: 111 ----GQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGT 166

Query: 205 SMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVSSYGR 262
               I  G ++  +  +    L G  +        +V      +  I       +  +
Sbjct: 167 PYTIIRAGGLLDKEGGV-RELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNK 223

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 41.1 bits (95), Expect = 1e-04
 Identities = 32/194 (16%), Positives = 59/194 (30%), Gaps = 18/194 (9%)

Query: 27  KTVCVMDASGHFASALVRRLLLRGYTVHAA-LHNHGKLQCIEE--ELINYNEEKKLKVFQ 83
           K   +   +G   S L+  LL     V        G  + ++E   L++  +    K  Q
Sbjct: 17  KVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQ 76

Query: 84  ADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDE--LTAEVETMAAHNVLEACAQTNTVD 141
            D  +     NA  G   + +     S   + ++   +         N+L A        
Sbjct: 77  GDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQS 136

Query: 142 KVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD 201
                SS     + +H   P   D   +  S           + ++K + E  A   +  
Sbjct: 137 FTYAASS---STYGDHPGLPKVEDTIGKPLS----------PYAVTKYVNELYADVFSRC 183

Query: 202 RGISMVSINGGLVM 215
            G S + +    V 
Sbjct: 184 YGFSTIGLRYFNVF 197

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 40.7 bits (94), Expect = 1e-04
 Identities = 34/201 (16%), Positives = 55/201 (27%), Gaps = 22/201 (10%)

Query: 29  VCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFD 88
           V V   SG+  S    +LL  G+ V   L N    +     +I     K     + D  +
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVI-ILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN 61

Query: 89  YHSLVNALK-----------GCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQT 137
              +   L            G   +  S + P           +        ++ A    
Sbjct: 62  EALMTEILHDHAIDTVIHFAGLKAVGESVQKP-------LEYYDNNVNGTLRLISAMRAA 114

Query: 138 NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWA 197
           N   K    SS   V  +  +             S     K            A+   W+
Sbjct: 115 NV--KNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPD-WS 171

Query: 198 LAMDRGISMVSINGGLVMGPD 218
           +A+ R  + V  +    MG D
Sbjct: 172 IALLRYFNPVGAHPSGDMGED 192

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.6 bits (92), Expect = 2e-04
 Identities = 24/194 (12%), Positives = 52/194 (26%), Gaps = 19/194 (9%)

Query: 27  KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADP 86
               V  A        V+ L   G  V A    +  L  + +E         ++    D 
Sbjct: 6   LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC------PGIEPVCVDL 59

Query: 87  FDYHS---LVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKV 143
            D+ +    +  +     L  +          +      +   + N+      +  V + 
Sbjct: 60  GDWDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARD 119

Query: 144 VFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRG 203
           +    +   + N              N    +  K       L+K +A +          
Sbjct: 120 MINRGVPGSIVNVS---SMVAHVTFPNLITYSSTKGA--MTMLTKAMAMELG-----PHK 169

Query: 204 ISMVSINGGLVMGP 217
           I + S+N  +V+  
Sbjct: 170 IRVNSVNPTVVLTD 183

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 39.4 bits (90), Expect = 3e-04
 Identities = 14/104 (13%), Positives = 35/104 (33%), Gaps = 1/104 (0%)

Query: 27  KTVCVMDASGHFASALVRRLLLRGYTVHAAL-HNHGKLQCIEEELINYNEEKKLKVFQAD 85
             + ++ A+G+    + +  L  G+     +  +       + +L+   +     +    
Sbjct: 4   SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGS 63

Query: 86  PFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHN 129
             D+ SLV A+K    +  +       S  + + A  E      
Sbjct: 64  IDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKR 107

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.7 bits (82), Expect = 0.003
 Identities = 25/195 (12%), Positives = 54/195 (27%), Gaps = 21/195 (10%)

Query: 27  KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADP 86
           + V V  A        V+ L   G  V A       L  +  E         ++    D 
Sbjct: 8   RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC------PGIEPVCVDL 61

Query: 87  FDYHS---LVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKV 143
            D+ +    + ++     L  +          +      +     N+      +  V + 
Sbjct: 62  GDWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARG 121

Query: 144 VFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLW-HGLSKTLAEKTAWALAMDR 202
           +                  S    +R  ++ ++    K     L+K +A +         
Sbjct: 122 LIAR------GVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELG-----PH 170

Query: 203 GISMVSINGGLVMGP 217
            I + ++N  +VM  
Sbjct: 171 KIRVNAVNPTVVMTS 185

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	294
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	100.0
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	100.0
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	100.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	100.0
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	100.0
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	100.0
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	100.0
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	100.0
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	100.0
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.97
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.97
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.97
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.96
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.96
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.96
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.95
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.95
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.94
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.93
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.93
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.93
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.92
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.92
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.92
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.91
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.91
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.91
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.91
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.91
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.91
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.91
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.91
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.91
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.91
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.91
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.91
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.91
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.91
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.9
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.9
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.9
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.9
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.9
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.9
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.9
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.9
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.9
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.89
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.89
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.89
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.89
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.89
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.89
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.89
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.89
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.88
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.88
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.88
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.88
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.88
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.87
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.87
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.87
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.86
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.86
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.86
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.86
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.85
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.85
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.84
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.84
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.83
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.82
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.82
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.81
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.8
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.79
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.77
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.75
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.75
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.69
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.68
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.66
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.64
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.58
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.42
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.83
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.77
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.75
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.74
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.63
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	98.6
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.47
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	98.46
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	98.46
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.45
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	98.44
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	98.43
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	98.39
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	98.38
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	98.31
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	98.28
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	98.27
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	98.23
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.17
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	98.15
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.14
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	98.12
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	98.11
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	98.1
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	98.1
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	98.09
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	98.07
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	98.05
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.98
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.96
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.96
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.95
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.95
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.95
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	97.94
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.92
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.91
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.9
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.87
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.75
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.73
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	97.73
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.71
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.7
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.69
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	97.69
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	97.68
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.67
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.67
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.65
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.65
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.64
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	97.63
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.62
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.58
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.57
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.54
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	97.53
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	97.53
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.51
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.43
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	97.4
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.4
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	97.39
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.38
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	97.37
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.36
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	97.28
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	97.27
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.26
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.26
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	97.18
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.17
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.15
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.1
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	97.07
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	97.0
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	96.98
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	96.97
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.94
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	96.91
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	96.88
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	96.85
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	96.84
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	96.84
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	96.82
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.79
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.75
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.75
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	96.75
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	96.71
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.7
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	96.7
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.69
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.69
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	96.66
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	96.65
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	96.6
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	96.59
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	96.58
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	96.57
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.53
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.53
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	96.52
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	96.51
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.5
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.48
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	96.48
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	96.47
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	96.47
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	96.47
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	96.42
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.42
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.31
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.3
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.28
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	96.28
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	96.27
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	96.24
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	96.23
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.22
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	96.21
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	96.2
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	96.18
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	96.15
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	96.13
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	96.11
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	96.11
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.09
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.08
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	96.06
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	96.05
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	96.04
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	96.02
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	95.9
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	95.85
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.81
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	95.75
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	95.75
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.66
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	95.65
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.64
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	95.62
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.59
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	95.54
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.53
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	95.51
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	95.44
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	95.34
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	95.34
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	95.28
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	95.22
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	95.2
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.16
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	95.09
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	95.07
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	95.0
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	94.99
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	94.98
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	94.91
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	94.91
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	94.82
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	94.81
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	94.72
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.64
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.6
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	94.42
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	94.17
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	94.08
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	94.05
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	94.05
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	94.05
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.04
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.94
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	93.83
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	93.81
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	93.52
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	93.48
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	93.47
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	93.44
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	93.32
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	93.31
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	93.29
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	93.11
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.04
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	92.95
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	92.91
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	92.86
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	92.83
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	92.67
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	92.65
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	92.54
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	92.5
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	92.42
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	92.16
d1k3ta1	190	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.11
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	91.82
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	91.57
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	91.57
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	91.19
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	90.96
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	90.94
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	90.82
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	90.65
d2vapa1	209	Cell-division protein FtsZ {Archaeon Methanococcus	90.65
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	90.65
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	90.45
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.24
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	90.11
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	90.07
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	89.98
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	89.71
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	89.63
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	89.3
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	89.27
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	89.18
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	88.95
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	88.43
d2b4ro1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.12
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	88.01
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.65
d1vkza2	90	Glycinamide ribonucleotide synthetase (GAR-syn), N	87.65
d3coxa1	370	Cholesterol oxidase of GMC family {Brevibacterium	87.58
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	87.45
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	87.43
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	87.32
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	87.16
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	87.13
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	87.02
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	86.94
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	86.85
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	86.8
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	86.79
d3bswa1	193	Acetyltransferase PglD {Campylobacter jejuni [TaxI	86.64
d1m6ia1	213	Apoptosis-inducing factor (AIF) {Human (Homo sapie	86.57
d1uwva2	358	rRNA (Uracil-5-)-methyltransferase RumA, catalytic	86.29
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	86.27
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	86.24
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	86.0
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	85.66
d1lc0a1	172	Biliverdin reductase {Rat (Rattus norvegicus) [Tax	85.66
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	85.5
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	85.49
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	85.48
d2gmha1	380	Electron transfer flavoprotein-ubiquinone oxidored	85.47
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	85.34
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	84.69
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	84.69
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	84.66
d1q7ea_	417	Hypothetical protein YfdW {Escherichia coli [TaxId	83.74
d1np3a2	182	Class I ketol-acid reductoisomerase (KARI) {Pseudo	83.66
d3cmco1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	83.5
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	83.47
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	83.41
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	83.36
d1kdga1	360	Flavoprotein domain of flavocytochrome cellobiose	83.08
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	83.06
d1ps9a2	162	2,4-dienoyl-CoA reductase, C-terminal domain {Esch	82.97
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	82.65
d1h9aa1	195	Glucose 6-phosphate dehydrogenase, N-terminal doma	82.44
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	82.38
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	82.34
d2bs2a2	336	Fumarate reductase {Wolinella succinogenes [TaxId:	82.13
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	82.12
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	81.28
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	81.0
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	80.85
d1rm4a1	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	80.55
d1rq2a1	198	Cell-division protein FtsZ {Mycobacterium tubercul	80.31
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	80.12

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.7e-40  Score=286.60  Aligned_cols=245  Identities=14%  Similarity=0.030  Sum_probs=189.8

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC-----hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccC--
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK-----LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGC--   99 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~--   99 (294)
                      |+|||||||||||++|+++|+++|++|++++|..+.     .+.+..+  ......+++++++|++|.+++.++++++  
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   79 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQD--PHTCNPKFHLHYGDLSDTSNLTRILREVQP   79 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-----------------------CCEEECCCCSSCHHHHHHHHHHHCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhh--hhhcCCCeEEEEeecCCHHHHHHHHhccCC
Confidence            789999999999999999999999999999995432     1222221  1233468999999999999999999864  


Q ss_pred             CEEEecCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChh
Q 043792          100 SGLFYSFEPPSDH--STYDELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVN  175 (294)
Q Consensus       100 d~Vih~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~  175 (294)
                      |+|||+|+.....  ..++...+++|+.||.|++++|++.  ++++||||+||.+  +||...    ..+++|+++..|.
T Consensus        80 d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~--vYG~~~----~~~~~E~~~~~P~  153 (357)
T d1db3a_          80 DEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSE--LYGLVQ----EIPQKETTPFYPR  153 (357)
T ss_dssp             SEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGG--GGTTCC----SSSBCTTSCCCCC
T ss_pred             CEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchh--hhCCCC----CCCcCCCCCCCCC
Confidence            9999999886544  3344578899999999999999987  2345899999985  666554    6689999988776


Q ss_pred             hhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc----------cccccc--cccCCCcc--ccc
Q 043792          176 LCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP----------YLKGAA--EMYEDGVM--ASV  241 (294)
Q Consensus       176 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~----------~~~~~~--~~~~~~~~--~~v  241 (294)
                            ++|+.+|.++|++++.++++++++++++||+++|||.......          ...+..  ..++++..  .|+
T Consensus       154 ------~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~  227 (357)
T d1db3a_         154 ------SPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWG  227 (357)
T ss_dssp             ------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCE
T ss_pred             ------ChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecce
Confidence                  8999999999999999999999999999999999997433221          223333  33455543  499


Q ss_pred             cHHHHHHHHHhhhcCcCCCCeEEe-ecccccHHHHHHHHHHHhCCC
Q 043792          242 DLRFYVDAHICVFEDVSSYGRYLC-FNHVINCNEDAMKLARMLLPP  286 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~  286 (294)
                      |++|+|++++.+++.+. ++.|++ +++.+|+.|+++.+.+.+|..
T Consensus       228 ~v~D~~~a~~~~~~~~~-~~~yni~sg~~~s~~~~~~~~~~~~g~~  272 (357)
T d1db3a_         228 HAKDYVKMQWMMLQQEQ-PEDFVIATGVQYSVRQFVEMAAAQLGIK  272 (357)
T ss_dssp             EHHHHHHHHHHTTSSSS-CCCEEECCCCCEEHHHHHHHHHHTTTEE
T ss_pred             eechHHHHHHHHHhCCC-CCeEEECCCCceehHHHHHHHHHHhCCc
Confidence            99999999999997653 455765 567899999999999988743

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=4.3e-39  Score=275.27  Aligned_cols=245  Identities=18%  Similarity=0.130  Sum_probs=198.1

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEE------EecC--CCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHA------ALHN--HGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG   98 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~------~~r~--~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~   98 (294)
                      |||||||||||||++|++.|+++|++|.+      +++.  ......+..    .....+++++.+|+.+..........
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~~   76 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAP----VDADPRLRFVHGDIRDAGLLARELRG   76 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGG----GTTCTTEEEEECCTTCHHHHHHHTTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhh----hhcCCCeEEEEeccccchhhhccccc
Confidence            68999999999999999999999986544      3332  122222221    23456899999999999999988899


Q ss_pred             CCEEEecCCCCCCCCc--chhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhh
Q 043792           99 CSGLFYSFEPPSDHST--YDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNL  176 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~~--~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~  176 (294)
                      +|.|+|+|+.......  .....+++|+.++.+++++|.+. ++++|||+||.+  +|+...    ..+++|+++..|. 
T Consensus        77 ~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~I~~Ss~~--~yg~~~----~~~~~E~~~~~p~-  148 (322)
T d1r6da_          77 VDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVSTNQ--VYGSID----SGSWTESSPLEPN-  148 (322)
T ss_dssp             CCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGG--GGCCCS----SSCBCTTSCCCCC-
T ss_pred             cceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHc-CCceEEEeecce--eecCCC----CCCCCCCCCCCCC-
Confidence            9999999987654322  22377899999999999999999 899999999986  555554    5589999998887 


Q ss_pred             hhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-------cccccc-cccCCCcc--ccccHHHH
Q 043792          177 CKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-------YLKGAA-EMYEDGVM--ASVDLRFY  246 (294)
Q Consensus       177 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-------~~~~~~-~~~~~~~~--~~v~v~D~  246 (294)
                           +.|+.+|.++|.+++.++++++++++++||++||||++.....       +.++++ .+++++.+  .|+|++|+
T Consensus       149 -----~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~  223 (322)
T d1r6da_         149 -----SPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDH  223 (322)
T ss_dssp             -----SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHH
T ss_pred             -----CHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHH
Confidence                 8999999999999999999999999999999999998654332       344555 56666654  49999999


Q ss_pred             HHHHHhhhcCcCCCCeEEe-ecccccHHHHHHHHHHHhCCCCC
Q 043792          247 VDAHICVFEDVSSYGRYLC-FNHVINCNEDAMKLARMLLPPSD  288 (294)
Q Consensus       247 a~~i~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~  288 (294)
                      |+++..+++++..++.|++ .++.+++.|+++.+.+.++.+.+
T Consensus       224 a~ai~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~  266 (322)
T d1r6da_         224 CRGIALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWS  266 (322)
T ss_dssp             HHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHTCCGG
T ss_pred             HHHHHHHHhCCCCCCeeEEeecccchhHHHHHHHHHHhCCCcc
Confidence            9999999998877667765 45679999999999999997754

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.8e-38  Score=265.54  Aligned_cols=245  Identities=16%  Similarity=0.191  Sum_probs=184.4

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC-ChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG-KLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      +||||||||+||||++|+++|+++|++|+++++... ..+.+..    .....++++...|+.+.     ++.++|+|||
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~----~~~~~~~d~~~~~~~~~-----~~~~~d~Vih   71 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEH----WIGHENFELINHDVVEP-----LYIEVDQIYH   71 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGG----GTTCTTEEEEECCTTSC-----CCCCCSEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHH----hcCCCceEEEehHHHHH-----HHcCCCEEEE
Confidence            479999999999999999999999999999987433 2222222    12334677777776443     4568999999


Q ss_pred             cCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccc
Q 043792          105 SFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL  182 (294)
Q Consensus       105 ~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  182 (294)
                      +|+.....  ..++.+.+++|+.++.+++++|++. ++ |+||+||++  +|+...    ..+++|+......+ ..|.+
T Consensus        72 lAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~-~~-k~I~~SS~~--vy~~~~----~~~~~e~~~~~~~~-~~p~~  142 (312)
T d2b69a1          72 LASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-RLLLASTSE--VYGDPE----VHPQSEDYWGHVNP-IGPRA  142 (312)
T ss_dssp             CCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEEEEGG--GGBSCS----SSSBCTTCCCBCCS-SSTTH
T ss_pred             CcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEEChh--eecCCC----CCCCCccccCCCCC-CCCcc
Confidence            99976532  2344578999999999999999998 76 899999986  455444    33555553322111 11228


Q ss_pred             hhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc---------cccccc-cccCCCcc--ccccHHHHHHHH
Q 043792          183 WHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP---------YLKGAA-EMYEDGVM--ASVDLRFYVDAH  250 (294)
Q Consensus       183 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~---------~~~~~~-~~~~~~~~--~~v~v~D~a~~i  250 (294)
                      +|+.+|.++|.+++.++++++++++++||++||||+......         +..|++ .+++++.+  .|+|++|+++++
T Consensus       143 ~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~  222 (312)
T d2b69a1         143 CYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGL  222 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHH
Confidence            899999999999999999999999999999999998654322         344555 55666554  499999999999


Q ss_pred             HhhhcCcCCCCeEEe-ecccccHHHHHHHHHHHhCCCCCC
Q 043792          251 ICVFEDVSSYGRYLC-FNHVINCNEDAMKLARMLLPPSDT  289 (294)
Q Consensus       251 ~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~  289 (294)
                      +.+++.. .++.|++ +++.+++.++++.+++.++.+.++
T Consensus       223 ~~~~~~~-~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~  261 (312)
T d2b69a1         223 VALMNSN-VSSPVNLGNPEEHTILEFAQLIKNLVGSGSEI  261 (312)
T ss_dssp             HHHHTSS-CCSCEEESCCCEEEHHHHHHHHHHHHTCCCCE
T ss_pred             HHHHhhc-cCCceEecCCcccchhhHHHHHHHHhCCCCce
Confidence            9988655 3456655 567899999999999999877654

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=4.4e-37  Score=266.91  Aligned_cols=243  Identities=16%  Similarity=0.096  Sum_probs=189.8

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      ++|||||||||||||++|+++|+++|++|+++++.......        ......++..+|+.+.+.+.++++++|+|||
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih   85 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT--------EDMFCDEFHLVDLRVMENCLKVTEGVDHVFN   85 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC--------GGGTCSEEEECCTTSHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh--------hhcccCcEEEeechhHHHHHHHhhcCCeEee
Confidence            57899999999999999999999999999999876543211        1113568899999999999999999999999


Q ss_pred             cCCCCCCC---CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCC-------CCCCCCh
Q 043792          105 SFEPPSDH---STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFD-------ERNWSDV  174 (294)
Q Consensus       105 ~a~~~~~~---~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~-------e~~~~~~  174 (294)
                      +|+.....   ..........|+.++.++++++++. ++++||++||..  .|+...    ..+.+       |..+..|
T Consensus        86 ~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~-~vk~~i~~SS~~--~~~~~~----~~~~~~~~~~~~e~~~~~p  158 (363)
T d2c5aa1          86 LAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN-GIKRFFYASSAC--IYPEFK----QLETTNVSLKESDAWPAEP  158 (363)
T ss_dssp             CCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEEEGG--GSCGGG----SSSSSSCEECGGGGSSBCC
T ss_pred             cccccccccccccccccccccccchhhHHHHhHHhh-Cccccccccccc--cccccc----cccccccccccccCCcCCC
Confidence            99876543   2233478899999999999999999 999999999986  444322    21333       3334444


Q ss_pred             hhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-------------cccccccccCCCcc--c
Q 043792          175 NLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-------------YLKGAAEMYEDGVM--A  239 (294)
Q Consensus       175 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-------------~~~~~~~~~~~~~~--~  239 (294)
                      .      ++|+.+|.++|++++.+.++++++++++||+++||+.......             ........++++.+  .
T Consensus       159 ~------~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd  232 (363)
T d2c5aa1         159 Q------DAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRS  232 (363)
T ss_dssp             S------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEEC
T ss_pred             C------CHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEE
Confidence            4      8999999999999999999999999999999999998544332             11111244555544  3


Q ss_pred             cccHHHHHHHHHhhhcCcCCCCeEEe-ecccccHHHHHHHHHHHhCCCCCC
Q 043792          240 SVDLRFYVDAHICVFEDVSSYGRYLC-FNHVINCNEDAMKLARMLLPPSDT  289 (294)
Q Consensus       240 ~v~v~D~a~~i~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~  289 (294)
                      |+|++|++++++.+++.+ .++.|++ +++.+++.++++.+.+..+.+.++
T Consensus       233 ~i~v~D~~~~~~~~~~~~-~~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~i  282 (363)
T d2c5aa1         233 FTFIDECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPI  282 (363)
T ss_dssp             CEEHHHHHHHHHHHHHSS-CCSCEEECCCCCEEHHHHHHHHHHTTTCCCCE
T ss_pred             EeehhHHHHHHHHHHhCC-CCCeEEEecCCcccHHHHHHHHHHHhCCCCce
Confidence            999999999999998765 3455655 667899999999999988877654

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=1.8e-37  Score=268.97  Aligned_cols=247  Identities=13%  Similarity=0.087  Sum_probs=187.2

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC---hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCCE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK---LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCSG  101 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~  101 (294)
                      |||||||||||||++|+++|+++|++|++..++...   ...+..    .....+++++.+|++|...+.++++  ++|+
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~----~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~   76 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSD----ISESNRYNFEHADICDSAEITRIFEQYQPDA   76 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTT----TTTCTTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHh----hhhcCCcEEEEccCCCHHHHHHHHHhCCCCE
Confidence            689999999999999999999999986655443222   122222    2334689999999999999999887  4899


Q ss_pred             EEecCCCCCCCCc--chhhhHhHhhHHHHHHHHHHHhc--------CCCcEEEEecCcceeeeCCCCCCC------CCCC
Q 043792          102 LFYSFEPPSDHST--YDELTAEVETMAAHNVLEACAQT--------NTVDKVVFTSSLTAVVWNNHRDNP------TSHD  165 (294)
Q Consensus       102 Vih~a~~~~~~~~--~~~~~~~~n~~~~~~ll~~~~~~--------~~~~~~v~~Ss~~~~~~~~~~~~~------~~~~  165 (294)
                      |||||+.......  ++...+++|+.++.+++++|++.        .++++|||+||..  +||.....+      ....
T Consensus        77 VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~--vyg~~~~~~~~~~~~~~~~  154 (361)
T d1kewa_          77 VMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDE--VYGDLPHPDEVENSVTLPL  154 (361)
T ss_dssp             EEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGG--GGCCCCCGGGSCTTSCCCC
T ss_pred             EEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccce--eeCCCccCCccccccCCCC
Confidence            9999997653222  23478999999999999999875        1345999999986  555433100      0112


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-------cccccc-cccCCCc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-------YLKGAA-EMYEDGV  237 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-------~~~~~~-~~~~~~~  237 (294)
                      ..|.++..|.      +.||.+|.++|.+++.+..+++++++++||++||||.......       +.+|++ .+++++.
T Consensus       155 ~~e~~~~~p~------s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~  228 (361)
T d1kewa_         155 FTETTAYAPS------SPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGD  228 (361)
T ss_dssp             BCTTSCCCCC------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSC
T ss_pred             cccCCCCCCC------CHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCC
Confidence            2344444444      8899999999999999999999999999999999998654332       445665 5566665


Q ss_pred             c--ccccHHHHHHHHHhhhcCcCCCCeEEee-cccccHHHHHHHHHHHhCC
Q 043792          238 M--ASVDLRFYVDAHICVFEDVSSYGRYLCF-NHVINCNEDAMKLARMLLP  285 (294)
Q Consensus       238 ~--~~v~v~D~a~~i~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~  285 (294)
                      +  .|+|++|+|+++..++++...++.|+++ +.++++.|+++.+.+.++.
T Consensus       229 ~~r~~i~v~D~a~ai~~~~~~~~~~~~~Ni~s~~~~s~~~~~~~i~~~~~~  279 (361)
T d1kewa_         229 QIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDE  279 (361)
T ss_dssp             CEEEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHH
T ss_pred             eEEeCEEHHHHHHHHHHHHhcCCCCCeEEECCCCCcchHHHHhHhhhhccc
Confidence            4  4999999999999999887776678765 4569999999999876643

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=100.00  E-value=1.3e-36  Score=261.78  Aligned_cols=257  Identities=18%  Similarity=0.132  Sum_probs=192.3

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      .++++||||||+||||++|++.|+++|++|++++|+.++...+..............++.+|+.|.+.+.+++.++|+|+
T Consensus         9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~   88 (342)
T d1y1pa1           9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA   88 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred             CCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhh
Confidence            35799999999999999999999999999999999876655544321122223345567899999999999999999999


Q ss_pred             ecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCCh---------
Q 043792          104 YSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDV---------  174 (294)
Q Consensus       104 h~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~---------  174 (294)
                      |+++....... ....++.|+.|+.+++++|.+.+++++|||+||+.+..++...  ......+|+.+...         
T Consensus        89 ~~a~~~~~~~~-~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~  165 (342)
T d1y1pa1          89 HIASVVSFSNK-YDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPN--VEGIYLDEKSWNLESIDKAKTLP  165 (342)
T ss_dssp             ECCCCCSCCSC-HHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTT--CCCCEECTTCCCHHHHHHHHHSC
T ss_pred             hhccccccccc-ccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCC--CCCcccccccccccccccccccc
Confidence            99998765443 4477889999999999999987679999999998654443322  11223333332111         


Q ss_pred             -hhhhhccchhHhhHHHHHHHHHHHHHhc--CCeEEEEecCceeCCCCCCCCc----------cccccc--cccCCCccc
Q 043792          175 -NLCKKFKLWHGLSKTLAEKTAWALAMDR--GISMVSINGGLVMGPDVTISNP----------YLKGAA--EMYEDGVMA  239 (294)
Q Consensus       175 -~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ilrp~~i~G~~~~~~~~----------~~~~~~--~~~~~~~~~  239 (294)
                       .....+.++|+.+|..+|++++.|.+++  +++++++||+++|||.......          +++|..  ...+++...
T Consensus       166 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~  245 (342)
T d1y1pa1         166 ESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQY  245 (342)
T ss_dssp             TTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEE
T ss_pred             ccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccCCcccee
Confidence             1111222789999999999999998876  4889999999999986432221          334443  223455556


Q ss_pred             cccHHHHHHHHHhhhcCcCCCCe-EEeecccccHHHHHHHHHHHh
Q 043792          240 SVDLRFYVDAHICVFEDVSSYGR-YLCFNHVINCNEDAMKLARML  283 (294)
Q Consensus       240 ~v~v~D~a~~i~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~  283 (294)
                      |+|++|+|++++.+++++...+. |+.+++.+++.|+++.+.+.+
T Consensus       246 ~v~v~Dva~~~i~~l~~~~~~g~~~~~~~~~~t~~eia~~i~k~~  290 (342)
T d1y1pa1         246 YVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLY  290 (342)
T ss_dssp             EEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHC
T ss_pred             eeeHHHHHHHHHHhhcCccccceEEEEcCCceEHHHHHHHHHHHc
Confidence            99999999999999988777776 566778899999999998876

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=2.5e-36  Score=259.95  Aligned_cols=248  Identities=15%  Similarity=0.056  Sum_probs=197.1

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC-hhh---HHHHHhhccCCCCeEEEECCCCChhHHHHHhccCC
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK-LQC---IEEELINYNEEKKLKVFQADPFDYHSLVNALKGCS  100 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~---l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d  100 (294)
                      ++|+|||||||||||++|+++|+++|++|++++|.... ...   +... .......+++++.+|+.|...+.......+
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~   93 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSL-VSEKQWSNFKFIQGDIRNLDDCNNACAGVD   93 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHH-SCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHh-hhhcccCCeeEEeecccccccccccccccc
Confidence            35799999999999999999999999999999984432 221   1110 001123478999999999999998889999


Q ss_pred             EEEecCCCCCCC--CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhh
Q 043792          101 GLFYSFEPPSDH--STYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCK  178 (294)
Q Consensus       101 ~Vih~a~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~  178 (294)
                      .|+|+++.....  ..+....+++|+.|+.+++++|.+. ++++|||+||.+  +||...    ..+++|+++..|.   
T Consensus        94 ~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-~~~~~i~~SS~~--vyg~~~----~~~~~E~~~~~p~---  163 (341)
T d1sb8a_          94 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYAASSS--TYGDHP----GLPKVEDTIGKPL---  163 (341)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGG--GGTTCC----CSSBCTTCCCCCC---
T ss_pred             ccccccccccccccccCccchhheeehhHHHHHHHHHhc-CCceEEEcccce--eeCCCC----CCCccCCCCCCCC---
Confidence            999998865532  2223478999999999999999999 899999999996  566555    5589999998887   


Q ss_pred             hccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-----------cccccc-cccCCCcc--ccccHH
Q 043792          179 KFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-----------YLKGAA-EMYEDGVM--ASVDLR  244 (294)
Q Consensus       179 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-----------~~~~~~-~~~~~~~~--~~v~v~  244 (294)
                         +.|+.+|.++|.+++.+.++.+++++++||++|||+.......           ++.|++ .+++++.+  .|+|++
T Consensus       164 ---~~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~  240 (341)
T d1sb8a_         164 ---SPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIE  240 (341)
T ss_dssp             ---SHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHH
T ss_pred             ---CcchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEe
Confidence               8999999999999999999999999999999999998654322           344555 56666554  499999


Q ss_pred             HHHHHHHhhhcCcCC-CC-eEEee-cccccHHHHHHHHHHHhCCC
Q 043792          245 FYVDAHICVFEDVSS-YG-RYLCF-NHVINCNEDAMKLARMLLPP  286 (294)
Q Consensus       245 D~a~~i~~~~~~~~~-~~-~~~~~-~~~~s~~~~~~~~~~~~~~~  286 (294)
                      |+|.++..++..... .+ .|+++ ++.+++.|+++.+.+.++.+
T Consensus       241 D~~~a~~~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~  285 (341)
T d1sb8a_         241 NTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAEN  285 (341)
T ss_dssp             HHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHT
T ss_pred             ccchhhhhhhhccccccceeeeecccccchHHHHHHHHHHHhccc
Confidence            999999998876433 33 57665 46799999999999888744

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=1e-36  Score=262.88  Aligned_cols=249  Identities=13%  Similarity=0.087  Sum_probs=192.0

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC----ChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCC
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG----KLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCS  100 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~----~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d  100 (294)
                      +||||||||||||||++|+++|+++|++|.++.++.-    ....+.     .....+++++.+|+.|.+.+.+++.+++
T Consensus         1 ~~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~-----~~~~~~i~~~~~Di~d~~~~~~~~~~~~   75 (346)
T d1oc2a_           1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLE-----AILGDRVELVVGDIADAELVDKLAAKAD   75 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTG-----GGCSSSEEEEECCTTCHHHHHHHHTTCS
T ss_pred             CcCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHH-----HhhcCCeEEEEccCCCHHHHHHHHhhhh
Confidence            4799999999999999999999999988766655321    111111     1234689999999999999999999999


Q ss_pred             EEEecCCCCCCCC--cchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCC--------CCCCCCCCCCC
Q 043792          101 GLFYSFEPPSDHS--TYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRD--------NPTSHDFDERN  170 (294)
Q Consensus       101 ~Vih~a~~~~~~~--~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~--------~~~~~~~~e~~  170 (294)
                      .|+|+|+......  .++...+++|+.++.++++++... +. ++|++||++  +|+....        .......+|++
T Consensus        76 ~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~-~~-k~i~~ss~~--vyg~~~~~~~~~~~~~~~~~~~~e~~  151 (346)
T d1oc2a_          76 AIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-DI-RFHHVSTDE--VYGDLPLREDLPGHGEGPGEKFTAET  151 (346)
T ss_dssp             EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGG--GGCCBCCGGGSTTTTCSTTSSBCTTS
T ss_pred             hhhhhhhcccccchhhCcccceeeehHhHHhhhhhhccc-cc-cccccccce--EecccCccccccccccCcccccccCC
Confidence            9999998766432  223478899999999999999988 74 789999886  4443210        01122455555


Q ss_pred             CCChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-------cccccc-cccCCCccc--c
Q 043792          171 WSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-------YLKGAA-EMYEDGVMA--S  240 (294)
Q Consensus       171 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-------~~~~~~-~~~~~~~~~--~  240 (294)
                      +..|.      +.||.+|.++|.+++.++.+.+++++++||+++|||.......       ...+.. .+++++...  |
T Consensus       152 ~~~p~------s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~  225 (346)
T d1oc2a_         152 NYNPS------SPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDW  225 (346)
T ss_dssp             CCCCC------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEEC
T ss_pred             CCCCC------CHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccc
Confidence            55555      8999999999999999999999999999999999998544332       233444 556665544  9


Q ss_pred             ccHHHHHHHHHhhhcCcCCCCeEE-eecccccHHHHHHHHHHHhCCCCC
Q 043792          241 VDLRFYVDAHICVFEDVSSYGRYL-CFNHVINCNEDAMKLARMLLPPSD  288 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~~~~  288 (294)
                      +|++|+|++++.++..+..++.|+ ..++..++.++++.+.+.++....
T Consensus       226 i~v~D~a~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  274 (346)
T d1oc2a_         226 IHTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKD  274 (346)
T ss_dssp             EEHHHHHHHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTT
T ss_pred             cchhhHHHHHHHHHhhcccCccccccccccccchHHHHHHHHHhCCCCc
Confidence            999999999999998887777764 566789999999999999987643

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-36  Score=258.96  Aligned_cols=248  Identities=15%  Similarity=0.055  Sum_probs=189.1

Q ss_pred             CeE-EEeCCCchHHHHHHHHHHHCCCeEEEEecCCCCh-----hhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--c
Q 043792           27 KTV-CVMDASGHFASALVRRLLLRGYTVHAALHNHGKL-----QCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--G   98 (294)
Q Consensus        27 ~~v-lItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~   98 (294)
                      ||| ||||||||||++|+++|+++||+|++++|..+..     +.+.... ......+++++.+|++|.+.+..++.  +
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   79 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNP-QAHIEGNMKLHYGDLTDSTCLVKIINEVK   79 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCHHHHHHHHHHHC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhch-hhhccCCcEEEEeecCCchhhHHHHhhcc
Confidence            578 9999999999999999999999999999965421     1111100 11123478999999999999999986  4


Q ss_pred             CCEEEecCCCCCCCCc--chhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCCh
Q 043792           99 CSGLFYSFEPPSDHST--YDELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDV  174 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~~--~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~  174 (294)
                      +++|+|+++.......  .....+++|+.++.++++++++.  .+.++|||+||.+  +||...    ..+++|+++..|
T Consensus        80 ~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~--vyg~~~----~~~~~E~~~~~P  153 (347)
T d1t2aa_          80 PTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSE--LYGKVQ----EIPQKETTPFYP  153 (347)
T ss_dssp             CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGG--GTCSCS----SSSBCTTSCCCC
T ss_pred             cceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchh--eecCCC----CCCCCCCCCCCC
Confidence            6899999886553322  22366799999999999999987  1335899999985  566544    668999998887


Q ss_pred             hhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-----------cccccc-cccCCCcc--cc
Q 043792          175 NLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-----------YLKGAA-EMYEDGVM--AS  240 (294)
Q Consensus       175 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-----------~~~~~~-~~~~~~~~--~~  240 (294)
                      .      ++||.||.++|++++.+.++++++++++||+++|||.......           ...+.+ ..++++.+  .|
T Consensus       154 ~------~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~  227 (347)
T d1t2aa_         154 R------SPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDW  227 (347)
T ss_dssp             C------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECC
T ss_pred             C------CHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeee
Confidence            7      8999999999999999999999999999999999997443321           112222 44556544  49


Q ss_pred             ccHHHHHHHHHhhhcCcCCCCeEEeecccccHHHHHHHHHHHhCCCC
Q 043792          241 VDLRFYVDAHICVFEDVSSYGRYLCFNHVINCNEDAMKLARMLLPPS  287 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~  287 (294)
                      +|++|+++++..++++......++......++.+....+...++...
T Consensus       228 i~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (347)
T d1t2aa_         228 GHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTI  274 (347)
T ss_dssp             EEHHHHHHHHHHHHHSSSCCCEEECCSCCEEHHHHHHHHHHHTTCCE
T ss_pred             eEecHHHHHHHHHhhcCCCccceeccccccccchhhhhhhhhhccee
Confidence            99999999999999876543334556677899999999988887754

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=1.6e-35  Score=252.66  Aligned_cols=244  Identities=14%  Similarity=0.021  Sum_probs=190.7

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC--hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc--CCEE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK--LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG--CSGL  102 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~V  102 (294)
                      |+|||||||||||++|+++|+++||+|++++|..+.  ...+..   . ...++++++.+|+.|...+.+.+..  .+++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~---~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   76 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRE---L-GIEGDIQYEDGDMADACSVQRAVIKAQPQEV   76 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHH---T-TCGGGEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHH---h-cccCCcEEEEccccChHHhhhhhcccccccc
Confidence            689999999999999999999999999999996543  233333   2 2345799999999999999988864  5788


Q ss_pred             EecCCCCCCCC--cchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhc
Q 043792          103 FYSFEPPSDHS--TYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKF  180 (294)
Q Consensus       103 ih~a~~~~~~~--~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~  180 (294)
                      +|+++......  .+....++.|+.|+.+++++|++.+..++|++.||..  +|+...    ....+|+++..+.     
T Consensus        77 ~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~--~~~~~~----~~~~~E~~~~~p~-----  145 (321)
T d1rpna_          77 YNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSE--MFGLIQ----AERQDENTPFYPR-----  145 (321)
T ss_dssp             EECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGG--GGCSCS----SSSBCTTSCCCCC-----
T ss_pred             ccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchh--hcCccc----CCCCCCCCCcccc-----
Confidence            88877654332  2234778999999999999999983345677777764  556555    5578899888877     


Q ss_pred             cchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc----------ccccc-c-cccCCCcc--ccccHHHH
Q 043792          181 KLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP----------YLKGA-A-EMYEDGVM--ASVDLRFY  246 (294)
Q Consensus       181 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~----------~~~~~-~-~~~~~~~~--~~v~v~D~  246 (294)
                       +.|+.+|.++|++++.+..+++++++++||+++|||.......          ...+. + ..++++.+  .|+|++|+
T Consensus       146 -~~Y~~sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~  224 (321)
T d1rpna_         146 -SPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDY  224 (321)
T ss_dssp             -SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHH
T ss_pred             -ChhHHHHHHHHHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHH
Confidence             8999999999999999999999999999999999997443321          12223 2 33566554  49999999


Q ss_pred             HHHHHhhhcCcCCCCeE-EeecccccHHHHHHHHHHHhCCCC
Q 043792          247 VDAHICVFEDVSSYGRY-LCFNHVINCNEDAMKLARMLLPPS  287 (294)
Q Consensus       247 a~~i~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~  287 (294)
                      |+++..+++++.. +.| +.+++..++.++++.+.+..+.+.
T Consensus       225 ~~~~~~~~~~~~~-~~~ni~~~~~~s~~~~~~~~~~~~~~~~  265 (321)
T d1rpna_         225 VEAMWLMLQQDKA-DDYVVATGVTTTVRDMCQIAFEHVGLDY  265 (321)
T ss_dssp             HHHHHHHHHSSSC-CCEEECCSCEEEHHHHHHHHHHTTTCCG
T ss_pred             HHHHHHHHhcCCc-CCceecccccceehhhhHHHHHHhCCCc
Confidence            9999999987754 445 556678999999999999888764

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.9e-35  Score=254.14  Aligned_cols=248  Identities=14%  Similarity=0.047  Sum_probs=181.9

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCCh-hhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCCEEE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKL-QCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCSGLF  103 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~Vi  103 (294)
                      |||||||||||||++|++.|+++|++|++++|..... ..+...  ......+++++++|++|.+.+.++++  ++|+||
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vi   78 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVI--ERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVI   78 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHH--HHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHH--HhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEE
Confidence            6899999999999999999999999999998743222 111110  01123589999999999999999998  689999


Q ss_pred             ecCCCCCCCC--cchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCC-CCChhhhhhc
Q 043792          104 YSFEPPSDHS--TYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERN-WSDVNLCKKF  180 (294)
Q Consensus       104 h~a~~~~~~~--~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~-~~~~~~~~~~  180 (294)
                      |+|+......  .++...+++|+.|+.+++++|++. ++++||++||.+  +|+...    ..+..|.. ...|.     
T Consensus        79 HlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~-~v~~~i~~Ss~~--vy~~~~----~~~~~e~~~~~~p~-----  146 (338)
T d1udca_          79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFSSSAT--VYGDQP----KIPYVESFPTGTPQ-----  146 (338)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGG--GGCSCC----SSSBCTTSCCCCCS-----
T ss_pred             ECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHh-CCCEEEecCcce--EEcccc----ccccccccccCCCc-----
Confidence            9999754322  233488999999999999999999 999999999986  444333    22333333 33444     


Q ss_pred             cchhHhhHHHHHHHHHHHHHh-cCCeEEEEecCceeCCCCCCCC---------c--------ccc-ccc-cccC------
Q 043792          181 KLWHGLSKTLAEKTAWALAMD-RGISMVSINGGLVMGPDVTISN---------P--------YLK-GAA-EMYE------  234 (294)
Q Consensus       181 ~~~Y~~sK~~~e~~~~~~~~~-~~~~~~ilrp~~i~G~~~~~~~---------~--------~~~-~~~-~~~~------  234 (294)
                       .+|+.+|.++|.++..+..+ .+++++++|++++||+......         .        ... +.+ .+++      
T Consensus       147 -~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~  225 (338)
T d1udca_         147 -SPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTE  225 (338)
T ss_dssp             -SHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSST
T ss_pred             -chHHHHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccC
Confidence             88999999999999976665 4899999999999999753211         0        111 111 2222      


Q ss_pred             CCc--cccccHHHHHHHHHhhhcCcCCC--C-eEEeec-ccccHHHHHHHHHHHhCCCCCC
Q 043792          235 DGV--MASVDLRFYVDAHICVFEDVSSY--G-RYLCFN-HVINCNEDAMKLARMLLPPSDT  289 (294)
Q Consensus       235 ~~~--~~~v~v~D~a~~i~~~~~~~~~~--~-~~~~~~-~~~s~~~~~~~~~~~~~~~~~~  289 (294)
                      ++.  ..|+|++|++.++..++......  + .|++++ +++++.|+++.+.+.+|.+.++
T Consensus       226 ~g~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~~~  286 (338)
T d1udca_         226 DGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNY  286 (338)
T ss_dssp             TSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCCCE
T ss_pred             CCCceeeEEEEeehhhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCCce
Confidence            233  23999999999887776543322  2 376654 6799999999999999977654

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.8e-35  Score=252.54  Aligned_cols=248  Identities=16%  Similarity=0.185  Sum_probs=184.0

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHH-HhccCCEEEe
Q 043792           27 KTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVN-ALKGCSGLFY  104 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~-~~~~~d~Vih  104 (294)
                      |||||||||||||++|+++|+++| ++|+++++.......+.       ..++++++.+|+++.+++.+ +++++|+|||
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~-------~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih   73 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIHSEWIEYHVKKCDVVLP   73 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-------TCTTEEEEECCTTTCSHHHHHHHHHCSEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc-------cCCCeEEEECccCChHHHHHHHHhCCCcccc
Confidence            689999999999999999999999 58999988654433322       24689999999998766654 6678999999


Q ss_pred             cCCCCCCCCcc--hhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChh-hhhhcc
Q 043792          105 SFEPPSDHSTY--DELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVN-LCKKFK  181 (294)
Q Consensus       105 ~a~~~~~~~~~--~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~~  181 (294)
                      +|+........  ....++.|+.++.++++++.+. ++ ++++.||+.  +|+...    .....|.....+. +...+.
T Consensus        74 ~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~-~~-~~~~~ss~~--~~~~~~----~~~~~~~~~~~~~~~~~~p~  145 (342)
T d2blla1          74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-RK-RIIFPSTSE--VYGMCS----DKYFDEDHSNLIVGPVNKPR  145 (342)
T ss_dssp             CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-TC-EEEEECCGG--GGBTCC----CSSBCTTTCCCBCCCTTCGG
T ss_pred             ccccccccccccCCccccccccccccccccccccc-cc-ccccccccc--cccccc----ccccccccccccccccCCCc
Confidence            99976643222  2377899999999999999998 76 566788875  444333    2233333222211 112223


Q ss_pred             chhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc---------------cccccc-cccCCCcc--ccccH
Q 043792          182 LWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP---------------YLKGAA-EMYEDGVM--ASVDL  243 (294)
Q Consensus       182 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~---------------~~~~~~-~~~~~~~~--~~v~v  243 (294)
                      +.|+.+|.++|++++.+.++++++++++|++.+||+.......               ++.|++ .+++++.+  .|+|+
T Consensus       146 ~~Y~~sK~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v  225 (342)
T d2blla1         146 WIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDI  225 (342)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEH
T ss_pred             chhhhcccchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeeccc
Confidence            7899999999999999999999999999999999997443221               334555 44555544  49999


Q ss_pred             HHHHHHHHhhhcCcC--CCC-eEEee-cc-cccHHHHHHHHHHHhCCCCCC
Q 043792          244 RFYVDAHICVFEDVS--SYG-RYLCF-NH-VINCNEDAMKLARMLLPPSDT  289 (294)
Q Consensus       244 ~D~a~~i~~~~~~~~--~~~-~~~~~-~~-~~s~~~~~~~~~~~~~~~~~~  289 (294)
                      +|+|+++..+++.+.  ..+ .|+++ ++ .+|+.|+++.+.+.++.....
T Consensus       226 ~D~~~a~~~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~  276 (342)
T d2blla1         226 RDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR  276 (342)
T ss_dssp             HHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTG
T ss_pred             ccccceeeeehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccc
Confidence            999999999998743  234 47774 44 489999999999998866543

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.6e-34  Score=248.19  Aligned_cols=248  Identities=15%  Similarity=0.001  Sum_probs=189.2

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC-----hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--c
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK-----LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--G   98 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~   98 (294)
                      +|++||||||||||+||+++|+++||+|++++|..+.     ...+.... .......++++.+|+.+.+.+...++  +
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Di~~~~~~~~~~~~~~   79 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDP-HNVNKALMKLHYADLTDASSLRRWIDVIK   79 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC---------CCEEEEECCTTCHHHHHHHHHHHC
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhh-hhccccceEEEEccccCHHHHHHHHhhhc
Confidence            4799999999999999999999999999999995431     11111100 01123468899999999999998886  5


Q ss_pred             CCEEEecCCCCCCCCc--chhhhHhHhhHHHHHHHHHHHhc----CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCC
Q 043792           99 CSGLFYSFEPPSDHST--YDELTAEVETMAAHNVLEACAQT----NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWS  172 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~~--~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~  172 (294)
                      +|+|||+|+.......  .+...++.|+.++.+++++++..    ....++++.||..  +++..     ..+++|+.+.
T Consensus        80 ~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~--~~~~~-----~~~~~E~~~~  152 (339)
T d1n7ha_          80 PDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSE--MFGST-----PPPQSETTPF  152 (339)
T ss_dssp             CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGG--GGTTS-----CSSBCTTSCC
T ss_pred             cchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccce--ecccC-----CCCCCCCCCC
Confidence            7999999998664332  23478899999999999998764    1334677776653  44433     2368899988


Q ss_pred             ChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc----------cccccc--cccCCCccc-
Q 043792          173 DVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP----------YLKGAA--EMYEDGVMA-  239 (294)
Q Consensus       173 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~----------~~~~~~--~~~~~~~~~-  239 (294)
                      .|.      +.|+.+|..+|.++..+..+++++++++||++||||.......          ...+..  ...+++.+. 
T Consensus       153 ~p~------~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r  226 (339)
T d1n7ha_         153 HPR------SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASR  226 (339)
T ss_dssp             CCC------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEE
T ss_pred             CCc------chhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccc
Confidence            877      8999999999999999999999999999999999997543221          111222  344555443 


Q ss_pred             -cccHHHHHHHHHhhhcCcCCCCeEEeecccccHHHHHHHHHHHhCCCC
Q 043792          240 -SVDLRFYVDAHICVFEDVSSYGRYLCFNHVINCNEDAMKLARMLLPPS  287 (294)
Q Consensus       240 -~v~v~D~a~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~  287 (294)
                       |+|++|+|+++..++.++...+.++..+...++.++++.+.+.++...
T Consensus       227 d~~~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~  275 (339)
T d1n7ha_         227 DWGFAGDYVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNW  275 (339)
T ss_dssp             ECEEHHHHHHHHHHHHTSSSCCEEEECCSCEEEHHHHHHHHHHHTTCCG
T ss_pred             cceeeehHHHHHHHHHhcCCCCccccccccccccchhhhhhhhhhhccc
Confidence             999999999999999988766667778888999999999999988764

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.3e-34  Score=253.85  Aligned_cols=253  Identities=17%  Similarity=0.154  Sum_probs=176.8

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEec-------------CC---CC-hhhHHHHHhhccCCCCeEEEECCCCC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALH-------------NH---GK-LQCIEEELINYNEEKKLKVFQADPFD   88 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r-------------~~---~~-~~~l~~~~~~~~~~~~v~~~~~Dl~~   88 (294)
                      +|||||||||||||++|+++|+++||+|++++.             +.   .. .+.+.. . ....+.+++++.+|++|
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~i~~~~~Dl~d   78 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISR-W-KALTGKSIELYVGDICD   78 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHH-H-HHHHCCCCEEEESCTTS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHH-H-HhhcCCCcEEEEccCCC
Confidence            589999999999999999999999999999862             11   01 111111 0 11234579999999999


Q ss_pred             hhHHHHHhcc--CCEEEecCCCCCCCCc-----chhhhHhHhhHHHHHHHHHHHhcCCCc-EEEEecCcceeeeCCCCCC
Q 043792           89 YHSLVNALKG--CSGLFYSFEPPSDHST-----YDELTAEVETMAAHNVLEACAQTNTVD-KVVFTSSLTAVVWNNHRDN  160 (294)
Q Consensus        89 ~~~~~~~~~~--~d~Vih~a~~~~~~~~-----~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~v~~Ss~~~~~~~~~~~~  160 (294)
                      .+.+.+++++  +|+|||+|+......+     .....+++|+.|+.+++++|++. +++ ++++.||..  .|+.....
T Consensus        79 ~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~~i~~ss~~--~~~~~~~~  155 (393)
T d1i24a_          79 FEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF-GEECHLVKLGTMG--EYGTPNID  155 (393)
T ss_dssp             HHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEECCGG--GGCCCSSC
T ss_pred             HHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHh-ccccceeeccccc--cccccccc
Confidence            9999999985  5999999987553221     12267889999999999999998 544 566666664  34332200


Q ss_pred             CCC--CCCCCCCCCChh-hhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-------------
Q 043792          161 PTS--HDFDERNWSDVN-LCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-------------  224 (294)
Q Consensus       161 ~~~--~~~~e~~~~~~~-~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-------------  224 (294)
                      ..+  ....|+...... .+..+.+.|+.+|.++|.+++.+.++++++++++||+++|||.......             
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~  235 (393)
T d1i24a_         156 IEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAV  235 (393)
T ss_dssp             BCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTT
T ss_pred             cccccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccc
Confidence            000  011111110000 0112227899999999999999999999999999999999998543210             


Q ss_pred             -----------cccccc-cccCCCccc--cccHHHHHHHHHhhhcCcCCCCeE-E--eecccccHHHHHHHHHHHh
Q 043792          225 -----------YLKGAA-EMYEDGVMA--SVDLRFYVDAHICVFEDVSSYGRY-L--CFNHVINCNEDAMKLARML  283 (294)
Q Consensus       225 -----------~~~~~~-~~~~~~~~~--~v~v~D~a~~i~~~~~~~~~~~~~-~--~~~~~~s~~~~~~~~~~~~  283 (294)
                                 ...+++ .+++++.+.  |+|++|+++++..++++....+.| +  ..++.+++.++++.+.+..
T Consensus       236 ~~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~  311 (393)
T d1i24a_         236 FGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAG  311 (393)
T ss_dssp             TCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHH
T ss_pred             cccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHH
Confidence                       122333 455666654  999999999999999887776653 3  3456799999999887764

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.8e-34  Score=242.36  Aligned_cols=233  Identities=15%  Similarity=0.111  Sum_probs=178.1

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCCEEE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCSGLF  103 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~Vi  103 (294)
                      +|||||||||||||++|+++|+++|+.|+++++..+                      .|+.+.+.+.++++  .+|.||
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~----------------------~~~~~~~~~~~~~~~~~~d~v~   59 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE----------------------LNLLDSRAVHDFFASERIDQVY   59 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT----------------------CCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh----------------------ccccCHHHHHHHHhhcCCCEEE
Confidence            579999999999999999999999999987764421                      38899999988886  489999


Q ss_pred             ecCCCCCCCCc---chhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhc
Q 043792          104 YSFEPPSDHST---YDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKF  180 (294)
Q Consensus       104 h~a~~~~~~~~---~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~  180 (294)
                      |+|+.......   ...+.+++|+.++.+++++|.+. +++||||+||.+  +|+...    ..+++|+.+....+.. +
T Consensus        60 ~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~v~~~i~~SS~~--vyg~~~----~~~~~E~~~~~~~~~~-~  131 (315)
T d1e6ua_          60 LAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLGSSC--IYPKLA----KQPMAESELLQGTLEP-T  131 (315)
T ss_dssp             ECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGG--GSCTTC----CSSBCGGGTTSSCCCG-G
T ss_pred             EcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECCce--EcCCCC----CCCccCCccccCCCCC-C
Confidence            99877653321   22366889999999999999999 999999999996  555544    4467777655433221 1


Q ss_pred             cchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc----------------cccccc-cccCCCc--cccc
Q 043792          181 KLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP----------------YLKGAA-EMYEDGV--MASV  241 (294)
Q Consensus       181 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~----------------~~~~~~-~~~~~~~--~~~v  241 (294)
                      .++|+.+|.++|++++.|.+++|++++++||++||||++.....                ...+.. .+.+++.  ..|+
T Consensus       132 ~~~Y~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~  211 (315)
T d1e6ua_         132 NEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFL  211 (315)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEE
Confidence            26799999999999999999999999999999999998643321                111222 3444444  3499


Q ss_pred             cHHHHHHHHHhhhcCcCC---------CCeEE-eecccccHHHHHHHHHHHhCCCCC
Q 043792          242 DLRFYVDAHICVFEDVSS---------YGRYL-CFNHVINCNEDAMKLARMLLPPSD  288 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~~~---------~~~~~-~~~~~~s~~~~~~~~~~~~~~~~~  288 (294)
                      |++|+++++..++.....         .+.+. ..+...++.++++.+.+.++.+..
T Consensus       212 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~  268 (315)
T d1e6ua_         212 HVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGR  268 (315)
T ss_dssp             EHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSE
T ss_pred             EeehhHHHHHHhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCcc
Confidence            999999999998865321         12343 356678999999999999887654

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.8e-33  Score=240.46  Aligned_cols=253  Identities=14%  Similarity=0.055  Sum_probs=185.8

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC-ChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCCEEE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG-KLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCSGLF  103 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~Vi  103 (294)
                      |.|||||||||||++|+++|+++|++|+++++... ........  ......+++++.+|++|.+.+..+++  ++|+||
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~--~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi   79 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARL--EVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVI   79 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHH--HHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhH--HhhcccCCeEEEeecCCHHHHHHHHhccCCCEEE
Confidence            56999999999999999999999999999987432 22222220  11234579999999999999999887  689999


Q ss_pred             ecCCCCCCCCc--chhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhcc
Q 043792          104 YSFEPPSDHST--YDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFK  181 (294)
Q Consensus       104 h~a~~~~~~~~--~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  181 (294)
                      |+|+.......  .+.....+|+.++.+++++|++. ++++||++||..  +|+.....+...+++|+.+..|.      
T Consensus        80 hlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~-~i~~~i~~SS~~--vyg~~~~~~~~~~~~e~~~~~p~------  150 (347)
T d1z45a2          80 HFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVFSSSAT--VYGDATRFPNMIPIPEECPLGPT------  150 (347)
T ss_dssp             ECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGG--GGCCGGGSTTCCSBCTTSCCCCC------
T ss_pred             EccccccccccccCcccccccchhhhHHHHHHHHhc-ccceEEeeccee--eecCcccCCCCCccccccCCCCC------
Confidence            99997653222  23477889999999999999999 999999999996  44433212334578888877777      


Q ss_pred             chhHhhHHHHHHHHHHHHHh--cCCeEEEEecCceeCCCCCCCC---------c--------c-ccccc-cccCCCc---
Q 043792          182 LWHGLSKTLAEKTAWALAMD--RGISMVSINGGLVMGPDVTISN---------P--------Y-LKGAA-EMYEDGV---  237 (294)
Q Consensus       182 ~~Y~~sK~~~e~~~~~~~~~--~~~~~~ilrp~~i~G~~~~~~~---------~--------~-~~~~~-~~~~~~~---  237 (294)
                      ++|+.+|.++|++++.+.+.  .+++++++||+++||+......         .        . .++.+ .+++++.   
T Consensus       151 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~  230 (347)
T d1z45a2         151 NPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSR  230 (347)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------C
T ss_pred             ChhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCcccc
Confidence            89999999999999998754  4799999999999998642210         0        0 11222 2334332   


Q ss_pred             -----cccccHHHHHHHHHhhhcCc------CC-CCeEEe-ecccccHHHHHHHHHHHhCCCCCCC
Q 043792          238 -----MASVDLRFYVDAHICVFEDV------SS-YGRYLC-FNHVINCNEDAMKLARMLLPPSDTS  290 (294)
Q Consensus       238 -----~~~v~v~D~a~~i~~~~~~~------~~-~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~  290 (294)
                           ..++++.|++.+++.+++..      .. .+.|++ +++++++.|+++.+.+.++.+.++.
T Consensus       231 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~~~  296 (347)
T d1z45a2         231 DGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYK  296 (347)
T ss_dssp             CSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC-
T ss_pred             CCceeeeeeeeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCCceE
Confidence                 22888888999888877532      11 123666 4578999999999999999887653

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=100.00  E-value=1.6e-32  Score=239.59  Aligned_cols=257  Identities=16%  Similarity=0.064  Sum_probs=185.0

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHH-CCCeEEEEec---CC------CChhhHHHHHhh------ccCCCCeEEEECCCCCh
Q 043792           26 TKTVCVMDASGHFASALVRRLLL-RGYTVHAALH---NH------GKLQCIEEELIN------YNEEKKLKVFQADPFDY   89 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r---~~------~~~~~l~~~~~~------~~~~~~v~~~~~Dl~~~   89 (294)
                      .|||||||||||||++|+++|++ .|++|+++++   +.      ...+.....+..      ......+.++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            47999999999999999999997 6899999974   11      111111110000      11234688999999999


Q ss_pred             hHHHHHhc---cCCEEEecCCCCCCCCc--chhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCC-CCCC
Q 043792           90 HSLVNALK---GCSGLFYSFEPPSDHST--YDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRD-NPTS  163 (294)
Q Consensus        90 ~~~~~~~~---~~d~Vih~a~~~~~~~~--~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~-~~~~  163 (294)
                      +.+.++++   ++|+|||+|+.......  ......+.|+.++.++++++++. +++++++.||...+....... ....
T Consensus        82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~  160 (383)
T d1gy8a_          82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCDKIIFSSSAAIFGNPTMGSVSTNA  160 (383)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGTBSCCC-----CC
T ss_pred             HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhcc-CCcccccccccccccccccccccccc
Confidence            99999886   57999999997664322  22367889999999999999999 999999999986433222210 1123


Q ss_pred             CCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-------------------
Q 043792          164 HDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-------------------  224 (294)
Q Consensus       164 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-------------------  224 (294)
                      .++.|+.+..|.      ++|+.+|..+|++++.+.+.++++++++||+++|||.......                   
T Consensus       161 ~~~~e~~~~~p~------~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~  234 (383)
T d1gy8a_         161 EPIDINAKKSPE------SPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMS  234 (383)
T ss_dssp             CCBCTTSCCBCS------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHH
T ss_pred             cccccccCCCCC------CHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHh
Confidence            356677766666      8999999999999999999999999999999999998654321                   


Q ss_pred             -------------cccccc-cc------cCCCcc--ccccHHHHHHHHHhhhcCc--------CCC-CeEEe-ecccccH
Q 043792          225 -------------YLKGAA-EM------YEDGVM--ASVDLRFYVDAHICVFEDV--------SSY-GRYLC-FNHVINC  272 (294)
Q Consensus       225 -------------~~~~~~-~~------~~~~~~--~~v~v~D~a~~i~~~~~~~--------~~~-~~~~~-~~~~~s~  272 (294)
                                   ...+.+ .+      .++|.+  .|+|++|+|++++.+++..        ... +.|++ +++++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~  314 (383)
T d1gy8a_         235 DIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSV  314 (383)
T ss_dssp             HHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEH
T ss_pred             hccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeH
Confidence                         000111 11      123443  4999999999999988631        111 23766 4678999


Q ss_pred             HHHHHHHHHHhCCCCCC
Q 043792          273 NEDAMKLARMLLPPSDT  289 (294)
Q Consensus       273 ~~~~~~~~~~~~~~~~~  289 (294)
                      .|+++.+.+.++.+.++
T Consensus       315 ~el~~~i~~~~~~~~~~  331 (383)
T d1gy8a_         315 REVIEVARKTTGHPIPV  331 (383)
T ss_dssp             HHHHHHHHHHHCCCCCE
T ss_pred             HHHHHHHHHHhCCCCce
Confidence            99999999999877653

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.9e-33  Score=239.17  Aligned_cols=250  Identities=15%  Similarity=0.039  Sum_probs=179.7

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC------CC-hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNH------GK-LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG   98 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~------~~-~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~   98 (294)
                      .+||||||||||||++|+++|+++|++|+++++..      .. ...+.. + ......+++++.+|++|.+.+.+++.+
T Consensus         2 ~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~Dl~d~~~l~~~~~~   79 (346)
T d1ek6a_           2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRR-V-QELTGRSVEFEEMDILDQGALQRLFKK   79 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHH-H-HHHHTCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHH-H-HHhcCCCcEEEEeeccccccccccccc
Confidence            37999999999999999999999999999997521      11 111211 0 112346899999999999999998875


Q ss_pred             --CCEEEecCCCCCCCCc--chhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCCh
Q 043792           99 --CSGLFYSFEPPSDHST--YDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDV  174 (294)
Q Consensus        99 --~d~Vih~a~~~~~~~~--~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~  174 (294)
                        +++++|+|+.......  ++...++.|+.++.++++++++. ++++|+|+||+.++..+...     ....+.....+
T Consensus        80 ~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~-~v~~~i~~ss~~~~~~~~~~-----~~~~~~~~~~~  153 (346)
T d1ek6a_          80 YSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVFSSSATVYGNPQYL-----PLDEAHPTGGC  153 (346)
T ss_dssp             CCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGGCSCSSS-----SBCTTSCCCCC
T ss_pred             cccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhc-Ccccccccccceeeeccccc-----ccccccccccc
Confidence              4689999997654322  23477899999999999999999 99999999998744333222     12222222223


Q ss_pred             hhhhhccchhHhhHHHHHHHHHHHHHh-cCCeEEEEecCceeCCCCCCCC---------c---------cccccc-cc--
Q 043792          175 NLCKKFKLWHGLSKTLAEKTAWALAMD-RGISMVSINGGLVMGPDVTISN---------P---------YLKGAA-EM--  232 (294)
Q Consensus       175 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~~~~~~ilrp~~i~G~~~~~~~---------~---------~~~~~~-~~--  232 (294)
                      .      ++|+.+|..+|+.++.+++. .+++.+++||+++||+......         .         ..++.+ .+  
T Consensus       154 ~------~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g  227 (346)
T d1ek6a_         154 T------NPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFG  227 (346)
T ss_dssp             S------SHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEEC
T ss_pred             C------ChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcC
Confidence            3      78999999999999998765 4899999999999999743211         0         011111 11  


Q ss_pred             ----cCCCcc--ccccHHHHHHHHHhhhcCcCC--CC-eEEee-cccccHHHHHHHHHHHhCCCCCC
Q 043792          233 ----YEDGVM--ASVDLRFYVDAHICVFEDVSS--YG-RYLCF-NHVINCNEDAMKLARMLLPPSDT  289 (294)
Q Consensus       233 ----~~~~~~--~~v~v~D~a~~i~~~~~~~~~--~~-~~~~~-~~~~s~~~~~~~~~~~~~~~~~~  289 (294)
                          ..++.+  .|+|++|+|.++..++.....  .+ .|+++ ++.+++.|+++.+.+.++.+.++
T Consensus       228 ~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~~~  294 (346)
T d1ek6a_         228 NDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPY  294 (346)
T ss_dssp             SCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCE
T ss_pred             CcccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCCCe
Confidence                223332  399999999998887654322  23 47654 56799999999999999987654

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=100.00  E-value=8e-32  Score=232.76  Aligned_cols=251  Identities=14%  Similarity=0.043  Sum_probs=188.6

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCCEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCSGL  102 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~V  102 (294)
                      ++|||||||||||||++|++.|+++|++|++++|+..+...+..   .....++++++.+|++|++.+.++++  .+|+|
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~---~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v   83 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFE---TARVADGMQSEIGDIRDQNKLLESIREFQPEIV   83 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHH---HTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHh---hhhcccCCeEEEeeccChHhhhhhhhhchhhhh
Confidence            57999999999999999999999999999999998776655544   22334579999999999999999887  46999


Q ss_pred             EecCCCCCCCC--cchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhc
Q 043792          103 FYSFEPPSDHS--TYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKF  180 (294)
Q Consensus       103 ih~a~~~~~~~--~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~  180 (294)
                      +|+|+......  ..+...+.+|+.++.++++++++.+..+.+++.||. ..+++...    ..+..|+.+..|.     
T Consensus        84 ~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~-~~~~~~~~----~~~~~~~~~~~p~-----  153 (356)
T d1rkxa_          84 FHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSD-KCYDNKEW----IWGYRENEAMGGY-----  153 (356)
T ss_dssp             EECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCG-GGBCCCCS----SSCBCTTSCBCCS-----
T ss_pred             hhhhccccccccccCCccccccccccchhhhhhhhcccccccccccccc-cccccccc----ccccccccccCCC-----
Confidence            99998765432  223478899999999999999998344455555544 34444444    4467777776666     


Q ss_pred             cchhHhhHHHHHHHHHHHHHh---------cCCeEEEEecCceeCCCCCCCCc--------cccccccccCCC--ccccc
Q 043792          181 KLWHGLSKTLAEKTAWALAMD---------RGISMVSINGGLVMGPDVTISNP--------YLKGAAEMYEDG--VMASV  241 (294)
Q Consensus       181 ~~~Y~~sK~~~e~~~~~~~~~---------~~~~~~ilrp~~i~G~~~~~~~~--------~~~~~~~~~~~~--~~~~v  241 (294)
                       ++|+.+|...|..+..++.+         +++.++++||+++|||.+.....        ...+.+..++.+  ...|+
T Consensus       154 -~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  232 (356)
T d1rkxa_         154 -DPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQ  232 (356)
T ss_dssp             -SHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCE
T ss_pred             -CccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeecccccccc
Confidence             88999999999998887653         47899999999999998654332        222333334433  34499


Q ss_pred             cHHHHHHHHHhhhcCcCCCCe-----EEe---ecccccHHHHHHHHHHHhCCCCCC
Q 043792          242 DLRFYVDAHICVFEDVSSYGR-----YLC---FNHVINCNEDAMKLARMLLPPSDT  289 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~~~~~~-----~~~---~~~~~s~~~~~~~~~~~~~~~~~~  289 (294)
                      |++|++.++..++......+.     ...   ....+++.++++.+.+.++...++
T Consensus       233 ~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  288 (356)
T d1rkxa_         233 HVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASW  288 (356)
T ss_dssp             ETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCE
T ss_pred             ccccccchhhhhhhhhcccccccccccccccccccccccchhhhhhHHHhCCCccE
Confidence            999999999988876443221     111   234589999999999999877653

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=100.00  E-value=1.1e-31  Score=229.87  Aligned_cols=250  Identities=14%  Similarity=0.056  Sum_probs=183.3

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC--CChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc--CCEEE
Q 043792           28 TVCVMDASGHFASALVRRLLLRGYTVHAALHNH--GKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG--CSGLF  103 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~--~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~Vi  103 (294)
                      ||||||||||||++|+++|+++|++|+++++-.  .....+..    .....+++++.+|++|.+.+.+++++  +|+||
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~----~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vi   77 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHW----LSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCF   77 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHH----HHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHH----hhccCCcEEEEcccCCHHHHHHHHHhcCCceEE
Confidence            799999999999999999999999999987532  22222322    12346899999999999999999986  49999


Q ss_pred             ecCCCCCCCCc--chhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCC-----------CCCCCCCCC
Q 043792          104 YSFEPPSDHST--YDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNP-----------TSHDFDERN  170 (294)
Q Consensus       104 h~a~~~~~~~~--~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~-----------~~~~~~e~~  170 (294)
                      |+|+.......  ++...+++|+.||.++++++.+. +++++|+.||++++.........           ......+..
T Consensus        78 h~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (338)
T d1orra_          78 HLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-NSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDEST  156 (338)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTS
T ss_pred             eecccccccccccChHHHHHHHHHHHHHHHHhhhcc-cccccccccccccccccccccccccccccccccccccCcccCC
Confidence            99998764322  23478899999999999999999 77777777776543332221000           000112222


Q ss_pred             CCChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc----------c-----ccccc-cccC
Q 043792          171 WSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP----------Y-----LKGAA-EMYE  234 (294)
Q Consensus       171 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~----------~-----~~~~~-~~~~  234 (294)
                      +..+.      +.|+.+|...|.++..+...++....++|++++|++.......          .     ..+++ .+++
T Consensus       157 ~~~~~------~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  230 (338)
T d1orra_         157 QLDFH------SPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISG  230 (338)
T ss_dssp             CCCCC------HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEES
T ss_pred             ccccc------cccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeC
Confidence            23333      8899999999999999999999999999999999877544332          1     11333 4556


Q ss_pred             CCcc--ccccHHHHHHHHHhhhcCcC-CCC-eEEee---cccccHHHHHHHHHHHhCCCCC
Q 043792          235 DGVM--ASVDLRFYVDAHICVFEDVS-SYG-RYLCF---NHVINCNEDAMKLARMLLPPSD  288 (294)
Q Consensus       235 ~~~~--~~v~v~D~a~~i~~~~~~~~-~~~-~~~~~---~~~~s~~~~~~~~~~~~~~~~~  288 (294)
                      ++.+  .|+|++|++++++.+++... ..+ .|++.   +..+++.|+++.+.+..+.+.+
T Consensus       231 ~g~~~r~~~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~  291 (338)
T d1orra_         231 NGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMR  291 (338)
T ss_dssp             SSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCC
T ss_pred             CCceeEeeecccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCce
Confidence            6554  49999999999999997643 234 46552   3468999999999999887654

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.2e-31  Score=209.86  Aligned_cols=200  Identities=14%  Similarity=0.103  Sum_probs=152.0

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      .|+||+||||||+||++++++|+++||+|++++|++++...        ....+++++.+|++|.+++.++++++|+|||
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~--------~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~   73 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS--------EGPRPAHVVVGDVLQAADVDKTVAGQDAVIV   73 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS--------SSCCCSEEEESCTTSHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccc--------ccccccccccccccchhhHHHHhcCCCEEEE
Confidence            57899999999999999999999999999999998765432        2235799999999999999999999999999


Q ss_pred             cCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchh
Q 043792          105 SFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWH  184 (294)
Q Consensus       105 ~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y  184 (294)
                      +++.....     ...+.+..++.+++++++++ +++|||++||.+.  +....    ..+       ...      ..|
T Consensus        74 ~~g~~~~~-----~~~~~~~~~~~~l~~aa~~~-~v~r~i~~ss~~~--~~~~~----~~~-------~~~------~~~  128 (205)
T d1hdoa_          74 LLGTRNDL-----SPTTVMSEGARNIVAAMKAH-GVDKVVACTSAFL--LWDPT----KVP-------PRL------QAV  128 (205)
T ss_dssp             CCCCTTCC-----SCCCHHHHHHHHHHHHHHHH-TCCEEEEECCGGG--TSCTT----CSC-------GGG------HHH
T ss_pred             EeccCCch-----hhhhhhHHHHHHHHHHHHhc-CCCeEEEEeeeec--cCCCc----ccc-------ccc------ccc
Confidence            98864422     22456788999999999999 9999999999752  22211    100       001      468


Q ss_pred             HhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHHHHHHHHhhhcCcCCCCe-E
Q 043792          185 GLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVSSYGR-Y  263 (294)
Q Consensus       185 ~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~i~~~~~~~~~~~~-~  263 (294)
                      ...|..+|++++.    .+++|+++||+.+++........+     ...+.....+|+++|+|++++.+++++...|+ +
T Consensus       129 ~~~~~~~e~~l~~----~~~~~tiirp~~~~~~~~~~~~~~-----~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~  199 (205)
T d1hdoa_         129 TDDHIRMHKVLRE----SGLKYVAVMPPHIGDQPLTGAYTV-----TLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHST  199 (205)
T ss_dssp             HHHHHHHHHHHHH----TCSEEEEECCSEEECCCCCSCCEE-----ESSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEE
T ss_pred             chHHHHHHHHHHh----cCCceEEEecceecCCCCcccEEE-----eeCCCCCCCcCCHHHHHHHHHHHhCCCCCCCEEE
Confidence            8899999887654    699999999999986542111100     11233344599999999999999998876665 4


Q ss_pred             Eee
Q 043792          264 LCF  266 (294)
Q Consensus       264 ~~~  266 (294)
                      .++
T Consensus       200 ~~s  202 (205)
T d1hdoa_         200 YPS  202 (205)
T ss_dssp             EEE
T ss_pred             ecC
Confidence            443

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.2e-31  Score=215.54  Aligned_cols=206  Identities=15%  Similarity=0.031  Sum_probs=155.7

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCC--eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGY--TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ++++|||||||||||++|+++|+++|+  +|++++|++.......        ...+++..+|+.+.+++.++++++|+|
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~--------~~~i~~~~~D~~~~~~~~~~~~~~d~v   84 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA--------YKNVNQEVVDFEKLDDYASAFQGHDVG   84 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG--------GGGCEEEECCGGGGGGGGGGGSSCSEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc--------cceeeeeeecccccccccccccccccc
Confidence            457999999999999999999999994  8999999875432211        237888899999999999999999999


Q ss_pred             EecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccc
Q 043792          103 FYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL  182 (294)
Q Consensus       103 ih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  182 (294)
                      ||+++..... .......++|+.++.+++++|.+. ++++||++||.++  ++...                       +
T Consensus        85 i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~-~v~~fi~~Ss~~~--~~~~~-----------------------~  137 (232)
T d2bkaa1          85 FCCLGTTRGK-AGAEGFVRVDRDYVLKSAELAKAG-GCKHFNLLSSKGA--DKSSN-----------------------F  137 (232)
T ss_dssp             EECCCCCHHH-HHHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTC--CTTCS-----------------------S
T ss_pred             cccccccccc-cchhhhhhhcccccceeeeccccc-CccccccCCcccc--ccCcc-----------------------c
Confidence            9999865321 122367889999999999999999 9999999999852  22222                       6


Q ss_pred             hhHhhHHHHHHHHHHHHHhcCC-eEEEEecCceeCCCCCCCCc--cccccccccCCC--ccccccHHHHHHHHHhhhcCc
Q 043792          183 WHGLSKTLAEKTAWALAMDRGI-SMVSINGGLVMGPDVTISNP--YLKGAAEMYEDG--VMASVDLRFYVDAHICVFEDV  257 (294)
Q Consensus       183 ~Y~~sK~~~e~~~~~~~~~~~~-~~~ilrp~~i~G~~~~~~~~--~~~~~~~~~~~~--~~~~v~v~D~a~~i~~~~~~~  257 (294)
                      .|+.+|..+|+.+..    .++ .++|+||+.+||+.......  +........+..  ....|+++|+|++++.++.++
T Consensus       138 ~Y~~~K~~~E~~l~~----~~~~~~~IlRP~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~~  213 (232)
T d2bkaa1         138 LYLQVKGEVEAKVEE----LKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRP  213 (232)
T ss_dssp             HHHHHHHHHHHHHHT----TCCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSC
T ss_pred             hhHHHHHHhhhcccc----ccccceEEecCceeecCCCcCcHHHHHHHHHhhccCCcccCCCeEEHHHHHHHHHHHHhcC
Confidence            799999999987765    465 48999999999987432111  111011122222  223799999999999999888


Q ss_pred             CCCCeEEeeccc
Q 043792          258 SSYGRYLCFNHV  269 (294)
Q Consensus       258 ~~~~~~~~~~~~  269 (294)
                      ..++.+++.++.
T Consensus       214 ~~~~~~i~~~~~  225 (232)
T d2bkaa1         214 RDKQMELLENKA  225 (232)
T ss_dssp             CCSSEEEEEHHH
T ss_pred             ccCCeEEEcHHH
Confidence            777777776543

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.97  E-value=5.2e-31  Score=220.18  Aligned_cols=221  Identities=10%  Similarity=0.064  Sum_probs=175.6

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCCEEEe
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCSGLFY  104 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~Vih  104 (294)
                      |||||||||||||++|+++|.++|++|++++|+.                       .|+.|.+.+.++++  ++|+|||
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~-----------------------~D~~d~~~~~~~l~~~~~d~vih   58 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD-----------------------LDITNVLAVNKFFNEKKPNVVIN   58 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-----------------------CCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh-----------------------ccCCCHHHHHHHHHHcCCCEEEe
Confidence            7899999999999999999999999999998763                       28899999999987  5699999


Q ss_pred             cCCCCCCCC--cchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccc
Q 043792          105 SFEPPSDHS--TYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL  182 (294)
Q Consensus       105 ~a~~~~~~~--~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  182 (294)
                      +|+......  .........|+..+.++.+.+... . .++++.||..  +++...    ..+..|.++..+.      .
T Consensus        59 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~-~~~~~~ss~~--v~~~~~----~~~~~e~~~~~~~------~  124 (281)
T d1vl0a_          59 CAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV-G-AEIVQISTDY--VFDGEA----KEPITEFDEVNPQ------S  124 (281)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH-T-CEEEEEEEGG--GSCSCC----SSCBCTTSCCCCC------S
T ss_pred             eccccccccccccchhhcccccccccccccccccc-c-ccccccccce--eeeccc----cccccccccccch------h
Confidence            998765322  223467788999999999988777 5 4677777775  444444    4578888887777      8


Q ss_pred             hhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc----cccccc-cccCCCccccccHHHHHHHHHhhhcCc
Q 043792          183 WHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP----YLKGAA-EMYEDGVMASVDLRFYVDAHICVFEDV  257 (294)
Q Consensus       183 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~----~~~~~~-~~~~~~~~~~v~v~D~a~~i~~~~~~~  257 (294)
                      .|+.+|..+|++++.    .+.+++++||+++||++......    +.++.. .+.++....|+|++|+++++..++++.
T Consensus       125 ~~~~~k~~~e~~~~~----~~~~~~i~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~  200 (281)
T d1vl0a_         125 AYGKTKLEGENFVKA----LNPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEK  200 (281)
T ss_dssp             HHHHHHHHHHHHHHH----HCSSEEEEEECSEESSSSCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHT
T ss_pred             hhhhhhhHHHHHHHH----hCCCccccceeEEeCCCcccccchhhhhccCCceeecCCceeccchhhhhhhhhhhhhhhc
Confidence            899999999987765    57899999999999998432221    222333 566777777999999999999999876


Q ss_pred             CCCCeE-EeecccccHHHHHHHHHHHhCCCCCC
Q 043792          258 SSYGRY-LCFNHVINCNEDAMKLARMLLPPSDT  289 (294)
Q Consensus       258 ~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~  289 (294)
                      .. |.| +.+++.+|+.|+++.+++.+|.+.++
T Consensus       201 ~~-g~~~~~~~~~~s~~e~~~~i~~~~g~~~~i  232 (281)
T d1vl0a_         201 NY-GTFHCTCKGICSWYDFAVEIFRLTGIDVKV  232 (281)
T ss_dssp             CC-EEEECCCBSCEEHHHHHHHHHHHHCCCCEE
T ss_pred             cc-CceeEeCCCccchHHHHHHHHHHhCCCceE
Confidence            54 565 45667899999999999999987654

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.96  E-value=2.3e-29  Score=212.84  Aligned_cols=235  Identities=13%  Similarity=0.052  Sum_probs=166.7

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      +++||||||||||||++|+++|+++|++|++++|+..................+++++.+|+.|.+.+.+++.+++++||
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~   81 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVIS   81 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhh
Confidence            46789999999999999999999999999999997654321111000112345799999999999999999999999999


Q ss_pred             cCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchh
Q 043792          105 SFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWH  184 (294)
Q Consensus       105 ~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y  184 (294)
                      +++...         ...|..++.++++++.+. +..++++.||.+.  ++.          .+..+..+.      ..|
T Consensus        82 ~~~~~~---------~~~~~~~~~~~l~~a~~~-~~~~~v~~Ss~g~--~~~----------~~~~~~~~~------~~~  133 (312)
T d1qyda_          82 ALAGGV---------LSHHILEQLKLVEAIKEA-GNIKRFLPSEFGM--DPD----------IMEHALQPG------SIT  133 (312)
T ss_dssp             CCCCSS---------SSTTTTTHHHHHHHHHHS-CCCSEEECSCCSS--CTT----------SCCCCCSST------THH
T ss_pred             hhhhcc---------cccchhhhhHHHHHHHHh-cCCcEEEEeeccc--cCC----------Ccccccchh------hhh
Confidence            987643         335667788899999888 6667888887642  111          111111111      445


Q ss_pred             HhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-----cccccc-cccCCCc--cccccHHHHHHHHHhhhcC
Q 043792          185 GLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-----YLKGAA-EMYEDGV--MASVDLRFYVDAHICVFED  256 (294)
Q Consensus       185 ~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-----~~~~~~-~~~~~~~--~~~v~v~D~a~~i~~~~~~  256 (294)
                      ...|..++    .+....+++++++||+.+||+.......     ...+.. .+++++.  ..|||++|+|++++.++.+
T Consensus       134 ~~~~~~~~----~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~  209 (312)
T d1qyda_         134 FIDKRKVR----RAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDD  209 (312)
T ss_dssp             HHHHHHHH----HHHHHTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTC
T ss_pred             hHHHHHHH----HhhcccccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcC
Confidence            55555544    4555679999999999999976432221     112222 4555544  4499999999999999988


Q ss_pred             cCCCC-e-EEee-cccccHHHHHHHHHHHhCCCCCCCC
Q 043792          257 VSSYG-R-YLCF-NHVINCNEDAMKLARMLLPPSDTST  291 (294)
Q Consensus       257 ~~~~~-~-~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~  291 (294)
                      +...+ . |++. ++.+|++|+++.+.+.+|.+.+...
T Consensus       210 ~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~  247 (312)
T d1qyda_         210 PQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIY  247 (312)
T ss_dssp             GGGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCCEECC
T ss_pred             ccccCceEEEeCCCcCCCHHHHHHHHHHHHCCCCeEEE
Confidence            76655 3 4554 4569999999999999998865443

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.96  E-value=6.3e-29  Score=202.89  Aligned_cols=225  Identities=15%  Similarity=0.072  Sum_probs=156.4

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCe--EEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYT--VHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      .|++|||||||||||+++++.|+++|++  |++++|++++...         ...+++++.+|+.+.+.+.++++++|+|
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~---------~~~~~~~~~~d~~~~~~~~~~~~~~d~v   72 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK---------IGGEADVFIGDITDADSINPAFQGIDAL   72 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH---------TTCCTTEEECCTTSHHHHHHHHTTCSEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh---------ccCCcEEEEeeeccccccccccccceee
Confidence            4689999999999999999999999976  5556776543322         2347899999999999999999999999


Q ss_pred             EecCCCCCCCC---------------cchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792          103 FYSFEPPSDHS---------------TYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus       103 ih~a~~~~~~~---------------~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                      ||+++......               ........+|+.++.++++.+... ..+++.+.|+...  +...          
T Consensus        73 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~--~~~~----------  139 (252)
T d2q46a1          73 VILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-GVKHIVVVGSMGG--TNPD----------  139 (252)
T ss_dssp             EECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-TCSEEEEEEETTT--TCTT----------
T ss_pred             EEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccc-ccccccccccccc--CCCC----------
Confidence            99987643111               111256778999999999999888 7788888877531  1100          


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHHHH
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYV  247 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a  247 (294)
                           .+.. ......|...+.+.    ..+..+.+++++++||+++||+...... ...+...........|||++|+|
T Consensus       140 -----~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~ilRp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~i~~~Dva  208 (252)
T d2q46a1         140 -----HPLN-KLGNGNILVWKRKA----EQYLADSGTPYTIIRAGGLLDKEGGVRE-LLVGKDDELLQTDTKTVPRADVA  208 (252)
T ss_dssp             -----CGGG-GGGGCCHHHHHHHH----HHHHHHSSSCEEEEEECEEECSCTTSSC-EEEESTTGGGGSSCCEEEHHHHH
T ss_pred             -----cccc-cccccchhhhhhhh----hhhhhcccccceeecceEEECCCcchhh-hhhccCcccccCCCCeEEHHHHH
Confidence                 0010 00003344444433    4455567999999999999999854333 33333323334445599999999


Q ss_pred             HHHHhhhcCcCCCCe-EEeecc----cccHHHHHHHHHHH
Q 043792          248 DAHICVFEDVSSYGR-YLCFNH----VINCNEDAMKLARM  282 (294)
Q Consensus       248 ~~i~~~~~~~~~~~~-~~~~~~----~~s~~~~~~~~~~~  282 (294)
                      ++++.+++++...++ |+++++    ..++.++.+.+.+.
T Consensus       209 ~a~~~~l~~~~~~g~~~~i~~~~~~~~~~~~~~~~lf~~i  248 (252)
T d2q46a1         209 EVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQV  248 (252)
T ss_dssp             HHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHTTC
T ss_pred             HHHHHHhCCccccCcEEEEeeCCCCCChhHHHHHHHHHHH
Confidence            999999998877675 766542    25567777666553

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.96  E-value=1.3e-28  Score=197.40  Aligned_cols=194  Identities=15%  Similarity=0.106  Sum_probs=137.7

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCC--eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHh-ccCCEE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGY--TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNAL-KGCSGL  102 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~-~~~d~V  102 (294)
                      .|||||||||||||++|+++|+++|+  +|++++|++..            ...+++   .+..|..++.+.+ ..+|+|
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~------------~~~~~~---~~~~d~~~~~~~~~~~~d~v   66 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA------------EHPRLD---NPVGPLAELLPQLDGSIDTA   66 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC------------CCTTEE---CCBSCHHHHGGGCCSCCSEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh------------hccccc---ccccchhhhhhccccchhee
Confidence            38999999999999999999999997  67777776422            112333   3444444444333 357999


Q ss_pred             EecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccc
Q 043792          103 FYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL  182 (294)
Q Consensus       103 ih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  182 (294)
                      |||++.........+...+.|+.++.+++++|++. ++++|+++||.++  ++...                       +
T Consensus        67 i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-~v~~~i~~Ss~~~--~~~~~-----------------------~  120 (212)
T d2a35a1          67 FCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVSALGA--DAKSS-----------------------I  120 (212)
T ss_dssp             EECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTC--CTTCS-----------------------S
T ss_pred             eeeeeeeccccccccccccchhhhhhhcccccccc-ccccccccccccc--ccccc-----------------------c
Confidence            99988765444445578899999999999999998 9999999999863  22222                       6


Q ss_pred             hhHhhHHHHHHHHHHHHHhcCC-eEEEEecCceeCCCCCCCCc-cccccccccCCCccccccHHHHHHHHHhhhcCcCCC
Q 043792          183 WHGLSKTLAEKTAWALAMDRGI-SMVSINGGLVMGPDVTISNP-YLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVSSY  260 (294)
Q Consensus       183 ~Y~~sK~~~e~~~~~~~~~~~~-~~~ilrp~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~v~v~D~a~~i~~~~~~~~~~  260 (294)
                      .|+.+|..+|+.++.    .++ +++|+||+.|||+....... ...........+.+.+||++|+|++++.+++++..+
T Consensus       121 ~y~~~K~~~E~~l~~----~~~~~~~I~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~~g  196 (212)
T d2a35a1         121 FYNRVKGELEQALQE----QGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRLALEEGKG  196 (212)
T ss_dssp             HHHHHHHHHHHHHTT----SCCSEEEEEECCSEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCCSE
T ss_pred             chhHHHHHHhhhccc----cccccceeeCCcceeCCcccccHHHHHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCCCCC
Confidence            799999999987764    465 59999999999998533211 111111112234455899999999999999876643


Q ss_pred             CeEE
Q 043792          261 GRYL  264 (294)
Q Consensus       261 ~~~~  264 (294)
                      ..|+
T Consensus       197 ~~~~  200 (212)
T d2a35a1         197 VRFV  200 (212)
T ss_dssp             EEEE
T ss_pred             CEEE
Confidence            3343

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=4.4e-28  Score=204.41  Aligned_cols=231  Identities=13%  Similarity=0.093  Sum_probs=155.5

Q ss_pred             EEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHH-H-----hccCCE
Q 043792           29 VCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVN-A-----LKGCSG  101 (294)
Q Consensus        29 vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~-~-----~~~~d~  101 (294)
                      |||||||||||++|++.|+++|+ +|+++++-.........   .     +  ....|..+.+.+.. .     +..+++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~---~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNL---V-----D--LNIADYMDKEDFLIQIMAGEEFGDVEA   71 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHH---H-----T--SCCSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcc---c-----c--cchhhhccchHHHHHHhhhhcccchhh
Confidence            89999999999999999999995 78888643322211111   0     0  01112222222222 2     235799


Q ss_pred             EEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhcc
Q 043792          102 LFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFK  181 (294)
Q Consensus       102 Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  181 (294)
                      |+|+|+.............+.|+.++.+++++++.. +++ +++.||+. ..++..     .....|+.+..+.      
T Consensus        72 i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~i~-~v~~ss~~-~~~~~~-----~~~~~~~~~~~~~------  137 (307)
T d1eq2a_          72 IFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EIP-FLYASSAA-TYGGRT-----SDFIESREYEKPL------  137 (307)
T ss_dssp             EEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TCC-EEEEEEGG-GGTTCC-----SCBCSSGGGCCCS------
T ss_pred             hhhhcccccccccccccccccccccccccccccccc-ccc-cccccccc-cccccc-----ccccccccccccc------
Confidence            999998877776666688889999999999999998 875 66666654 233322     2234444444444      


Q ss_pred             chhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-----------ccccccc--ccCCCc--cccccHHHH
Q 043792          182 LWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-----------YLKGAAE--MYEDGV--MASVDLRFY  246 (294)
Q Consensus       182 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-----------~~~~~~~--~~~~~~--~~~v~v~D~  246 (294)
                      +.|+.+|..+|.+++.+..+++++++++||+++|||.......           +..++..  ..+++.  ..|+|++|+
T Consensus       138 ~~Y~~~K~~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~  217 (307)
T d1eq2a_         138 NVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDV  217 (307)
T ss_dssp             SHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHH
T ss_pred             cccccccchhhhhccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccH
Confidence            8899999999999999999999999999999999998543321           2234332  224443  349999999


Q ss_pred             HHHHHhhhcCcCCCCeEE-eecccccHHHHHHHHHHHhC
Q 043792          247 VDAHICVFEDVSSYGRYL-CFNHVINCNEDAMKLARMLL  284 (294)
Q Consensus       247 a~~i~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~  284 (294)
                      ++++..++.++. .+.|+ ..++..+++|+++.+.+..+
T Consensus       218 ~~~~~~~~~~~~-~~~~~~~~~~~~si~~i~~~i~~~~~  255 (307)
T d1eq2a_         218 ADVNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHK  255 (307)
T ss_dssp             HHHHHHHHHHCC-CEEEEESCSCCBCHHHHHHHC-----
T ss_pred             HHHHHHHhhhcc-ccccccccccchhHHHHHHHHHHhcC
Confidence            999999987654 34554 46778999999999987544

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.95  E-value=9.4e-28  Score=201.91  Aligned_cols=228  Identities=13%  Similarity=0.082  Sum_probs=162.2

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHH-HhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEE-LINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~-~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      ++|||||||||||||++++++|+++|++|++++|+.......... ........+++++.+|+.+...+.+.+++++.||
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi   81 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI   81 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeee
Confidence            368999999999999999999999999999999976553221110 0011223578999999999999999999999999


Q ss_pred             ecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccch
Q 043792          104 YSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLW  183 (294)
Q Consensus       104 h~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  183 (294)
                      |+++..             +..++.++++++... +++++++.||.+ ..            .++.......      ..
T Consensus        82 ~~~~~~-------------~~~~~~~~~~a~~~~-~~~~~~~~s~~~-~~------------~~~~~~~~~~------~~  128 (307)
T d1qyca_          82 STVGSL-------------QIESQVNIIKAIKEV-GTVKRFFPSEFG-ND------------VDNVHAVEPA------KS  128 (307)
T ss_dssp             ECCCGG-------------GSGGGHHHHHHHHHH-CCCSEEECSCCS-SC------------TTSCCCCTTH------HH
T ss_pred             eccccc-------------ccchhhHHHHHHHHh-ccccceeeeccc-cc------------cccccccccc------cc
Confidence            998743             334566788888888 778888888853 11            1111111111      34


Q ss_pred             hHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc----cccccc-ccc--CCCccccccHHHHHHHHHhhhcC
Q 043792          184 HGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP----YLKGAA-EMY--EDGVMASVDLRFYVDAHICVFED  256 (294)
Q Consensus       184 Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~----~~~~~~-~~~--~~~~~~~v~v~D~a~~i~~~~~~  256 (294)
                      +...+...+.++    .+.+++++++||+++||+.......    ..++.. ..+  ++..+.|+|++|+|++++.++++
T Consensus       129 ~~~~~~~~~~~~----~~~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~  204 (307)
T d1qyca_         129 VFEVKAKVRRAI----EAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDD  204 (307)
T ss_dssp             HHHHHHHHHHHH----HHHTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSC
T ss_pred             cccccccccchh----hccCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcC
Confidence            555555555544    4568999999999999986432211    223333 333  34455699999999999999988


Q ss_pred             cCCCCe--EEee-cccccHHHHHHHHHHHhCCCCCC
Q 043792          257 VSSYGR--YLCF-NHVINCNEDAMKLARMLLPPSDT  289 (294)
Q Consensus       257 ~~~~~~--~~~~-~~~~s~~~~~~~~~~~~~~~~~~  289 (294)
                      +...++  |++. ++.+|+.|+++.+.+.+|.+.++
T Consensus       205 ~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G~~~~~  240 (307)
T d1qyca_         205 PRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEK  240 (307)
T ss_dssp             GGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCEE
T ss_pred             hhhcCceeEEeCCCCccCHHHHHHHHHHHHCCCCcE
Confidence            766553  5544 56799999999999999987654

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.94  E-value=4.8e-26  Score=191.10  Aligned_cols=219  Identities=13%  Similarity=0.053  Sum_probs=157.5

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc--CCEEEe
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG--CSGLFY  104 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~Vih  104 (294)
                      |||||||||||||++|++.|.++|+.| +++++...                   +.+|++|.+.+.+++++  +|+|||
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~~-------------------~~~Dl~~~~~~~~~i~~~~~D~Vih   60 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSKE-------------------FCGDFSNPKGVAETVRKLRPDVIVN   60 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEEE-EECTTCSS-------------------SCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEE-EEECCCcc-------------------ccCcCCCHHHHHHHHHHcCCCEEEE
Confidence            789999999999999999999998654 44444311                   23699999999999975  599999


Q ss_pred             cCCCCCC--CCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccc
Q 043792          105 SFEPPSD--HSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKL  182 (294)
Q Consensus       105 ~a~~~~~--~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  182 (294)
                      +|+....  ....+...++.|+.++.++++++++. ++ +++++||..  +|+...    ..+.+|+.+..|.      +
T Consensus        61 ~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~~~~ss~~--~~~~~~----~~~~~E~~~~~p~------~  126 (298)
T d1n2sa_          61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANET-GA-WVVHYSTDY--VFPGTG----DIPWQETDATSPL------N  126 (298)
T ss_dssp             CCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT-TC-EEEEEEEGG--GSCCCT----TCCBCTTSCCCCS------S
T ss_pred             ecccccccccccCccccccccccccccchhhhhcc-cc-ccccccccc--cccCCC----CCCCccccccCCC------c
Confidence            9987653  23334478899999999999999888 64 688888875  333333    4488899888877      8


Q ss_pred             hhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc-----cccccc-cccCCCccccccHHHHHHHHHhhhc-
Q 043792          183 WHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP-----YLKGAA-EMYEDGVMASVDLRFYVDAHICVFE-  255 (294)
Q Consensus       183 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~-----~~~~~~-~~~~~~~~~~v~v~D~a~~i~~~~~-  255 (294)
                      .|+.+|..+|.++..+    .....++|++..++........     +..+.. ...++....++|++|+++++..++. 
T Consensus       127 ~y~~~k~~~e~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~  202 (298)
T d1n2sa_         127 VYGKTKLAGEKALQDN----CPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRV  202 (298)
T ss_dssp             HHHHHHHHHHHHHHHH----CSSEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHH
T ss_pred             hHhhhhhhhhhhHHhh----hcccccccccceeeccCCccchhhhhhhcccceeecccceeecccccchHHHHHHHHHhh
Confidence            9999999999988764    3445666766666443211111     122222 3344445559999999999888765 


Q ss_pred             ---CcCCCCeEEeec-ccccHHHHHHHHHHHh
Q 043792          256 ---DVSSYGRYLCFN-HVINCNEDAMKLARML  283 (294)
Q Consensus       256 ---~~~~~~~~~~~~-~~~s~~~~~~~~~~~~  283 (294)
                         .+...+.|++++ +.++..++++.+.+..
T Consensus       203 ~~~~~~~~~~~n~~~~~~~~~~~~~~~i~~~~  234 (298)
T d1n2sa_         203 ALNKPEVAGLYHLVAGGTTTWHDYAALVFDEA  234 (298)
T ss_dssp             HHHCGGGCEEEECCCBSCEEHHHHHHHHHHHH
T ss_pred             hhccccccccccccCCCceecHHHHHHHHhhh
Confidence               233445676655 6799999998887654

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.93  E-value=3.9e-25  Score=190.13  Aligned_cols=224  Identities=16%  Similarity=0.118  Sum_probs=162.5

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChh-HHHHHhccCCEEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYH-SLVNALKGCSGLF  103 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~-~~~~~~~~~d~Vi  103 (294)
                      ++|+|+|||||||||++|++.|+++||+|++++|++++.....-     ....+++++.+|+.|.. .+..++.++|.++
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~-----~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~   76 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEEL-----QAIPNVTLFQGPLLNNVPLMDTLFEGAHLAF   76 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHH-----HTSTTEEEEESCCTTCHHHHHHHHTTCSEEE
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhh-----cccCCCEEEEeeCCCcHHHHHHHhcCCceEE
Confidence            46899999999999999999999999999999998876543221     12358999999999865 4677888999998


Q ss_pred             ecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccch
Q 043792          104 YSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLW  183 (294)
Q Consensus       104 h~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  183 (294)
                      ++.....          ..++..+.++++++.+. +++++++.||....  ....      ..       ..      .+
T Consensus        77 ~~~~~~~----------~~~~~~~~~~~~aa~~a-gv~~~v~~Ss~~~~--~~~~------~~-------~~------~~  124 (350)
T d1xgka_          77 INTTSQA----------GDEIAIGKDLADAAKRA-GTIQHYIYSSMPDH--SLYG------PW-------PA------VP  124 (350)
T ss_dssp             ECCCSTT----------SCHHHHHHHHHHHHHHH-SCCSEEEEEECCCG--GGTS------SC-------CC------CT
T ss_pred             eeccccc----------chhhhhhhHHHHHHHHh-CCCceEEEeecccc--ccCC------cc-------cc------hh
Confidence            8765322          24677789999999999 88888888886411  1111      00       00      45


Q ss_pred             hHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCc------cccccc----cccCCCccccccH-HHHHHHHHh
Q 043792          184 HGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP------YLKGAA----EMYEDGVMASVDL-RFYVDAHIC  252 (294)
Q Consensus       184 Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~------~~~~~~----~~~~~~~~~~v~v-~D~a~~i~~  252 (294)
                      |..+|...+.++.    +.+++++++||+.+++........      ...+..    +..++....|+++ +|+++++..
T Consensus       125 ~~~~k~~~~~~~~----~~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~  200 (350)
T d1xgka_         125 MWAPKFTVENYVR----QLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQ  200 (350)
T ss_dssp             TTHHHHHHHHHHH----TSSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHHH----hhccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHH
Confidence            7788887777555    468999999999988764322221      122222    2234555557765 899999999


Q ss_pred             hhcCc--CCCCe-EEeecccccHHHHHHHHHHHhCCCCCC
Q 043792          253 VFEDV--SSYGR-YLCFNHVINCNEDAMKLARMLLPPSDT  289 (294)
Q Consensus       253 ~~~~~--~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~  289 (294)
                      ++..+  ...|+ |+++++.+|+.|+++.+.+.+|.+.++
T Consensus       201 ~l~~~~~~~~G~~~~~~g~~~T~~eia~~l~~~~G~~v~~  240 (350)
T d1xgka_         201 IFKDGPQKWNGHRIALTFETLSPVQVCAAFSRALNRRVTY  240 (350)
T ss_dssp             HHHHCHHHHTTCEEEECSEEECHHHHHHHHHHHHTSCEEE
T ss_pred             HHhCChhhcCCeEEEEeCCcCCHHHHHHHHHHHHCCcceE
Confidence            88653  23454 778888899999999999999988654

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.93  E-value=8.3e-24  Score=171.82  Aligned_cols=210  Identities=14%  Similarity=0.064  Sum_probs=155.9

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++|+++||||++.||+.+++.|+++|++|++.+|++++.+.+.+++     ..+..++.+|++|+++++++++      
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   78 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-----ADAARYVHLDVTQPAQWKAAVDTAVTAF   78 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----hCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999999999987776666532     2478899999999998887775      


Q ss_pred             -cCCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                       .+|++||||+........      .++.+++|+.++.++.+++.+.   ++-.++|++||..+..... .    .    
T Consensus        79 g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~-~----~----  149 (244)
T d1nffa_          79 GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTV-A----C----  149 (244)
T ss_dssp             SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-T----B----
T ss_pred             CCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccc-c----c----
Confidence             479999999875533211      1388999999999988865433   2446899999986422111 1    1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHH
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLR  244 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~  244 (294)
                                    ..|+.+|.+.+.+.+.++.+   +|+++.+|.||.+..+....   +.+ ..  .......+..++
T Consensus       150 --------------~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~---~~~-~~--~~~pl~R~~~p~  209 (244)
T d1nffa_         150 --------------HGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDW---VPE-DI--FQTALGRAAEPV  209 (244)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTT---SCT-TC--SCCSSSSCBCHH
T ss_pred             --------------cchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhh---hhH-HH--HhccccCCCCHH
Confidence                          78999999999999998876   48999999999997655211   111 11  111111278899


Q ss_pred             HHHHHHHhhhcCc--CCCCeEEeec
Q 043792          245 FYVDAHICVFEDV--SSYGRYLCFN  267 (294)
Q Consensus       245 D~a~~i~~~~~~~--~~~~~~~~~~  267 (294)
                      |+|+++++++...  ..+|+.+..+
T Consensus       210 diA~~v~fL~s~~s~~itG~~i~vD  234 (244)
T d1nffa_         210 EVSNLVVYLASDESSYSTGAEFVVD  234 (244)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHHhChhhCCCcCCEEEEC
Confidence            9999999998543  3467754443

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.93  E-value=2.2e-24  Score=176.36  Aligned_cols=222  Identities=13%  Similarity=0.047  Sum_probs=160.9

Q ss_pred             CCCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           22 SSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        22 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      .+..+|.+|||||++.||+.+++.|+++|++|++++|+.+..+.+.+++  ...+.++..+.+|++|++++.++++    
T Consensus         6 f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l--~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   83 (251)
T d2c07a1           6 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEI--KSFGYESSGYAGDVSKKEEISEVINKILT   83 (251)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHH--HTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHH--HhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999887777666643  3345578999999999998887775    


Q ss_pred             ---cCCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                         .+|++||||+........      .++.+++|+.++.++.+++.+.   ++-.++|++||..+.......       
T Consensus        84 ~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~-------  156 (251)
T d2c07a1          84 EHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQ-------  156 (251)
T ss_dssp             HCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTC-------
T ss_pred             hcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCC-------
Confidence               579999998875543221      1388999999998888876533   245799999998654322212       


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-cccccccccCCCccccc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YLKGAAEMYEDGVMASV  241 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~v  241 (294)
                                      ..|+.+|.+.+.+.+.++.+   +|+++.+|.||.+..+....... ..+......+-++  +.
T Consensus       157 ----------------~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~pl~R--~~  218 (251)
T d2c07a1         157 ----------------ANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGR--MG  218 (251)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTTSS--CB
T ss_pred             ----------------HHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHHHHHhcCCCCC--Cc
Confidence                            78999999999999998876   48999999999997665221110 1000001111222  77


Q ss_pred             cHHHHHHHHHhhhcCcC--CCCeEEeecccc
Q 043792          242 DLRFYVDAHICVFEDVS--SYGRYLCFNHVI  270 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~~--~~~~~~~~~~~~  270 (294)
                      ..+|+|++++.++....  .+|+.+..++.+
T Consensus       219 ~pedvA~~v~fL~S~~s~~itG~~i~vDGG~  249 (251)
T d2c07a1         219 TPEEVANLACFLSSDKSGYINGRVFVIDGGL  249 (251)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CHHHHHHHHHHHhCchhCCCcCcEEEECCCc
Confidence            89999999999986443  467766555444

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=3.6e-24  Score=174.16  Aligned_cols=214  Identities=16%  Similarity=0.077  Sum_probs=157.4

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++|+++||||++.||+.+++.|+++|++|++.+|+++..+.+.+++     +.+...+.+|++|+++++++++      
T Consensus         2 l~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (243)
T d1q7ba_           2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL-----GANGKGLMLNVTDPASIESVLEKIRAEF   76 (243)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCCCcEEEEEecCHHHhhhhhhhhhccc
Confidence            46899999999999999999999999999999999987777766643     2368899999999998887775      


Q ss_pred             -cCCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                       ++|++||+|+........      .++.+++|+.++..+.+++.+.   ++-.++|++||..+.......         
T Consensus        77 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~---------  147 (243)
T d1q7ba_          77 GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQ---------  147 (243)
T ss_dssp             CSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC---------
T ss_pred             CCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCC---------
Confidence             479999999875544222      1288999999999998887544   244689999998643322222         


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccc-cccCC-Ccccccc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAA-EMYED-GVMASVD  242 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~-~~~~~-~~~~~v~  242 (294)
                                    ..|+.+|.+.+.+.+.++.+   +|+++.+|.||.+-.+....   +..... ..... ....+..
T Consensus       148 --------------~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~---~~~~~~~~~~~~~pl~R~~~  210 (243)
T d1q7ba_         148 --------------ANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRA---LSDDQRAGILAQVPAGRLGG  210 (243)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT---SCHHHHHHHHTTCTTSSCBC
T ss_pred             --------------HHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhh---hhhhHHHHHHhcCCCCCCCC
Confidence                          78999999999999998866   48999999999995443110   111111 11111 1112778


Q ss_pred             HHHHHHHHHhhhcCcC--CCCeEEeecc
Q 043792          243 LRFYVDAHICVFEDVS--SYGRYLCFNH  268 (294)
Q Consensus       243 v~D~a~~i~~~~~~~~--~~~~~~~~~~  268 (294)
                      .+|+|.++++++....  .+|+.+..++
T Consensus       211 pedvA~~v~fL~S~~s~~itGq~i~vdG  238 (243)
T d1q7ba_         211 AQEIANAVAFLASDEAAYITGETLHVNG  238 (243)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHHhCchhcCCcCCeEEECC
Confidence            9999999999996443  4677554443

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.92  E-value=1.3e-23  Score=171.60  Aligned_cols=221  Identities=14%  Similarity=0.038  Sum_probs=159.5

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      +.++|++|||||++.||+.+++.|+++|++|++++|+.++.+...+++. ...+.++.++.+|++|+++++++++     
T Consensus         2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~-~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLT-EKYGVETMAFRCDVSNYEEVKKLLEAVKEK   80 (251)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH-HHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH-HHhCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999998877655544331 2234578899999999998887764     


Q ss_pred             --cCCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                        ++|++|||||........      .++.+++|+.++.++.+++.+.   ++-.++|++||..+...+...    .   
T Consensus        81 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~----~---  153 (251)
T d1vl8a_          81 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPN----I---  153 (251)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSS----C---
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCcc----c---
Confidence              579999999875443221      1388999999999998886654   245699999986432222111    1   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccc------cccCCCc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAA------EMYEDGV  237 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~------~~~~~~~  237 (294)
                                     ..|+.+|.+.+.+.+.++.+   +|+++.+|.||.+-.+...   .......      ...+-+ 
T Consensus       154 ---------------~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~---~~~~~~~~~~~~~~~~pl~-  214 (251)
T d1vl8a_         154 ---------------SAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTE---AVFSDPEKLDYMLKRIPLG-  214 (251)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTH---HHHTCHHHHHHHHHTCTTS-
T ss_pred             ---------------cchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHH---hccCCHHHHHHHHhcCCCC-
Confidence                           67999999999999998876   4899999999999766521   1111000      111112 


Q ss_pred             cccccHHHHHHHHHhhhcCc--CCCCeEEeeccccc
Q 043792          238 MASVDLRFYVDAHICVFEDV--SSYGRYLCFNHVIN  271 (294)
Q Consensus       238 ~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~~~~s  271 (294)
                       .+..++|+|++++.++...  ..+|+.+..++.+|
T Consensus       215 -R~~~pedvA~~v~fL~S~~a~~itG~~i~vDGG~t  249 (251)
T d1vl8a_         215 -RTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGWT  249 (251)
T ss_dssp             -SCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             -CCCCHHHHHHHHHHHhCchhCCCcCcEEEeCcCee
Confidence             2678899999999988643  34677665555443

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.92  E-value=2.9e-23  Score=168.64  Aligned_cols=215  Identities=16%  Similarity=0.076  Sum_probs=155.2

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++|++|||||++.||+.+++.|+++|++|++++|+.++.+.+.++       -+..++.+|++|+++++++++      
T Consensus         3 L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~-------~~~~~~~~Dv~~~~~v~~~~~~~~~~~   75 (242)
T d1ulsa_           3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEA-------VGAHPVVMDVADPASVERGFAEALAHL   75 (242)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT-------TTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-------cCCeEEEEecCCHHHHHHHHHHHHHhc
Confidence            4679999999999999999999999999999999987666655542       257889999999998887764      


Q ss_pred             -cCCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                       ++|++|||||........      .++.+++|+.++.++.+++.+.   ++..+++++||.+  ..+...    .    
T Consensus        76 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~--~~~~~~----~----  145 (242)
T d1ulsa_          76 GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV--YLGNLG----Q----  145 (242)
T ss_dssp             SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG--GGCCTT----C----
T ss_pred             CCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecccc--ccCCCC----C----
Confidence             479999999976543221      1388999999999998887654   2445677777753  212111    1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-cccccccccCCCccccccH
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YLKGAAEMYEDGVMASVDL  243 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~v~v  243 (294)
                                    ..|+.+|.+.+.+.+.++.+   +|+++.+|.||.+-.+....... ..+......+-+  .+...
T Consensus       146 --------------~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~--R~~~p  209 (242)
T d1ulsa_         146 --------------ANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLG--RAGKP  209 (242)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTC--SCBCH
T ss_pred             --------------cchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHHHHHHHHhcCCCC--CCCCH
Confidence                          77999999999999988866   47999999999997665321110 000000111112  27789


Q ss_pred             HHHHHHHHhhhcCc--CCCCeEEeeccccc
Q 043792          244 RFYVDAHICVFEDV--SSYGRYLCFNHVIN  271 (294)
Q Consensus       244 ~D~a~~i~~~~~~~--~~~~~~~~~~~~~s  271 (294)
                      +|+|.+++.++...  ..+|+.+..++.++
T Consensus       210 edia~~v~fL~S~~s~~itG~~i~vDGG~t  239 (242)
T d1ulsa_         210 LEVAYAALFLLSDESSFITGQVLFVDGGRT  239 (242)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHHHhchhhCCCCCcEEEECCCcc
Confidence            99999999998543  34677665554443

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.91  E-value=1.9e-23  Score=170.69  Aligned_cols=220  Identities=12%  Similarity=0.026  Sum_probs=157.6

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++|++|||||++.||+.+++.|+++|++|++.+|+.+..+.+.+++   ....++.++.+|++|+++++++++      
T Consensus         4 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (251)
T d1zk4a1           4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSV---GTPDQIQFFQHDSSDEDGWTKLFDATEKAF   80 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CCTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999999999887777666632   345579999999999998887765      


Q ss_pred             -cCCEEEecCCCCCCCCcc----h--hhhHhHhhHHHHHHHHHHHhc---CCC-cEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHSTY----D--ELTAEVETMAAHNVLEACAQT---NTV-DKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~~----~--~~~~~~n~~~~~~ll~~~~~~---~~~-~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                       ++|++||||+........    +  ++.+++|+.++.++.+++.+.   ++. .++|++||..+......     .   
T Consensus        81 G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~-----~---  152 (251)
T d1zk4a1          81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPS-----L---  152 (251)
T ss_dssp             SSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTT-----C---
T ss_pred             CCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCC-----c---
Confidence             479999999875443211    1  278999999999998886544   233 48999999764321111     1   


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh-----cCCeEEEEecCceeCCCCCCCCc--cccccccccCCCccc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD-----RGISMVSINGGLVMGPDVTISNP--YLKGAAEMYEDGVMA  239 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~ilrp~~i~G~~~~~~~~--~~~~~~~~~~~~~~~  239 (294)
                                     ..|+.+|.+.+.+.+.++.+     +|+++.+|.||.|..+.......  .........+-+  .
T Consensus       153 ---------------~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~pl~--R  215 (251)
T d1zk4a1         153 ---------------GAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMG--H  215 (251)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTS--S
T ss_pred             ---------------hhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHHHHhCCCCC--C
Confidence                           68999999999888877643     47999999999996553111000  000000011111  2


Q ss_pred             cccHHHHHHHHHhhhcCcC--CCCeEEeeccccc
Q 043792          240 SVDLRFYVDAHICVFEDVS--SYGRYLCFNHVIN  271 (294)
Q Consensus       240 ~v~v~D~a~~i~~~~~~~~--~~~~~~~~~~~~s  271 (294)
                      +..++|+|.++++++....  .+|+.+..++.+|
T Consensus       216 ~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~t  249 (251)
T d1zk4a1         216 IGEPNDIAYICVYLASNESKFATGSEFVVDGGYT  249 (251)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CcCHHHHHHHHHHHhCchhCCCcCcEEEECcccc
Confidence            7789999999999986433  4677655554443

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.91  E-value=8.5e-24  Score=171.23  Aligned_cols=210  Identities=14%  Similarity=0.075  Sum_probs=150.2

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      +.++|++|||||++.||+.+++.|+++|++|++++|+.+..             .++..+.+|++|+++++++++     
T Consensus         4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-------------~~~~~~~~Dv~~~~~v~~~~~~~~~~   70 (237)
T d1uzma1           4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP-------------KGLFGVEVDVTDSDAVDRAFTAVEEH   70 (237)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-------------TTSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh-------------cCceEEEEecCCHHHHHHHHHHHHHh
Confidence            56789999999999999999999999999999999987542             357789999999998887765     


Q ss_pred             --cCCEEEecCCCCCCCCc----c--hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHST----Y--DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~~----~--~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                        .+|++|||||.......    .  .++.+++|+.++..+.+++.+.   ++-.++|++||..+.......        
T Consensus        71 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~--------  142 (237)
T d1uzma1          71 QGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQ--------  142 (237)
T ss_dssp             HSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CC--------
T ss_pred             cCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCccc--------
Confidence              47999999987543211    1  1388999999998887765433   255699999998643322211        


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-cccccccccCCCcccccc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YLKGAAEMYEDGVMASVD  242 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~v~  242 (294)
                                     ..|+.+|.+.+.+.+.++.+   +|+++.+|.||.+..+....... ..+......+-++  +..
T Consensus       143 ---------------~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R--~~~  205 (237)
T d1uzma1         143 ---------------ANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKR--VGT  205 (237)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTCS--CBC
T ss_pred             ---------------HHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHHHHHHHHhcCCCCC--CcC
Confidence                           78999999999999988876   48999999999996553111000 0000001112222  778


Q ss_pred             HHHHHHHHHhhhcCc--CCCCeEEeecccc
Q 043792          243 LRFYVDAHICVFEDV--SSYGRYLCFNHVI  270 (294)
Q Consensus       243 v~D~a~~i~~~~~~~--~~~~~~~~~~~~~  270 (294)
                      .+|+|.++++++...  ..+|+.+..++.+
T Consensus       206 pedvA~~v~fL~S~~s~~itG~~i~vdGG~  235 (237)
T d1uzma1         206 PAEVAGVVSFLASEDASYISGAVIPVDGGM  235 (237)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHHHHHhCchhcCCcCCeEEECCCC
Confidence            999999999998644  3467765554433

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.5e-23  Score=170.74  Aligned_cols=216  Identities=17%  Similarity=0.069  Sum_probs=157.6

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc---cC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK---GC   99 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---~~   99 (294)
                      ..++|++|||||++.||+++++.|+++|++|++++|+.++.+.+..+      ..++..+.+|++|+++++++++   ++
T Consensus         4 ~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~------~~~~~~~~~Dv~d~~~v~~~~~~~g~i   77 (244)
T d1pr9a_           4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE------CPGIEPVCVDLGDWEATERALGSVGPV   77 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH------STTCEEEECCTTCHHHHHHHHTTCCCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHh------cCCCeEEEEeCCCHHHHHHHHHHhCCc
Confidence            45789999999999999999999999999999999987766665552      2468899999999999998886   47


Q ss_pred             CEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc----CCCcEEEEecCcceeeeCCCCCCCCCCCCCCC
Q 043792          100 SGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT----NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDER  169 (294)
Q Consensus       100 d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~  169 (294)
                      |++||||+........      .+..+++|+.++..+.+++.+.    ++-.++|++||..+.......           
T Consensus        78 DilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~-----------  146 (244)
T d1pr9a_          78 DLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNH-----------  146 (244)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTB-----------
T ss_pred             eEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccch-----------
Confidence            9999999876543221      1388999999998888876542    245689999998642221111           


Q ss_pred             CCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc---cccccccccCCCccccccH
Q 043792          170 NWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP---YLKGAAEMYEDGVMASVDL  243 (294)
Q Consensus       170 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~---~~~~~~~~~~~~~~~~v~v  243 (294)
                                  ..|+.+|.+.+.+.+.++.+   +++++.+|.||.|..+.......   ..+......+-+  .+...
T Consensus       147 ------------~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~--R~~~p  212 (244)
T d1pr9a_         147 ------------SVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLG--KFAEV  212 (244)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTC--SCBCH
T ss_pred             ------------hhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCC--CCcCH
Confidence                        67999999999999998866   48999999999997554111000   000000111112  27889


Q ss_pred             HHHHHHHHhhhcCc--CCCCeEEeeccc
Q 043792          244 RFYVDAHICVFEDV--SSYGRYLCFNHV  269 (294)
Q Consensus       244 ~D~a~~i~~~~~~~--~~~~~~~~~~~~  269 (294)
                      +|+|++++.++...  ..+|+.+..++.
T Consensus       213 eevA~~v~fL~S~~a~~itG~~i~vDGG  240 (244)
T d1pr9a_         213 EHVVNAILFLLSDRSGMTTGSTLPVEGG  240 (244)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHhCchhCCcCCcEEEECcc
Confidence            99999999998643  346776555444

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.91  E-value=2.1e-23  Score=170.38  Aligned_cols=216  Identities=13%  Similarity=0.018  Sum_probs=155.1

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++|++|||||++.||+++++.|+++|++|++++|+.++.+.+.++     ...++.++.+|++|+++++++++     
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   76 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARE-----LGDAARYQHLDVTIEEDWQRVVAYAREE   76 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT-----TGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-----hCCceEEEEcccCCHHHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999987666655542     23478999999999998887775     


Q ss_pred             --cCCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                        .+|++||||+........      .++.+++|+.++.++.+++.+.   ++-.++|++||..+.......        
T Consensus        77 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~--------  148 (254)
T d1hdca_          77 FGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALT--------  148 (254)
T ss_dssp             HSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC--------
T ss_pred             cCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccch--------
Confidence              579999999876543221      1278999999999998877543   245799999998643322111        


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCC-ccccccccccCCCcccc-c
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISN-PYLKGAAEMYEDGVMAS-V  241 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~-v  241 (294)
                                     ..|+.+|.+.+.+.+.++.+   +|+++.+|.||.+..+...... ...+......+-++  + .
T Consensus       149 ---------------~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R--~g~  211 (254)
T d1hdca_         149 ---------------SSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGR--VGN  211 (254)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSS--CB-
T ss_pred             ---------------hhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHHHHHHhCCCCCC--CCC
Confidence                           78999999999999998876   4799999999999654311000 01111101111111  3 3


Q ss_pred             cHHHHHHHHHhhhcCc--CCCCeEEeecc
Q 043792          242 DLRFYVDAHICVFEDV--SSYGRYLCFNH  268 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~--~~~~~~~~~~~  268 (294)
                      ..+|+|.+++.++...  ..+|+.+..++
T Consensus       212 ~PedvA~~v~fL~S~~a~~itG~~i~vDG  240 (254)
T d1hdca_         212 EPGEIAGAVVKLLSDTSSYVTGAELAVDG  240 (254)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CHHHHHHHHHHHhchhhCCCCCceEEeCC
Confidence            5799999999998543  34677554443

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.91  E-value=2.2e-23  Score=171.04  Aligned_cols=222  Identities=13%  Similarity=0.052  Sum_probs=157.3

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------   97 (294)
                      ++|++|||||++.||+.+++.|+++|++|++.+|+.++.+.+..++.....+.++..+.+|++|+++++++++       
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   82 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   82 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            5799999999999999999999999999999999987766655543233445578899999999999887764       


Q ss_pred             cCCEEEecCCCCCCCC-----cch--hhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 GCSGLFYSFEPPSDHS-----TYD--ELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~-----~~~--~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                      .+|++|||||......     +.+  ++.+++|+.++.++.+++...   ++-.++|++||..+......     .    
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~-----~----  153 (258)
T d1iy8a_          83 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGN-----Q----  153 (258)
T ss_dssp             CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSS-----B----
T ss_pred             CCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCC-----c----
Confidence            4799999998643221     111  388999999999998876433   24468999999864322111     1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-cccccc-----cccCC-Cc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YLKGAA-----EMYED-GV  237 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~~~~~-----~~~~~-~~  237 (294)
                                    ..|+.+|.+.+.+.+.++.+   +|+++.+|.||.+..+....... ......     ..... ..
T Consensus       154 --------------~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl  219 (258)
T d1iy8a_         154 --------------SGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPS  219 (258)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTT
T ss_pred             --------------hHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCC
Confidence                          78999999999999988876   47999999999996553110000 000000     01111 11


Q ss_pred             cccccHHHHHHHHHhhhcCc--CCCCeEEeeccc
Q 043792          238 MASVDLRFYVDAHICVFEDV--SSYGRYLCFNHV  269 (294)
Q Consensus       238 ~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~~~  269 (294)
                      ..+...+|+|.+++.++...  ..+|+.+..++.
T Consensus       220 ~R~~~p~dvA~~v~fL~S~~s~~itG~~i~VDGG  253 (258)
T d1iy8a_         220 KRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGG  253 (258)
T ss_dssp             CSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCCcCceEEcCcc
Confidence            12778999999999998643  346775554443

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.91  E-value=6.7e-23  Score=167.00  Aligned_cols=214  Identities=15%  Similarity=0.023  Sum_probs=153.1

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++|++|||||++.||+.+++.|+++|++|.+.+|+.+..+...+   .     +..++++|++|+++++++++      
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~---~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~   74 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEA---I-----GGAFFQVDLEDERERVRFVEEAAYAL   74 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHH---H-----TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---c-----CCeEEEEeCCCHHHHHHHHHHHHHhc
Confidence            468999999999999999999999999999999998765443333   2     56788999999988877765      


Q ss_pred             -cCCEEEecCCCCCCCCc---c---hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHST---Y---DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~---~---~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                       ++|++|||||.......   .   .++.+++|+.++.++.+++.+.   ++-.++|++||..+.......         
T Consensus        75 G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~---------  145 (248)
T d2d1ya1          75 GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQEN---------  145 (248)
T ss_dssp             SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTB---------
T ss_pred             CCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccccccccccc---------
Confidence             57999999987543221   1   1378999999999998887654   245699999998643221111         


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCC-------CccccccccccCCCc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTIS-------NPYLKGAAEMYEDGV  237 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~-------~~~~~~~~~~~~~~~  237 (294)
                                    ..|+.+|.+.+.+.+.++.+   +|+++.+|.||.+-.+.....       ....+......+-+ 
T Consensus       146 --------------~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~-  210 (248)
T d2d1ya1         146 --------------AAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALR-  210 (248)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTS-
T ss_pred             --------------chhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCC-
Confidence                          78999999999999988876   489999999999965431000       00000000111111 


Q ss_pred             cccccHHHHHHHHHhhhcCc--CCCCeEEeecccc
Q 043792          238 MASVDLRFYVDAHICVFEDV--SSYGRYLCFNHVI  270 (294)
Q Consensus       238 ~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~~~~  270 (294)
                       .+...+|+|.+++.++...  ..+|+.+..++.+
T Consensus       211 -R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~  244 (248)
T d2d1ya1         211 -RLGKPEEVAEAVLFLASEKASFITGAILPVDGGM  244 (248)
T ss_dssp             -SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             -CCcCHHHHHHHHHHHhCchhcCCCCcEEEcCcCc
Confidence             2778999999999998643  3467755544443

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.91  E-value=7.2e-23  Score=169.11  Aligned_cols=221  Identities=14%  Similarity=0.052  Sum_probs=158.6

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++|++|||||++.||+.+++.|+++|++|++++|+.++.+.+.+++   .....+.++.+|++|+++++++++      
T Consensus         4 L~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l---~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (268)
T d2bgka1           4 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNI---GSPDVISFVHCDVTKDEDVRNLVDTTIAKH   80 (268)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CCTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---cCCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999887777766642   334568889999999999888775      


Q ss_pred             -cCCEEEecCCCCCCCC-----cc---hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHS-----TY---DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~-----~~---~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                       ++|++|||||......     ..   .+..+++|+.++..+.+++.+.   ++-.++|++||..+...+...    .  
T Consensus        81 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~----~--  154 (268)
T d2bgka1          81 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGV----S--  154 (268)
T ss_dssp             SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTS----C--
T ss_pred             CCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccccccc----c--
Confidence             5799999998644321     11   1378999999999988876543   245689999997643322211    1  


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccc-c---ccCCCcc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAA-E---MYEDGVM  238 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~-~---~~~~~~~  238 (294)
                                      ..|+.+|.+.+.+.+.++.+   +|+++.+|.||.+..+........-.... .   .......
T Consensus       155 ----------------~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~g  218 (268)
T d2bgka1         155 ----------------HVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKG  218 (268)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCS
T ss_pred             ----------------cccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCC
Confidence                            47999999999999998866   48999999999998776322110000000 0   0001111


Q ss_pred             ccccHHHHHHHHHhhhcCc--CCCCeEEeeccc
Q 043792          239 ASVDLRFYVDAHICVFEDV--SSYGRYLCFNHV  269 (294)
Q Consensus       239 ~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~~~  269 (294)
                      .+...+|+|++++.++...  ..+|+.+..++.
T Consensus       219 r~~~pedvA~~v~fL~S~~s~~itGq~i~VDGG  251 (268)
T d2bgka1         219 TLLRAEDVADAVAYLAGDESKYVSGLNLVIDGG  251 (268)
T ss_dssp             CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHhChhhCCccCceEEECcC
Confidence            2778999999999998643  346776554443

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.91  E-value=3e-23  Score=170.30  Aligned_cols=221  Identities=14%  Similarity=0.072  Sum_probs=147.9

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      +.++|++|||||++.||+.+++.|+++|++|++++|+.++.+.+.+++  .....++..+.+|++++++++++++     
T Consensus         5 ~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~--~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d1xq1a_           5 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKW--QKKGFQVTGSVCDASLRPEREKLMQTVSSM   82 (259)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--HHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH--HhcCCceEEEeccCCCHHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999987776665543  2344578999999999988776653     


Q ss_pred             ---cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                         .+|++||||+.......      ..++.+++|+.++..+.+++.+.   ++-.++|++||..+.......       
T Consensus        83 ~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~-------  155 (259)
T d1xq1a_          83 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVG-------  155 (259)
T ss_dssp             HTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------C-------
T ss_pred             hCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccccccc-------
Confidence               37999999987543211      12388999999999988876543   245699999998643322211       


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc--cccccccccCCCcccc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP--YLKGAAEMYEDGVMAS  240 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~--~~~~~~~~~~~~~~~~  240 (294)
                                      ..|+.+|.+.+.+.+.++.+   +|+++.+|.||.|-.+.......  ..+......+-+  .+
T Consensus       156 ----------------~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~pl~--R~  217 (259)
T d1xq1a_         156 ----------------SIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLG--RF  217 (259)
T ss_dssp             ----------------CHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC---------------------------
T ss_pred             ----------------ccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHHHHHHhCCCCC--CC
Confidence                            68999999999999998876   48999999999997665221110  100000111111  16


Q ss_pred             ccHHHHHHHHHhhhcCc--CCCCeEEeecccc
Q 043792          241 VDLRFYVDAHICVFEDV--SSYGRYLCFNHVI  270 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~--~~~~~~~~~~~~~  270 (294)
                      ...+|+|.+++.++...  ..+|+.+..++.+
T Consensus       218 ~~pedvA~~v~fL~S~~s~~iTG~~i~vDGG~  249 (259)
T d1xq1a_         218 GEPEEVSSLVAFLCMPAASYITGQTICVDGGL  249 (259)
T ss_dssp             CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCE
T ss_pred             cCHHHHHHHHHHHhCchhcCCcCcEEEeCCCE
Confidence            78899999999998543  3467765554443

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.91  E-value=1.6e-22  Score=164.82  Aligned_cols=218  Identities=15%  Similarity=0.023  Sum_probs=150.8

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++|+++||||++.||+.+++.|+++|++|++.+|++.+..  ...  ....+.++..+.+|++|+++++++++      
T Consensus         3 L~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~--~~~--~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~   78 (247)
T d2ew8a1           3 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEA--EAA--IRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF   78 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHH--HHH--HHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHH--HHH--HHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            35799999999999999999999999999999999765321  111  22345678999999999998887764      


Q ss_pred             -cCCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                       ++|++|||||........      .++.+++|+.++.++.+++.+.   ++-.++|++||..+.......         
T Consensus        79 G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~---------  149 (247)
T d2ew8a1          79 GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAY---------  149 (247)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSC---------
T ss_pred             CCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCccc---------
Confidence             579999999986543221      1388999999999998876543   244689999998643222111         


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc--cccccccccCCCcccccc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP--YLKGAAEMYEDGVMASVD  242 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~--~~~~~~~~~~~~~~~~v~  242 (294)
                                    ..|+.+|.+.+.+.+.++.+   +|+++.+|.||.|..+.......  ..+...... .....+..
T Consensus       150 --------------~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~-~~l~r~~~  214 (247)
T d2ew8a1         150 --------------THYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNML-QAIPRLQV  214 (247)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTT-SSSCSCCC
T ss_pred             --------------ccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHHh-ccCCCCCC
Confidence                          68999999999999998876   47999999999997665321110  000000000 01112677


Q ss_pred             HHHHHHHHHhhhcCcC--CCCeEEeeccc
Q 043792          243 LRFYVDAHICVFEDVS--SYGRYLCFNHV  269 (294)
Q Consensus       243 v~D~a~~i~~~~~~~~--~~~~~~~~~~~  269 (294)
                      .+|+|++++.++....  .+|+.+..++.
T Consensus       215 pedvA~~v~fL~S~~s~~itG~~i~vDGG  243 (247)
T d2ew8a1         215 PLDLTGAAAFLASDDASFITGQTLAVDGG  243 (247)
T ss_dssp             THHHHHHHHHHTSGGGTTCCSCEEEESSS
T ss_pred             HHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence            8999999999986433  46775554443

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.91  E-value=5.1e-23  Score=168.81  Aligned_cols=222  Identities=14%  Similarity=0.016  Sum_probs=158.0

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      +.++|++|||||++.||+.+++.|+++|++|++++|++++.+.+.+++  ......+.++.+|+++.++++++++     
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~--~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   80 (258)
T d1ae1a_           3 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIW--REKGLNVEGSVCDLLSRTERDKLMQTVAHV   80 (258)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--HHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH--HhcCCCceEEEeecCCHHHHHHHHHHHHHH
Confidence            356899999999999999999999999999999999987766665542  2345678889999999998877653     


Q ss_pred             ---cCCEEEecCCCCCCCCc------chhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHST------YDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~~------~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                         .+|++||+|+.......      ...+.+++|+.++..+.+++...   ++..++|++||..+.......       
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~-------  153 (258)
T d1ae1a_          81 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSV-------  153 (258)
T ss_dssp             TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTC-------
T ss_pred             hCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccc-------
Confidence               26999999887554322      12388999999999988876543   356799999998643321111       


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc---cccccc----cccCC
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP---YLKGAA----EMYED  235 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~---~~~~~~----~~~~~  235 (294)
                                      ..|+.+|.+.+.+.+.++.+.   |+++.+|.||.+..+.......   ..+...    ...+-
T Consensus       154 ----------------~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl  217 (258)
T d1ae1a_         154 ----------------SLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM  217 (258)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT
T ss_pred             ----------------hhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCC
Confidence                            789999999999999998774   7999999999998765221110   000000    01112


Q ss_pred             CccccccHHHHHHHHHhhhcCc--CCCCeEEeeccccc
Q 043792          236 GVMASVDLRFYVDAHICVFEDV--SSYGRYLCFNHVIN  271 (294)
Q Consensus       236 ~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~~~~s  271 (294)
                      ++  +...+|+|.+++.++...  ..+|+.+..++.+|
T Consensus       218 gR--~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~s  253 (258)
T d1ae1a_         218 GR--AGKPQEVSALIAFLCFPAASYITGQIIWADGGFT  253 (258)
T ss_dssp             CS--CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CC--CcCHHHHHHHHHHHhChhhCCCcCcEEEeCCCee
Confidence            22  789999999999999543  34777665554443

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.91  E-value=4.3e-23  Score=169.74  Aligned_cols=221  Identities=12%  Similarity=0.016  Sum_probs=155.0

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC-ChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG-KLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      ++|++|||||++.||+.+++.|+++|++|++.+|+.. ..+.+.+++ ....+.++.++.+|++|+++++++++      
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~-~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGL-AAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHH-HHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHH-HHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            5789999999999999999999999999999999753 344444322 11234578899999999999888875      


Q ss_pred             -cCCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                       ++|++|||||........      .++.+++|+.++.++.+++.+.   ++-.++|++||..+.......         
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~---------  152 (260)
T d1x1ta1          82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANK---------  152 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC---------
T ss_pred             CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCc---------
Confidence             479999999976543221      1388999999998888876544   244699999998643321111         


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-ccccc--c----------c
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YLKGA--A----------E  231 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~~~~--~----------~  231 (294)
                                    ..|+.+|.+.+.+.+.++.+   +|+++.+|.||.|-.+....... ..+..  .          .
T Consensus       153 --------------~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (260)
T d1x1ta1         153 --------------SAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSE  218 (260)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHH
T ss_pred             --------------chhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHh
Confidence                          67999999999999998876   47999999999997664221110 00000  0          0


Q ss_pred             ccCCCccccccHHHHHHHHHhhhcCc--CCCCeEEeeccccc
Q 043792          232 MYEDGVMASVDLRFYVDAHICVFEDV--SSYGRYLCFNHVIN  271 (294)
Q Consensus       232 ~~~~~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~~~~s  271 (294)
                      ..+-+  .+...+|+|.++++++...  ..+|+.+..++.+|
T Consensus       219 ~~Pl~--R~g~pediA~~v~fL~S~~a~~itG~~i~vDGG~t  258 (260)
T d1x1ta1         219 KQPSL--QFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGWT  258 (260)
T ss_dssp             HCTTC--CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             cCCCC--CCcCHHHHHHHHHHHhChhhCCCcCCEEEECcchh
Confidence            11111  2778999999999998643  34677665555444

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=2.7e-23  Score=170.19  Aligned_cols=220  Identities=12%  Similarity=0.014  Sum_probs=158.3

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++|++|||||++.||+++++.|+++|++|++.+|+.++.+.+.+++  ...+.++.++.+|++|+++++++++     
T Consensus         8 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l--~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~   85 (255)
T d1fmca_           8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEI--QQLGGQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHH--HHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH--HHcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            356899999999999999999999999999999999887777666643  2345678899999999988877764     


Q ss_pred             --cCCEEEecCCCCCCCCc---c--hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHST---Y--DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~~---~--~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                        ++|++|||||.......   .  .++.+++|+.++.++.+++.+.   ++-.++|++||..+.......         
T Consensus        86 ~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~---------  156 (255)
T d1fmca_          86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINM---------  156 (255)
T ss_dssp             HSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTC---------
T ss_pred             cCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhcccccc---------
Confidence              57999999987543321   1  1388999999999888876544   244689999997633221111         


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc--cccccccccCCCcccccc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP--YLKGAAEMYEDGVMASVD  242 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~--~~~~~~~~~~~~~~~~v~  242 (294)
                                    ..|+.+|.+.+.+.+.++.+   +|+++.+|.||.|..+.......  ..+......+-+  .+..
T Consensus       157 --------------~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl~--R~g~  220 (255)
T d1fmca_         157 --------------TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIR--RLGQ  220 (255)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSC--SCBC
T ss_pred             --------------ccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCCC--CCcC
Confidence                          78999999999999998876   48999999999996543111000  000000111112  2778


Q ss_pred             HHHHHHHHHhhhcCc--CCCCeEE-eeccc
Q 043792          243 LRFYVDAHICVFEDV--SSYGRYL-CFNHV  269 (294)
Q Consensus       243 v~D~a~~i~~~~~~~--~~~~~~~-~~~~~  269 (294)
                      ++|+|.+++.++...  ..+|+.+ +.++.
T Consensus       221 pedvA~~v~fL~S~~s~~itG~~i~vDGG~  250 (255)
T d1fmca_         221 PQDIANAALFLCSPAASWVSGQILTVSGGG  250 (255)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHHHHHHHHHhCchhcCCcCCEEEECcCc
Confidence            999999999998643  3467754 44443

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.91  E-value=7.3e-23  Score=168.05  Aligned_cols=222  Identities=13%  Similarity=0.035  Sum_probs=156.7

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC-ChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG-KLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      ..++|+++||||++.||+++++.|+++|++|++.+|+.+ ..+.+.+++  ...+.++..+.+|++|+++++++++    
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~--~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEI--KKVGGEAIAVKGDVTVESDVINLVQSAIK   81 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH--HHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHH--HhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999864 344444432  2345578899999999998887775    


Q ss_pred             ---cCCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc----CCCcEEEEecCcceeeeCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT----NTVDKVVFTSSLTAVVWNNHRDNPTSH  164 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~  164 (294)
                         ++|++||||+........      .++.+++|+.++.++.+++.+.    +.-.++|++||.++.......      
T Consensus        82 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~------  155 (261)
T d1geea_          82 EFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLF------  155 (261)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTC------
T ss_pred             HhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccc------
Confidence               579999999876543221      1388999999999888876543    223468899997632211111      


Q ss_pred             CCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCC--c-cccccccccCCCcc
Q 043792          165 DFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISN--P-YLKGAAEMYEDGVM  238 (294)
Q Consensus       165 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~--~-~~~~~~~~~~~~~~  238 (294)
                                       ..|+.+|.+.+.+.+.++.+   +|+++.+|.||.|..+......  . ..+......+-+  
T Consensus       156 -----------------~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~--  216 (261)
T d1geea_         156 -----------------VHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMG--  216 (261)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTS--
T ss_pred             -----------------cccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCC--
Confidence                             67999999999999998866   4899999999999655411000  0 000000111112  


Q ss_pred             ccccHHHHHHHHHhhhcCcC--CCCeEEeeccccc
Q 043792          239 ASVDLRFYVDAHICVFEDVS--SYGRYLCFNHVIN  271 (294)
Q Consensus       239 ~~v~v~D~a~~i~~~~~~~~--~~~~~~~~~~~~s  271 (294)
                      .+..++|+|.+++.++....  .+|+.+..++.++
T Consensus       217 R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~s  251 (261)
T d1geea_         217 YIGEPEEIAAVAAWLASSEASYVTGITLFADGGMT  251 (261)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCee
Confidence            27789999999999986433  4677655554443

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.91  E-value=2.5e-23  Score=169.04  Aligned_cols=216  Identities=17%  Similarity=0.087  Sum_probs=155.4

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc---cC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK---GC   99 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---~~   99 (294)
                      ..++|++|||||++.||+.+++.|+++|++|++++|+.++.+.+.++      ..++..+.+|++|+++++++++   ++
T Consensus         2 dl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~~g~i   75 (242)
T d1cyda_           2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE------CPGIEPVCVDLGDWDATEKALGGIGPV   75 (242)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH------STTCEEEECCTTCHHHHHHHHTTCCCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHh------cCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence            35689999999999999999999999999999999987666655542      2468899999999999999987   46


Q ss_pred             CEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc----CCCcEEEEecCcceeeeCCCCCCCCCCCCCCC
Q 043792          100 SGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT----NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDER  169 (294)
Q Consensus       100 d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~  169 (294)
                      |++||||+........      .+..+++|+.++..+.+++.+.    +.-.++|++||..+......     .      
T Consensus        76 DilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~-----~------  144 (242)
T d1cyda_          76 DLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPN-----L------  144 (242)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT-----B------
T ss_pred             eEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCc-----c------
Confidence            9999999875543211      1388999999999998865432    23468999999753221111     1      


Q ss_pred             CCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCC--c-cccccccccCCCccccccH
Q 043792          170 NWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISN--P-YLKGAAEMYEDGVMASVDL  243 (294)
Q Consensus       170 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~--~-~~~~~~~~~~~~~~~~v~v  243 (294)
                                  ..|+.+|.+.+.+.+.++.+   +|+++.+|.||.+..+......  . ..+......+-++  +...
T Consensus       145 ------------~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R--~~~p  210 (242)
T d1cyda_         145 ------------ITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRK--FAEV  210 (242)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSS--CBCH
T ss_pred             ------------ccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCC--CcCH
Confidence                        67999999999999998876   4799999999999654310000  0 0000001111122  7789


Q ss_pred             HHHHHHHHhhhcCc--CCCCeEEeeccc
Q 043792          244 RFYVDAHICVFEDV--SSYGRYLCFNHV  269 (294)
Q Consensus       244 ~D~a~~i~~~~~~~--~~~~~~~~~~~~  269 (294)
                      +|+|++++.++...  ..+|+.+..++.
T Consensus       211 eeva~~v~fL~S~~s~~itG~~i~vDGG  238 (242)
T d1cyda_         211 EDVVNSILFLLSDRSASTSGGGILVDAG  238 (242)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSSEEEESTT
T ss_pred             HHHHHHHHHHhCchhcCcCCceEEeCcc
Confidence            99999999998543  346765544433

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.90  E-value=4.4e-23  Score=169.33  Aligned_cols=220  Identities=13%  Similarity=0.035  Sum_probs=158.4

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      +.++|++|||||++.||+.+++.|+++|++|++.+|+.++.+.+.+++  ...+.++.++.+|++|+++++++++     
T Consensus         5 ~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~--~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d2ae2a_           5 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQW--RSKGFKVEASVCDLSSRSERQELMNTVANH   82 (259)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--HHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH--HhcCCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999887776665543  2345678899999999988876653     


Q ss_pred             ---cCCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                         .+|++||||+........      .++.+++|+.++.++.+++.+.   ++-.++|++||..+.......       
T Consensus        83 ~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~-------  155 (259)
T d2ae2a_          83 FHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYE-------  155 (259)
T ss_dssp             TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTC-------
T ss_pred             hCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccc-------
Confidence               379999999975543221      1388999999999988876543   245699999998643221111       


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCC-c-----cccccccccCCC
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISN-P-----YLKGAAEMYEDG  236 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~-~-----~~~~~~~~~~~~  236 (294)
                                      ..|+.+|.+.+.+.+.++.+   +++++.+|.||.|..+...... .     ..+......+-+
T Consensus       156 ----------------~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~  219 (259)
T d2ae2a_         156 ----------------AVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALR  219 (259)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTC
T ss_pred             ----------------cchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCC
Confidence                            78999999999999998876   4799999999999654311000 0     000000011112


Q ss_pred             ccccccHHHHHHHHHhhhcCc--CCCCeEEeeccc
Q 043792          237 VMASVDLRFYVDAHICVFEDV--SSYGRYLCFNHV  269 (294)
Q Consensus       237 ~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~~~  269 (294)
                        .+..++|+|.+++.++...  ..+|+.+..++.
T Consensus       220 --R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  252 (259)
T d2ae2a_         220 --RMGEPKELAAMVAFLCFPAASYVTGQIIYVDGG  252 (259)
T ss_dssp             --SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             --CCcCHHHHHHHHHHHhCchhCCCcCcEEEECCC
Confidence              2778999999999998643  346776555443

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=4.1e-23  Score=167.69  Aligned_cols=199  Identities=15%  Similarity=0.020  Sum_probs=152.7

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      +..++.++||||++.||+++++.|+++|++|++++|+.++.+.+.+++  ...+.++..+.+|++|++++.++++     
T Consensus         4 ~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~--~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~   81 (244)
T d1yb1a_           4 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKC--KGLGAKVHTFVVDCSNREDIYSSAKKVKAE   81 (244)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--HHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH--HhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999988877776653  2345678999999999998887764     


Q ss_pred             --cCCEEEecCCCCCCCCcch------hhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHSTYD------ELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~~~~------~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                        ++|++||||+........+      ++++++|+.++.++.+++.+.   ++-.++|++||..+......         
T Consensus        82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~---------  152 (244)
T d1yb1a_          82 IGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPF---------  152 (244)
T ss_dssp             TCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHH---------
T ss_pred             cCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCC---------
Confidence              4799999999865443322      288999999999988876544   35579999999864321111         


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh------cCCeEEEEecCceeCCCCCCCCccccccccccCCCcccc
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD------RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMAS  240 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~------~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~  240 (294)
                                    ...|+.||.+.+.+.+.++.+      .|++++++.||.|-.+.       .+.....    ...+
T Consensus       153 --------------~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~-------~~~~~~~----~~~~  207 (244)
T d1yb1a_         153 --------------LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGF-------IKNPSTS----LGPT  207 (244)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCS-------TTCTHHH----HCCC
T ss_pred             --------------cHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChh-------hhCcCcc----ccCC
Confidence                          167999999999999998865      37999999999885443       1211111    1125


Q ss_pred             ccHHHHHHHHHhhhcCc
Q 043792          241 VDLRFYVDAHICVFEDV  257 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~  257 (294)
                      +..+|+|+.++..+..+
T Consensus       208 ~~pe~va~~i~~~~~~~  224 (244)
T d1yb1a_         208 LEPEEVVNRLMHGILTE  224 (244)
T ss_dssp             CCHHHHHHHHHHHHHTT
T ss_pred             CCHHHHHHHHHHHHhcC
Confidence            67899999999887654

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=3.9e-23  Score=168.55  Aligned_cols=214  Identities=14%  Similarity=0.069  Sum_probs=153.5

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++|++|||||++.||+.+++.|+++|++|++++|+.+..+.+.++      ..++.++.+|++|+++++++++      
T Consensus         4 l~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~------~~~~~~~~~Dvs~~~~v~~~~~~~~~~~   77 (250)
T d1ydea1           4 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQE------LPGAVFILCDVTQEDDVKTLVSETIRRF   77 (250)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH------CTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHh------cCCCeEEEccCCCHHHHHHHHHHHHHhc
Confidence            4689999999999999999999999999999999987666665552      2468899999999998888765      


Q ss_pred             -cCCEEEecCCCCCCCCc----c---hhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHST----Y---DELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~----~---~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                       ++|++||||+.......    +   .++.+++|+.++.++.+++.+.  ++-.++|++||..+.......         
T Consensus        78 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~~~---------  148 (250)
T d1ydea1          78 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQA---------  148 (250)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTC---------
T ss_pred             CCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccccccCc---------
Confidence             47999999986432211    1   1388999999999998876644  122589999998643322212         


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCC-----CCc--cccccccccCCCc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTI-----SNP--YLKGAAEMYEDGV  237 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~-----~~~--~~~~~~~~~~~~~  237 (294)
                                    ..|+.+|.+.+.+.+.++.+   +|+++.+|.||.|..+....     ...  ..+......+-+ 
T Consensus       149 --------------~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~-  213 (250)
T d1ydea1         149 --------------VPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLG-  213 (250)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTS-
T ss_pred             --------------chhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCC-
Confidence                          78999999999999998876   48999999999996443100     000  000000011112 


Q ss_pred             cccccHHHHHHHHHhhhcC-cCCCCeEEeecc
Q 043792          238 MASVDLRFYVDAHICVFED-VSSYGRYLCFNH  268 (294)
Q Consensus       238 ~~~v~v~D~a~~i~~~~~~-~~~~~~~~~~~~  268 (294)
                       .+...+|+|.+++.++.+ ...+|+.+..++
T Consensus       214 -R~g~p~eva~~v~fL~Sda~~itG~~i~vDG  244 (250)
T d1ydea1         214 -RMGQPAEVGAAAVFLASEANFCTGIELLVTG  244 (250)
T ss_dssp             -SCBCHHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             -CCCCHHHHHHHHHHHhCccCCCcCCeEEECC
Confidence             278899999999998853 223666554443

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.90  E-value=1.9e-22  Score=165.36  Aligned_cols=213  Identities=12%  Similarity=0.011  Sum_probs=155.0

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++|++|||||++.||+.+++.|+++|++|++.+|+.++.+.+.+++     +.++..+.+|++|+++++++++      
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~-----~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   77 (256)
T d1k2wa_           3 LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI-----GPAACAIALDVTDQASIDRCVAELLDRW   77 (256)
T ss_dssp             TTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCceEEEEeeCCCHHHHHHHHHHHHHHh
Confidence            46799999999999999999999999999999999877766665532     4578999999999999888775      


Q ss_pred             -cCCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc----CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT----NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                       .+|++||||+........      .+..+++|+.++..+.+++.+.    +.-.++|++||.++.......        
T Consensus        78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~--------  149 (256)
T d1k2wa_          78 GSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALV--------  149 (256)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTC--------
T ss_pred             CCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccc--------
Confidence             479999999976543221      1388999999999998865432    234689999998643222111        


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-------cccccc-----c
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-------YLKGAA-----E  231 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-------~~~~~~-----~  231 (294)
                                     ..|+.+|.+.+.+.+.++.+   +|+++.+|.||.+-.+.......       ......     .
T Consensus       150 ---------------~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (256)
T d1k2wa_         150 ---------------GVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGA  214 (256)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHH
T ss_pred             ---------------cchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHh
Confidence                           78999999999999988866   48999999999997664110000       000000     0


Q ss_pred             ccCCCccccccHHHHHHHHHhhhcCc--CCCCeEEee
Q 043792          232 MYEDGVMASVDLRFYVDAHICVFEDV--SSYGRYLCF  266 (294)
Q Consensus       232 ~~~~~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~  266 (294)
                      ..+-++  +...+|+|.+++.++...  ..+|+.+..
T Consensus       215 ~~PlgR--~~~p~evA~~v~fL~S~~a~~iTG~~i~v  249 (256)
T d1k2wa_         215 AVPFGR--MGRAEDLTGMAIFLATPEADYIVAQTYNV  249 (256)
T ss_dssp             HSTTSS--CBCHHHHHHHHHHTTSGGGTTCCSCEEEE
T ss_pred             cCCCCC--CcCHHHHHHHHHHHhCchhCCccCceEEE
Confidence            111122  778999999999988543  346765443

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.90  E-value=8.8e-23  Score=167.55  Aligned_cols=217  Identities=14%  Similarity=0.041  Sum_probs=157.5

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------c
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------G   98 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~   98 (294)
                      +|.+|||||++.||+.+++.|+++|++|++.+|+.+..+.+.+++  ...+.++.++.+|++|+++++++++       +
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l--~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~   79 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKEL--REAGVEADGRTCDVRSVPEIEALVAAVVERYGP   79 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--HHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH--HhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            578899999999999999999999999999999887777666653  2345578999999999998887775       4


Q ss_pred             CCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc-----CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           99 CSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT-----NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~-----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                      +|++|||||........      .++.+++|+.++.++.+++.+.     ++..++|++||..+.......         
T Consensus        80 iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~---------  150 (257)
T d2rhca1          80 VDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHA---------  150 (257)
T ss_dssp             CSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTC---------
T ss_pred             CCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccc---------
Confidence            79999999876543221      1388999999999999987642     244689999997633222111         


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc------------cccccccc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP------------YLKGAAEM  232 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~------------~~~~~~~~  232 (294)
                                    ..|+.+|.+.+.+.+.++.+.   |+++.+|.||.|-.+.......            ..+.....
T Consensus       151 --------------~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~  216 (257)
T d2rhca1         151 --------------APYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITAR  216 (257)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTT
T ss_pred             --------------hhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhc
Confidence                          789999999999999998774   6999999999995443100000            00000011


Q ss_pred             cCCCccccccHHHHHHHHHhhhcCc--CCCCeEEeeccc
Q 043792          233 YEDGVMASVDLRFYVDAHICVFEDV--SSYGRYLCFNHV  269 (294)
Q Consensus       233 ~~~~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~~~  269 (294)
                      .+-+  .+...+|+|++++.++...  ..+|+.+..++.
T Consensus       217 ~Plg--R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG  253 (257)
T d2rhca1         217 VPIG--RYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG  253 (257)
T ss_dssp             STTS--SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CCCC--CCcCHHHHHHHHHHHhCchhcCCcCceEEECcC
Confidence            1112  2788999999999999543  346775544433

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.90  E-value=1.6e-22  Score=166.18  Aligned_cols=215  Identities=16%  Similarity=0.083  Sum_probs=155.5

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++|++|||||++.||+.+++.|+++|++|++++|+.+..+.+.+++  ...+.++..+.+|++|+++++++++      
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~--~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (260)
T d1zema1           3 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASV--REKGVEARSYVCDVTSEEAVIGTVDSVVRDF   80 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--HTTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH--HhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999999999887777666543  3345678999999999988887765      


Q ss_pred             -cCCEEEecCCCCCCCCcc-------hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHSTY-------DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDF  166 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~~-------~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  166 (294)
                       .+|++||+|+........       .++.+++|+.++.++.+++.+.   ++-.++|++||..+.......        
T Consensus        81 g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~--------  152 (260)
T d1zema1          81 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNM--------  152 (260)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTB--------
T ss_pred             CCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcch--------
Confidence             479999999865432111       1288999999999988876543   245699999998643322111        


Q ss_pred             CCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc---------cccccc----
Q 043792          167 DERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP---------YLKGAA----  230 (294)
Q Consensus       167 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~---------~~~~~~----  230 (294)
                                     ..|+.+|.+.+.+.+.++.+.   |+++.+|.||.|-.+.......         .....+    
T Consensus       153 ---------------~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (260)
T d1zema1         153 ---------------AAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVA  217 (260)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHH
T ss_pred             ---------------HHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHH
Confidence                           689999999999999988764   7999999999996553100000         000000    


Q ss_pred             ----cccCCCccccccHHHHHHHHHhhhcCc--CCCCeEEe
Q 043792          231 ----EMYEDGVMASVDLRFYVDAHICVFEDV--SSYGRYLC  265 (294)
Q Consensus       231 ----~~~~~~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~  265 (294)
                          ...+-++  +..++|+|.+++.++...  ..+|+.+.
T Consensus       218 ~~~~~~~Pl~R--~g~pedvA~~v~fL~S~~s~~itG~~i~  256 (260)
T d1zema1         218 QQMIGSVPMRR--YGDINEIPGVVAFLLGDDSSFMTGVNLP  256 (260)
T ss_dssp             HHHHHTSTTSS--CBCGGGSHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHhcCCCCC--CcCHHHHHHHHHHHhCchhcCccCCeEE
Confidence                0111122  677899999999998643  33566443

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.90  E-value=1.1e-22  Score=166.34  Aligned_cols=215  Identities=13%  Similarity=0.017  Sum_probs=154.4

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++|++|||||++.||+.+++.|+++|++|++.+|+.+..+.+.+++     ..+..++.+|++|+++++++++      
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   78 (253)
T d1hxha_           4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHDVSSEADWTLVMAAVQRRL   78 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCCeEEEEeecCCHHHHHHHHHHHHHHh
Confidence            46799999999999999999999999999999999877766666532     3478889999999988877765      


Q ss_pred             -cCCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                       .+|++||||+........      .++.+++|+.++..+.+++.+.  ++-.++|++||..+......     .     
T Consensus        79 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~~-----~-----  148 (253)
T d1hxha_          79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQ-----Y-----  148 (253)
T ss_dssp             CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTT-----B-----
T ss_pred             CCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCccc-----c-----
Confidence             479999999875432211      1388999999999888887654  22368999999864321111     1     


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHh-----cCCeEEEEecCceeCCCCCC--CCc----cccccccccCCCc
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD-----RGISMVSINGGLVMGPDVTI--SNP----YLKGAAEMYEDGV  237 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~ilrp~~i~G~~~~~--~~~----~~~~~~~~~~~~~  237 (294)
                                   ..|+.+|.+.+.+.+.++.+     +++++.+|.||.|..+....  ...    .........+-+ 
T Consensus       149 -------------~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~g-  214 (253)
T d1hxha_         149 -------------AGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAG-  214 (253)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTC-
T ss_pred             -------------ccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccC-
Confidence                         68999999999988877755     35999999999996543110  000    111111111112 


Q ss_pred             cccccHHHHHHHHHhhhcCcC--CCCeEEeecc
Q 043792          238 MASVDLRFYVDAHICVFEDVS--SYGRYLCFNH  268 (294)
Q Consensus       238 ~~~v~v~D~a~~i~~~~~~~~--~~~~~~~~~~  268 (294)
                       .+...+|+|++++.++....  .+|+.+..++
T Consensus       215 -r~~~pedvA~~v~fL~S~~s~~itG~~i~VDG  246 (253)
T d1hxha_         215 -RAYMPERIAQLVLFLASDESSVMSGSELHADN  246 (253)
T ss_dssp             -CEECHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             -CCCCHHHHHHHHHHHhChhhCCCcCcEEEECc
Confidence             27789999999999986433  4677554443

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.90  E-value=1.1e-22  Score=166.68  Aligned_cols=215  Identities=16%  Similarity=0.097  Sum_probs=153.5

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------cC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------GC   99 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~   99 (294)
                      |.+|||||++.||+.+++.|+++|++|++.+|++++.+.+.+++  ...+.++.++.+|++|+++++++++       ++
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i--~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEI--NQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGF   79 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--HHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH--HhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCc
Confidence            45699999999999999999999999999999987777766643  2345678899999999998887765       47


Q ss_pred             CEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHh----cCCCcEEEEecCcceeeeCCCCCCCCCCCCCCC
Q 043792          100 SGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQ----TNTVDKVVFTSSLTAVVWNNHRDNPTSHDFDER  169 (294)
Q Consensus       100 d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~  169 (294)
                      |++|||||........      .++.+++|+.++.++.+++.+    .+...++|++||.++......     .      
T Consensus        80 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~-----~------  148 (255)
T d1gega_          80 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPE-----L------  148 (255)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT-----B------
T ss_pred             cEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcc-----c------
Confidence            9999999875433211      138899999999999887643    233467999999763221111     1      


Q ss_pred             CCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-cc--cccc---------cccC
Q 043792          170 NWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YL--KGAA---------EMYE  234 (294)
Q Consensus       170 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~--~~~~---------~~~~  234 (294)
                                  ..|+.+|.+.+.+.+.++.+   +|+++.+|.||.+-.+....... ..  .+..         ...+
T Consensus       149 ------------~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  216 (255)
T d1gega_         149 ------------AVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRIT  216 (255)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCT
T ss_pred             ------------ccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCC
Confidence                        78999999999999998866   48999999999995443100000 00  0000         0111


Q ss_pred             CCccccccHHHHHHHHHhhhcCcC--CCCeEEeecc
Q 043792          235 DGVMASVDLRFYVDAHICVFEDVS--SYGRYLCFNH  268 (294)
Q Consensus       235 ~~~~~~v~v~D~a~~i~~~~~~~~--~~~~~~~~~~  268 (294)
                      -+  .+...+|+|.+++.++....  .+|+.+..++
T Consensus       217 l~--R~~~peevA~~v~fL~S~~a~~itG~~i~vDG  250 (255)
T d1gega_         217 LG--RLSEPEDVAACVSYLASPDSDYMTGQSLLIDG  250 (255)
T ss_dssp             TC--SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             CC--CCcCHHHHHHHHHHHhCchhCCccCcEEEecC
Confidence            12  27789999999999986433  3677554443

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.90  E-value=3e-22  Score=162.39  Aligned_cols=197  Identities=11%  Similarity=0.004  Sum_probs=148.9

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCe-------EEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYT-------VHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--   97 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~-------V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--   97 (294)
                      +.||||||++.||+++++.|+++|++       |...+|+.+..+.+..++  ...+.++.++.+|++|+++++++++  
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~--~~~g~~~~~~~~Dvt~~~~v~~~~~~~   79 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLEC--RAEGALTDTITADISDMADVRRLTTHI   79 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHH--HTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHH--HhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            35899999999999999999999987       888899887777766643  2345678899999999998887765  


Q ss_pred             -----cCCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCC
Q 043792           98 -----GCSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTS  163 (294)
Q Consensus        98 -----~~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~  163 (294)
                           ++|++||||+........      .++.+++|+.++..+.+++.+.   ++-.++|++||..+.......     
T Consensus        80 ~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~-----  154 (240)
T d2bd0a1          80 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHS-----  154 (240)
T ss_dssp             HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC-----
T ss_pred             HHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCC-----
Confidence                 479999999876543222      1388999999999988876543   244689999998643221111     


Q ss_pred             CCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccCCCcccc
Q 043792          164 HDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMAS  240 (294)
Q Consensus       164 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~  240 (294)
                                        ..|+.+|.+.+.+.+.++.+   +|+++.++.||.+-.+....   +    .   ......+
T Consensus       155 ------------------~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~---~----~---~~~~~~~  206 (240)
T d2bd0a1         155 ------------------SIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGK---V----D---DEMQALM  206 (240)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCC---C----C---STTGGGS
T ss_pred             ------------------hHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhh---c----C---HhhHhcC
Confidence                              78999999999999988766   48999999999996654211   1    0   1111226


Q ss_pred             ccHHHHHHHHHhhhcCcC
Q 043792          241 VDLRFYVDAHICVFEDVS  258 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~~  258 (294)
                      ...+|+|++++.++.++.
T Consensus       207 ~~PedvA~~v~~l~s~~~  224 (240)
T d2bd0a1         207 MMPEDIAAPVVQAYLQPS  224 (240)
T ss_dssp             BCHHHHHHHHHHHHTSCT
T ss_pred             CCHHHHHHHHHHHHcCCc
Confidence            678999999999987654

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=6.7e-22  Score=165.19  Aligned_cols=222  Identities=12%  Similarity=0.043  Sum_probs=157.2

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhc---cCCCCeEEEECCCCChhHHHHHhc--
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINY---NEEKKLKVFQADPFDYHSLVNALK--   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~---~~~~~v~~~~~Dl~~~~~~~~~~~--   97 (294)
                      ..++|++|||||++.||+.+++.|+++|++|++.+|+.++.+...+++...   ....++..+.+|++|+++++++++  
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            357899999999999999999999999999999999987766655543211   234578899999999998887765  


Q ss_pred             -----cCCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCC
Q 043792           98 -----GCSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTS  163 (294)
Q Consensus        98 -----~~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~  163 (294)
                           ++|++||||+........      .++.+++|+.++..+.+++.+.   ++-.++|++|+..  ..+...    .
T Consensus        89 ~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~--~~~~~~----~  162 (297)
T d1yxma1          89 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT--KAGFPL----A  162 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC--TTCCTT----C
T ss_pred             HHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccc--cccccc----c
Confidence                 579999999875533221      1388999999999998887644   2345788877643  111111    1


Q ss_pred             CCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc-----cccccccccCC
Q 043792          164 HDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP-----YLKGAAEMYED  235 (294)
Q Consensus       164 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~-----~~~~~~~~~~~  235 (294)
                                        ..|+.+|.+.+.+.+.++.+.   |+++.+|.||.|..+.......     ..+......+-
T Consensus       163 ------------------~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~pl  224 (297)
T d1yxma1         163 ------------------VHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPA  224 (297)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTT
T ss_pred             ------------------ccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCC
Confidence                              679999999999999988764   7999999999997664211110     11111111111


Q ss_pred             CccccccHHHHHHHHHhhhcCc--CCCCeEEeecccc
Q 043792          236 GVMASVDLRFYVDAHICVFEDV--SSYGRYLCFNHVI  270 (294)
Q Consensus       236 ~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~~~~  270 (294)
                      ++  +...+|+|.+++.++...  ..+|+.+..++..
T Consensus       225 gR--~g~pedvA~~v~fL~Sd~s~~iTG~~i~VDGG~  259 (297)
T d1yxma1         225 KR--IGVPEEVSSVVCFLLSPAASFITGQSVDVDGGR  259 (297)
T ss_dssp             SS--CBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CC--CcCHHHHHHHHHHHhCchhcCcCCcEEEeCcCh
Confidence            22  778899999999999543  3467655444333

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.89  E-value=6.2e-23  Score=166.90  Aligned_cols=218  Identities=11%  Similarity=0.001  Sum_probs=153.7

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEec-CCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------c
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALH-NHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------G   98 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~   98 (294)
                      +.||||||++.||+.+++.|+++|++|++.++ +.+..+.+.+++  ...+.++.++.+|++|+++++++++       +
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~--~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQI--EAYGGQAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH--HHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH--HHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            47999999999999999999999999998765 444455555532  2234578899999999998887765       4


Q ss_pred             CCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCCCC
Q 043792           99 CSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDER  169 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~  169 (294)
                      +|++||||+........      .++.+++|+.++.++.+++.+.   ++-.++|++||..+.......           
T Consensus        80 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~-----------  148 (244)
T d1edoa_          80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQ-----------  148 (244)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTC-----------
T ss_pred             CCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCC-----------
Confidence            79999999876543221      1388999999999988876543   244699999998643322111           


Q ss_pred             CCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc-cccccccccCCCccccccHHH
Q 043792          170 NWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP-YLKGAAEMYEDGVMASVDLRF  245 (294)
Q Consensus       170 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~v~v~D  245 (294)
                                  ..|+.+|.+.+.+.+.++.+.   |+++.+|.||.+-.+....... ..+......+-+  .+...+|
T Consensus       149 ------------~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~--R~~~p~d  214 (244)
T d1edoa_         149 ------------ANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLG--RTGQPEN  214 (244)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTC--SCBCHHH
T ss_pred             ------------HHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHHHHHHHhcCCCC--CCcCHHH
Confidence                        789999999999999988774   8999999999996443111000 000000111112  2778999


Q ss_pred             HHHHHHhhhcCc---CCCCeEEeeccccc
Q 043792          246 YVDAHICVFEDV---SSYGRYLCFNHVIN  271 (294)
Q Consensus       246 ~a~~i~~~~~~~---~~~~~~~~~~~~~s  271 (294)
                      +|++++.++..+   ..+|+.+..++.++
T Consensus       215 vA~~v~fLa~S~~a~~itG~~i~vdGG~s  243 (244)
T d1edoa_         215 VAGLVEFLALSPAASYITGQAFTIDGGIA  243 (244)
T ss_dssp             HHHHHHHHHHCSGGGGCCSCEEEESTTTT
T ss_pred             HHHHHHHHHCCchhcCCcCCeEEeCCCee
Confidence            999999986333   24677665555443

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.89  E-value=2.6e-22  Score=165.02  Aligned_cols=229  Identities=17%  Similarity=0.138  Sum_probs=156.3

Q ss_pred             CCCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           22 SSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        22 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      ++.++|++|||||++.||+.+++.|+++|++|++++|+.++...+.+++ ....+.++.++.+|++|+++++++++    
T Consensus         5 m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~-~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (260)
T d1h5qa_           5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKV-GKEFGVKTKAYQCDVSNTDIVTKTIQQIDA   83 (260)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHH-HHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-HHHhCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            3667899999999999999999999999999999999988876655533 12234578999999999998887775    


Q ss_pred             ---cCCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc----CCCcEEEEecCcceeeeCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT----NTVDKVVFTSSLTAVVWNNHRDNPTSH  164 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~  164 (294)
                         .+|++||||+........      .++.+++|+.++.++.+++.+.    +...+++..||..........      
T Consensus        84 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~------  157 (260)
T d1h5qa_          84 DLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS------  157 (260)
T ss_dssp             HSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE------
T ss_pred             HhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccc------
Confidence               479999999875433221      1378999999998888765432    244566666665321111000      


Q ss_pred             CCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-cccccccccCCCcccc
Q 043792          165 DFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-YLKGAAEMYEDGVMAS  240 (294)
Q Consensus       165 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~  240 (294)
                       +   ....      ....|+.+|.+.+.+.+.++.+   +|+++.+|.||.|-.+....... ..+......+-+  .+
T Consensus       158 -~---~~~~------~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~--R~  225 (260)
T d1h5qa_         158 -L---NGSL------TQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLN--RF  225 (260)
T ss_dssp             -T---TEEC------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTS--SC
T ss_pred             -c---ccCc------cccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHHHHHHHHhcCCCC--CC
Confidence             0   0000      0167999999999999988866   48999999999996554211110 000000111112  27


Q ss_pred             ccHHHHHHHHHhhhcCcC--CCCeEEeeccc
Q 043792          241 VDLRFYVDAHICVFEDVS--SYGRYLCFNHV  269 (294)
Q Consensus       241 v~v~D~a~~i~~~~~~~~--~~~~~~~~~~~  269 (294)
                      ...+|+|.+++.++....  .+|+.+..++.
T Consensus       226 g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  256 (260)
T d1h5qa_         226 AQPEEMTGQAILLLSDHATYMTGGEYFIDGG  256 (260)
T ss_dssp             BCGGGGHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred             cCHHHHHHHHHHHhcchhCCCcCceEEECCC
Confidence            789999999999985443  46775554443

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.1e-22  Score=166.51  Aligned_cols=213  Identities=18%  Similarity=0.098  Sum_probs=152.7

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------   97 (294)
                      .+|++|||||++.||+.+++.|+++|++|++++|+.++.+.+..++.......++.++.+|++|+++++++++       
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            4799999999999999999999999999999999987776665543222234578899999999998887775       


Q ss_pred             cCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhc------CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCC
Q 043792           98 GCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQT------NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNW  171 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~------~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~  171 (294)
                      ++|++||||+....  ...++.+++|+.++.++.+++.+.      +.-.++|++||..+.......             
T Consensus        82 ~iDilVnnAg~~~~--~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~-------------  146 (254)
T d2gdza1          82 RLDILVNNAGVNNE--KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQ-------------  146 (254)
T ss_dssp             CCCEEEECCCCCCS--SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTC-------------
T ss_pred             CcCeeccccccccc--ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCc-------------
Confidence            57999999998654  234588999999888777766543      112579999998643222111             


Q ss_pred             CChhhhhhccchhHhhHHHHHHHHHH--HHH---hcCCeEEEEecCceeCCCCCCCCcccccc----c----cccCC--C
Q 043792          172 SDVNLCKKFKLWHGLSKTLAEKTAWA--LAM---DRGISMVSINGGLVMGPDVTISNPYLKGA----A----EMYED--G  236 (294)
Q Consensus       172 ~~~~~~~~~~~~Y~~sK~~~e~~~~~--~~~---~~~~~~~ilrp~~i~G~~~~~~~~~~~~~----~----~~~~~--~  236 (294)
                                ..|+.+|.+.+.+.+.  ++.   .+|+++.+|.||.|-.+..   ..+....    .    ..+.+  .
T Consensus       147 ----------~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~---~~~~~~~~~~~~~~~~~~~~~~~p  213 (254)
T d2gdza1         147 ----------PVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAIL---ESIEKEENMGQYIEYKDHIKDMIK  213 (254)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHH---HGGGCHHHHGGGGGGHHHHHHHHH
T ss_pred             ----------cchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhh---hhccccccccccHHHHHHHHhcCC
Confidence                      6799999999988774  332   3589999999999954431   1011100    0    00000  0


Q ss_pred             ccccccHHHHHHHHHhhhcCcCCCCeEEe
Q 043792          237 VMASVDLRFYVDAHICVFEDVSSYGRYLC  265 (294)
Q Consensus       237 ~~~~v~v~D~a~~i~~~~~~~~~~~~~~~  265 (294)
                      ...+...+|+|++++.++.++..+|+.+.
T Consensus       214 ~~r~~~pedvA~~v~fL~s~~~itG~~i~  242 (254)
T d2gdza1         214 YYGILDPPLIANGLITLIEDDALNGAIMK  242 (254)
T ss_dssp             HHCCBCHHHHHHHHHHHHHCTTCSSCEEE
T ss_pred             CCCCcCHHHHHHHHHHHHcCCCCCCCEEE
Confidence            01267789999999999987777887543

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.89  E-value=3.8e-22  Score=164.98  Aligned_cols=223  Identities=13%  Similarity=0.082  Sum_probs=153.5

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhc-cCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINY-NEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      .++|++|||||++.||+.+++.|+++|++|++.+|+.++.+.+.+++... ....++..+.+|++|+++++++++     
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~   82 (272)
T d1xkqa_           3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   82 (272)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            45799999999999999999999999999999999987777766643222 123468999999999998887765     


Q ss_pred             --cCCEEEecCCCCCCCCc----c------hhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHST----Y------DELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDNPTS  163 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~~----~------~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~  163 (294)
                        ++|++|||||.......    .      .++.+++|+.++.++.+++.+.  ++-.++|+++|+.+-..+...    .
T Consensus        83 ~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~----~  158 (272)
T d1xkqa_          83 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPD----F  158 (272)
T ss_dssp             HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCS----S
T ss_pred             hCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCC----c
Confidence              57999999987543211    1      1367899999999998876554  112355555554211111111    1


Q ss_pred             CCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc---c-------ccccc
Q 043792          164 HDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP---Y-------LKGAA  230 (294)
Q Consensus       164 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~---~-------~~~~~  230 (294)
                                        ..|+.+|.+.+.+.+.++.+   +|+++.+|.||.|-.+.......   .       .....
T Consensus       159 ------------------~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~  220 (272)
T d1xkqa_         159 ------------------LYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHK  220 (272)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCT
T ss_pred             ------------------chhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHh
Confidence                              67999999999999998866   48999999999996553110000   0       00000


Q ss_pred             cccCCCccccccHHHHHHHHHhhhcCc---CCCCeEEeecccc
Q 043792          231 EMYEDGVMASVDLRFYVDAHICVFEDV---SSYGRYLCFNHVI  270 (294)
Q Consensus       231 ~~~~~~~~~~v~v~D~a~~i~~~~~~~---~~~~~~~~~~~~~  270 (294)
                      ...+-++  +...+|+|.+++.++..+   -.+|+.+..++..
T Consensus       221 ~~~PlgR--~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~  261 (272)
T d1xkqa_         221 ECIPIGA--AGKPEHIANIILFLADRNLSFYILGQSIVADGGT  261 (272)
T ss_dssp             TTCTTSS--CBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred             cCCCCCC--CcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCH
Confidence            1111122  778999999999998533   2577765554443

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.89  E-value=3.1e-22  Score=164.93  Aligned_cols=223  Identities=15%  Similarity=0.079  Sum_probs=152.0

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhc-cCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINY-NEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      .++|.+|||||++.||+.+++.|+++|++|++++|+.++.+.+.+++... ....++.++.+|++|+++++++++     
T Consensus         3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (264)
T d1spxa_           3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   82 (264)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            35799999999999999999999999999999999987777666643222 223468999999999998887775     


Q ss_pred             --cCCEEEecCCCCCCCC--------c--chhhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHS--------T--YDELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDNPTS  163 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~--------~--~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~  163 (294)
                        ++|++|||||......        .  ..+..+++|+.++.++.+++.+.  ++-.++|+++|+.+-..+...    .
T Consensus        83 ~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~~----~  158 (264)
T d1spxa_          83 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPD----F  158 (264)
T ss_dssp             HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTT----S
T ss_pred             hCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccCCC----c
Confidence              5799999988642110        1  12378999999999988887654  122466666665321212111    1


Q ss_pred             CCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc---cccccc-------
Q 043792          164 HDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP---YLKGAA-------  230 (294)
Q Consensus       164 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~---~~~~~~-------  230 (294)
                                        ..|+.+|.+.+.+.+.++.+   +|+++.+|.||.|-.+.......   ..+...       
T Consensus       159 ------------------~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  220 (264)
T d1spxa_         159 ------------------PYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMK  220 (264)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHH
T ss_pred             ------------------hhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHH
Confidence                              67999999999999998876   48999999999997654221110   000000       


Q ss_pred             cccCCCccccccHHHHHHHHHhhhcCc---CCCCeEEeecccc
Q 043792          231 EMYEDGVMASVDLRFYVDAHICVFEDV---SSYGRYLCFNHVI  270 (294)
Q Consensus       231 ~~~~~~~~~~v~v~D~a~~i~~~~~~~---~~~~~~~~~~~~~  270 (294)
                      ...+-++  +...+|+|++++.++..+   -.+|+.+..++..
T Consensus       221 ~~~Pl~R--~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~  261 (264)
T d1spxa_         221 ECVPAGV--MGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGS  261 (264)
T ss_dssp             HHCTTSS--CBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred             hcCCCCC--CcCHHHHHHHHHHHhCCcccCCccCceEEeCCCh
Confidence            0111222  778999999999998533   2577765554443

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.89  E-value=8.1e-22  Score=163.12  Aligned_cols=218  Identities=11%  Similarity=0.090  Sum_probs=153.3

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhc-cCCCCeEEEECCCCChhHHHHHhc------
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINY-NEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      ++|+++||||++.||+.+++.|+++|++|++.+|+.++.+.+.+++... ....++..+.+|++|+++++++++      
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF   82 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            5799999999999999999999999999999999887776666543222 123468999999999998887765      


Q ss_pred             -cCCEEEecCCCCCCC--Cc---c---hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDH--ST---Y---DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~--~~---~---~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                       .+|++|||||.....  ..   .   .++.+++|+.++..+.+++.+.   ++-.+++++||.+... +...    .  
T Consensus        83 G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~-~~~~----~--  155 (274)
T d1xhla_          83 GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQ-AHSG----Y--  155 (274)
T ss_dssp             SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSS-CCTT----S--
T ss_pred             CCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccc-cCCC----C--
Confidence             479999998864322  11   1   1378999999999988887654   2445777777754211 1111    1  


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc----------cccccccc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP----------YLKGAAEM  232 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~----------~~~~~~~~  232 (294)
                                      ..|+.+|.+.+.+.+.++.+   +|+++.+|.||.|..+.......          ..+.....
T Consensus       156 ----------------~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (274)
T d1xhla_         156 ----------------PYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKEC  219 (274)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTT
T ss_pred             ----------------ceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcC
Confidence                            67999999999999888866   48999999999996553111000          00000011


Q ss_pred             cCCCccccccHHHHHHHHHhhhcC---cCCCCeEEeec
Q 043792          233 YEDGVMASVDLRFYVDAHICVFED---VSSYGRYLCFN  267 (294)
Q Consensus       233 ~~~~~~~~v~v~D~a~~i~~~~~~---~~~~~~~~~~~  267 (294)
                      .+-++  +..++|+|.+++.++..   ...+|+.+..+
T Consensus       220 iPlgR--~g~pediA~~v~fL~S~d~s~~itG~~i~vD  255 (274)
T d1xhla_         220 IPVGH--CGKPEEIANIIVFLADRNLSSYIIGQSIVAD  255 (274)
T ss_dssp             CTTSS--CBCHHHHHHHHHHHHCHHHHTTCCSCEEEES
T ss_pred             CCCCC--CcCHHHHHHHHHHHcCCccccCccCcEEEeC
Confidence            11222  77899999999999853   23577755443

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.89  E-value=1.2e-21  Score=160.19  Aligned_cols=217  Identities=17%  Similarity=0.064  Sum_probs=153.5

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCC-ChhHHHHHhc----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPF-DYHSLVNALK----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~-~~~~~~~~~~----   97 (294)
                      ..++|+||||||++.||..+++.|+++|.+|+++.|+.+..+.+.+ ++......++.++.+|++ +.++++++++    
T Consensus         2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAE-LKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHH-HHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHH-HHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            4568999999999999999999999999999999998776655543 112344557889999998 5556666553    


Q ss_pred             ---cCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhc------CCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQT------NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~------~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                         ++|++|||||....  ..-++++++|+.++.++.+++.+.      +...++|++||..+.......          
T Consensus        81 ~~g~iDilvnnAG~~~~--~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~----------  148 (254)
T d1sbya1          81 QLKTVDILINGAGILDD--HQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQV----------  148 (254)
T ss_dssp             HHSCCCEEEECCCCCCT--TCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTS----------
T ss_pred             HcCCCCEEEeCCCCCCH--HHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCC----------
Confidence               57999999997653  333488999999999998876543      134679999998643221111          


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCcc--ccccc-cccCCCcccccc
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPY--LKGAA-EMYEDGVMASVD  242 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~--~~~~~-~~~~~~~~~~v~  242 (294)
                                   ..|+.+|.+...+.+.++.+   +++++.+|.||.|..+........  ..... ...  .......
T Consensus       149 -------------~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~--~~~~~~~  213 (254)
T d1sbya1         149 -------------PVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELL--LSHPTQT  213 (254)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHH--TTSCCEE
T ss_pred             -------------HHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhcc--ccCCCCC
Confidence                         78999999999999888866   489999999999986631111100  00000 000  0112456


Q ss_pred             HHHHHHHHHhhhcCcCCCCe-EEeecc
Q 043792          243 LRFYVDAHICVFEDVSSYGR-YLCFNH  268 (294)
Q Consensus       243 v~D~a~~i~~~~~~~~~~~~-~~~~~~  268 (294)
                      .+++|++++.+++... +|+ +.+.++
T Consensus       214 ~e~va~~~~~~~~~~~-tG~vi~vdgG  239 (254)
T d1sbya1         214 SEQCGQNFVKAIEANK-NGAIWKLDLG  239 (254)
T ss_dssp             HHHHHHHHHHHHHHCC-TTCEEEEETT
T ss_pred             HHHHHHHHHHhhhCCC-CCCEEEECCC
Confidence            8999999998887654 565 555554

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=7.3e-22  Score=161.79  Aligned_cols=210  Identities=15%  Similarity=0.116  Sum_probs=150.5

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ..++|++|||||++.||+++++.|+++|++|++.+|+.++.+.+.+++.......++.++.+|++++++++++++     
T Consensus         7 ~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~   86 (257)
T d1xg5a_           7 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ   86 (257)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence            467899999999999999999999999999999999988777776654333334578889999999998887764     


Q ss_pred             --cCCEEEecCCCCCCCCc----c--hhhhHhHhhHHHHHHHHHHHh----cC-CCcEEEEecCcceeeeCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHST----Y--DELTAEVETMAAHNVLEACAQ----TN-TVDKVVFTSSLTAVVWNNHRDNPTSH  164 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~~----~--~~~~~~~n~~~~~~ll~~~~~----~~-~~~~~v~~Ss~~~~~~~~~~~~~~~~  164 (294)
                        ++|++||||+.......    .  .+..+++|+.+..++.+++.+    .+ .-.++|++||.++.......      
T Consensus        87 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~------  160 (257)
T d1xg5a_          87 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLS------  160 (257)
T ss_dssp             HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCG------
T ss_pred             cCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCc------
Confidence              57999999987543221    1  138899999999888777643    21 23689999997632111000      


Q ss_pred             CCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh-----cCCeEEEEecCceeCCCCCCCCccccccc----cccCC
Q 043792          165 DFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD-----RGISMVSINGGLVMGPDVTISNPYLKGAA----EMYED  235 (294)
Q Consensus       165 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~ilrp~~i~G~~~~~~~~~~~~~~----~~~~~  235 (294)
                               ..      ..|+.+|.+.+.+.+.++.+     +++++.++.||.+-.+.   .........    ...+.
T Consensus       161 ---------~~------~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~---~~~~~~~~~~~~~~~~~~  222 (257)
T d1xg5a_         161 ---------VT------HFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQF---AFKLHDKDPEKAAATYEQ  222 (257)
T ss_dssp             ---------GG------HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSH---HHHHTTTCHHHHHHHHC-
T ss_pred             ---------cc------HHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChh---hhhcChhhHHHHHhcCCC
Confidence                     00      56999999999999888754     57999999999874332   110111111    11112


Q ss_pred             CccccccHHHHHHHHHhhhcCcC
Q 043792          236 GVMASVDLRFYVDAHICVFEDVS  258 (294)
Q Consensus       236 ~~~~~v~v~D~a~~i~~~~~~~~  258 (294)
                        ..+...+|+|++++.++..+.
T Consensus       223 --~r~~~pedvA~~v~fL~s~~a  243 (257)
T d1xg5a_         223 --MKCLKPEDVAEAVIYVLSTPA  243 (257)
T ss_dssp             ----CBCHHHHHHHHHHHHHSCT
T ss_pred             --CCCcCHHHHHHHHHHHhCChh
Confidence              227889999999999987653

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.88  E-value=6.3e-22  Score=162.47  Aligned_cols=221  Identities=13%  Similarity=0.051  Sum_probs=151.2

Q ss_pred             CCCCCeEEEeCCCc--hHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc---
Q 043792           23 SNATKTVCVMDASG--HFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK---   97 (294)
Q Consensus        23 ~~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---   97 (294)
                      ..++|++|||||+|  .||+.+++.|+++|++|++.+|+.+..+...+   ......+..++.+|++|+++++++++   
T Consensus         5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~---~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (256)
T d1ulua_           5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEK---LAEALGGALLFRADVTQDEELDALFAGVK   81 (256)
T ss_dssp             CCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH---HHHHTTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHH---hhhccCcccccccccCCHHHHHHHHHHHH
Confidence            35689999999988  79999999999999999988887654444333   22334467889999999998887765   


Q ss_pred             ----cCCEEEecCCCCCCC--------Cc--chhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCC
Q 043792           98 ----GCSGLFYSFEPPSDH--------ST--YDELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPT  162 (294)
Q Consensus        98 ----~~d~Vih~a~~~~~~--------~~--~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~  162 (294)
                          ++|++||+|+.....        ..  .....+++|+.++..+.+++... ..-.++|++||..+.......    
T Consensus        82 ~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~~~----  157 (256)
T d1ulua_          82 EAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKY----  157 (256)
T ss_dssp             HHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTC----
T ss_pred             HhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCCCc----
Confidence                479999999864311        11  11267899999999999887655 122579999997642211111    


Q ss_pred             CCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc---cccccccccCCC
Q 043792          163 SHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP---YLKGAAEMYEDG  236 (294)
Q Consensus       163 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~---~~~~~~~~~~~~  236 (294)
                                         ..|+.+|.+.+.+.+.++.+   +|+++.++.||.+..+.......   ..+......+-+
T Consensus       158 -------------------~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~  218 (256)
T d1ulua_         158 -------------------NVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLR  218 (256)
T ss_dssp             -------------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTS
T ss_pred             -------------------hHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCC
Confidence                               78999999999999998876   48999999999997665322110   000000111122


Q ss_pred             ccccccHHHHHHHHHhhhcCcC--CCCeEEeeccccc
Q 043792          237 VMASVDLRFYVDAHICVFEDVS--SYGRYLCFNHVIN  271 (294)
Q Consensus       237 ~~~~v~v~D~a~~i~~~~~~~~--~~~~~~~~~~~~s  271 (294)
                      +  +...+|+|.+++.++....  .+|+.+..++.++
T Consensus       219 R--~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~  253 (256)
T d1ulua_         219 R--NITQEEVGNLGLFLLSPLASGITGEVVYVDAGYH  253 (256)
T ss_dssp             S--CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             C--CcCHHHHHHHHHHHhCchhCCccCCeEEECcCEe
Confidence            2  7789999999999996543  4677665554443

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.88  E-value=1.3e-21  Score=162.11  Aligned_cols=217  Identities=13%  Similarity=0.093  Sum_probs=152.8

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++|++|||||++.||+.+++.|+++|++|++++|+.++.+.+..++     ..++..+.+|++++++++++++      
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   77 (276)
T d1bdba_           3 LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH-----GDNVLGIVGDVRSLEDQKQAASRCVARF   77 (276)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCCeeEEecccccHHHHHHHHHHHHHHh
Confidence            46799999999999999999999999999999999876665555432     3478999999999988877764      


Q ss_pred             -cCCEEEecCCCCCCCCc-------c----hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHST-------Y----DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPT  162 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~-------~----~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~  162 (294)
                       .+|++||||+.......       .    .++.+++|+.++.++.+++.+.   ++ .++|++||..+.. +...    
T Consensus        78 g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~-~~~~----  151 (276)
T d1bdba_          78 GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFY-PNGG----  151 (276)
T ss_dssp             SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTS-TTSS----
T ss_pred             CCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhcc-CCCC----
Confidence             57999999986432211       0    2377999999999888876543   13 5788888875322 1111    


Q ss_pred             CCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc--CCeEEEEecCceeCCCCCCCCc-----cccccc-----
Q 043792          163 SHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR--GISMVSINGGLVMGPDVTISNP-----YLKGAA-----  230 (294)
Q Consensus       163 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ilrp~~i~G~~~~~~~~-----~~~~~~-----  230 (294)
                      .                  ..|+.+|.+.+.+.+.++.+.  ++++.+|.||.|-.+.......     ......     
T Consensus       152 ~------------------~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~  213 (276)
T d1bdba_         152 G------------------PLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADML  213 (276)
T ss_dssp             C------------------HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHH
T ss_pred             C------------------chHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHH
Confidence            1                  679999999999999888764  4999999999997654211110     000000     


Q ss_pred             -cccCCCccccccHHHHHHHHHhhhcC---cCCCCeEEeeccccc
Q 043792          231 -EMYEDGVMASVDLRFYVDAHICVFED---VSSYGRYLCFNHVIN  271 (294)
Q Consensus       231 -~~~~~~~~~~v~v~D~a~~i~~~~~~---~~~~~~~~~~~~~~s  271 (294)
                       ...+-++  +..++|+|.+++.++..   ...+|+.+..++.++
T Consensus       214 ~~~~PlgR--~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG~~  256 (276)
T d1bdba_         214 KSVLPIGR--MPEVEEYTGAYVFFATRGDAAPATGALLNYDGGLG  256 (276)
T ss_dssp             TTTCTTSS--CCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSSGG
T ss_pred             HhcCCCCC--CcCHHHHHHHHHHHcCCcccCCeeCcEEEECcChh
Confidence             0111111  67789999999888742   235777655554444

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.88  E-value=4.6e-22  Score=161.45  Aligned_cols=217  Identities=15%  Similarity=0.070  Sum_probs=153.3

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++|++|||||++.||+.+++.|+++|++|++.+|+.++.+.+..     ..+.++.++++|++++++++++++      
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~   77 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVA-----ALEAEAIAVVADVSDPKAVEAVFAEALEEF   77 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----TCCSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            467999999999999999999999999999999998766555444     234578899999999998887765      


Q ss_pred             -cCCEEEecCCCCCCCCcc----h--hhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHSTY----D--ELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDER  169 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~~----~--~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~  169 (294)
                       ++|++||||+........    +  ++.+++|+.+...+.+++.+. .+-+.++++||.+ ......            
T Consensus        78 g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a-~~~~~~------------  144 (241)
T d2a4ka1          78 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVA-GLGAFG------------  144 (241)
T ss_dssp             SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCT-TCCHHH------------
T ss_pred             CCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccc-cccccC------------
Confidence             479999998765433211    1  288999999999999987766 2334555555543 111100            


Q ss_pred             CCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc-cccccccccCCCccccccHHH
Q 043792          170 NWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP-YLKGAAEMYEDGVMASVDLRF  245 (294)
Q Consensus       170 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~v~v~D  245 (294)
                                 ...|+.+|.+.+.+.+.++.+.   |+++.+|.||.+-.+....... ..+......+-+  .+..++|
T Consensus       145 -----------~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~p~~--r~~~p~d  211 (241)
T d2a4ka1         145 -----------LAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLG--RAGRPEE  211 (241)
T ss_dssp             -----------HHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTC--SCBCHHH
T ss_pred             -----------ccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHhHHHHHHhCCCCC--CCcCHHH
Confidence                       1679999999999999998875   6999999999995543211110 000000111112  2778999


Q ss_pred             HHHHHHhhhcCcC--CCCeEEeeccccc
Q 043792          246 YVDAHICVFEDVS--SYGRYLCFNHVIN  271 (294)
Q Consensus       246 ~a~~i~~~~~~~~--~~~~~~~~~~~~s  271 (294)
                      +|++++.++....  .+|+.+..++.+|
T Consensus       212 va~~v~fL~S~~s~~itG~~i~vDGG~s  239 (241)
T d2a4ka1         212 VAQAALFLLSEESAYITGQALYVDGGRS  239 (241)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHhcchhCCCcCceEEeCCCcc
Confidence            9999999996543  4677655554443

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=9.7e-22  Score=159.93  Aligned_cols=219  Identities=13%  Similarity=0.037  Sum_probs=156.2

Q ss_pred             CCCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc---c
Q 043792           22 SSNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK---G   98 (294)
Q Consensus        22 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---~   98 (294)
                      ...++|++|||||++.||+.+++.|+++|++|++++|++++.+.+.+       ..+++...+|+.+.+.++...+   +
T Consensus         2 ~~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~~~~   74 (245)
T d2ag5a1           2 GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK-------YPGIQTRVLDVTKKKQIDQFANEVER   74 (245)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG-------STTEEEEECCTTCHHHHHHHHHHCSC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-------ccCCceeeeecccccccccccccccc
Confidence            34678999999999999999999999999999999998755544433       3468888999988876666554   6


Q ss_pred             CCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCCCC
Q 043792           99 CSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDER  169 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~  169 (294)
                      +|++||+++........      .+..+++|+.++..+.+++.+.   ++-.++|++||..+...+...    .      
T Consensus        75 id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~----~------  144 (245)
T d2ag5a1          75 LDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVN----R------  144 (245)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTT----B------
T ss_pred             ceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccc----h------
Confidence            79999999876653221      1388999999999998877643   244689999986432211111    1      


Q ss_pred             CCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc-------cccccccccCCCccc
Q 043792          170 NWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP-------YLKGAAEMYEDGVMA  239 (294)
Q Consensus       170 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~-------~~~~~~~~~~~~~~~  239 (294)
                                  ..|+.+|.+.+.+.+.++.+   +|+++.+|.||.|-.+.......       ..+......+-+  .
T Consensus       145 ------------~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~--R  210 (245)
T d2ag5a1         145 ------------CVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTG--R  210 (245)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTS--S
T ss_pred             ------------hHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCC--C
Confidence                        78999999999999999877   48999999999997654211000       000000111111  2


Q ss_pred             cccHHHHHHHHHhhhcCc--CCCCeEEeeccccc
Q 043792          240 SVDLRFYVDAHICVFEDV--SSYGRYLCFNHVIN  271 (294)
Q Consensus       240 ~v~v~D~a~~i~~~~~~~--~~~~~~~~~~~~~s  271 (294)
                      +...+|+|+++..++...  ..+|+.+..++.+|
T Consensus       211 ~~~pedva~~v~fL~s~~s~~iTG~~i~VDGG~s  244 (245)
T d2ag5a1         211 FATAEEIAMLCVYLASDESAYVTGNPVIIDGGWS  244 (245)
T ss_dssp             CEEHHHHHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred             CcCHHHHHHHHHHHhChhhCCCcCceEEeCCCcC
Confidence            778999999999999654  34777666655544

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.87  E-value=3e-21  Score=156.01  Aligned_cols=209  Identities=11%  Similarity=0.061  Sum_probs=146.7

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCCh-hHHHHHhccCCEEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDY-HSLVNALKGCSGLF  103 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~-~~~~~~~~~~d~Vi  103 (294)
                      ++|++|||||++.||+.+++.|+++|++|++.+|+.+   .+.+   .     ..+++.+|+++. +.+.+.+.++|++|
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~---~l~~---~-----~~~~~~~Dv~~~~~~~~~~~g~iD~lV   71 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEE---LLKR---S-----GHRYVVCDLRKDLDLLFEKVKEVDILV   71 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH---HHHH---T-----CSEEEECCTTTCHHHHHHHSCCCSEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHH---HHHh---c-----CCcEEEcchHHHHHHHHHHhCCCcEEE
Confidence            5799999999999999999999999999999999753   2333   2     557888999864 44555566899999


Q ss_pred             ecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCCh
Q 043792          104 YSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDV  174 (294)
Q Consensus       104 h~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~  174 (294)
                      |||+........      .++.+++|+.++..+.+++.+.   ++..++|++||..+.......                
T Consensus        72 nnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~----------------  135 (234)
T d1o5ia_          72 LNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENL----------------  135 (234)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTB----------------
T ss_pred             ecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccccccccccccccccccccc----------------
Confidence            999875443221      1277899999988888876533   245689999997532211111                


Q ss_pred             hhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccc--cccCC-CccccccHHHHHH
Q 043792          175 NLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAA--EMYED-GVMASVDLRFYVD  248 (294)
Q Consensus       175 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~--~~~~~-~~~~~v~v~D~a~  248 (294)
                             ..|+.+|.+.+.+.+.++.+   +|+++.+|.||.+..+..   ........  ..... ....+...+|+|.
T Consensus       136 -------~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~---~~~~~~~~~~~~~~~~pl~R~~~pediA~  205 (234)
T d1o5ia_         136 -------YTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERV---KELLSEEKKKQVESQIPMRRMAKPEEIAS  205 (234)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTH---HHHSCHHHHHHHHTTSTTSSCBCHHHHHH
T ss_pred             -------ccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhh---hhhcCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence                   67999999999999888866   489999999999966542   11111110  01111 1112788999999


Q ss_pred             HHHhhhcCc--CCCCeEEeecccc
Q 043792          249 AHICVFEDV--SSYGRYLCFNHVI  270 (294)
Q Consensus       249 ~i~~~~~~~--~~~~~~~~~~~~~  270 (294)
                      +++.++...  ..+|+.+..++.+
T Consensus       206 ~v~fL~S~~s~~itG~~i~vDGG~  229 (234)
T d1o5ia_         206 VVAFLCSEKASYLTGQTIVVDGGL  229 (234)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHhChhhcCCcCcEEEECccc
Confidence            999998643  3467766555443

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.87  E-value=6.7e-21  Score=159.47  Aligned_cols=219  Identities=12%  Similarity=0.033  Sum_probs=150.9

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      +.++|++|||||+|.||+++++.|+++|++|++++|+.++.+.+.+++. ...+.++.++.+|+++.++++++++     
T Consensus        22 ~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~-~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~  100 (294)
T d1w6ua_          22 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQIS-SQTGNKVHAIQCDVRDPDMVQNTVSELIKV  100 (294)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH-HHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHH-HhcCCceEEEEecccChHHHHHHhhhhhhh
Confidence            5678999999999999999999999999999999999877665554331 1234578899999999998877664     


Q ss_pred             --cCCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc----CCCcEEEEecCcceeeeCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT----NTVDKVVFTSSLTAVVWNNHRDNPTSHD  165 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~  165 (294)
                        ++|++||+|+........      ....+.+|......+...+...    .....++.+||..+.......       
T Consensus       101 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~-------  173 (294)
T d1w6ua_         101 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFV-------  173 (294)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTC-------
T ss_pred             ccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhccccc-------
Confidence              579999999875543221      1266778887777665543322    244567777776532222111       


Q ss_pred             CCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc----cccccccccCCCcc
Q 043792          166 FDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP----YLKGAAEMYEDGVM  238 (294)
Q Consensus       166 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~----~~~~~~~~~~~~~~  238 (294)
                                      ..|+.+|.+.+.+.+.++.+   +|+++.+|.||.|..+.......    ..+......+-++ 
T Consensus       174 ----------------~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R-  236 (294)
T d1w6ua_         174 ----------------VPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGR-  236 (294)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSS-
T ss_pred             ----------------chHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCC-
Confidence                            67999999999999998866   48999999999997665221110    0000001112222 


Q ss_pred             ccccHHHHHHHHHhhhcCcC--CCCeEEeec
Q 043792          239 ASVDLRFYVDAHICVFEDVS--SYGRYLCFN  267 (294)
Q Consensus       239 ~~v~v~D~a~~i~~~~~~~~--~~~~~~~~~  267 (294)
                       +...+|+|.+++.++....  .+|+.+..+
T Consensus       237 -~~~pediA~~v~fL~sd~s~~itG~~i~vD  266 (294)
T d1w6ua_         237 -LGTVEELANLAAFLCSDYASWINGAVIKFD  266 (294)
T ss_dssp             -CBCHHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred             -CCCHHHHHHHHHHHhCchhcCCCCcEEEEC
Confidence             7789999999999996543  477755443

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.87  E-value=1.7e-20  Score=155.13  Aligned_cols=220  Identities=12%  Similarity=-0.008  Sum_probs=154.6

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC-hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK-LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      +.++|++|||||++.||+.+++.|+++|++|++++|+.++ .+.+.++  +.....++.++.+|++|++++.++++    
T Consensus        15 sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~--~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~   92 (272)
T d1g0oa_          15 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAA--IKKNGSDAACVKANVGVVEDIVRMFEEAVK   92 (272)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH--HHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHH--HHhhCCceeeEeCCCCCHHHHHHHHHHHHH
Confidence            5678999999999999999999999999999999887543 3444443  22345678999999999998887765    


Q ss_pred             ---cCCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                         .+|++||+++........      .++.+++|+.++..+.+++... ..-.++++++|+.+.......    .    
T Consensus        93 ~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~~~----~----  164 (272)
T d1g0oa_          93 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPK----H----  164 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSS----C----
T ss_pred             HhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccccccc----h----
Confidence               479999998875543222      1288999999999999998765 223577888776422211111    1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCC--Cccccccc------------
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTIS--NPYLKGAA------------  230 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~--~~~~~~~~------------  230 (294)
                                    ..|+.+|.+.+.+.+.++.+   +|+++.+|.||.+-.+.....  ........            
T Consensus       165 --------------~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (272)
T d1g0oa_         165 --------------AVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAV  230 (272)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHH
T ss_pred             --------------hhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHH
Confidence                          67999999999999988876   489999999999965431000  00000000            


Q ss_pred             cccCCCccccccHHHHHHHHHhhhcCcC--CCCeEEeecc
Q 043792          231 EMYEDGVMASVDLRFYVDAHICVFEDVS--SYGRYLCFNH  268 (294)
Q Consensus       231 ~~~~~~~~~~v~v~D~a~~i~~~~~~~~--~~~~~~~~~~  268 (294)
                      ...+-+  .+...+|+|.+++.++....  .+|+.+..++
T Consensus       231 ~~~Plg--R~~~peevA~~v~fL~s~~s~~itG~~i~vDG  268 (272)
T d1g0oa_         231 QWSPLR--RVGLPIDIARVVCFLASNDGGWVTGKVIGIDG  268 (272)
T ss_dssp             HSCTTC--SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             ccCCCC--CCcCHHHHHHHHHHHhCchhcCccCceEeECC
Confidence            011112  27889999999999996543  4677554443

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.86  E-value=5.3e-20  Score=150.10  Aligned_cols=170  Identities=15%  Similarity=0.160  Sum_probs=128.6

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHH---CCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           26 TKTVCVMDASGHFASALVRRLLL---RGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      ||+||||||++.||+.+++.|++   +|++|++.+|+.++.+.+.+   ......++.++.+|++|+++++++++     
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~   78 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED---LAKNHSNIHILEIDLRNFDAYDKLVADIEGV   78 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH---HHHHCTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH---HHhcCCcEEEEEEEeccHHHHHHHHhhhHHH
Confidence            68999999999999999999974   69999999999988877765   33345689999999999988776643     


Q ss_pred             ----cCCEEEecCCCCCCCCcc-------hhhhHhHhhHHHHHHHHHHHhc--------------CCCcEEEEecCccee
Q 043792           98 ----GCSGLFYSFEPPSDHSTY-------DELTAEVETMAAHNVLEACAQT--------------NTVDKVVFTSSLTAV  152 (294)
Q Consensus        98 ----~~d~Vih~a~~~~~~~~~-------~~~~~~~n~~~~~~ll~~~~~~--------------~~~~~~v~~Ss~~~~  152 (294)
                          .+|++||||+........       .++.+++|+.++..+.+++...              .+..++|++||..+.
T Consensus        79 ~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~  158 (248)
T d1snya_          79 TKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS  158 (248)
T ss_dssp             HGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC
T ss_pred             hhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccc
Confidence                379999999875433211       1278999999999888875422              134689999997532


Q ss_pred             eeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCC
Q 043792          153 VWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPD  218 (294)
Q Consensus       153 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~  218 (294)
                      ..+...  + .           .      ..|+.||.+...+.+.++.+   .|+++.++.||.|-.+.
T Consensus       159 ~~~~~~--~-~-----------~------~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m  207 (248)
T d1snya_         159 IQGNTD--G-G-----------M------YAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDM  207 (248)
T ss_dssp             STTCCS--C-C-----------C------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTT
T ss_pred             cCCCCC--C-C-----------h------HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCc
Confidence            211111  0 0           0      57999999999998888765   47999999999995443

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.86  E-value=1.8e-21  Score=159.12  Aligned_cols=211  Identities=13%  Similarity=0.002  Sum_probs=147.0

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-------cCC
Q 043792           28 TVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-------GCS  100 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~d  100 (294)
                      ++|||||++.||+.+++.|+++|++|.+.+|+.+..+.+..   .     ...+..+|++|.++++++++       ++|
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~---~-----~~~~~~~dv~~~~~~~~~~~~~~~~~G~iD   73 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA---F-----AETYPQLKPMSEQEPAELIEAVTSAYGQVD   73 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH---H-----HHHCTTSEECCCCSHHHHHHHHHHHHSCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh---h-----hCcEEEeccCCHHHHHHHHHHHHHHcCCCC
Confidence            68999999999999999999999999999998877766655   2     12234567777766666553       579


Q ss_pred             EEEecCCCCCCCCc----c---hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCC
Q 043792          101 GLFYSFEPPSDHST----Y---DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERN  170 (294)
Q Consensus       101 ~Vih~a~~~~~~~~----~---~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~  170 (294)
                      ++||||+.......    .   .++.+++|+.++.++.+++.+.   ++-.++|++||.++.......            
T Consensus        74 iLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~------------  141 (252)
T d1zmta1          74 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKEL------------  141 (252)
T ss_dssp             EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTC------------
T ss_pred             EEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccc------------
Confidence            99999886432211    1   1278899999999888876543   244689999998632211111            


Q ss_pred             CCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc--cccccc-------cccCCCcc
Q 043792          171 WSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP--YLKGAA-------EMYEDGVM  238 (294)
Q Consensus       171 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~--~~~~~~-------~~~~~~~~  238 (294)
                                 ..|+.+|.+.+.+.+.++.+.   |+++.+|.||.|..+.......  ..+..+       ...+-+  
T Consensus       142 -----------~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~--  208 (252)
T d1zmta1         142 -----------STYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQ--  208 (252)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSS--
T ss_pred             -----------cccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCC--
Confidence                       679999999999999988764   7999999999997665322110  000000       111112  


Q ss_pred             ccccHHHHHHHHHhhhcCcC--CCCeEEeeccccc
Q 043792          239 ASVDLRFYVDAHICVFEDVS--SYGRYLCFNHVIN  271 (294)
Q Consensus       239 ~~v~v~D~a~~i~~~~~~~~--~~~~~~~~~~~~s  271 (294)
                      .+...+|+|.++++++....  .+|+.+..++.++
T Consensus       209 R~g~pedvA~~v~fL~S~~s~~iTG~~i~vdGG~~  243 (252)
T d1zmta1         209 RLGTQKELGELVAFLASGSCDYLTGQVFWLAGGFP  243 (252)
T ss_dssp             SCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred             CCcCHHHHHHHHHHHhCchhcCCcCCeEEECCCce
Confidence            27789999999999996543  4677665554443

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.86  E-value=1.5e-20  Score=154.34  Aligned_cols=217  Identities=17%  Similarity=0.049  Sum_probs=151.5

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC-hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK-LQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      +..+|+||||||++.||+++++.|+++|++|++..++.++ .+.+.++  +...+.++.++.+|++|+++++++++    
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~--~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~   80 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAE--LKKLGAQGVAIQADISKPSEVVALFDKAVS   80 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH--HHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHH--HHHcCCCceEecCCCCCHHHHHHHHHHHHH
Confidence            4568999999999999999999999999999987765443 4444443  23345678999999999998888775    


Q ss_pred             ---cCCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                         .+|++||+|+........      .++.+++|+.+..++++++.+. ..-+++++++|..+...+...    .    
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~~----~----  152 (259)
T d1ja9a_          81 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPN----H----  152 (259)
T ss_dssp             HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCS----C----
T ss_pred             HcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCCC----c----
Confidence               479999999875543221      1388999999999999988765 122466666665432222211    1    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCC-----CCccccccc---------
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTI-----SNPYLKGAA---------  230 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~-----~~~~~~~~~---------  230 (294)
                                    ..|+.+|.+.+.+.+.++.+   +|+++.+|.||.+-.+....     ......+..         
T Consensus       153 --------------~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (259)
T d1ja9a_         153 --------------ALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLA  218 (259)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHH
T ss_pred             --------------hhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHH
Confidence                          67999999999999988876   48999999999996432100     000000000         


Q ss_pred             cccCCCccccccHHHHHHHHHhhhcCcC--CCCeEEe
Q 043792          231 EMYEDGVMASVDLRFYVDAHICVFEDVS--SYGRYLC  265 (294)
Q Consensus       231 ~~~~~~~~~~v~v~D~a~~i~~~~~~~~--~~~~~~~  265 (294)
                      ...+-+  .+...+|+|++++.++....  .+|+.+.
T Consensus       219 ~~~pl~--R~g~p~eVa~~v~fL~S~~a~~itG~~i~  253 (259)
T d1ja9a_         219 NMNPLK--RIGYPADIGRAVSALCQEESEWINGQVIK  253 (259)
T ss_dssp             HTSTTS--SCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             hCCCCC--CCcCHHHHHHHHHHHhCchhcCCcCceEE
Confidence            111111  27889999999999997654  4676543

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.86  E-value=4.1e-20  Score=151.85  Aligned_cols=204  Identities=15%  Similarity=0.103  Sum_probs=147.2

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCe-EEEEecCC---CChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhcc-
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYT-VHAALHNH---GKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKG-   98 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~---~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-   98 (294)
                      .+..+||||||+|.||..+++.|+++|++ |+++.|+.   +..+.+..+  +...+.++.++.+|++|.+++.++++. 
T Consensus         7 ~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~--l~~~g~~v~~~~~Dv~d~~~~~~~~~~i   84 (259)
T d2fr1a1           7 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAE--LEALGARTTVAACDVTDRESVRELLGGI   84 (259)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHH--HHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             CCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHH--HHhccccccccccccchHHHHHHhhccc
Confidence            34579999999999999999999999984 77778863   233333332  223456799999999999999888753 


Q ss_pred             -----CCEEEecCCCCCCCCcch------hhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           99 -----CSGLFYSFEPPSDHSTYD------ELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        99 -----~d~Vih~a~~~~~~~~~~------~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                           +|.|||+++........+      ...+++|+.++.++.+++... +..++|++||..+..... .    .    
T Consensus        85 ~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~-~~~~iv~~SS~a~~~g~~-~----~----  154 (259)
T d2fr1a1          85 GDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-DLTAFVLFSSFASAFGAP-G----L----  154 (259)
T ss_dssp             CTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-CCSEEEEEEEHHHHTCCT-T----C----
T ss_pred             cccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhcc-CCceEeeecchhhccCCc-c----c----
Confidence                 689999998766543322      267889999999999988877 678999999987543222 2    2    


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhcCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccHHHHH
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYV  247 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a  247 (294)
                                    ..|+.+|...+.+.+.+.. .|+++++|.||.+.+++..... . .   ..+.......+..++++
T Consensus       155 --------------~~YaAaka~l~~la~~~~~-~Gi~v~~I~pg~~~~~g~~~~~-~-~---~~~~~~G~~~~~~~~~~  214 (259)
T d2fr1a1         155 --------------GGYAPGNAYLDGLAQQRRS-DGLPATAVAWGTWAGSGMAEGP-V-A---DRFRRHGVIEMPPETAC  214 (259)
T ss_dssp             --------------TTTHHHHHHHHHHHHHHHH-TTCCCEEEEECCBC-----------------CTTTTEECBCHHHHH
T ss_pred             --------------HHHHHHHHhHHHHHHHHHh-CCCCEEECCCCcccCCccccch-H-H---HHHHhcCCCCCCHHHHH
Confidence                          6799999999998887764 5999999999998766521111 1 1   11112223367899999


Q ss_pred             HHHHhhhcCcCC
Q 043792          248 DAHICVFEDVSS  259 (294)
Q Consensus       248 ~~i~~~~~~~~~  259 (294)
                      +++..++.+...
T Consensus       215 ~~l~~~l~~~~~  226 (259)
T d2fr1a1         215 RALQNALDRAEV  226 (259)
T ss_dssp             HHHHHHHHTTCS
T ss_pred             HHHHHHHhCCCc
Confidence            999999987644

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.85  E-value=8.1e-21  Score=156.00  Aligned_cols=212  Identities=16%  Similarity=0.059  Sum_probs=152.7

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHH---CCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLL---RGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--   97 (294)
                      ...+|.++||||++.||+.+++.|++   +|++|++++|+.++.+.+.+++.....+.++.++.+|++|+++++++++  
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            35678999999999999999999986   7999999999988877776654333345578899999999998887763  


Q ss_pred             ---------cCCEEEecCCCCCCCC-------c--chhhhHhHhhHHHHHHHHHHHhc---CC--CcEEEEecCcceeee
Q 043792           98 ---------GCSGLFYSFEPPSDHS-------T--YDELTAEVETMAAHNVLEACAQT---NT--VDKVVFTSSLTAVVW  154 (294)
Q Consensus        98 ---------~~d~Vih~a~~~~~~~-------~--~~~~~~~~n~~~~~~ll~~~~~~---~~--~~~~v~~Ss~~~~~~  154 (294)
                               ..|++||+|+......       .  ..++++++|+.++.++.+++.+.   .+  ..++|++||..+...
T Consensus        83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~  162 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP  162 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred             HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCC
Confidence                     2478999988643211       1  12378999999999999988765   11  358999999764221


Q ss_pred             CCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh-cCCeEEEEecCceeCCCCCCCCcccc--ccc-
Q 043792          155 NNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD-RGISMVSINGGLVMGPDVTISNPYLK--GAA-  230 (294)
Q Consensus       155 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~~~~~~ilrp~~i~G~~~~~~~~~~~--~~~-  230 (294)
                      ....                       ..|+.+|.+.+.+.+.++.+ +|+++.+|.||.|..+..   .....  ..+ 
T Consensus       163 ~~~~-----------------------~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~---~~~~~~~~~~~  216 (259)
T d1oaaa_         163 YKGW-----------------------GLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQ---QLARETSKDPE  216 (259)
T ss_dssp             CTTC-----------------------HHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHH---HHHHHHCSCHH
T ss_pred             Cccc-----------------------hHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHH---HHhhhcCCCHH
Confidence            1111                       78999999999999998866 479999999999965531   10100  000 


Q ss_pred             ------cccCCCccccccHHHHHHHHHhhhcCcC-CCCe
Q 043792          231 ------EMYEDGVMASVDLRFYVDAHICVFEDVS-SYGR  262 (294)
Q Consensus       231 ------~~~~~~~~~~v~v~D~a~~i~~~~~~~~-~~~~  262 (294)
                            ...+.+.  +..++|+|++++.++.+.. .+|+
T Consensus       217 ~~~~~~~~~~~~r--~~~p~evA~~i~~ll~~~s~~TG~  253 (259)
T d1oaaa_         217 LRSKLQKLKSDGA--LVDCGTSAQKLLGLLQKDTFQSGA  253 (259)
T ss_dssp             HHHHHHHHHHTTC--SBCHHHHHHHHHHHHHHCCSCTTE
T ss_pred             HHHHHHhcCCCCC--CCCHHHHHHHHHHHhhhccCCCCC
Confidence                  1111222  6789999999999886432 3454

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=7.5e-20  Score=151.94  Aligned_cols=216  Identities=16%  Similarity=0.045  Sum_probs=147.7

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEE---ecCCCChhhHHHHHh-hccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAA---LHNHGKLQCIEEELI-NYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~---~r~~~~~~~l~~~~~-~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      +|.||||||++.||+++++.|+++|.+|+.+   .|+.+..+.+.+... ......++..+.+|++|.+++.++++    
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            4678999999999999999999999876555   444443333333111 23345689999999999999988875    


Q ss_pred             -cCCEEEecCCCCCCCCcch------hhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHSTYD------ELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~~~------~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                       .+|++||+++........+      ++.+++|+.++.++.+++...   .+-.++|++||..+.......         
T Consensus        82 g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~---------  152 (285)
T d1jtva_          82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFN---------  152 (285)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTC---------
T ss_pred             cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCc---------
Confidence             3699999988755442221      388999999999888876433   255799999998643322111         


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccC----------
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYE----------  234 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~----------  234 (294)
                                    ..|+.+|.+.+.+.+.++.+   +|++++++.||.|-.+....   ..........          
T Consensus       153 --------------~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~---~~~~~~~~~~~~~~~~~~~~  215 (285)
T d1jtva_         153 --------------DVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEK---VLGSPEEVLDRTDIHTFHRF  215 (285)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC----------CCHHHHHHTSCHHHHHHH
T ss_pred             --------------hHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHH---hccCHHHHhhccchhHHHHH
Confidence                          77999999999999998876   48999999999996554211   1110000000          


Q ss_pred             --------C-CccccccHHHHHHHHHhhhcCcCCCCeEEeec
Q 043792          235 --------D-GVMASVDLRFYVDAHICVFEDVSSYGRYLCFN  267 (294)
Q Consensus       235 --------~-~~~~~v~v~D~a~~i~~~~~~~~~~~~~~~~~  267 (294)
                              . ....+...+|+|++++.++..+...-+|+...
T Consensus       216 ~~~~~~~~~~~~~~~~~PeeVA~~v~~~~~~~~p~~ry~~g~  257 (285)
T d1jtva_         216 YQYLAHSKQVFREAAQNPEEVAEVFLTALRAPKPTLRYFTTE  257 (285)
T ss_dssp             HHHHHHHHHHHHHHCBCHHHHHHHHHHHHHCSSCCSEEESCS
T ss_pred             HHHHHHHhhhhcccCCCHHHHHHHHHHHHhCCCCCeEEecHH
Confidence                    0 00115578999999999998765444565543

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=5.5e-19  Score=144.04  Aligned_cols=210  Identities=16%  Similarity=0.049  Sum_probs=148.6

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-----   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----   97 (294)
                      +.++|.+|||||++.||+.+++.|+++|++|++++|+.+..+.+.+++     .........|+.+...+++...     
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFAPADVTSEKDVQTALALAKGK   76 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCCcccccccccccccccccccccccc
Confidence            567899999999999999999999999999999999998887766643     3478888999998876655543     


Q ss_pred             --cCCEEEecCCCCCCCC------------cchhhhHhHhhHHHHHHHHHHHhc---------CCCcEEEEecCcceeee
Q 043792           98 --GCSGLFYSFEPPSDHS------------TYDELTAEVETMAAHNVLEACAQT---------NTVDKVVFTSSLTAVVW  154 (294)
Q Consensus        98 --~~d~Vih~a~~~~~~~------------~~~~~~~~~n~~~~~~ll~~~~~~---------~~~~~~v~~Ss~~~~~~  154 (294)
                        ..|.++++++......            +..++.+++|+.++.++.+++.+.         .+-.++|++||..+...
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~  156 (248)
T d2o23a1          77 FGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG  156 (248)
T ss_dssp             HSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC
T ss_pred             cccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccC
Confidence              4688888754432211            112378999999999999987543         12347999999864332


Q ss_pred             CCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc-cccccc
Q 043792          155 NNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP-YLKGAA  230 (294)
Q Consensus       155 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~-~~~~~~  230 (294)
                      ....                       ..|+.+|.+.+.+.+.++.+.   |+++.+|.||.+..+....... ..+...
T Consensus       157 ~~~~-----------------------~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~  213 (248)
T d2o23a1         157 QVGQ-----------------------AAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLA  213 (248)
T ss_dssp             CTTC-----------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHH
T ss_pred             CCCc-----------------------hHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHHHHHHHH
Confidence            2111                       789999999999999998774   7999999999997665221110 111000


Q ss_pred             cccC-CCccccccHHHHHHHHHhhhcCcCCCCe
Q 043792          231 EMYE-DGVMASVDLRFYVDAHICVFEDVSSYGR  262 (294)
Q Consensus       231 ~~~~-~~~~~~v~v~D~a~~i~~~~~~~~~~~~  262 (294)
                      ...+ .+  .+..++|+|.+++.++...-.+|+
T Consensus       214 ~~~pl~~--R~g~peevA~~v~fL~s~~~itGq  244 (248)
T d2o23a1         214 SQVPFPS--RLGDPAEYAHLVQAIIENPFLNGE  244 (248)
T ss_dssp             HTCSSSC--SCBCHHHHHHHHHHHHHCTTCCSC
T ss_pred             hcCCCCC--CCcCHHHHHHHHHHHHhCCCCCce
Confidence            1111 12  267899999999999876545554

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.84  E-value=5.1e-20  Score=153.92  Aligned_cols=224  Identities=12%  Similarity=0.033  Sum_probs=153.4

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC---------hhhHHHHHhhccCCCCeEEEECCCCChhHHH
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK---------LQCIEEELINYNEEKKLKVFQADPFDYHSLV   93 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---------~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~   93 (294)
                      ..++|++|||||++.||+.+++.|+++|++|++.+|+.+.         .+.+.+++.     .......+|+.|.++.+
T Consensus         4 ~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~d~~~~~~~~   78 (302)
T d1gz6a_           4 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIR-----RRGGKAVANYDSVEAGE   78 (302)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHH-----HTTCEEEEECCCGGGHH
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHh-----hcccccccccchHHHHH
Confidence            4568999999999999999999999999999999876432         122222211     13345567777776665


Q ss_pred             HHhc-------cCCEEEecCCCCCCCCcc------hhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCC
Q 043792           94 NALK-------GCSGLFYSFEPPSDHSTY------DELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNH  157 (294)
Q Consensus        94 ~~~~-------~~d~Vih~a~~~~~~~~~------~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~  157 (294)
                      ++++       ++|++|||||........      .++.+++|+.++.++.+++.+.   ++-.++|++||..+.. +..
T Consensus        79 ~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~-~~~  157 (302)
T d1gz6a_          79 KLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIY-GNF  157 (302)
T ss_dssp             HHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH-CCT
T ss_pred             HHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcC-CCC
Confidence            5543       589999999976543222      1388999999999998876543   2456999999987533 222


Q ss_pred             CCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccccccC
Q 043792          158 RDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAAEMYE  234 (294)
Q Consensus       158 ~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~  234 (294)
                      .    .                  ..|+.+|.+.+.+.+.++.+   +|+++.+|.||.+-...    .   .    ..+
T Consensus       158 ~----~------------------~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~----~---~----~~~  204 (302)
T d1gz6a_         158 G----Q------------------ANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMT----E---T----VMP  204 (302)
T ss_dssp             T----C------------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTT----G---G----GSC
T ss_pred             C----c------------------HHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcch----h---h----cCc
Confidence            2    2                  78999999999999998876   48999999999762211    1   1    111


Q ss_pred             CCccccccHHHHHHHHHhhhcCc-CCCCe-EEeec--------------------ccccHHHHHHHHHHHhCC
Q 043792          235 DGVMASVDLRFYVDAHICVFEDV-SSYGR-YLCFN--------------------HVINCNEDAMKLARMLLP  285 (294)
Q Consensus       235 ~~~~~~v~v~D~a~~i~~~~~~~-~~~~~-~~~~~--------------------~~~s~~~~~~~~~~~~~~  285 (294)
                      .....++..+|+|.++++++... ..+|+ +.+.+                    .+.|..++.+.+.+....
T Consensus       205 ~~~~~~~~PedvA~~v~fL~S~~a~itG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~t~e~i~~~~~~i~d~  277 (302)
T d1gz6a_         205 EDLVEALKPEYVAPLVLWLCHESCEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICDF  277 (302)
T ss_dssp             HHHHHHSCGGGTHHHHHHHTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTCC
T ss_pred             HhhHhcCCHHHHHHHHHHHcCCCcCCCCcEEEeCCCceeEEEEeecCcccccCCCCCCCHHHHHHHHHHHhCc
Confidence            11122566899999999988532 22443 22211                    235778888888776543

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=5.5e-20  Score=152.30  Aligned_cols=219  Identities=16%  Similarity=0.041  Sum_probs=145.8

Q ss_pred             CCeE-EEeCCCchHHHHHHHHHHHC-CCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           26 TKTV-CVMDASGHFASALVRRLLLR-GYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        26 ~~~v-lItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      +|+| |||||++.||..+++.|+++ |++|++.+|+.++.+...+++  .....++.++.+|++|.++++++++      
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l--~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~   79 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQL--QAEGLSPRFHQLDIDDLQSIRALRDFLRKEY   79 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHH--HHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHH--HhcCCcEEEEEEecCCHHHHHHHHHHHHHhc
Confidence            4555 99999999999999999986 899999999988877666643  2345678999999999998877764      


Q ss_pred             -cCCEEEecCCCCCCCCcc---h---hhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCC------C
Q 043792           98 -GCSGLFYSFEPPSDHSTY---D---ELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPT------S  163 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~~---~---~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~------~  163 (294)
                       .+|++|||||........   .   +..+++|+.++..+.+++... +.-.++|++||..+....... .|.      .
T Consensus        80 g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~-~~y~~~k~~~  158 (275)
T d1wmaa1          80 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSC-SPELQQKFRS  158 (275)
T ss_dssp             SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTS-CHHHHHHHHC
T ss_pred             CCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceecccccc-chhhhhhhcc
Confidence             479999999975433221   1   267999999999999998765 222589999997532211000 000      0


Q ss_pred             CCCCC---------------CCCCChhhhhhccchhHhhHHHHHHHHHHHHHh-------cCCeEEEEecCceeCCCCCC
Q 043792          164 HDFDE---------------RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD-------RGISMVSINGGLVMGPDVTI  221 (294)
Q Consensus       164 ~~~~e---------------~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-------~~~~~~ilrp~~i~G~~~~~  221 (294)
                      ....+               ....  .....+...|+.||.+...+.+.++.+       .++++.++.||.|-.+..  
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~--  234 (275)
T d1wmaa1         159 ETITEEELVGLMNKFVEDTKKGVH--QKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMA--  234 (275)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHTTCT--TTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTT--
T ss_pred             cccchhhhccccccchhccccccc--ccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcc--
Confidence            00000               0000  000011157999999988777665544       389999999999854431  


Q ss_pred             CCccccccccccCCCccccccHHHHHHHHHhhhcCc----CCCCeEEe
Q 043792          222 SNPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDV----SSYGRYLC  265 (294)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~v~v~D~a~~i~~~~~~~----~~~~~~~~  265 (294)
                           ..         ..+..++|.|+.+++++..+    ...|+|+.
T Consensus       235 -----~~---------~~~~~pee~A~~~~~~a~~~~~~~~~~G~~~~  268 (275)
T d1wmaa1         235 -----GP---------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS  268 (275)
T ss_dssp             -----CT---------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred             -----cC---------cccCCHHHHHHHHHHHHcCChhhcCCCeEEEE
Confidence                 10         01335789999888875322    22466764

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.82  E-value=1.4e-18  Score=141.77  Aligned_cols=204  Identities=17%  Similarity=0.091  Sum_probs=137.6

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCC--eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGY--TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .|+||||||++.||.+++++|+++|+  +|++..|+.++.+.+.+     ....++.++.+|++|.++++++++      
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~-----~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   77 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS-----IKDSRVHVLPLTVTCDKSLDTFVSKVGEIV   77 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT-----CCCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHH-----hhCCceEEEEEecCCHHHHHHHHHHHHHHh
Confidence            48999999999999999999999995  68888998877666544     234579999999999988876653      


Q ss_pred             ---cCCEEEecCCCCCCC----Ccc---hhhhHhHhhHHHHHHHHHHHhc------C--------CCcEEEEecCcceee
Q 043792           98 ---GCSGLFYSFEPPSDH----STY---DELTAEVETMAAHNVLEACAQT------N--------TVDKVVFTSSLTAVV  153 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~----~~~---~~~~~~~n~~~~~~ll~~~~~~------~--------~~~~~v~~Ss~~~~~  153 (294)
                         .+|++|||||.....    ...   .++.+++|+.++.++.+++...      +        ...+++.+|+.....
T Consensus        78 ~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~  157 (250)
T d1yo6a1          78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSI  157 (250)
T ss_dssp             GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCS
T ss_pred             CCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccc
Confidence               279999999864321    111   1278999999999988875421      0        124677777653211


Q ss_pred             eCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccc
Q 043792          154 WNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAA  230 (294)
Q Consensus       154 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~  230 (294)
                      .....         . ....+.      ..|+.||.+...+.+.++.+   .|+++.++.||.|-.+.       ...  
T Consensus       158 ~~~~~---------~-~~~~~~------~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m-------~~~--  212 (250)
T d1yo6a1         158 TDNTS---------G-SAQFPV------LAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNL-------GGK--  212 (250)
T ss_dssp             TTCCS---------T-TSSSCB------HHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC----------------
T ss_pred             cCCcc---------c-ccchhH------HHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCC-------CCC--
Confidence            11110         0 001111      56999999999999998876   47999999999984332       110  


Q ss_pred             cccCCCccccccHHHHHHHHHhhhcCc--CCCCeEEee
Q 043792          231 EMYEDGVMASVDLRFYVDAHICVFEDV--SSYGRYLCF  266 (294)
Q Consensus       231 ~~~~~~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~  266 (294)
                             ...+.+++.++.++..+.+.  ..+|+|+..
T Consensus       213 -------~~~~~~e~~a~~~~~~~~~~~~~~sG~f~~~  243 (250)
T d1yo6a1         213 -------NAALTVEQSTAELISSFNKLDNSHNGRFFMR  243 (250)
T ss_dssp             -------------HHHHHHHHHHHTTCCGGGTTCEEET
T ss_pred             -------CCCCCHHHHHHHHHHHHhcCCCCCCeEEECC
Confidence                   11456788898888888653  335676543

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.82  E-value=3.9e-19  Score=145.85  Aligned_cols=220  Identities=14%  Similarity=0.099  Sum_probs=152.3

Q ss_pred             CCCCeEEEeCCCc--hHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           24 NATKTVCVMDASG--HFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        24 ~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      .++|+||||||+|  .||+++++.|+++|++|++.+|+.+..+.+.+   ..........+..|+.+..+..+.+.    
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEE---FAAQLGSDIVLQCDVAEDASIDTMFAELGK   79 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHH---HHHHTTCCCEEECCTTCHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HHhhcCCcceeecccchHHHHHHHHHHhhh
Confidence            4689999999998  79999999999999999999998765555544   33334567788899999887766654    


Q ss_pred             ---cCCEEEecCCCCCCCCcc----h-------hhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHSTY----D-------ELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPT  162 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~~~----~-------~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~  162 (294)
                         ..|++||+++........    +       ...+..|+.+...+.+++... ++-+.+|++||.++.......    
T Consensus        80 ~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~~~----  155 (258)
T d1qsga_          80 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNY----  155 (258)
T ss_dssp             TCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTT----
T ss_pred             cccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCCCc----
Confidence               359999998764432211    1       155677788888888887665 223468888887532221111    


Q ss_pred             CCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCCCCc---cccccccccCCC
Q 043792          163 SHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTISNP---YLKGAAEMYEDG  236 (294)
Q Consensus       163 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~~~~---~~~~~~~~~~~~  236 (294)
                                         ..|+.+|.+.+.+.+.++.+.   |+++.+|+||.|..+.......   ..+......+-+
T Consensus       156 -------------------~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~  216 (258)
T d1qsga_         156 -------------------NVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIR  216 (258)
T ss_dssp             -------------------THHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTS
T ss_pred             -------------------HHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCC
Confidence                               679999999999999988774   7999999999997665221110   000000111122


Q ss_pred             ccccccHHHHHHHHHhhhcCc--CCCCeEEeeccccc
Q 043792          237 VMASVDLRFYVDAHICVFEDV--SSYGRYLCFNHVIN  271 (294)
Q Consensus       237 ~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~~~~s  271 (294)
                      +  +..++|+|.+++.++.+.  ..+|+.+..++.++
T Consensus       217 R--~~~peeia~~v~fL~s~~s~~itG~~i~vDGG~~  251 (258)
T d1qsga_         217 R--TVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFS  251 (258)
T ss_dssp             S--CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             C--CcCHHHHHHHHHHHhCchhcCccCceEEECcCHH
Confidence            2  788999999999999654  35677665554444

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=5.9e-19  Score=145.47  Aligned_cols=201  Identities=14%  Similarity=-0.024  Sum_probs=143.0

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------   97 (294)
                      .++|++|||||++.||+++++.|+++|++|++++|+.++.+.+..++ .......+..+.+|+.+.......++      
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   90 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHC-LELGAASAHYIAGTMEDMTFAEQFVAQAGKLM   90 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-HHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hhhhcccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence            56899999999999999999999999999999999987776665532 12334567888999998877665543      


Q ss_pred             -cCCEEEecCCCCCCCCc---ch---hhhHhHhhHHHHHHHHHHHhc--CCCcEEEEecCcceeeeCCCCCCCCCCCCCC
Q 043792           98 -GCSGLFYSFEPPSDHST---YD---ELTAEVETMAAHNVLEACAQT--NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE  168 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~---~~---~~~~~~n~~~~~~ll~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e  168 (294)
                       .+|+++++|+.......   ..   ...+++|+.++..+.+++...  ++-.++|++||.++......     .     
T Consensus        91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~p~-----~-----  160 (269)
T d1xu9a_          91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPM-----V-----  160 (269)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTT-----C-----
T ss_pred             CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCCCC-----c-----
Confidence             47999999876543321   11   278999999988888776533  12258999999863221111     1     


Q ss_pred             CCCCChhhhhhccchhHhhHHHHHHHHHHHHHh-----cCCeEEEEecCceeCCCCCCCCccccccccccCCCccccccH
Q 043792          169 RNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD-----RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDL  243 (294)
Q Consensus       169 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v  243 (294)
                                   ..|+.||.+.+.+.+.++.+     .++++..+.||.|-.+.   ......+.      ........
T Consensus       161 -------------~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~---~~~~~~~~------~~~~~~~~  218 (269)
T d1xu9a_         161 -------------AAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET---AMKAVSGI------VHMQAAPK  218 (269)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH---HHHHSCGG------GGGGCBCH
T ss_pred             -------------hHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcH---HHHhccCC------ccccCCCH
Confidence                         78999999999999988865     35889999999984332   00011111      11124567


Q ss_pred             HHHHHHHHhhhcCc
Q 043792          244 RFYVDAHICVFEDV  257 (294)
Q Consensus       244 ~D~a~~i~~~~~~~  257 (294)
                      +++|+.++..+...
T Consensus       219 e~~a~~i~~~~~~~  232 (269)
T d1xu9a_         219 EECALEIIKGGALR  232 (269)
T ss_dssp             HHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHhhcC
Confidence            99999988876543

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.80  E-value=5e-19  Score=143.06  Aligned_cols=193  Identities=10%  Similarity=0.038  Sum_probs=135.2

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHh-------c
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNAL-------K   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~-------~   97 (294)
                      ++|+||||||+|.||+.+++.|+++|++|.+++++.....            .....+..|..+.++...+.       .
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------------SASVIVKMTDSFTEQADQVTAEVGKLLG   68 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------------SEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------------cccceeecccCcHHHHHHHHHHHHHHhC
Confidence            3689999999999999999999999999999988754311            12334455655554433222       2


Q ss_pred             --cCCEEEecCCCCCC-C---Ccc-h--hhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCCC
Q 043792           98 --GCSGLFYSFEPPSD-H---STY-D--ELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFD  167 (294)
Q Consensus        98 --~~d~Vih~a~~~~~-~---~~~-~--~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~  167 (294)
                        ++|++|||||.... .   ... +  +..+++|+.++.++.+++.+. ++-.++|++||.++.......         
T Consensus        69 ~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~---------  139 (236)
T d1dhra_          69 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGM---------  139 (236)
T ss_dssp             TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTB---------
T ss_pred             CCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccCC---------
Confidence              37999999985321 1   111 1  267899999999999888765 223689999998643222111         


Q ss_pred             CCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh-----cCCeEEEEecCceeCCCCCCCCccccccccccCCCc-cccc
Q 043792          168 ERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD-----RGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGV-MASV  241 (294)
Q Consensus       168 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~-~~~v  241 (294)
                                    ..|+.||.+.+.+.+.++.+     .|+++.++.||.+..+..   .   +    ..++.. ..|+
T Consensus       140 --------------~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~---~---~----~~~~~~~~~~~  195 (236)
T d1dhra_         140 --------------IGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMN---R---K----SMPEADFSSWT  195 (236)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHH---H---H----HSTTSCGGGSE
T ss_pred             --------------cccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcc---h---h----hCccchhhcCC
Confidence                          78999999999999999865     379999999999965541   1   0    111111 2378


Q ss_pred             cHHHHHHHHHhhhcCcC--CCCe
Q 043792          242 DLRFYVDAHICVFEDVS--SYGR  262 (294)
Q Consensus       242 ~v~D~a~~i~~~~~~~~--~~~~  262 (294)
                      ..+|+|+.+..++....  .+|.
T Consensus       196 ~pe~va~~~~~l~s~~~~~i~G~  218 (236)
T d1dhra_         196 PLEFLVETFHDWITGNKRPNSGS  218 (236)
T ss_dssp             EHHHHHHHHHHHHTTTTCCCTTC
T ss_pred             CHHHHHHHHHHHhCCCccCCCCC
Confidence            89999999999886543  3454

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.79  E-value=1.1e-18  Score=141.04  Aligned_cols=192  Identities=13%  Similarity=0.085  Sum_probs=131.7

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHH-------h--c
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNA-------L--K   97 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-------~--~   97 (294)
                      .|||||||+|.||+.+++.|+++|++|++++|+.....            .....+.+|..+.+.....       +  .
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   70 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------------DSNILVDGNKNWTEQEQSILEQTASSLQGS   70 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------------SEEEECCTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc------------cccceeccccCchhHHHHHHHHHHHHhcCC
Confidence            57999999999999999999999999999999865321            1334455666555433222       2  2


Q ss_pred             cCCEEEecCCCCCCC----Ccc---hhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEecCcceeeeCCCCCCCCCCCCCCC
Q 043792           98 GCSGLFYSFEPPSDH----STY---DELTAEVETMAAHNVLEACAQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDER  169 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~----~~~---~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~  169 (294)
                      ++|++|||||.....    ...   .+.++++|+.++..+.+++... +.-.++|++||..+..... .    .      
T Consensus        71 ~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~-~----~------  139 (235)
T d1ooea_          71 QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTP-S----M------  139 (235)
T ss_dssp             CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT-T----B------
T ss_pred             CeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcc-c----c------
Confidence            479999999863321    111   1267899999999998887765 2225899999976332111 1    1      


Q ss_pred             CCCChhhhhhccchhHhhHHHHHHHHHHHHHhc-----CCeEEEEecCceeCCCCCCCCccccccccccCCCc-cccccH
Q 043792          170 NWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR-----GISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGV-MASVDL  243 (294)
Q Consensus       170 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~ilrp~~i~G~~~~~~~~~~~~~~~~~~~~~-~~~v~v  243 (294)
                                  ..|+.+|.+.+.+.+.++.+.     ++++..+.||.+-.+.       .+.   ..++.. ..|+..
T Consensus       140 ------------~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~-------~~~---~~~~~~~~~~~~~  197 (235)
T d1ooea_         140 ------------IGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM-------NRK---WMPNADHSSWTPL  197 (235)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH-------HHH---HSTTCCGGGCBCH
T ss_pred             ------------cchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcc-------hhh---hCcCCccccCCCH
Confidence                        789999999999999998663     6789999999884432       111   111212 238889


Q ss_pred             HHHHHHHHhhhcCc---CCCCeE
Q 043792          244 RFYVDAHICVFEDV---SSYGRY  263 (294)
Q Consensus       244 ~D~a~~i~~~~~~~---~~~~~~  263 (294)
                      +|+++.++..+..+   ..+|..
T Consensus       198 ~~va~~~~~~l~~~~~~~~tG~~  220 (235)
T d1ooea_         198 SFISEHLLKWTTETSSRPSSGAL  220 (235)
T ss_dssp             HHHHHHHHHHHHCGGGCCCTTCE
T ss_pred             HHHHHHHHHHhcCccccCCCceE
Confidence            99999987655432   235653

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.77  E-value=8.8e-18  Score=138.84  Aligned_cols=220  Identities=13%  Similarity=0.072  Sum_probs=140.6

Q ss_pred             CCCCeEEEeCCCc--hHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc----
Q 043792           24 NATKTVCVMDASG--HFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK----   97 (294)
Q Consensus        24 ~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----   97 (294)
                      .++|++|||||+|  .||.++++.|+++|++|++++|+++..+.+.+   .........++..|++++.++.++++    
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~---l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~   79 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRP---IAQELNSPYVYELDVSKEEHFKSLYNSVKK   79 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHH---HHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HHhhCCceeEeeecccchhhHHHHHHHHHH
Confidence            4689999999887  79999999999999999999998665555544   33345567788999999988777764    


Q ss_pred             ---cCCEEEecCCCCCCCC---cc----hh---hhHhHhhHHHHHHHHHHHhcCCC-cEEEEecCcceeeeCCCCCCCCC
Q 043792           98 ---GCSGLFYSFEPPSDHS---TY----DE---LTAEVETMAAHNVLEACAQTNTV-DKVVFTSSLTAVVWNNHRDNPTS  163 (294)
Q Consensus        98 ---~~d~Vih~a~~~~~~~---~~----~~---~~~~~n~~~~~~ll~~~~~~~~~-~~~v~~Ss~~~~~~~~~~~~~~~  163 (294)
                         .+|++||+++......   ..    ..   .....+......+.....+..+. ..++..|+.+.......     .
T Consensus        80 ~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~-----~  154 (274)
T d2pd4a1          80 DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAH-----Y  154 (274)
T ss_dssp             HTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT-----C
T ss_pred             HcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccccccc-----c
Confidence               4799999988644211   11    11   22223333444444444443122 23555555432111111     1


Q ss_pred             CCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCc--cccccccccCCCcc
Q 043792          164 HDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNP--YLKGAAEMYEDGVM  238 (294)
Q Consensus       164 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~--~~~~~~~~~~~~~~  238 (294)
                                        ..|+.+|.+.+.+.+..+.+   +|+++.++.||.+..+.......  ..... ........
T Consensus       155 ------------------~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~-~~~~~p~~  215 (274)
T d2pd4a1         155 ------------------NVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKW-NEINAPLR  215 (274)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHH-HHHHSTTS
T ss_pred             ------------------hhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHH-Hhhhhhcc
Confidence                              77999999999999888766   47999999999997655211110  00000 00011112


Q ss_pred             ccccHHHHHHHHHhhhcCcC--CCCeEEeecccc
Q 043792          239 ASVDLRFYVDAHICVFEDVS--SYGRYLCFNHVI  270 (294)
Q Consensus       239 ~~v~v~D~a~~i~~~~~~~~--~~~~~~~~~~~~  270 (294)
                      .+..++|+|.+++.++....  .+|+.+..++.+
T Consensus       216 r~~~pedIA~~v~fL~S~~s~~itG~~i~vDGG~  249 (274)
T d2pd4a1         216 KNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGY  249 (274)
T ss_dssp             SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCcCHHHHHHHHHHHhChhhCCCcCceEEECCCh
Confidence            27889999999999987543  467765555443

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.75  E-value=4.6e-17  Score=135.14  Aligned_cols=220  Identities=12%  Similarity=0.040  Sum_probs=140.8

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC-ChhhHHHHHhhccCCCCeEE-----------------EECCCC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG-KLQCIEEELINYNEEKKLKV-----------------FQADPF   87 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~l~~~~~~~~~~~~v~~-----------------~~~Dl~   87 (294)
                      +..+|||||++.||+.+++.|+++|++|++.+|+.. ..+.+.+++.. ........                 +.+|++
T Consensus         2 ~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~   80 (284)
T d1e7wa_           2 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNA-RRPNSAITVQADLSNVATAPVSGADGSAPVT   80 (284)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-HSTTCEEEEECCCSSSCBCCCC----CCCBC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHh-hcCCceEEEEeecccccccccccccccccCC
Confidence            568899999999999999999999999999877653 34444443211 12223333                 345688


Q ss_pred             ChhHHHHHhc-------cCCEEEecCCCCCCCCcch--------------------hhhHhHhhHHHHHHHHHHHhc---
Q 043792           88 DYHSLVNALK-------GCSGLFYSFEPPSDHSTYD--------------------ELTAEVETMAAHNVLEACAQT---  137 (294)
Q Consensus        88 ~~~~~~~~~~-------~~d~Vih~a~~~~~~~~~~--------------------~~~~~~n~~~~~~ll~~~~~~---  137 (294)
                      +.++++++++       ++|++|||||........+                    ...+.+|+.+...+.+++.+.   
T Consensus        81 ~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~  160 (284)
T d1e7wa_          81 LFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG  160 (284)
T ss_dssp             HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhh
Confidence            8887777764       5799999998754321110                    136788999998888875432   


Q ss_pred             ------CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEE
Q 043792          138 ------NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVS  208 (294)
Q Consensus       138 ------~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i  208 (294)
                            ++..++|+++|... ..+...    .                  ..|+.+|.+.+.+.+.++.+   +|+++.+
T Consensus       161 ~~~~~~~~~~~ii~~~s~~~-~~~~~~----~------------------~~Y~asKaal~~lt~~lA~el~~~gIrvN~  217 (284)
T d1e7wa_         161 TPAKHRGTNYSIINMVDAMT-NQPLLG----Y------------------TIYTMAKGALEGLTRSAALELAPLQIRVNG  217 (284)
T ss_dssp             SCGGGSCSCEEEEEECCTTT-TSCCTT----C------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             hHHHhcCCCCcccccccccc-cCCccc----e------------------eeeccccccchhhhHHHHHHhCCccccccc
Confidence                  13346777777642 111111    1                  67999999999999998866   4899999


Q ss_pred             EecCceeCCCCCCCCccccccccccCCCccccccHHHHHHHHHhhhcCcC--CCCeEEeeccccc
Q 043792          209 INGGLVMGPDVTISNPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVS--SYGRYLCFNHVIN  271 (294)
Q Consensus       209 lrp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~~i~~~~~~~~--~~~~~~~~~~~~s  271 (294)
                      |.||.+-..... .....+......+- ...+...+|+|++++.++....  .+|+.+..++.++
T Consensus       218 I~PG~t~~~~~~-~~~~~~~~~~~~pl-~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~s  280 (284)
T d1e7wa_         218 VGPGLSVLVDDM-PPAVWEGHRSKVPL-YQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS  280 (284)
T ss_dssp             EEESSBCCGGGS-CHHHHHHHHTTCTT-TTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             cccccccccccC-CHHHHHHHHhcCCC-CCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChh
Confidence            999964222110 00011111111110 1126789999999999986543  4677665555444

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.75  E-value=2e-17  Score=134.05  Aligned_cols=204  Identities=16%  Similarity=0.079  Sum_probs=139.6

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc------cCC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK------GCS  100 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------~~d  100 (294)
                      |++|||||++.||+++++.|+++|++|++++|+.+.              .+...+.+|+.+......+..      ..+
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~--------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~   67 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREG--------------EDLIYVEGDVTREEDVRRAVARAQEEAPLF   67 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS--------------SSSEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc--------------ccceEeeccccchhhhHHHHHhhhcccccc
Confidence            789999999999999999999999999999998643              256778899998876665543      234


Q ss_pred             EEEecCCCCCCC--------C--cchhhhHhHhhHHHHHHHHHHHhc---------CCCcEEEEecCcceeeeCCCCCCC
Q 043792          101 GLFYSFEPPSDH--------S--TYDELTAEVETMAAHNVLEACAQT---------NTVDKVVFTSSLTAVVWNNHRDNP  161 (294)
Q Consensus       101 ~Vih~a~~~~~~--------~--~~~~~~~~~n~~~~~~ll~~~~~~---------~~~~~~v~~Ss~~~~~~~~~~~~~  161 (294)
                      .++++++.....        .  ...++.+++|+.+...+.+.+...         .+-.++|++||..+.......   
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~---  144 (241)
T d1uaya_          68 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQ---  144 (241)
T ss_dssp             EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTC---
T ss_pred             chhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCc---
Confidence            444443321110        1  112377899999888887765432         134589999998643322222   


Q ss_pred             CCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccccccc-cccCCCc
Q 043792          162 TSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYLKGAA-EMYEDGV  237 (294)
Q Consensus       162 ~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~~~~~-~~~~~~~  237 (294)
                                          ..|+.+|.+.+.+.+.++.+   +|+++.+|.||.|..+......   .... .......
T Consensus       145 --------------------~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~---~~~~~~~~~~~~  201 (241)
T d1uaya_         145 --------------------AAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP---EKAKASLAAQVP  201 (241)
T ss_dssp             --------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC---HHHHHHHHTTCC
T ss_pred             --------------------hhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhh---hhHHHHHHhcCC
Confidence                                78999999999999998876   4899999999999655421111   1000 0111100


Q ss_pred             --cccccHHHHHHHHHhhhcCcCCCCeEEeecccc
Q 043792          238 --MASVDLRFYVDAHICVFEDVSSYGRYLCFNHVI  270 (294)
Q Consensus       238 --~~~v~v~D~a~~i~~~~~~~~~~~~~~~~~~~~  270 (294)
                        ..+..++|+|.+++.++.....+|+.+..++.+
T Consensus       202 ~~~R~g~pedvA~~v~fL~s~~~iTG~~i~VDGG~  236 (241)
T d1uaya_         202 FPPRLGRPEEYAALVLHILENPMLNGEVVRLDGAL  236 (241)
T ss_dssp             SSCSCCCHHHHHHHHHHHHHCTTCCSCEEEESTTC
T ss_pred             CCCCCcCHHHHHHHHHHHHhCCCCCCCEEEECCcc
Confidence              126679999999999998666678766554443

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.69  E-value=1.4e-15  Score=124.87  Aligned_cols=218  Identities=13%  Similarity=0.052  Sum_probs=136.0

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCCh-hhHHHHHhhccCCCCeEEEECCCCCh----hHHHHHh-----
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKL-QCIEEELINYNEEKKLKVFQADPFDY----HSLVNAL-----   96 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~l~~~~~~~~~~~~v~~~~~Dl~~~----~~~~~~~-----   96 (294)
                      ...|||||++.||+.+++.|+++|++|++++|+.++. +.+.+++ ..........+..|+.+.    +.+.+++     
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAEL-NAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFR   80 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH-HHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHH-HhhcCCceEEEecccccchhHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999986543 4444432 123344667777766543    2233322     


Q ss_pred             --ccCCEEEecCCCCCCCCcc-----------------hhhhHhHhhHHHHHHHHHHHhc--------CCCcEEEEecCc
Q 043792           97 --KGCSGLFYSFEPPSDHSTY-----------------DELTAEVETMAAHNVLEACAQT--------NTVDKVVFTSSL  149 (294)
Q Consensus        97 --~~~d~Vih~a~~~~~~~~~-----------------~~~~~~~n~~~~~~ll~~~~~~--------~~~~~~v~~Ss~  149 (294)
                        .++|++|||||........                 ....+..|+.+...........        .....++.+|+.
T Consensus        81 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (266)
T d1mxha_          81 AFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDA  160 (266)
T ss_dssp             HHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCG
T ss_pred             HhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhc
Confidence              2589999999865432110                 0144556666655555554433        122345666665


Q ss_pred             ceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCCccc
Q 043792          150 TAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISNPYL  226 (294)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~~~~  226 (294)
                      ........     .                  ..|+.||.+.+.+.+.++.+   +|+++..|.||.+..+...... ..
T Consensus       161 ~~~~~~~~-----~------------------~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~~~-~~  216 (266)
T d1mxha_         161 MTDLPLPG-----F------------------CVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQE-TQ  216 (266)
T ss_dssp             GGGSCCTT-----C------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCHH-HH
T ss_pred             cccccCcc-----h------------------hhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCCHH-HH
Confidence            42111111     1                  78999999999999988866   4899999999998765422111 11


Q ss_pred             cccccccCCCccccccHHHHHHHHHhhhcCcC--CCCeEEeecccc
Q 043792          227 KGAAEMYEDGVMASVDLRFYVDAHICVFEDVS--SYGRYLCFNHVI  270 (294)
Q Consensus       227 ~~~~~~~~~~~~~~v~v~D~a~~i~~~~~~~~--~~~~~~~~~~~~  270 (294)
                      +......+-+. .+...+|+|.+++.++.+..  .+|+.+..++.+
T Consensus       217 ~~~~~~~pl~r-~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~  261 (266)
T d1mxha_         217 EEYRRKVPLGQ-SEASAAQIADAIAFLVSKDAGYITGTTLKVDGGL  261 (266)
T ss_dssp             HHHHTTCTTTS-CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHhcCCCCC-CCCCHHHHHHHHHHHhCchhCCccCCeEEECccH
Confidence            10001111111 14678999999999997643  477765555444

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.68  E-value=1.2e-15  Score=127.29  Aligned_cols=226  Identities=10%  Similarity=-0.009  Sum_probs=134.3

Q ss_pred             CCCCCCeEEEeCCCc--hHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhc---------cCCCCe-EEEECC--CC
Q 043792           22 SSNATKTVCVMDASG--HFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINY---------NEEKKL-KVFQAD--PF   87 (294)
Q Consensus        22 ~~~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~---------~~~~~v-~~~~~D--l~   87 (294)
                      ...++|++|||||+|  .||+.+++.|+++|++|++.+|++..........+..         ...... .....|  +.
T Consensus         4 ~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T d1d7oa_           4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcc
Confidence            356789999999987  8999999999999999999988643221111100000         000111 122222  21


Q ss_pred             ---------------------ChhHHH----HHhccCCEEEecCCCCCCCC------cc--hhhhHhHhhHHHHHHHHHH
Q 043792           88 ---------------------DYHSLV----NALKGCSGLFYSFEPPSDHS------TY--DELTAEVETMAAHNVLEAC  134 (294)
Q Consensus        88 ---------------------~~~~~~----~~~~~~d~Vih~a~~~~~~~------~~--~~~~~~~n~~~~~~ll~~~  134 (294)
                                           +.+.+.    +.+-++|++||+|+......      ..  ....+++|+.+..++.+++
T Consensus        84 ~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~  163 (297)
T d1d7oa_          84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF  163 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHH
Confidence                                 112222    22236899999998643211      11  1278899999999999988


Q ss_pred             Hhc-CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHH----hcCCeEEEE
Q 043792          135 AQT-NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAM----DRGISMVSI  209 (294)
Q Consensus       135 ~~~-~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~----~~~~~~~il  209 (294)
                      ... ..-.+.+.+++.+........    .                  ..|+.+|...+.+.+.++.    ++++++.+|
T Consensus       164 ~~~~~~~g~~~~~~~~~~~~~~~~~----~------------------~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I  221 (297)
T d1d7oa_         164 LPIMNPGGASISLTYIASERIIPGY----G------------------GGMSSAKAALESDTRVLAFEAGRKQNIRVNTI  221 (297)
T ss_dssp             GGGEEEEEEEEEEECGGGTSCCTTC----T------------------TTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
T ss_pred             HHHhhcCCcceeeeehhhccccccc----c------------------cceecccccccccccccchhccccceEEeccc
Confidence            765 111345555554322111111    1                  6799999888777665543    458999999


Q ss_pred             ecCceeCCCCCCCCc---cccccccccCCCccccccHHHHHHHHHhhhcCc--CCCCeEEeeccccc
Q 043792          210 NGGLVMGPDVTISNP---YLKGAAEMYEDGVMASVDLRFYVDAHICVFEDV--SSYGRYLCFNHVIN  271 (294)
Q Consensus       210 rp~~i~G~~~~~~~~---~~~~~~~~~~~~~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~~~~s  271 (294)
                      .||.+..+.......   +.+......+-++  +...+|+|.+++.++...  ..+|+.+..++.++
T Consensus       222 ~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR--~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s  286 (297)
T d1d7oa_         222 SAGPLGSRAAKAIGFIDTMIEYSYNNAPIQK--TLTADEVGNAAAFLVSPLASAITGATIYVDNGLN  286 (297)
T ss_dssp             EECCCBCCCSSCCSHHHHHHHHHHHHSSSCC--CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             ccccccchhhhhccCCHHHHHHHHhCCCCCC--CCCHHHHHHHHHHHhCchhcCCcCceEEECcCHh
Confidence            999998776322110   1111111112222  778999999999999643  34777665554443

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.66  E-value=2e-15  Score=123.98  Aligned_cols=217  Identities=11%  Similarity=0.059  Sum_probs=136.5

Q ss_pred             CCCCeEEEeCCCc--hHHHHHHHHHHHCCCeEEEEecCCCCh-hhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc---
Q 043792           24 NATKTVCVMDASG--HFASALVRRLLLRGYTVHAALHNHGKL-QCIEEELINYNEEKKLKVFQADPFDYHSLVNALK---   97 (294)
Q Consensus        24 ~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---   97 (294)
                      .++|++|||||+|  .||+++++.|+++|++|++.+|+..+. +.+.+     ....+...+++|+.++++...+++   
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~-----~~~~~~~~~~~dv~~~~~~~~~~~~v~   78 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD-----RLPAKAPLLELDVQNEEHLASLAGRVT   78 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHT-----TSSSCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHH-----HcCCceeeEeeecccccccccccchhh
Confidence            4679999999654  699999999999999999999876543 22322     234567889999999876655543   


Q ss_pred             -------cCCEEEecCCCCCCCC----c-----ch--hhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcceeeeCCCCC
Q 043792           98 -------GCSGLFYSFEPPSDHS----T-----YD--ELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWNNHRD  159 (294)
Q Consensus        98 -------~~d~Vih~a~~~~~~~----~-----~~--~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~~~~~~~~~~  159 (294)
                             .+|+++|+++......    .     ..  ...+..|+.......++.....+-...+.++|.........  
T Consensus        79 ~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~p~--  156 (268)
T d2h7ma1          79 EAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPA--  156 (268)
T ss_dssp             HHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCTT--
T ss_pred             hccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccccCcc--
Confidence                   3599999988643111    1     01  15566777777777777665522223444443321111110  


Q ss_pred             CCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHhc---CCeEEEEecCceeCCCCCC-----CCcccccccc
Q 043792          160 NPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMDR---GISMVSINGGLVMGPDVTI-----SNPYLKGAAE  231 (294)
Q Consensus       160 ~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~i~G~~~~~-----~~~~~~~~~~  231 (294)
                         .                  ..|+.+|.+.+.+.+.++.+.   |+++.+|.||.+-.+....     ..........
T Consensus       157 ---~------------------~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~  215 (268)
T d2h7ma1         157 ---Y------------------NWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQ  215 (268)
T ss_dssp             ---T------------------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHH
T ss_pred             ---c------------------chhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchH
Confidence               1                  679999999999999888763   7999999999986442100     0000000000


Q ss_pred             cc------CCC-ccccccHHHHHHHHHhhhcCc--CCCCeEEeecc
Q 043792          232 MY------EDG-VMASVDLRFYVDAHICVFEDV--SSYGRYLCFNH  268 (294)
Q Consensus       232 ~~------~~~-~~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~~  268 (294)
                      ..      ... ...+..++|+|++++.++...  ..+|+.+..++
T Consensus       216 ~~~~~~~~~~pl~rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDG  261 (268)
T d2h7ma1         216 LLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADG  261 (268)
T ss_dssp             HHHHHHHHHCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEEST
T ss_pred             HHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCEEEECc
Confidence            00      001 112667899999999999543  34677555443

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.64  E-value=1.2e-14  Score=118.51  Aligned_cols=218  Identities=14%  Similarity=0.072  Sum_probs=127.4

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHh--------c
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNAL--------K   97 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~--------~   97 (294)
                      ||.||||||++.||+++++.|+++|++|++++|+..+                   ...|+.+.+......        .
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-------------------~~~d~~~~~~~~~~~~~~~~~~~~   61 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-------------------VIADLSTAEGRKQAIADVLAKCSK   61 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-------------------EECCTTSHHHHHHHHHHHHTTCTT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-------------------HHHHhcCHHHHHHHHHHHHHHhCC
Confidence            6889999999999999999999999999999987532                   124666665444332        2


Q ss_pred             cCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhc---CCCcEEEEecCcceeeeCCCCCCCCCCCCCC--CCCC
Q 043792           98 GCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQT---NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDE--RNWS  172 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e--~~~~  172 (294)
                      .+|+++++|+....... ......+|..+...+.+.....   ........+++..........     .+...  ....
T Consensus        62 ~id~lv~~Ag~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~g~  135 (257)
T d1fjha_          62 GMDGLVLCAGLGPQTKV-LGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDK-----NPLALALEAGE  135 (257)
T ss_dssp             CCSEEEECCCCCTTCSS-HHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGG-----CTTHHHHHHTC
T ss_pred             CCcEEEEcCCCCCcHHH-HHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhh-----hhhhhhccCCc
Confidence            47999999986543332 2356777888777766654322   134455555553211111000     00000  0000


Q ss_pred             Chh--------hhhhccchhHhhHHHHHHHHHHHHHh---cCCeEEEEecCceeCCCCCCCC--c-cccccc-cccCCCc
Q 043792          173 DVN--------LCKKFKLWHGLSKTLAEKTAWALAMD---RGISMVSINGGLVMGPDVTISN--P-YLKGAA-EMYEDGV  237 (294)
Q Consensus       173 ~~~--------~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~i~G~~~~~~~--~-~~~~~~-~~~~~~~  237 (294)
                      ...        ........|+.+|.+.+.+.+.++.+   +|+++.+|.||.+-.+......  . ..+... ...+-+ 
T Consensus       136 ~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~Plg-  214 (257)
T d1fjha_         136 EAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMG-  214 (257)
T ss_dssp             HHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTT-
T ss_pred             EEEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCCC-
Confidence            000        00001146999999999999998866   4799999999999766522110  0 000000 011112 


Q ss_pred             cccccHHHHHHHHHhhhcCc--CCCCeEEeecccc
Q 043792          238 MASVDLRFYVDAHICVFEDV--SSYGRYLCFNHVI  270 (294)
Q Consensus       238 ~~~v~v~D~a~~i~~~~~~~--~~~~~~~~~~~~~  270 (294)
                       .+...+|+|.+++.++...  ..+|+.+..++.+
T Consensus       215 -R~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG~  248 (257)
T d1fjha_         215 -RRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGI  248 (257)
T ss_dssp             -SCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             -CCcCHHHHHHHHHHHhCchhCCccCceEEeCCCc
Confidence             2778999999999998544  3577766655554

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.58  E-value=5.8e-14  Score=118.48  Aligned_cols=169  Identities=7%  Similarity=-0.008  Sum_probs=110.5

Q ss_pred             CCeEEEeC--CCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhh------c----cCCCCeEEEEC---------
Q 043792           26 TKTVCVMD--ASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELIN------Y----NEEKKLKVFQA---------   84 (294)
Q Consensus        26 ~~~vlItG--atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~------~----~~~~~v~~~~~---------   84 (294)
                      .|..||||  ++..||+.+++.|+++|.+|.+..+..............      .    ..........+         
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence            57899999  556999999999999999999988765432222110000      0    00111223333         


Q ss_pred             -----------CCCChhHHHHHh-------ccCCEEEecCCCCCCCC--------cchhhhHhHhhHHHHHHHHHHHhc-
Q 043792           85 -----------DPFDYHSLVNAL-------KGCSGLFYSFEPPSDHS--------TYDELTAEVETMAAHNVLEACAQT-  137 (294)
Q Consensus        85 -----------Dl~~~~~~~~~~-------~~~d~Vih~a~~~~~~~--------~~~~~~~~~n~~~~~~ll~~~~~~-  137 (294)
                                 |+.+.++++.++       -++|++||+++......        ......+++|+.+...+.+++.+. 
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m  161 (329)
T d1uh5a_          82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhc
Confidence                       333443343333       36899999988654321        111378899999999999988776 


Q ss_pred             CCCcEEEEecCcceeeeCCCCCCCCCCCCCCCCCCChhhhhhccchhHhhHHHHHHHHHHHHHh----cCCeEEEEecCc
Q 043792          138 NTVDKVVFTSSLTAVVWNNHRDNPTSHDFDERNWSDVNLCKKFKLWHGLSKTLAEKTAWALAMD----RGISMVSINGGL  213 (294)
Q Consensus       138 ~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~ilrp~~  213 (294)
                      +.-.++|.+||.++...-..     .           .      ..|+.+|.+.+.+.+.++.+    +|+++.+|.||.
T Consensus       162 ~~~GsIv~iss~~~~~~~p~-----y-----------~------~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~  219 (329)
T d1uh5a_         162 KPQSSIISLTYHASQKVVPG-----Y-----------G------GGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGP  219 (329)
T ss_dssp             EEEEEEEEEECGGGTSCCTT-----C-----------T------TTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC
T ss_pred             ccccccccceeehhcccccc-----c-----------c------hhhhhhhccccccchhhHHHHhcccCcEEEEEecCc
Confidence            22358999988753221100     0           0      56999999999988887754    589999999998


Q ss_pred             eeC
Q 043792          214 VMG  216 (294)
Q Consensus       214 i~G  216 (294)
                      |-.
T Consensus       220 i~T  222 (329)
T d1uh5a_         220 LKS  222 (329)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            754

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.42  E-value=5.5e-14  Score=109.22  Aligned_cols=84  Identities=21%  Similarity=0.130  Sum_probs=72.5

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      +.++|+|+||||+|.||+.+++.|+++|++|++++|+.++.+.+.+++.   ...++.+..+|+.|.+++.+++.++|+|
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~iDil   96 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVN---KRFKVNVTAAETADDASRAEAVKGAHFV   96 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH---HHHTCCCEEEECCSHHHHHHHTTTCSEE
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHH---hccchhhhhhhcccHHHHHHHhcCcCee
Confidence            5678999999999999999999999999999999999887776666332   2235677889999999999999999999


Q ss_pred             EecCCCC
Q 043792          103 FYSFEPP  109 (294)
Q Consensus       103 ih~a~~~  109 (294)
                      ||+++..
T Consensus        97 in~Ag~g  103 (191)
T d1luaa1          97 FTAGAIG  103 (191)
T ss_dssp             EECCCTT
T ss_pred             eecCccc
Confidence            9998864

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.83  E-value=1.8e-08  Score=72.49  Aligned_cols=73  Identities=12%  Similarity=0.088  Sum_probs=62.7

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHH-hccCCEEEec
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNA-LKGCSGLFYS  105 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~Vih~  105 (294)
                      |+|+|.|+ |.+|+.+++.|.++|++|++++++++..+.+.++       -++.++.+|.+|++.+.++ ++++|.++-+
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~-------~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~   72 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE-------IDALVINGDCTKIKTLEDAGIEDADMYIAV   72 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------CSSEEEESCTTSHHHHHHTTTTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhh-------hhhhhccCcccchhhhhhcChhhhhhhccc
Confidence            79999998 9999999999999999999999998777666552       1678999999999999887 5788988886


Q ss_pred             CC
Q 043792          106 FE  107 (294)
Q Consensus       106 a~  107 (294)
                      ..
T Consensus        73 t~   74 (132)
T d1lssa_          73 TG   74 (132)
T ss_dssp             CS
T ss_pred             CC
Confidence            44

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.77  E-value=3.8e-08  Score=71.58  Aligned_cols=113  Identities=18%  Similarity=0.160  Sum_probs=79.4

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEec
Q 043792           28 TVCVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYS  105 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~  105 (294)
                      ||.|+||+|.+|++++-.|..+|  .++..++.++.+.+. .+   ........ ....- ....+..+.++++|+||..
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a-~D---l~~~~~~~-~~~~~-~~~~~~~~~~~~aDivVit   75 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA-AD---LSHIETRA-TVKGY-LGPEQLPDCLKGCDVVVIP   75 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHH-HH---HTTSSSSC-EEEEE-ESGGGHHHHHTTCSEEEEC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhh-HH---Hhhhhhhc-CCCeE-EcCCChHHHhCCCCEEEEC
Confidence            79999999999999999998887  457777765432221 12   21111111 11111 2345567788999999999


Q ss_pred             CCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEec
Q 043792          106 FEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTS  147 (294)
Q Consensus       106 a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~S  147 (294)
                      +|.+......+.+.++.|......+++.+.++ +.+-++.+-
T Consensus        76 ag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~-~p~~iiivv  116 (144)
T d1mlda1          76 AGVPRKPGMTRDDLFNTNATIVATLTAACAQH-CPDAMICII  116 (144)
T ss_dssp             CSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEEC
T ss_pred             CCcCCCCCCCcchHHHHHHHHHHHHHHHHHhc-CCCeEEEEe
Confidence            99877777777799999999999999999998 544444443

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.75  E-value=1.4e-07  Score=68.47  Aligned_cols=115  Identities=12%  Similarity=0.106  Sum_probs=79.6

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCCC--hhhHHHHHh-h-ccCCCCeEEEECCCCChhHHHHHhccCC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHGK--LQCIEEELI-N-YNEEKKLKVFQADPFDYHSLVNALKGCS  100 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~--~~~l~~~~~-~-~~~~~~v~~~~~Dl~~~~~~~~~~~~~d  100 (294)
                      |||.|+||+|.+|+.++..|+.+|  .++..++++++.  .+.+..++. . .....+++.....-.|.    +.++++|
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~----~~l~~aD   76 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENL----RIIDESD   76 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCG----GGGTTCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchH----HHhccce
Confidence            689999999999999999999988  588888887532  222211111 1 11222334322211122    2567899


Q ss_pred             EEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEe
Q 043792          101 GLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFT  146 (294)
Q Consensus       101 ~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~  146 (294)
                      +||-+||.+......+.+.++.|..-...+++.+.+. +-+.++.+
T Consensus        77 vVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~-~~~~iivV  121 (145)
T d1hyea1          77 VVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEI-CDTKIFVI  121 (145)
T ss_dssp             EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CCCEEEEC
T ss_pred             EEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhcc-CCCeEEEE
Confidence            9999999887776677799999999999999999888 54455444

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.74  E-value=5.3e-08  Score=70.97  Aligned_cols=114  Identities=8%  Similarity=0.061  Sum_probs=75.2

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCCChhhHHHHHhh-ccCCCCeEEEECCCCChhHHHHHhccCCE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELIN-YNEEKKLKVFQADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~~-~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~  101 (294)
                      ++|||.|+|+ |++|+.++..|+.+|  .++..++++++..+....++.- ........+..+|.   +    .++++|+
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~----~~~~adi   75 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---S----DCKDADL   75 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---G----GGTTCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---H----HhccccE
Confidence            4679999996 999999999999987  6899999887544332222111 11223345555654   2    3579999


Q ss_pred             EEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEec
Q 043792          102 LFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTS  147 (294)
Q Consensus       102 Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~S  147 (294)
                      ||.+++.+........+....|+.....+.+.+.+. +.+.++.+-
T Consensus        76 vvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~-~p~aivivv  120 (146)
T d1ez4a1          76 VVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDS-GFDGIFLVA  120 (146)
T ss_dssp             EEECCCC----------CHHHHHHHHHHHHHHHHHT-TCCSEEEEC
T ss_pred             EEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhc-CCCcEEEEe
Confidence            999999877665666688999999999999999988 554454443

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.63  E-value=4.8e-07  Score=65.60  Aligned_cols=112  Identities=17%  Similarity=0.093  Sum_probs=76.5

Q ss_pred             CeEEEeCCCchHHHHHHHHHHH-C--CCeEEEEecCCCChhhHHHHHhhccCCC--CeEEEECCCCChhHHHHHhccCCE
Q 043792           27 KTVCVMDASGHFASALVRRLLL-R--GYTVHAALHNHGKLQCIEEELINYNEEK--KLKVFQADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~-~--g~~V~~~~r~~~~~~~l~~~~~~~~~~~--~v~~~~~Dl~~~~~~~~~~~~~d~  101 (294)
                      |||.|+|++|.+|++++-.|.. .  ..++..++..+ ..+....+  +.....  ....+ ..-.+   + +.+++.|+
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~D--l~h~~~~~~~~~~-~~~~~---~-~~~~~aDv   72 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVD--LSHIPTAVKIKGF-SGEDA---T-PALEGADV   72 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHH--HHTSCSSCEEEEE-CSSCC---H-HHHTTCSE
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHH--HHCCccccCCcEE-EcCCC---c-cccCCCCE
Confidence            7999999999999999988754 3  47888888754 33322221  221111  12222 12222   2 35789999


Q ss_pred             EEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcE-EEEec
Q 043792          102 LFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDK-VVFTS  147 (294)
Q Consensus       102 Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~-~v~~S  147 (294)
                      ||.++|.+......+.+.+..|....+.+.+.+.+. +.+. +|.+|
T Consensus        73 vvitaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~-~p~aivivvt  118 (145)
T d2cmda1          73 VLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKT-CPKACIGIIT  118 (145)
T ss_dssp             EEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEECS
T ss_pred             EEECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhh-CCCcEEEEcc
Confidence            999999887776677799999999999999999988 4333 55544

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.60  E-value=4.4e-07  Score=66.22  Aligned_cols=117  Identities=11%  Similarity=0.105  Sum_probs=82.8

Q ss_pred             CCCCCCeEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCCChhhHHHHHhh--ccCCCCeEEEECCCCChhHHHHHhc
Q 043792           22 SSNATKTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELIN--YNEEKKLKVFQADPFDYHSLVNALK   97 (294)
Q Consensus        22 ~~~~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~~--~~~~~~v~~~~~Dl~~~~~~~~~~~   97 (294)
                      ++..++||.|+|| |.+|+.++-.|+.+|  .++..++++++..+....++..  ......+.+...|.       +.++
T Consensus         2 ~~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------~~l~   73 (148)
T d1ldna1           2 KNNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------DDCR   73 (148)
T ss_dssp             TTTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG-------GGTT
T ss_pred             CCCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH-------HHhc
Confidence            4556789999997 999999999999987  4788888876654332222211  11122344545553       2467


Q ss_pred             cCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCc-EEEEec
Q 043792           98 GCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD-KVVFTS  147 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~v~~S  147 (294)
                      ++|+||.+++.+......+.+....|......+.+.+.+. +.+ .++.+|
T Consensus        74 daDvvvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~~ivvt  123 (148)
T d1ldna1          74 DADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMAS-GFQGLFLVAT  123 (148)
T ss_dssp             TCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHH-TCCSEEEECS
T ss_pred             cceeEEEecccccccCcchhHHHHHHHHHHHHHHHHHHhh-CCCceEEEec
Confidence            8999999999887766666688999999999999999888 433 455543

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.47  E-value=2.6e-07  Score=69.73  Aligned_cols=75  Identities=15%  Similarity=0.094  Sum_probs=61.2

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEec
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYS  105 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~  105 (294)
                      .|+|+|.|| |++|+++++.|.++|++|++++|+.++.+.+..      ..........+..+.......+...|.++.+
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~------~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~   74 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSA------GVQHSTPISLDVNDDAALDAEVAKHDLVISL   74 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHT------TCTTEEEEECCTTCHHHHHHHHTTSSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHh------cccccccccccccchhhhHhhhhccceeEee
Confidence            489999998 999999999999999999999999887777655      2235566667777777788888888888866


Q ss_pred             CC
Q 043792          106 FE  107 (294)
Q Consensus       106 a~  107 (294)
                      ..
T Consensus        75 ~~   76 (182)
T d1e5qa1          75 IP   76 (182)
T ss_dssp             SC
T ss_pred             cc
Confidence            53

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=98.46  E-value=1.8e-06  Score=62.39  Aligned_cols=111  Identities=13%  Similarity=0.112  Sum_probs=72.1

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCCChhhHHHHHhhc-cCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELINY-NEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      +||.|+|+ |.+|+.++-.|+.++  .++..++++++..+....++... ..........+|   ++    .++++|+|+
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~---~~----~~~~adivv   73 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD---YS----DVKDCDVIV   73 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C---GG----GGTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc---HH----HhCCCceEE
Confidence            58999997 999999999999987  48999998877654333322111 112233333332   22    467899999


Q ss_pred             ecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcE-EEEe
Q 043792          104 YSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDK-VVFT  146 (294)
Q Consensus       104 h~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~-~v~~  146 (294)
                      -.|+..........+.+..|..-...+++.+.+. +.+- ++.+
T Consensus        74 itag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~-~p~ai~ivv  116 (142)
T d1y6ja1          74 VTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVV  116 (142)
T ss_dssp             ECCCC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEEC
T ss_pred             EecccccCcCcchhHHhhHHHHHHHHHHHHhhcc-CCCceEEEe
Confidence            9999877666666688999999999999999988 4433 4443

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=98.46  E-value=2.5e-06  Score=61.44  Aligned_cols=112  Identities=13%  Similarity=0.030  Sum_probs=77.2

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCC--ChhhHHHHHh-hccCCCCeEEEECCCCChhHHHHHhccCCE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHG--KLQCIEEELI-NYNEEKKLKVFQADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~--~~~~l~~~~~-~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~  101 (294)
                      .||.|+||+|.+|+.++-.|+.++  .++..++....  ..+....++. ........++..+|.   +    .++++|+
T Consensus         1 sKV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~----~~~~aDi   73 (142)
T d1o6za1           1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---E----DTAGSDV   73 (142)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---G----GGTTCSE
T ss_pred             CeEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---H----HhhhcCE
Confidence            389999999999999999999997  36777775322  2221111111 011223444444543   3    2579999


Q ss_pred             EEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcE-EEEe
Q 043792          102 LFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDK-VVFT  146 (294)
Q Consensus       102 Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~-~v~~  146 (294)
                      |+-.||.+......+.+.++.|..-.+.+.+.+.+. +.+. ++.+
T Consensus        74 VvitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~-~p~~i~ivv  118 (142)
T d1o6za1          74 VVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYISLTT  118 (142)
T ss_dssp             EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT-CSCCEEEEC
T ss_pred             EEEecccccccCCchhhHHHHHHHHHHHHHHHHHhc-CCCceEEEe
Confidence            999999877766677799999999999999999988 4433 4443

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.45  E-value=1.7e-07  Score=67.38  Aligned_cols=73  Identities=18%  Similarity=0.243  Sum_probs=61.1

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHH-hccCCEEEec
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNA-LKGCSGLFYS  105 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~Vih~  105 (294)
                      |+++|.|+ |-+|+++++.|.++|++|++++.+++..+.+..        .....+.+|.++++.+.++ +.++|.||-+
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~--------~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~   71 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS--------YATHAVIANATEENELLSLGIRNFEYVIVA   71 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTT--------TCSEEEECCTTCTTHHHHHTGGGCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHH--------hCCcceeeecccchhhhccCCccccEEEEE
Confidence            57899988 999999999999999999999998766555433        3567889999999999887 7889988877


Q ss_pred             CCC
Q 043792          106 FEP  108 (294)
Q Consensus       106 a~~  108 (294)
                      .+.
T Consensus        72 ~~~   74 (134)
T d2hmva1          72 IGA   74 (134)
T ss_dssp             CCS
T ss_pred             cCc
Confidence            663

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=98.44  E-value=4.5e-06  Score=61.06  Aligned_cols=118  Identities=11%  Similarity=0.028  Sum_probs=78.6

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCChhhHHHHHhhc--cCCCCeEEEECCCCChhHHHHHhccC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEEELINY--NEEKKLKVFQADPFDYHSLVNALKGC   99 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~--~~~~~v~~~~~Dl~~~~~~~~~~~~~   99 (294)
                      ..+++||.|+|+ |.+|+.++-.|..++ .++..++.+++..+.....+...  ...........     ...++.++++
T Consensus         4 ~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~-----~~~~~~~~~a   77 (154)
T d1pzga1           4 VQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE-----YSYEAALTGA   77 (154)
T ss_dssp             CSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE-----CSHHHHHTTC
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc-----CchhhhhcCC
Confidence            445689999998 999999998888877 47888888776554433221110  00111111111     2245677899


Q ss_pred             CEEEecCCCCCCCCc-----chhhhHhHhhHHHHHHHHHHHhcCCCcEEEEec
Q 043792          100 SGLFYSFEPPSDHST-----YDELTAEVETMAAHNVLEACAQTNTVDKVVFTS  147 (294)
Q Consensus       100 d~Vih~a~~~~~~~~-----~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~S  147 (294)
                      |+|+-+++.......     ...+.+..|......+++.+.+. +.+-++.+-
T Consensus        78 diVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~-~p~aiviiv  129 (154)
T d1pzga1          78 DCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKY-CPKTFIIVV  129 (154)
T ss_dssp             SEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEEC
T ss_pred             CeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhc-CCCcEEEEe
Confidence            999999987654432     33478899999999999999888 544454443

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=98.43  E-value=1.3e-06  Score=64.19  Aligned_cols=118  Identities=16%  Similarity=0.069  Sum_probs=74.7

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCC----e-E-EEEecCCCChhhHHHHHh-h-ccCCCCeEEEECCCCChhHHHHHhc
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGY----T-V-HAALHNHGKLQCIEEELI-N-YNEEKKLKVFQADPFDYHSLVNALK   97 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~----~-V-~~~~r~~~~~~~l~~~~~-~-~~~~~~v~~~~~Dl~~~~~~~~~~~   97 (294)
                      .+||.|+||+|++|++++-.|+..+.    + + .-+.......+.+..... . .........+...    ....+.++
T Consensus         4 p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~   79 (154)
T d1y7ta1           4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEAT----DDPKVAFK   79 (154)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE----SCHHHHTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccC----Cchhhhcc
Confidence            46999999999999999999988652    1 1 111112222222211100 1 1111233333332    22446788


Q ss_pred             cCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEec
Q 043792           98 GCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQT-NTVDKVVFTS  147 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~S  147 (294)
                      ++|+||-++|........+.+.+..|+.....+.+.+.+. +.--.++.+|
T Consensus        80 ~advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          80 DADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             cccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence            9999999999988777777799999999999999999886 2112454554

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.39  E-value=2.6e-06  Score=61.36  Aligned_cols=111  Identities=13%  Similarity=0.164  Sum_probs=78.3

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCCChhhHHHHHhh-ccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELIN-YNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~~-~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      |||.|+|+ |.+|+.++-.|+.++  .++..+++++++.+....++.. ...........+|.   +    .++++|+||
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~---~----~~~~adivv   72 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY---A----DLKGSDVVI   72 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG---G----GGTTCSEEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcH---H----HhcCCCEEE
Confidence            68999997 999999999998876  5788888876544332221111 11123444444432   2    367899999


Q ss_pred             ecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEe
Q 043792          104 YSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFT  146 (294)
Q Consensus       104 h~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~  146 (294)
                      -+++..........+.+..|..-...+.+.+.+. +.+-++.+
T Consensus        73 itag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~-~p~aiviv  114 (140)
T d1a5za1          73 VAAGVPQKPGETRLQLLGRNARVMKEIARNVSKY-APDSIVIV  114 (140)
T ss_dssp             ECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEE
T ss_pred             EecccccCCCcchhhhhccccchHHHHHHHHHhc-CCCcEEEE
Confidence            9999887776667788999999999999999988 44444443

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=98.38  E-value=1.8e-06  Score=62.50  Aligned_cols=111  Identities=13%  Similarity=0.051  Sum_probs=78.0

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCCChhhHHHHHhhc--cCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELINY--NEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~~~--~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      |||.|+|| |.+|+.++..|+.+|  .++..++++++..+.....+...  ......++...  .+.+    .++++|+|
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~----~~~dadvv   73 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYA----DTANSDIV   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGG----GGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHH----HhcCCeEE
Confidence            68999997 999999999999987  68999898876554322211010  01123334322  2222    46799999


Q ss_pred             EecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEE
Q 043792          103 FYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVF  145 (294)
Q Consensus       103 ih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~  145 (294)
                      +-++|.+........+.++.|..-...+.+.+.+. +.+-++.
T Consensus        74 vitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~-~p~aivi  115 (142)
T d1guza1          74 IITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKH-SKNPIII  115 (142)
T ss_dssp             EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CSSCEEE
T ss_pred             EEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhcc-CCCeEEE
Confidence            99999887776677788999999999999999888 4333443

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=98.31  E-value=8.5e-07  Score=66.41  Aligned_cols=116  Identities=11%  Similarity=0.026  Sum_probs=75.5

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCC-----C--eEEEEecCCCC--hhhHHHHHhhccCCCCeEEE-ECCCCChhHHHHH
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRG-----Y--TVHAALHNHGK--LQCIEEELINYNEEKKLKVF-QADPFDYHSLVNA   95 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g-----~--~V~~~~r~~~~--~~~l~~~~~~~~~~~~v~~~-~~Dl~~~~~~~~~   95 (294)
                      ..||.||||+|.||++++-.|++.+     .  .+..++.....  .+.+..++ .......+..+ .++     +..+.
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl-~d~a~~~~~~~~~~~-----~~~~~   97 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMEL-EDSLYPLLREVSIGI-----DPYEV   97 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHH-HTTTCTTEEEEEEES-----CHHHH
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhh-cccccccccCccccc-----cchhh
Confidence            4589999999999999999998742     2  23333333211  12222111 11111222222 222     24567


Q ss_pred             hccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhc-CCCcEEEEec
Q 043792           96 LKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQT-NTVDKVVFTS  147 (294)
Q Consensus        96 ~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~v~~S  147 (294)
                      ++++|+||-.++.+......+.+.+..|......+.+++.+. +.--+++.+|
T Consensus        98 ~~~aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1          98 FEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             TTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ccCCceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence            889999999999988888888899999999999999999886 2222455554

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=98.28  E-value=1.2e-05  Score=58.87  Aligned_cols=116  Identities=9%  Similarity=0.004  Sum_probs=80.3

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCC--eEEEEecCCCChhhHHHHHhh-c-cCCCCeEEEECCCCChhHHHHHhcc
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGY--TVHAALHNHGKLQCIEEELIN-Y-NEEKKLKVFQADPFDYHSLVNALKG   98 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~~~~~~-~-~~~~~v~~~~~Dl~~~~~~~~~~~~   98 (294)
                      ..+.+||.|+|+ |.+|+.++-.|..+|.  ++..++++++.......++.- . ..........+|.   +    .+++
T Consensus        17 ~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~---~----~~~~   88 (160)
T d1i0za1          17 TVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDY---S----VTAN   88 (160)
T ss_dssp             CCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSG---G----GGTT
T ss_pred             cCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccch---h----hccc
Confidence            344679999997 9999999999999984  788888876554332221111 1 1112222223333   2    3678


Q ss_pred             CCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcE-EEEec
Q 043792           99 CSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDK-VVFTS  147 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~-~v~~S  147 (294)
                      +|+||..|+........+.+.++.|....+.++..+.+. +.+- ++.+|
T Consensus        89 adiVVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~-~p~aiiivvt  137 (160)
T d1i0za1          89 SKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKY-SPDCIIIVVS  137 (160)
T ss_dssp             CSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECS
T ss_pred             ccEEEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEeC
Confidence            999999999887766667788999999999999999888 5443 44444

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.27  E-value=3.5e-06  Score=60.71  Aligned_cols=111  Identities=13%  Similarity=0.025  Sum_probs=76.9

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCCChhhHHHHHh-hc-cCCCCeEEEE-CCCCChhHHHHHhccCCE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELI-NY-NEEKKLKVFQ-ADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~-~~-~~~~~v~~~~-~Dl~~~~~~~~~~~~~d~  101 (294)
                      |||.|+|+ |.+|++++-.|+.+|  .++..++++++..+....++. .. ......++.. .|.   +    .++++|+
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~---~----~~~~adi   72 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY---S----LLKGSEI   72 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG---G----GGTTCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH---H----HhccccE
Confidence            78999997 999999999999887  568888887655433211111 00 0111223332 333   2    5678999


Q ss_pred             EEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEe
Q 043792          102 LFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFT  146 (294)
Q Consensus       102 Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~  146 (294)
                      ||-.++.+........+....|..-...+.+.+.+. +.+.++.+
T Consensus        73 Vvitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~-~p~aiviv  116 (142)
T d1ojua1          73 IVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILV  116 (142)
T ss_dssp             EEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEE
T ss_pred             EEEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhh-CCCcEEEE
Confidence            999999877766667788999999999999999888 44444443

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=98.23  E-value=8.7e-06  Score=58.63  Aligned_cols=113  Identities=9%  Similarity=0.065  Sum_probs=78.1

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCCChhhHHHHHh-hccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELI-NYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~-~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      .||.|+|+ |.+|++++-.|+.+|  .++..++++++..+....++. .........+...+  +.+    .++++|+||
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~~~----~~~daDvVV   74 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD--DPE----ICRDADMVV   74 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES--CGG----GGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC--CHH----HhhCCcEEE
Confidence            47999997 999999999999987  478888887655432211111 11112233333322  222    367899999


Q ss_pred             ecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcE-EEEec
Q 043792          104 YSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDK-VVFTS  147 (294)
Q Consensus       104 h~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~-~v~~S  147 (294)
                      -.+|.+......+.+.+..|..-...+++.+.+. +.+. ++.+|
T Consensus        75 itaG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~-~p~ai~ivvt  118 (143)
T d1llda1          75 ITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYMLIT  118 (143)
T ss_dssp             ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECC
T ss_pred             EecccccCCCCchhhhhhhhHHHHHHHHHHHHhh-CCCeEEEEeC
Confidence            9999988776777789999999999999999888 4433 44443

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.17  E-value=1.2e-05  Score=58.77  Aligned_cols=107  Identities=15%  Similarity=-0.056  Sum_probs=69.3

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCC-----Ce--EEEEecCCCC--hhhHHHHHhhccCCCCeEEEECCCCChhHHHHHh
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRG-----YT--VHAALHNHGK--LQCIEEELINYNEEKKLKVFQADPFDYHSLVNAL   96 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g-----~~--V~~~~r~~~~--~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~   96 (294)
                      .+||.|+||+|.+|++++-.|+..+     ..  +..++.+...  .+.+..++ ..........+..-    ....+.+
T Consensus         3 p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~----~~~~~~~   77 (154)
T d5mdha1           3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMEL-QDCALPLLKDVIAT----DKEEIAF   77 (154)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHH-HHTCCTTEEEEEEE----SCHHHHT
T ss_pred             ceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhh-cccccccccccccC----ccccccc
Confidence            4799999999999999999998653     12  3333322211  12221110 00111222222221    1244577


Q ss_pred             ccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhc
Q 043792           97 KGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQT  137 (294)
Q Consensus        97 ~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~  137 (294)
                      +++|+||-+++.+......+.+.++.|..-.+.+.+.+.+.
T Consensus        78 ~~~dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~  118 (154)
T d5mdha1          78 KDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKY  118 (154)
T ss_dssp             TTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHH
T ss_pred             CCceEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhh
Confidence            89999999999988777777788999999999999998775

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=98.15  E-value=4.5e-06  Score=62.91  Aligned_cols=80  Identities=19%  Similarity=0.115  Sum_probs=54.2

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEecC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSF  106 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~a  106 (294)
                      |||.|+|+ |.+|..++..|.++|++|.+++|+++..+.+...-......+..+..........++.+.++++|+||-+.
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~v   80 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVV   80 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECS
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEEE
Confidence            79999998 99999999999999999999999876666555410000111111122222212234678889999999875


Q ss_pred             C
Q 043792          107 E  107 (294)
Q Consensus       107 ~  107 (294)
                      .
T Consensus        81 ~   81 (184)
T d1bg6a2          81 P   81 (184)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.14  E-value=7.8e-07  Score=68.04  Aligned_cols=43  Identities=19%  Similarity=0.280  Sum_probs=38.8

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHH
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEE   69 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~   69 (294)
                      |||.|+||+|.+|+.|++.|+++|++|.+.+|++++.+.+.++
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~   43 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence            6899999999999999999999999999999998877776664

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=98.12  E-value=5.9e-06  Score=59.56  Aligned_cols=111  Identities=14%  Similarity=0.092  Sum_probs=69.8

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCChhhHHHHHhhc--cCCCCeEEE-ECCCCChhHHHHHhccCCEE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEEELINY--NEEKKLKVF-QADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~--~~~~~v~~~-~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      +||.|+|+ |.+|+.++-.|+.++ .++..++.+++........+...  ......++. ..|.   +    .++++|+|
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~---~----~~~~advv   73 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY---A----DTANSDVI   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG---G----GGTTCSEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcH---H----HhcCCCEE
Confidence            68999997 999999999998877 47888888776544332221100  001122232 2332   2    35689999


Q ss_pred             EecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEe
Q 043792          103 FYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFT  146 (294)
Q Consensus       103 ih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~  146 (294)
                      |-+|+.+........+.+..|......+++.+.+. +.+-++.+
T Consensus        74 vitag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~-~p~aiviv  116 (142)
T d1uxja1          74 VVTSGAPRKPGMSREDLIKVNADITRACISQAAPL-SPNAVIIM  116 (142)
T ss_dssp             EECCSCC---------CHHHHHHHHHHHHHHHGGG-CTTCEEEE
T ss_pred             EEeeeccCCcCcchhHHHhHHHHHHHHHHHHHhcc-CCCceEEE
Confidence            99999877655556688899999999999999988 44444443

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=98.11  E-value=2.1e-05  Score=57.33  Aligned_cols=80  Identities=8%  Similarity=-0.014  Sum_probs=53.1

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHH-HHhc---c
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLV-NALK---G   98 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~-~~~~---~   98 (294)
                      +..++||.|+||.|.+|+.+++.|.+.||+|.+++|+.........      .....-+...++.....+. +...   .
T Consensus         6 ~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~------~~~~~v~~~~~~~~~~~v~~~~~~~~~~   79 (152)
T d2pv7a2           6 NSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESIL------ANADVVIVSVPINLTLETIERLKPYLTE   79 (152)
T ss_dssp             CTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHH------TTCSEEEECSCGGGHHHHHHHHGGGCCT
T ss_pred             CCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhh------hhccccccccchhhheeeeecccccccC
Confidence            4567899999999999999999999999999999998765443222      1223444444443332222 2222   2


Q ss_pred             CCEEEecCCC
Q 043792           99 CSGLFYSFEP  108 (294)
Q Consensus        99 ~d~Vih~a~~  108 (294)
                      -.+|+++.+.
T Consensus        80 ~~iiiD~~Sv   89 (152)
T d2pv7a2          80 NMLLADLTSV   89 (152)
T ss_dssp             TSEEEECCSC
T ss_pred             CceEEEeccc
Confidence            3577777764

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.10  E-value=1e-05  Score=59.28  Aligned_cols=116  Identities=13%  Similarity=0.078  Sum_probs=78.1

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCCChhhHHHHHh-hccC-CCCeEEEECCCCChhHHHHHhcc
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELI-NYNE-EKKLKVFQADPFDYHSLVNALKG   98 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~-~~~~-~~~v~~~~~Dl~~~~~~~~~~~~   98 (294)
                      ..+..||.|+|+ |.+|++++-.|..+|  .++..++++++.......++. .... .........|.   +    .+++
T Consensus        16 ~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~---~----~~~~   87 (159)
T d2ldxa1          16 KLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY---N----VSAN   87 (159)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG---G----GGTT
T ss_pred             cCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch---h----hhcc
Confidence            344568999997 999999999999987  478888887655433222211 1111 11222333333   2    3568


Q ss_pred             CCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCc-EEEEec
Q 043792           99 CSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD-KVVFTS  147 (294)
Q Consensus        99 ~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~v~~S  147 (294)
                      +|+||-.|+.+......+.+.++.|+.....+...+.+. +.+ .++.+|
T Consensus        88 adivvitag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~-~p~~ivivvt  136 (159)
T d2ldxa1          88 SKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQN-SPDCKIIVVT  136 (159)
T ss_dssp             EEEEEECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHH-STTCEEEECS
T ss_pred             ccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhcc-CCCeEEEEeC
Confidence            999999999877766666688999999999999888877 433 344444

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=98.10  E-value=1.3e-05  Score=57.83  Aligned_cols=110  Identities=12%  Similarity=0.088  Sum_probs=71.9

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCCChhhHHHHHh-h-ccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHGKLQCIEEELI-N-YNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~-~-~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      +||.|+|+ |.+|+.++-.|+.+|  .++..+++++++.+....++. . ............|.   +    .++++|+|
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~---~----~l~~adiV   73 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW---A----ALADADVV   73 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG---G----GGTTCSEE
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCH---H----HhccccEE
Confidence            78999996 999999999999987  578888887655432222111 1 11122334444443   2    35789999


Q ss_pred             EecCCCCCCC----CcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEE
Q 043792          103 FYSFEPPSDH----STYDELTAEVETMAAHNVLEACAQTNTVDKVVF  145 (294)
Q Consensus       103 ih~a~~~~~~----~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~  145 (294)
                      |-+||.....    ...+.+.++.|......+.+.+.+. +.+-++.
T Consensus        74 VitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~-~p~aivi  119 (146)
T d1hyha1          74 ISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKES-GFHGVLV  119 (146)
T ss_dssp             EECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHT-TCCSEEE
T ss_pred             EEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhc-CCCeEEE
Confidence            9999865422    1223367889999999999999888 4444443

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.09  E-value=9.4e-06  Score=58.59  Aligned_cols=70  Identities=16%  Similarity=0.049  Sum_probs=43.2

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCC----CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRG----YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~  101 (294)
                      |+||.|.||||++|+.+++.|+++.    .+++.+.++.........      .....  ...++.+.+    .++++|+
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~------~~~~~--~~~~~~~~~----~~~~~Di   68 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSF------GGTTG--TLQDAFDLE----ALKALDI   68 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGG------GTCCC--BCEETTCHH----HHHTCSE
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccc------cCCce--eeecccchh----hhhcCcE
Confidence            5799999999999999999888763    456666655433211111      01111  111222322    3578999


Q ss_pred             EEecCC
Q 043792          102 LFYSFE  107 (294)
Q Consensus       102 Vih~a~  107 (294)
                      +|.+++
T Consensus        69 vF~a~~   74 (146)
T d1t4ba1          69 IVTCQG   74 (146)
T ss_dssp             EEECSC
T ss_pred             EEEecC
Confidence            999986

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.07  E-value=1.6e-05  Score=57.61  Aligned_cols=113  Identities=6%  Similarity=0.019  Sum_probs=74.2

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCChhhHHHHHhhc--cCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEEELINY--NEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~--~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ++||.|+|+ |.+|++++..|..++ .++..++++++..+....++...  ....+..+...+  +.    +.++++|+|
T Consensus         3 ~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~----~~~~~advv   75 (150)
T d1t2da1           3 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TY----DDLAGADVV   75 (150)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CG----GGGTTCSEE
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cc----cccCCCcEE
Confidence            469999996 999999998887776 57888888776654433221110  011222333222  22    245789999


Q ss_pred             EecCCCCCCCCc-----chhhhHhHhhHHHHHHHHHHHhcCCCcEEEEe
Q 043792          103 FYSFEPPSDHST-----YDELTAEVETMAAHNVLEACAQTNTVDKVVFT  146 (294)
Q Consensus       103 ih~a~~~~~~~~-----~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~  146 (294)
                      |-+++.......     .+.+.+..|......+.+.+.+. +.+-++.+
T Consensus        76 vitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~-~p~aiviv  123 (150)
T d1t2da1          76 IVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKN-CPNAFIIV  123 (150)
T ss_dssp             EECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEE
T ss_pred             EEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhc-CCCeEEEE
Confidence            999987554322     24478999999999999999988 54444443

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=98.05  E-value=1.4e-05  Score=58.45  Aligned_cols=76  Identities=17%  Similarity=0.108  Sum_probs=60.7

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHH-hccCCEEEec
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNA-LKGCSGLFYS  105 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~Vih~  105 (294)
                      -+|+|.|. |-+|..+++.|.++|++|++++.+++......+.+    ...++.++.+|.+|++.|+++ +++++.||-+
T Consensus         4 nHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~----~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~   78 (153)
T d1id1a_           4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQR----LGDNADVIPGDSNDSSVLKKAGIDRCRAILAL   78 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHH----HCTTCEEEESCTTSHHHHHHHTTTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHh----hcCCcEEEEccCcchHHHHHhccccCCEEEEc
Confidence            47999998 89999999999999999999998876543333211    124799999999999988766 5678999887


Q ss_pred             CC
Q 043792          106 FE  107 (294)
Q Consensus       106 a~  107 (294)
                      ..
T Consensus        79 ~~   80 (153)
T d1id1a_          79 SD   80 (153)
T ss_dssp             SS
T ss_pred             cc
Confidence            64

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.98  E-value=8e-06  Score=60.95  Aligned_cols=76  Identities=20%  Similarity=0.058  Sum_probs=55.0

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      -.++.+|+|+||+|.+|...+..+...|.+|+++++++++.+.+++   .     +.+.+ .|..+.......-.++|+|
T Consensus        25 ~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~---l-----Ga~~~-i~~~~~~~~~~~~~g~D~v   95 (171)
T d1iz0a2          25 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA---L-----GAEEA-ATYAEVPERAKAWGGLDLV   95 (171)
T ss_dssp             CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH---T-----TCSEE-EEGGGHHHHHHHTTSEEEE
T ss_pred             CCCCCEEEEEeccccchhhhhhhhcccccccccccccccccccccc---c-----cccee-eehhhhhhhhhcccccccc
Confidence            3467899999999999999999999999999999998777666665   3     23222 1333322222333578999


Q ss_pred             EecCC
Q 043792          103 FYSFE  107 (294)
Q Consensus       103 ih~a~  107 (294)
                      |++.|
T Consensus        96 ~d~~G  100 (171)
T d1iz0a2          96 LEVRG  100 (171)
T ss_dssp             EECSC
T ss_pred             ccccc
Confidence            99876

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.96  E-value=2.3e-05  Score=59.01  Aligned_cols=85  Identities=16%  Similarity=0.086  Sum_probs=62.6

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~  101 (294)
                      ..++++|+|+|+ |..|+.++..|.+.|. +++++.|+.+..+++..........-.......++.+.+.+.+.+.++|.
T Consensus        15 ~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di   93 (182)
T d1vi2a1          15 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADI   93 (182)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhcccce
Confidence            346789999998 8889999999999985 68888998877665433110111112344557788888999999999999


Q ss_pred             EEecCCC
Q 043792          102 LFYSFEP  108 (294)
Q Consensus       102 Vih~a~~  108 (294)
                      |||+-..
T Consensus        94 iIN~Tp~  100 (182)
T d1vi2a1          94 LTNGTKV  100 (182)
T ss_dssp             EEECSST
T ss_pred             eccccCC
Confidence            9999543

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.96  E-value=1.6e-05  Score=58.85  Aligned_cols=65  Identities=15%  Similarity=0.167  Sum_probs=46.8

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEecC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSF  106 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~a  106 (294)
                      |||.|+|. |.+|+.+++.|.++|++|++++|+++..+...+   .    ..+.....+       .+.++++|+||-+.
T Consensus         1 MkI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~---~----~~~~~~~~~-------~~~~~~~DiIilav   65 (165)
T d2f1ka2           1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVE---R----QLVDEAGQD-------LSLLQTAKIIFLCT   65 (165)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH---T----TSCSEEESC-------GGGGTTCSEEEECS
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHH---h----hccceeeee-------cccccccccccccC
Confidence            68999987 999999999999999999999998765555444   2    111111111       13567899988655

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.95  E-value=3.6e-05  Score=50.99  Aligned_cols=75  Identities=13%  Similarity=0.023  Sum_probs=52.6

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ..++++|+|.|. |-.|..+++.|.++|++|++.+.+......  .     .......++.+.. +.    ..+.++|.|
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~--~-----~~~~~~~~~~~~~-~~----~~~~~~d~v   68 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGL--D-----KLPEAVERHTGSL-ND----EWLMAADLI   68 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTG--G-----GSCTTSCEEESBC-CH----HHHHHCSEE
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhH--H-----HHhhccceeeccc-ch----hhhccCCEE
Confidence            456889999998 889999999999999999999986543221  0     1112444554443 22    235678999


Q ss_pred             EecCCCCC
Q 043792          103 FYSFEPPS  110 (294)
Q Consensus       103 ih~a~~~~  110 (294)
                      |-..|.+.
T Consensus        69 i~SPGi~~   76 (93)
T d2jfga1          69 VASPGIAL   76 (93)
T ss_dssp             EECTTSCT
T ss_pred             EECCCCCC
Confidence            99887654

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.95  E-value=1.2e-05  Score=59.17  Aligned_cols=75  Identities=23%  Similarity=0.281  Sum_probs=58.7

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~  101 (294)
                      ...+++|||+|+ |-+|+.+++.|...|. ++++..|+.++...+..++       +...     .+.+++.+.+.++|+
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~-------~~~~-----~~~~~~~~~l~~~Di   87 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL-------GGEA-----VRFDELVDHLARSDV   87 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH-------TCEE-----CCGGGHHHHHHTCSE
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhh-------hccc-----ccchhHHHHhccCCE
Confidence            346789999998 9999999999999997 6888899877777766632       2222     244678888899999


Q ss_pred             EEecCCCCC
Q 043792          102 LFYSFEPPS  110 (294)
Q Consensus       102 Vih~a~~~~  110 (294)
                      ||.+.+...
T Consensus        88 vi~atss~~   96 (159)
T d1gpja2          88 VVSATAAPH   96 (159)
T ss_dssp             EEECCSSSS
T ss_pred             EEEecCCCC
Confidence            999977544

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.95  E-value=1.4e-05  Score=59.73  Aligned_cols=98  Identities=19%  Similarity=0.134  Sum_probs=65.1

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCCh-hHHHHHh--ccCC
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDY-HSLVNAL--KGCS  100 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~-~~~~~~~--~~~d  100 (294)
                      ..+.+|||+||+|.+|+..++.+...|.+|++.++++++.+..+.   .     +.+.+. |..+. ++.....  +++|
T Consensus        30 ~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~---l-----Ga~~vi-~~~~~~~~~~~~~~~~gvD  100 (176)
T d1xa0a2          30 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV---L-----GAKEVL-AREDVMAERIRPLDKQRWA  100 (176)
T ss_dssp             GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH---T-----TCSEEE-ECC---------CCSCCEE
T ss_pred             CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHh---c-----ccceee-ecchhHHHHHHHhhccCcC
Confidence            346789999999999999999999999999999999988877766   3     222111 22111 1122222  2589


Q ss_pred             EEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792          101 GLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus       101 ~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      +||.+.+...                ....++.++..   .|++.++..
T Consensus       101 ~vid~vgg~~----------------~~~~l~~l~~~---Griv~~G~~  130 (176)
T d1xa0a2         101 AAVDPVGGRT----------------LATVLSRMRYG---GAVAVSGLT  130 (176)
T ss_dssp             EEEECSTTTT----------------HHHHHHTEEEE---EEEEECSCC
T ss_pred             EEEEcCCchh----------------HHHHHHHhCCC---ceEEEeecc
Confidence            9999988543                22344444444   488887765

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.94  E-value=4.2e-06  Score=64.32  Aligned_cols=75  Identities=16%  Similarity=0.163  Sum_probs=51.7

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCC-------------CChhHHH
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADP-------------FDYHSLV   93 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl-------------~~~~~~~   93 (294)
                      |||.|.|. |++|..++..|++.|++|++++.+.+..+.+...        ...+.+.++             .-..++.
T Consensus         1 MkI~ViGl-G~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~g--------~~p~~e~~~~~~l~~~~~~~~~~~~~~~~   71 (202)
T d1mv8a2           1 MRISIFGL-GYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQG--------KSPIVEPGLEALLQQGRQTGRLSGTTDFK   71 (202)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT--------CCSSCCTTHHHHHHHHHHTTCEEEESCHH
T ss_pred             CEEEEECC-CHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhccc--------CCcccchhhhhhhhhhhcccccccCCCHH
Confidence            78999986 9999999999999999999999876555544330        111111110             1112355


Q ss_pred             HHhccCCEEEecCCCCC
Q 043792           94 NALKGCSGLFYSFEPPS  110 (294)
Q Consensus        94 ~~~~~~d~Vih~a~~~~  110 (294)
                      ++++++|++|.|...+.
T Consensus        72 ~~i~~~d~i~i~VpTP~   88 (202)
T d1mv8a2          72 KAVLDSDVSFICVGTPS   88 (202)
T ss_dssp             HHHHTCSEEEECCCCCB
T ss_pred             HHHhhCCEEEEecCccc
Confidence            66778999999987654

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.92  E-value=3e-05  Score=53.04  Aligned_cols=69  Identities=12%  Similarity=0.035  Sum_probs=55.6

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCCEE
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCSGL  102 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~V  102 (294)
                      ..+||.|.|| |.+|+-++....+.|++|++++.+++......          .-.++.+|+.|.+.+.++..  ++|+|
T Consensus        10 ~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~~v----------a~~~i~~~~~d~~~l~~~~~~~~~Dvi   78 (111)
T d1kjqa2          10 AATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAMHV----------AHRSHVINMLDGDALRRVVELEKPHYI   78 (111)
T ss_dssp             TCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG----------SSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchhhc----------CCeEEECCCCCHHHHHHHHHhhCCceE
Confidence            3568999997 99999999999999999999998876533211          23688899999999998875  46888


Q ss_pred             Ee
Q 043792          103 FY  104 (294)
Q Consensus       103 ih  104 (294)
                      -.
T Consensus        79 T~   80 (111)
T d1kjqa2          79 VP   80 (111)
T ss_dssp             EE
T ss_pred             EE
Confidence            53

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.91  E-value=7.8e-06  Score=51.92  Aligned_cols=45  Identities=24%  Similarity=0.251  Sum_probs=40.3

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHH
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEE   68 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~   68 (294)
                      .++++|||+||+|.+|+..+..+...|.+|+++++++++.+.+++
T Consensus        30 ~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~~   74 (77)
T d1o8ca2          30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKS   74 (77)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH
T ss_pred             cCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHHH
Confidence            356799999999999999999999999999999999888777665

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.90  E-value=2e-05  Score=59.31  Aligned_cols=78  Identities=17%  Similarity=0.139  Sum_probs=55.9

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCCE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCSG  101 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~  101 (294)
                      .++.+|||+||+|.+|+.+++.....|.+|+++++++++.+.+++   .   ....-+..-|-...+.+.+...  ++|+
T Consensus        28 ~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~---~---Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~  101 (182)
T d1v3va2          28 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ---I---GFDAAFNYKTVNSLEEALKKASPDGYDC  101 (182)
T ss_dssp             CSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---T---TCSEEEETTSCSCHHHHHHHHCTTCEEE
T ss_pred             CCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHh---h---hhhhhcccccccHHHHHHHHhhcCCCce
Confidence            467899999999999999999999999999999998776666665   3   1121122233333344443433  5899


Q ss_pred             EEecCC
Q 043792          102 LFYSFE  107 (294)
Q Consensus       102 Vih~a~  107 (294)
                      ||++.+
T Consensus       102 v~D~vG  107 (182)
T d1v3va2         102 YFDNVG  107 (182)
T ss_dssp             EEESSC
T ss_pred             eEEecC
Confidence            999987

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=1.2e-05  Score=60.11  Aligned_cols=99  Identities=13%  Similarity=0.085  Sum_probs=65.2

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChh---HHHHHhc--
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYH---SLVNALK--   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~---~~~~~~~--   97 (294)
                      ..++.+|||+||+|.+|...++.+...|.+|+++++++++.+.+++   .     +.+.+ .|..+.+   .+.+...  
T Consensus        26 ~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~---~-----Ga~~v-i~~~~~~~~~~i~~~t~~~   96 (174)
T d1yb5a2          26 VKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ---N-----GAHEV-FNHREVNYIDKIKKYVGEK   96 (174)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---T-----TCSEE-EETTSTTHHHHHHHHHCTT
T ss_pred             CCCCCEEEEEeccccccccccccccccCcccccccccccccccccc---c-----Ccccc-cccccccHHHHhhhhhccC
Confidence            3457899999999999999999999999999999987655555544   3     22222 2444433   2333332  


Q ss_pred             cCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792           98 GCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      ++|+||.+.+..                .....++.+++.   .++|.++..
T Consensus        97 g~d~v~d~~g~~----------------~~~~~~~~l~~~---G~iv~~G~~  129 (174)
T d1yb5a2          97 GIDIIIEMLANV----------------NLSKDLSLLSHG---GRVIVVGSR  129 (174)
T ss_dssp             CEEEEEESCHHH----------------HHHHHHHHEEEE---EEEEECCCC
T ss_pred             CceEEeecccHH----------------HHHHHHhccCCC---CEEEEEecC
Confidence            479999987621                123345555544   478887643

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.75  E-value=1.8e-05  Score=59.26  Aligned_cols=76  Identities=9%  Similarity=-0.031  Sum_probs=56.4

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChh---HHHHHhc--c
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYH---SLVNALK--G   98 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~---~~~~~~~--~   98 (294)
                      .++.+|+|+||+|.+|..+++.+...|.+|+++++++++.+.+++   +     +.+.+ .|..+++   .+.++-.  +
T Consensus        27 ~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~---l-----Ga~~v-i~~~~~d~~~~v~~~t~g~g   97 (179)
T d1qora2          27 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK---A-----GAWQV-INYREEDLVERLKEITGGKK   97 (179)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH---H-----TCSEE-EETTTSCHHHHHHHHTTTCC
T ss_pred             CCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHh---c-----CCeEE-EECCCCCHHHHHHHHhCCCC
Confidence            456899999999999999999999999999999999888777666   3     33322 2444433   3333332  4


Q ss_pred             CCEEEecCCC
Q 043792           99 CSGLFYSFEP  108 (294)
Q Consensus        99 ~d~Vih~a~~  108 (294)
                      +|+|+.+.+.
T Consensus        98 ~d~v~d~~g~  107 (179)
T d1qora2          98 VRVVYDSVGR  107 (179)
T ss_dssp             EEEEEECSCG
T ss_pred             eEEEEeCccH
Confidence            7999999874

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.73  E-value=1.8e-05  Score=58.38  Aligned_cols=67  Identities=15%  Similarity=0.230  Sum_probs=52.1

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEec
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYS  105 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~  105 (294)
                      |+||.++|- |.+|+.+++.|+++||+|.+.+|++++.+.+..   .     ..       ....+..++++.+|+|+-+
T Consensus         1 M~kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~---~-----~~-------~~~~~~~e~~~~~diii~~   64 (162)
T d3cuma2           1 MKQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVA---A-----GA-------SAARSARDAVQGADVVISM   64 (162)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHHHHHHHH---T-----TC-------EECSSHHHHHTSCSEEEEC
T ss_pred             CCEEEEEEE-HHHHHHHHHHHHHCCCeEEEEECchhhhhhhhh---h-----hc-------cccchhhhhccccCeeeec
Confidence            578999986 999999999999999999999998777666555   2     11       1112456778889999988


Q ss_pred             CCC
Q 043792          106 FEP  108 (294)
Q Consensus       106 a~~  108 (294)
                      ...
T Consensus        65 v~~   67 (162)
T d3cuma2          65 LPA   67 (162)
T ss_dssp             CSC
T ss_pred             ccc
Confidence            753

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=97.73  E-value=6.2e-05  Score=54.72  Aligned_cols=65  Identities=18%  Similarity=0.220  Sum_probs=48.3

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEecC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSF  106 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~a  106 (294)
                      |||.|+|. |.+|+.+++.|+++|++|++.++++++......   .     ++.+.       +...++++++|.||-+.
T Consensus         1 MkIgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~---~-----~~~~~-------~~~~e~~~~~diIi~~v   64 (152)
T d1i36a2           1 LRVGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSPSTIERA---R-----TVGVT-------ETSEEDVYSCPVVISAV   64 (152)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHH---H-----HHTCE-------ECCHHHHHTSSEEEECS
T ss_pred             CEEEEEcH-HHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhh---h-----ccccc-------ccHHHHHhhcCeEEEEe
Confidence            68999986 999999999999999999998887766544433   1     11111       12345778899999886


Q ss_pred             C
Q 043792          107 E  107 (294)
Q Consensus       107 ~  107 (294)
                      .
T Consensus        65 ~   65 (152)
T d1i36a2          65 T   65 (152)
T ss_dssp             C
T ss_pred             c
Confidence            5

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.71  E-value=1.7e-05  Score=58.55  Aligned_cols=37  Identities=16%  Similarity=0.188  Sum_probs=34.1

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChh
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQ   64 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   64 (294)
                      |||+|+|+ |.+|+.++..|.+.|++|.+++|++....
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~   37 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYC   37 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhh
Confidence            79999998 99999999999999999999999876544

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.70  E-value=4.8e-05  Score=56.34  Aligned_cols=78  Identities=8%  Similarity=-0.079  Sum_probs=55.7

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCC-ChhHHHHHhccCCE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPF-DYHSLVNALKGCSG  101 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~-~~~~~~~~~~~~d~  101 (294)
                      -.++.+|+|+|+ |.+|...+..+...|.+|+++++++++.+..++   +     +.+.+. |.. +.+..+.....+|.
T Consensus        25 ~~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~---l-----Ga~~~i-~~~~~~~~~~~~~~~~d~   94 (168)
T d1piwa2          25 CGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK---M-----GADHYI-ATLEEGDWGEKYFDTFDL   94 (168)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH---H-----TCSEEE-EGGGTSCHHHHSCSCEEE
T ss_pred             cCCCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhc---c-----CCcEEe-eccchHHHHHhhhcccce
Confidence            345789999997 999999999888899999999999888777665   4     332222 222 22334444557899


Q ss_pred             EEecCCCCC
Q 043792          102 LFYSFEPPS  110 (294)
Q Consensus       102 Vih~a~~~~  110 (294)
                      ++.+.+...
T Consensus        95 vi~~~~~~~  103 (168)
T d1piwa2          95 IVVCASSLT  103 (168)
T ss_dssp             EEECCSCST
T ss_pred             EEEEecCCc
Confidence            999976533

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.69  E-value=1.7e-05  Score=58.38  Aligned_cols=66  Identities=12%  Similarity=0.183  Sum_probs=52.0

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEecC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSF  106 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~a  106 (294)
                      |||.|+|- |.+|+.+++.|+++|++|++.+|++++.+.+.+   .     ....       ..+..++++++|+||-|.
T Consensus         1 MkIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~---~-----~~~~-------~~~~~e~~~~~d~ii~~v   64 (161)
T d1vpda2           1 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA---A-----GAET-------ASTAKAIAEQCDVIITML   64 (161)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH---T-----TCEE-------CSSHHHHHHHCSEEEECC
T ss_pred             CEEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHH---h-----hhhh-------cccHHHHHhCCCeEEEEc
Confidence            68999996 999999999999999999999999877776665   2     2221       123566778899999987


Q ss_pred             CC
Q 043792          107 EP  108 (294)
Q Consensus       107 ~~  108 (294)
                      ..
T Consensus        65 ~~   66 (161)
T d1vpda2          65 PN   66 (161)
T ss_dssp             SS
T ss_pred             CC
Confidence            53

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=97.69  E-value=4.5e-05  Score=53.80  Aligned_cols=70  Identities=17%  Similarity=0.261  Sum_probs=56.7

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHH-hccCCEEEec
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNA-LKGCSGLFYS  105 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~Vih~  105 (294)
                      |+|+|.|. |-+|+.+++.|  ++++|.+++.+++..+.+..        .++.++.+|.++++.|+++ +++++.+|-+
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~~--------~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~   69 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKVLR--------SGANFVHGDPTRVSDLEKANVRGARAVIVN   69 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHHHH--------TTCEEEESCTTSHHHHHHTTCTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHHHh--------cCccccccccCCHHHHHHhhhhcCcEEEEe
Confidence            57899997 88899999998  46678888888877666655        3789999999999988876 5678988876


Q ss_pred             CC
Q 043792          106 FE  107 (294)
Q Consensus       106 a~  107 (294)
                      ..
T Consensus        70 ~~   71 (129)
T d2fy8a1          70 LE   71 (129)
T ss_dssp             CS
T ss_pred             cc
Confidence            54

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.68  E-value=6.9e-05  Score=53.89  Aligned_cols=35  Identities=29%  Similarity=0.277  Sum_probs=28.2

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCC---CeEEEEecCC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRG---YTVHAALHNH   60 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~r~~   60 (294)
                      .|||.|.||||++|+.+++.|.+++   .++..+..+.
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~   39 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAE   39 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecc
Confidence            4899999999999999999998754   4666665443

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.67  E-value=2e-05  Score=59.26  Aligned_cols=75  Identities=13%  Similarity=0.158  Sum_probs=53.7

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCCh---hHHHHHh--cc
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDY---HSLVNAL--KG   98 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~---~~~~~~~--~~   98 (294)
                      .++.+|||+||+|.+|..++..+...|.+|+++++++++.+.+++   .     +...+ .|..++   +.+.+..  ++
T Consensus        24 ~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~---~-----Ga~~v-i~~~~~~~~~~v~~~t~~~g   94 (183)
T d1pqwa_          24 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR---L-----GVEYV-GDSRSVDFADEILELTDGYG   94 (183)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT---T-----CCSEE-EETTCSTHHHHHHHHTTTCC
T ss_pred             CCCCEEEEECCCCCcccccchhhccccccceeeeccccccccccc---c-----ccccc-ccCCccCHHHHHHHHhCCCC
Confidence            456899999999999999999999999999999988766555544   2     22222 133333   3344433  35


Q ss_pred             CCEEEecCC
Q 043792           99 CSGLFYSFE  107 (294)
Q Consensus        99 ~d~Vih~a~  107 (294)
                      +|+||.+.+
T Consensus        95 ~d~v~d~~g  103 (183)
T d1pqwa_          95 VDVVLNSLA  103 (183)
T ss_dssp             EEEEEECCC
T ss_pred             EEEEEeccc
Confidence            899999988

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.67  E-value=2.3e-05  Score=58.38  Aligned_cols=75  Identities=17%  Similarity=0.113  Sum_probs=45.1

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      |+||.|.||||+.|..+++.|.++. .++..+..+...-+.+..   ....  ...-  .++ ...+..+..+++|+||-
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~---~~p~--~~~~--~~~-~~~~~~~~~~~~dvvf~   72 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEE---IFPS--TLEN--SIL-SEFDPEKVSKNCDVLFT   72 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHH---HCGG--GCCC--CBC-BCCCHHHHHHHCSEEEE
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccc---cCch--hhcc--ccc-cccCHhHhccccceEEE
Confidence            6899999999999999999999874 566666544333333333   1100  0000  111 11223344567999987


Q ss_pred             cCCC
Q 043792          105 SFEP  108 (294)
Q Consensus       105 ~a~~  108 (294)
                      +...
T Consensus        73 a~p~   76 (176)
T d1vkna1          73 ALPA   76 (176)
T ss_dssp             CCST
T ss_pred             cccc
Confidence            7653

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.65  E-value=0.0009  Score=45.62  Aligned_cols=96  Identities=13%  Similarity=0.061  Sum_probs=65.3

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ..++++|+|+|+ |-+|..-++.|++.|.+|++++....+.  +..   . ....+++++..++.+.+     +.+++.|
T Consensus         9 ~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~--~~~---~-~~~~~i~~~~~~~~~~d-----l~~~~lv   76 (113)
T d1pjqa1           9 QLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQ--FTV---W-ANEGMLTLVEGPFDETL-----LDSCWLA   76 (113)
T ss_dssp             CCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHH--HHH---H-HTTTSCEEEESSCCGGG-----GTTCSEE
T ss_pred             EeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChH--HHH---H-HhcCCceeeccCCCHHH-----hCCCcEE
Confidence            346799999998 9999999999999999999988765533  222   1 12347888887775432     5577877


Q ss_pred             EecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecC
Q 043792          103 FYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSS  148 (294)
Q Consensus       103 ih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss  148 (294)
                      +.+.+..               .-...+.+.|++. +  .+|++..
T Consensus        77 ~~at~d~---------------~~n~~i~~~a~~~-~--ilVNv~D  104 (113)
T d1pjqa1          77 IAATDDD---------------TVNQRVSDAAESR-R--IFCNVVD  104 (113)
T ss_dssp             EECCSCH---------------HHHHHHHHHHHHT-T--CEEEETT
T ss_pred             eecCCCH---------------HHHHHHHHHHHHc-C--CEEEeCC
Confidence            7664421               1123466777776 5  4677554

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.65  E-value=0.00018  Score=55.68  Aligned_cols=76  Identities=9%  Similarity=-0.027  Sum_probs=54.2

Q ss_pred             CCCCCeEEEeCC----------------CchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCC
Q 043792           23 SNATKTVCVMDA----------------SGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADP   86 (294)
Q Consensus        23 ~~~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl   86 (294)
                      ...+++||||+|                ||..|.+|++++..+|++|+.+.-....           .....+..+... 
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~-----------~~p~~~~~~~~~-   70 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL-----------PTPPFVKRVDVM-   70 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC-----------CCCTTEEEEECC-
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc-----------Ccccccccceeh-
Confidence            456788999886                7999999999999999999998764421           111255655443 


Q ss_pred             CChhH----HHHHhccCCEEEecCCCCCC
Q 043792           87 FDYHS----LVNALKGCSGLFYSFEPPSD  111 (294)
Q Consensus        87 ~~~~~----~~~~~~~~d~Vih~a~~~~~  111 (294)
                       ..++    +.+.+.++|++|++|+....
T Consensus        71 -t~~~m~~~~~~~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          71 -TALEMEAAVNASVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             -SHHHHHHHHHHHGGGCSEEEECCBCCSE
T ss_pred             -hhHHHHHHHHhhhccceeEeeeechhhh
Confidence             3333    34445689999999888553

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.64  E-value=0.00016  Score=53.43  Aligned_cols=99  Identities=11%  Similarity=0.078  Sum_probs=64.6

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCC--CChhHHHHHhc----
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADP--FDYHSLVNALK----   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl--~~~~~~~~~~~----   97 (294)
                      ..+.+|+|+| +|.+|...+..+...|.+|+++++++++.+..++   +   .....+ ..|-  .+...+.+.++    
T Consensus        25 ~~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~---~---ga~~~~-~~~~~~~~~~~~~~~~~~~~g   96 (170)
T d1e3ja2          25 QLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN---C---GADVTL-VVDPAKEEESSIIERIRSAIG   96 (170)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---T---TCSEEE-ECCTTTSCHHHHHHHHHHHSS
T ss_pred             CCCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH---c---CCcEEE-eccccccccchhhhhhhcccc
Confidence            4567999998 5899999999999999999999998877666555   3   122222 2222  23334444432    


Q ss_pred             -cCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecC
Q 043792           98 -GCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSS  148 (294)
Q Consensus        98 -~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss  148 (294)
                       ++|+||.+++...               .....++.++..   .+++.++.
T Consensus        97 ~g~D~vid~~g~~~---------------~~~~a~~~~~~~---G~iv~~G~  130 (170)
T d1e3ja2          97 DLPNVTIDCSGNEK---------------CITIGINITRTG---GTLMLVGM  130 (170)
T ss_dssp             SCCSEEEECSCCHH---------------HHHHHHHHSCTT---CEEEECSC
T ss_pred             cCCceeeecCCChH---------------HHHHHHHHHhcC---CceEEEec
Confidence             4899999988421               123344555444   47887763

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=97.63  E-value=1.3e-05  Score=60.65  Aligned_cols=82  Identities=16%  Similarity=0.129  Sum_probs=54.6

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      +.|+||.|+|| |-.|+.++..|.+.|++|++.+|+++..+.+.....-....++++. .-++.-..++.++++++|.||
T Consensus         5 ~~m~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l-~~~i~~t~~l~~a~~~ad~ii   82 (189)
T d1n1ea2           5 LYLNKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQL-ASNITFTSDVEKAYNGAEIIL   82 (189)
T ss_dssp             CCEEEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBC-CTTEEEESCHHHHHTTCSCEE
T ss_pred             ceeceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhccccccccccccc-ccccccchhhhhccCCCCEEE
Confidence            34678999998 8899999999999999999999987766665542100000111110 111211235788899999998


Q ss_pred             ecCC
Q 043792          104 YSFE  107 (294)
Q Consensus       104 h~a~  107 (294)
                      .+..
T Consensus        83 iavP   86 (189)
T d1n1ea2          83 FVIP   86 (189)
T ss_dssp             ECSC
T ss_pred             EcCc
Confidence            8754

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.62  E-value=0.00014  Score=52.13  Aligned_cols=94  Identities=15%  Similarity=0.082  Sum_probs=53.1

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCC----CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRG----YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      |||.|.||||+.|+.+++.|+++.    .++..++.+....+.. .   +  ........  +..+    .+.++++|+|
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~-~---~--~~~~~~~~--~~~~----~~~~~~~Dvv   68 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAP-N---F--GKDAGMLH--DAFD----IESLKQLDAV   68 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCC-C---S--SSCCCBCE--ETTC----HHHHTTCSEE
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEecccccccccc-c---c--CCcceeee--cccc----hhhhccccEE
Confidence            689999999999999999998753    4555555443221110 0   0  00011110  1112    2345789999


Q ss_pred             EecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCc-EEEEecCc
Q 043792          103 FYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD-KVVFTSSL  149 (294)
Q Consensus       103 ih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~~v~~Ss~  149 (294)
                      |.+....                -+..+...+.+. +.+ .+|=.|+.
T Consensus        69 F~alp~~----------------~s~~~~~~l~~~-g~~~~VIDlSsd   99 (147)
T d1mb4a1          69 ITCQGGS----------------YTEKVYPALRQA-GWKGYWIDAAST   99 (147)
T ss_dssp             EECSCHH----------------HHHHHHHHHHHT-TCCSEEEESSST
T ss_pred             EEecCch----------------HHHHHhHHHHHc-CCceEEEeCCcc
Confidence            9987521                133455555555 654 46666664

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.58  E-value=0.00035  Score=52.03  Aligned_cols=31  Identities=23%  Similarity=0.184  Sum_probs=27.3

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHC-CCeEEEE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLR-GYTVHAA   56 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~   56 (294)
                      |+||.|.||||+.|..|++.|.++ ..++..+
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l   32 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITAL   32 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEee
Confidence            689999999999999999999998 4666655

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.57  E-value=6.1e-05  Score=55.89  Aligned_cols=74  Identities=7%  Similarity=0.046  Sum_probs=53.0

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ..++++|+|.|+ |..++.++..|.+.|.+|+++.|+.++.+.+...+   .....+..+  +..+.+     ..++|.|
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~---~~~~~~~~~--~~~~~~-----~~~~dli   83 (170)
T d1nyta1          15 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLF---AHTGSIQAL--SMDELE-----GHEFDLI   83 (170)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHT---GGGSSEEEC--CSGGGT-----TCCCSEE
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHH---hhccccccc--cccccc-----cccccee
Confidence            446789999998 88899999999999999999999988887776632   212233332  322211     2468999


Q ss_pred             EecCC
Q 043792          103 FYSFE  107 (294)
Q Consensus       103 ih~a~  107 (294)
                      |++-.
T Consensus        84 IN~Tp   88 (170)
T d1nyta1          84 INATS   88 (170)
T ss_dssp             EECCS
T ss_pred             ecccc
Confidence            99943

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.54  E-value=0.00012  Score=54.06  Aligned_cols=78  Identities=14%  Similarity=0.127  Sum_probs=57.9

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      -..+.+|+|.|+ |.+|...+..+...|.++++++++.++.+..++   +     +.+.+ .|..+.+......+++|++
T Consensus        28 ~~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~---l-----Gad~~-i~~~~~~~~~~~~~~~D~v   97 (168)
T d1uufa2          28 AGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA---L-----GADEV-VNSRNADEMAAHLKSFDFI   97 (168)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH---H-----TCSEE-EETTCHHHHHTTTTCEEEE
T ss_pred             CCCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHhc---c-----CCcEE-EECchhhHHHHhcCCCcee
Confidence            345789999997 889999999999999999999988877665554   3     22222 3555666555556789999


Q ss_pred             EecCCCCC
Q 043792          103 FYSFEPPS  110 (294)
Q Consensus       103 ih~a~~~~  110 (294)
                      |.+.+...
T Consensus        98 id~~g~~~  105 (168)
T d1uufa2          98 LNTVAAPH  105 (168)
T ss_dssp             EECCSSCC
T ss_pred             eeeeecch
Confidence            99987543

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.53  E-value=5.7e-05  Score=54.91  Aligned_cols=66  Identities=15%  Similarity=0.169  Sum_probs=50.4

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEecC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSF  106 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~a  106 (294)
                      |||.++|+ |.+|+++++.|++.|++|++..|+.++.+.+.+++       ++.+       ..+..++++++|+||-+.
T Consensus         1 MkIg~IG~-G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~-------g~~~-------~~~~~~~~~~~dvIilav   65 (152)
T d2ahra2           1 MKIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL-------ALPY-------AMSHQDLIDQVDLVILGI   65 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH-------TCCB-------CSSHHHHHHTCSEEEECS
T ss_pred             CEEEEEec-cHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc-------ceee-------echhhhhhhccceeeeec
Confidence            68999986 99999999999999999999999877766665521       1111       123566678999999776


Q ss_pred             C
Q 043792          107 E  107 (294)
Q Consensus       107 ~  107 (294)
                      -
T Consensus        66 k   66 (152)
T d2ahra2          66 K   66 (152)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=97.53  E-value=0.00042  Score=51.06  Aligned_cols=42  Identities=12%  Similarity=0.234  Sum_probs=34.1

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCC--eEEEEecCCCChhhHHH
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGY--TVHAALHNHGKLQCIEE   68 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~~   68 (294)
                      |++|+|+|. |.+|..+++.|.+.|+  +|++++++++..+....
T Consensus         1 Mk~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~   44 (171)
T d2g5ca2           1 MQNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD   44 (171)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH
T ss_pred             CCEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHH
Confidence            578999986 9999999999999986  68888887655554444

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.51  E-value=0.00053  Score=50.87  Aligned_cols=75  Identities=13%  Similarity=0.167  Sum_probs=56.1

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEec
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYS  105 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~  105 (294)
                      +.+|.|+|- |.+|+.+++.|++.||+|++++|++++.+.+..   .........    -....+++.+.+..+|.+|-+
T Consensus         2 ~~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~---~~~~~~~~~----~a~~~~~~~~~~~~~~~ii~~   73 (176)
T d2pgda2           2 QADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLA---NEAKGTKVL----GAHSLEEMVSKLKKPRRIILL   73 (176)
T ss_dssp             CBSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHH---TTTTTSSCE----ECSSHHHHHHHBCSSCEEEEC
T ss_pred             CCcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH---hcccccccc----chhhhhhhhhhhcccceEEEe
Confidence            468999997 999999999999999999999999988777665   211111111    123556777888889999888


Q ss_pred             CCC
Q 043792          106 FEP  108 (294)
Q Consensus       106 a~~  108 (294)
                      ...
T Consensus        74 ~~~   76 (176)
T d2pgda2          74 VKA   76 (176)
T ss_dssp             SCT
T ss_pred             cCc
Confidence            654

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.43  E-value=3.5e-05  Score=56.98  Aligned_cols=43  Identities=28%  Similarity=0.336  Sum_probs=39.6

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHH
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEE   68 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~   68 (294)
                      +..|||+||+|.+|+..++.....|.+|++++++.++.+.+.+
T Consensus        24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~   66 (167)
T d1tt7a2          24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ   66 (167)
T ss_dssp             GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHh
Confidence            4579999999999999999999999999999999998888877

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=97.40  E-value=0.00012  Score=53.40  Aligned_cols=103  Identities=12%  Similarity=0.107  Sum_probs=74.0

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      +.-+|+|+|+ |-.|.+-++.....|.+|++++.+.+..+++...+   .  ..++.   -..+.+.+.+.++++|.||-
T Consensus        31 ~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~---~--~~~~~---~~~~~~~l~~~~~~aDivI~  101 (168)
T d1pjca1          31 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLF---G--SRVEL---LYSNSAEIETAVAEADLLIG  101 (168)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---G--GGSEE---EECCHHHHHHHHHTCSEEEE
T ss_pred             CCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhh---c--cccee---ehhhhhhHHHhhccCcEEEE
Confidence            4579999998 99999999999999999999999988777776632   1  13333   24567789999999999999


Q ss_pred             cCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecC
Q 043792          105 SFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSS  148 (294)
Q Consensus       105 ~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss  148 (294)
                      ++-.+......   +      -+...++.+++. .  -+|=++.
T Consensus       102 aalipG~~aP~---l------It~~mv~~Mk~G-S--VIVDvai  133 (168)
T d1pjca1         102 AVLVPGRRAPI---L------VPASLVEQMRTG-S--VIVDVAV  133 (168)
T ss_dssp             CCCCTTSSCCC---C------BCHHHHTTSCTT-C--EEEETTC
T ss_pred             eeecCCcccCe---e------ecHHHHhhcCCC-c--EEEEeec
Confidence            98876643321   1      144455555444 3  3565554

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.40  E-value=5.3e-05  Score=56.54  Aligned_cols=95  Identities=17%  Similarity=0.093  Sum_probs=63.3

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCCEEE
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCSGLF  103 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~Vi  103 (294)
                      +.+|||+||+|.+|+..++.....|.+|+++++++++.+.+++   .     +.+.+. |..+.+ +.+.+.  ..|.+|
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~---l-----Gad~vi-~~~~~~-~~~~l~~~~~~~vv  101 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKS---L-----GASRVL-PRDEFA-ESRPLEKQVWAGAI  101 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH---H-----TEEEEE-EGGGSS-SCCSSCCCCEEEEE
T ss_pred             CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHh---h-----cccccc-ccccHH-HHHHHHhhcCCeeE
Confidence            3589999999999999999999999999999999888877766   3     444332 222211 111222  258888


Q ss_pred             ecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792          104 YSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus       104 h~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      ++.+..                .....++.++..   .|+|.++..
T Consensus       102 D~Vgg~----------------~~~~~l~~l~~~---Griv~~G~~  128 (177)
T d1o89a2         102 DTVGDK----------------VLAKVLAQMNYG---GCVAACGLA  128 (177)
T ss_dssp             ESSCHH----------------HHHHHHHTEEEE---EEEEECCCT
T ss_pred             EEcchH----------------HHHHHHHHhccc---cceEeeccc
Confidence            887621                123444444444   488887654

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.39  E-value=0.00028  Score=52.61  Aligned_cols=76  Identities=22%  Similarity=0.235  Sum_probs=50.5

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC--hhhHHHHHhhccCCCCe--EEEECCCCChhHHHHHhccCCEE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK--LQCIEEELINYNEEKKL--KVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~l~~~~~~~~~~~~v--~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      |||.|+|+ |-.|+.++..|.+.|++|.+..|..+.  .+.+..    ...+...  .....++.-..++.++++++|.|
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~I   75 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISA----GREHPRLGVKLNGVEIFWPEQLEKCLENAEVV   75 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHT----TCCBTTTTBCCCSEEEECGGGHHHHHTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhh----hhhhhhhcchhccccccccccHHHHHhccchh
Confidence            79999998 999999999999999999999885442  222222    0011111  00011122245688889999999


Q ss_pred             EecCC
Q 043792          103 FYSFE  107 (294)
Q Consensus       103 ih~a~  107 (294)
                      |.+..
T Consensus        76 i~avp   80 (180)
T d1txga2          76 LLGVS   80 (180)
T ss_dssp             EECSC
T ss_pred             hcccc
Confidence            88764

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.38  E-value=0.00016  Score=53.55  Aligned_cols=75  Identities=13%  Similarity=0.166  Sum_probs=55.1

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ..++++|+|.|+ |..++.++..|.+.+.+|+++.|+.++.+.+.+.+   ....++.....|-.       .+.++|.|
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~---~~~~~~~~~~~~~~-------~~~~~dii   83 (171)
T d1p77a1          15 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERF---QPYGNIQAVSMDSI-------PLQTYDLV   83 (171)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHH---GGGSCEEEEEGGGC-------CCSCCSEE
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHH---hhccccchhhhccc-------ccccccee
Confidence            456789999998 77899999999998899999999988888777743   22224444443321       13578999


Q ss_pred             EecCCC
Q 043792          103 FYSFEP  108 (294)
Q Consensus       103 ih~a~~  108 (294)
                      |++...
T Consensus        84 IN~tp~   89 (171)
T d1p77a1          84 INATSA   89 (171)
T ss_dssp             EECCCC
T ss_pred             eecccc
Confidence            999543

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=97.37  E-value=0.00013  Score=54.66  Aligned_cols=37  Identities=22%  Similarity=0.312  Sum_probs=29.7

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRG-YTVHAALHN   59 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~   59 (294)
                      +.++.||.|.||||+.|..+++.|.++. .++..+..+
T Consensus         2 s~~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~   39 (183)
T d2cvoa1           2 SGEEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTAD   39 (183)
T ss_dssp             CSSCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECS
T ss_pred             CCCccEEEEECcccHHHHHHHHHHHhCCCceEEEEecc
Confidence            3456799999999999999999999985 566665433

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=0.0013  Score=48.34  Aligned_cols=76  Identities=13%  Similarity=0.001  Sum_probs=54.1

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhhccCCCCeE-EEECCCCChhHHHHHhc----
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINYNEEKKLK-VFQADPFDYHSLVNALK----   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~~~v~-~~~~Dl~~~~~~~~~~~----   97 (294)
                      .++.+|+|+|+ |.+|...+..+...|. +|+++++++++.+..++   +     +.+ ++..+-.+.....+.++    
T Consensus        25 ~~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~---~-----Ga~~~~~~~~~~~~~~~~~~~~~~g   95 (171)
T d1pl8a2          25 TLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE---I-----GADLVLQISKESPQEIARKVEGQLG   95 (171)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH---T-----TCSEEEECSSCCHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHH---h-----CCcccccccccccccccccccccCC
Confidence            34678999987 9999999999999997 79988988776665554   3     332 33334345544444432    


Q ss_pred             -cCCEEEecCCC
Q 043792           98 -GCSGLFYSFEP  108 (294)
Q Consensus        98 -~~d~Vih~a~~  108 (294)
                       ++|+||.+.+.
T Consensus        96 ~g~Dvvid~~G~  107 (171)
T d1pl8a2          96 CKPEVTIECTGA  107 (171)
T ss_dssp             SCCSEEEECSCC
T ss_pred             CCceEEEeccCC
Confidence             57999999884

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=97.28  E-value=0.00011  Score=53.31  Aligned_cols=65  Identities=23%  Similarity=0.305  Sum_probs=47.4

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEec
Q 043792           27 KTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYS  105 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~  105 (294)
                      |||.++|+ |.+|+++++.|++.| ++|++.+|++++.+.+.++.       ++... .|.   +    .+.++|+||-+
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~-------~~~~~-~~~---~----~v~~~Div~la   64 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL-------GVETS-ATL---P----ELHSDDVLILA   64 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT-------CCEEE-SSC---C----CCCTTSEEEEC
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhc-------ccccc-ccc---c----cccccceEEEe
Confidence            68999998 999999999999887 99999999987777766521       33332 222   1    14567988876


Q ss_pred             CC
Q 043792          106 FE  107 (294)
Q Consensus       106 a~  107 (294)
                      .-
T Consensus        65 vk   66 (152)
T d1yqga2          65 VK   66 (152)
T ss_dssp             SC
T ss_pred             cC
Confidence            43

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=97.27  E-value=0.0008  Score=49.63  Aligned_cols=78  Identities=14%  Similarity=0.025  Sum_probs=59.8

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCC-------------------
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADP-------------------   86 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl-------------------   86 (294)
                      .-+|+|+|| |-.|.+-++-....|.+|.+++.+....+++.+   .     .-+++..+.                   
T Consensus        29 pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~---l-----~~~~i~~~~~~~~~~~~~~gyA~~~s~~   99 (183)
T d1l7da1          29 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVES---L-----GGKFITVDDEAMKTAETAGGYAKEMGEE   99 (183)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH---T-----TCEECCC---------------------
T ss_pred             CcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHH---h-----hcceEEEeccccccccccccchhhcCHH
Confidence            458999998 999999999999999999999999999888877   3     222222111                   


Q ss_pred             ---CChhHHHHHhccCCEEEecCCCCCCC
Q 043792           87 ---FDYHSLVNALKGCSGLFYSFEPPSDH  112 (294)
Q Consensus        87 ---~~~~~~~~~~~~~d~Vih~a~~~~~~  112 (294)
                         .+.+.+.+.++++|.||-.+-.+...
T Consensus       100 ~~~~~~~~l~~~l~~aDlVI~talipG~~  128 (183)
T d1l7da1         100 FRKKQAEAVLKELVKTDIAITTALIPGKP  128 (183)
T ss_dssp             --CCHHHHHHHHHTTCSEEEECCCCTTSC
T ss_pred             HHHHHHHHHHHHHHhhhhheeeeecCCcc
Confidence               12355677788999999998776543

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.26  E-value=0.00053  Score=51.14  Aligned_cols=78  Identities=18%  Similarity=0.049  Sum_probs=53.2

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhhccCCCCe-EEEECCCCChhHHHHH----hc
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINYNEEKKL-KVFQADPFDYHSLVNA----LK   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~~~v-~~~~~Dl~~~~~~~~~----~~   97 (294)
                      ..+.+|+|+|+ |.+|...+..+...|. +|+++++++++.+..++   +     +. .++...-.+..+..+.    ..
T Consensus        27 ~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~---l-----Ga~~vi~~~~~~~~~~~~~i~~~~~   97 (182)
T d1vj0a2          27 FAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE---I-----GADLTLNRRETSVEERRKAIMDITH   97 (182)
T ss_dssp             CBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH---T-----TCSEEEETTTSCHHHHHHHHHHHTT
T ss_pred             CCCCEEEEECC-Cccchhheeccccccccccccccccccccccccc---c-----cceEEEeccccchHHHHHHHHHhhC
Confidence            45789999997 8999999999999997 79999998877666555   3     22 2332222233233222    22


Q ss_pred             --cCCEEEecCCCCC
Q 043792           98 --GCSGLFYSFEPPS  110 (294)
Q Consensus        98 --~~d~Vih~a~~~~  110 (294)
                        ++|+||.+.+...
T Consensus        98 ~~g~Dvvid~vG~~~  112 (182)
T d1vj0a2          98 GRGADFILEATGDSR  112 (182)
T ss_dssp             TSCEEEEEECSSCTT
T ss_pred             CCCceEEeecCCchh
Confidence              4799999987543

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.26  E-value=0.00011  Score=54.20  Aligned_cols=43  Identities=21%  Similarity=0.233  Sum_probs=37.8

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHH
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEE   68 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~   68 (294)
                      ++++|+|.|+ |..|+.++..|.+.|. +|.++.|+.++.+.+..
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~   59 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAA   59 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHH
Confidence            4689999998 8889999999999995 79999999888777766

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.18  E-value=0.0012  Score=45.94  Aligned_cols=30  Identities=10%  Similarity=0.160  Sum_probs=27.4

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAA   56 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~   56 (294)
                      |||.|.|++|-.|+.|.+.+.++|+++.+.
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~   30 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLK   30 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEE
Confidence            689999999999999999999999988764

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.17  E-value=0.00029  Score=52.28  Aligned_cols=97  Identities=7%  Similarity=-0.006  Sum_probs=62.5

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCCh---hHHHHHhc--
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDY---HSLVNALK--   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~---~~~~~~~~--   97 (294)
                      .++.+|+|.|+ |.+|...+..+...|. +|+++++++++.+..++   +     +.+.+ .|..+.   +.+.+...  
T Consensus        26 ~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~---l-----Ga~~~-i~~~~~~~~~~v~~~t~g~   95 (174)
T d1jqba2          26 EMGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKF---Y-----GATDI-LNYKNGHIEDQVMKLTNGK   95 (174)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHH---H-----TCSEE-ECGGGSCHHHHHHHHTTTS
T ss_pred             CCCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHh---h-----Ccccc-ccccchhHHHHHHHHhhcc
Confidence            45779999987 9999999999999996 68888887766555544   3     22211 233332   33444433  


Q ss_pred             cCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecC
Q 043792           98 GCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSS  148 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss  148 (294)
                      ++|+||.+.+....               ....++.+++.   .+++.++-
T Consensus        96 G~D~vid~~g~~~~---------------~~~a~~~~~~~---G~iv~~G~  128 (174)
T d1jqba2          96 GVDRVIMAGGGSET---------------LSQAVKMVKPG---GIISNINY  128 (174)
T ss_dssp             CEEEEEECSSCTTH---------------HHHHHHHEEEE---EEEEECCC
T ss_pred             CcceEEEccCCHHH---------------HHHHHHHHhcC---CEEEEEee
Confidence            48999999985431               22345555544   47887663

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.15  E-value=0.0003  Score=51.84  Aligned_cols=78  Identities=17%  Similarity=0.112  Sum_probs=52.9

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCChhhHHHHHhhccCCCCe-EEEECCCCCh-hHHHHHh--c
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEEELINYNEEKKL-KVFQADPFDY-HSLVNAL--K   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~~~v-~~~~~Dl~~~-~~~~~~~--~   97 (294)
                      ...+.+|+|+|++|.+|...+..+...| .+|+++++++++.+.+++   +     +. .++..+-.|. +.+.+..  .
T Consensus        25 ~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~---~-----Ga~~~i~~~~~~~~~~~~~~~~~~   96 (170)
T d1jvba2          25 LDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR---A-----GADYVINASMQDPLAEIRRITESK   96 (170)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH---H-----TCSEEEETTTSCHHHHHHHHTTTS
T ss_pred             CCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH---c-----CCceeeccCCcCHHHHHHHHhhcc
Confidence            3456899999999999999999999888 588888888766665555   3     22 2333332222 2333332  2


Q ss_pred             cCCEEEecCCC
Q 043792           98 GCSGLFYSFEP  108 (294)
Q Consensus        98 ~~d~Vih~a~~  108 (294)
                      ++|+||.+.+.
T Consensus        97 ~~d~vid~~g~  107 (170)
T d1jvba2          97 GVDAVIDLNNS  107 (170)
T ss_dssp             CEEEEEESCCC
T ss_pred             cchhhhccccc
Confidence            47999999874

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.10  E-value=0.00017  Score=54.29  Aligned_cols=44  Identities=7%  Similarity=0.043  Sum_probs=35.7

Q ss_pred             CCCCeEEE-eCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHH
Q 043792           24 NATKTVCV-MDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIE   67 (294)
Q Consensus        24 ~~~~~vlI-tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~   67 (294)
                      .++.+|+| +||+|.+|...++.....|.+|++++|+.+..+...
T Consensus        27 ~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~   71 (189)
T d1gu7a2          27 TPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVV   71 (189)
T ss_dssp             CTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHH
T ss_pred             CCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHH
Confidence            34556666 699999999999999999999999999877665443

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=97.07  E-value=0.00097  Score=50.12  Aligned_cols=69  Identities=12%  Similarity=-0.051  Sum_probs=50.6

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ...+++|.|.|. |-||+.+++.|...|.+|.+.++..........         +       +....++.++++.+|+|
T Consensus        46 eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~---------~-------~~~~~~l~~ll~~sD~i  108 (193)
T d1mx3a1          46 RIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSDGVERAL---------G-------LQRVSTLQDLLFHSDCV  108 (193)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHH---------T-------CEECSSHHHHHHHCSEE
T ss_pred             eeeCceEEEecc-ccccccceeeeeccccceeeccCcccccchhhh---------c-------cccccchhhccccCCEE
Confidence            456799999997 999999999999999999999987654322111         1       11223577788889988


Q ss_pred             EecCCC
Q 043792          103 FYSFEP  108 (294)
Q Consensus       103 ih~a~~  108 (294)
                      +.+...
T Consensus       109 ~~~~pl  114 (193)
T d1mx3a1         109 TLHCGL  114 (193)
T ss_dssp             EECCCC
T ss_pred             EEeecc
Confidence            766544

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=97.00  E-value=0.0021  Score=47.63  Aligned_cols=63  Identities=16%  Similarity=0.071  Sum_probs=49.3

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      ..+++|.|.|. |-||+.+++.|...|.+|++++|++...                     +..-..+++++++.+|+|+
T Consensus        40 l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~~---------------------~~~~~~~l~ell~~sDiv~   97 (181)
T d1qp8a1          40 IQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKEG---------------------PWRFTNSLEEALREARAAV   97 (181)
T ss_dssp             CTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCCS---------------------SSCCBSCSHHHHTTCSEEE
T ss_pred             ccCceEEEecc-ccccccceeeeecccccccccccccccc---------------------ceeeeechhhhhhccchhh
Confidence            56799999997 9999999999999999999999876421                     1111234778899999998


Q ss_pred             ecCCC
Q 043792          104 YSFEP  108 (294)
Q Consensus       104 h~a~~  108 (294)
                      .+...
T Consensus        98 ~~~pl  102 (181)
T d1qp8a1          98 CALPL  102 (181)
T ss_dssp             ECCCC
T ss_pred             ccccc
Confidence            77544

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=96.98  E-value=0.00072  Score=46.75  Aligned_cols=36  Identities=11%  Similarity=0.100  Sum_probs=32.8

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG   61 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   61 (294)
                      ..++|+|.|| |++|..++..|.++|.+|+++.+++.
T Consensus        29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            3589999998 99999999999999999999998764

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=96.97  E-value=0.00031  Score=53.12  Aligned_cols=39  Identities=21%  Similarity=0.049  Sum_probs=31.7

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHH
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIE   67 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~   67 (294)
                      |||.|+| .|++|..++..| ++|++|++++.+++..+.+.
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~~v~~l~   39 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPSKVDKIN   39 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHHHHHHHH
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHHHHHHHh
Confidence            7899998 599999998755 67999999998876555443

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.94  E-value=0.0035  Score=47.07  Aligned_cols=111  Identities=14%  Similarity=0.098  Sum_probs=64.9

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCCh---hHHHHHhc--
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDY---HSLVNALK--   97 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~---~~~~~~~~--   97 (294)
                      ..+.+|+|+|+ |.+|...+..+...|. +|+++++++++.+..++   +     +.+.+. |-.+.   +.+.++..  
T Consensus        24 ~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~---~-----Ga~~~~-~~~~~~~~~~i~~~t~g~   93 (195)
T d1kola2          24 GPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA---Q-----GFEIAD-LSLDTPLHEQIAALLGEP   93 (195)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH---T-----TCEEEE-TTSSSCHHHHHHHHHSSS
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhh---c-----cccEEE-eCCCcCHHHHHHHHhCCC
Confidence            45789999987 9999888888877775 78888888766665555   3     445443 22222   33444443  


Q ss_pred             cCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEec
Q 043792           98 GCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTS  147 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~S  147 (294)
                      ++|++|.+.+.......................++.++..   .+++.++
T Consensus        94 g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~g---G~v~~~G  140 (195)
T d1kola2          94 EVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVA---GKIGIPG  140 (195)
T ss_dssp             CEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEE---EEEEECS
T ss_pred             CcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcC---CEEEEee
Confidence            5799999988543222211111111122333444544444   4787766

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.91  E-value=0.0055  Score=42.57  Aligned_cols=89  Identities=16%  Similarity=0.085  Sum_probs=59.7

Q ss_pred             CCCCeEEEeCCC---chHHHHHHHHHHHCC-CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccC
Q 043792           24 NATKTVCVMDAS---GHFASALVRRLLLRG-YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGC   99 (294)
Q Consensus        24 ~~~~~vlItGat---G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~   99 (294)
                      +..++|.|.|+|   +..|..+.+.|.+.| ++|+.+..+.+...             ++. ..-++.|.      =..+
T Consensus         6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~-------------G~~-~y~sl~dl------p~~v   65 (129)
T d2csua1           6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQ-------------GVK-AYKSVKDI------PDEI   65 (129)
T ss_dssp             TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEET-------------TEE-CBSSTTSC------SSCC
T ss_pred             CCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccC-------------CeE-eecchhhc------CCCC
Confidence            456899999999   999999999987765 68888765432210             121 12233332      2357


Q ss_pred             CEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792          100 SGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus       100 d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      |.++-+...                ..+..+++.|.+. +++.++.+|+.
T Consensus        66 Dlvvi~vp~----------------~~~~~~~~~~~~~-g~~~~vi~s~G   98 (129)
T d2csua1          66 DLAIIVVPK----------------RFVKDTLIQCGEK-GVKGVVIITAG   98 (129)
T ss_dssp             SEEEECSCH----------------HHHHHHHHHHHHH-TCCEEEECCCS
T ss_pred             ceEEEecCh----------------HHhHHHHHHHHHc-CCCEEEEeccc
Confidence            888876542                2355678888888 89988888763

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.88  E-value=0.0065  Score=42.50  Aligned_cols=75  Identities=20%  Similarity=0.205  Sum_probs=49.5

Q ss_pred             eEEEeCCCchHHHHHHHHHHHC-CCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEecC
Q 043792           28 TVCVMDASGHFASALVRRLLLR-GYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSF  106 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~a  106 (294)
                      ||.|.|++|-.|+.+++.+.+. ++++.+.....+....                          +  ...++|+||.+.
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~--------------------------~--~~~~~DvvIDFS   52 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSL--------------------------L--TDGNTEVVIDFT   52 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHH--------------------------H--HTTTCSEEEECC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhh--------------------------h--ccccCCEEEEcc
Confidence            7999999999999999998775 5777664322111110                          0  113679999987


Q ss_pred             CCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792          107 EPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus       107 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      .+..                +...++.|.+. +++ +| ++|+
T Consensus        53 ~p~~----------------~~~~~~~~~~~-~~~-~V-iGTT   76 (135)
T d1yl7a1          53 HPDV----------------VMGNLEFLIDN-GIH-AV-VGTT   76 (135)
T ss_dssp             CTTT----------------HHHHHHHHHHT-TCE-EE-ECCC
T ss_pred             cHHH----------------HHHHHHHHHhc-CCC-EE-Eecc
Confidence            7644                45677777777 764 43 3444

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.85  E-value=0.00037  Score=51.83  Aligned_cols=76  Identities=13%  Similarity=0.079  Sum_probs=51.0

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEecC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSF  106 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~a  106 (294)
                      |||-|+|- |.+|..+++.|++.||+|.+.+|++++.+.+.++   ............ ..+.+.+...+...+.++-+.
T Consensus         2 MkIGvIGl-G~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   76 (178)
T d1pgja2           2 MDVGVVGL-GVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA---NASAPFAGNLKA-FETMEAFAASLKKPRKALILV   76 (178)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH---TTTSTTGGGEEE-CSCHHHHHHHBCSSCEEEECC
T ss_pred             CEEEEEee-hHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc---CCccccccchhh-hhhhhHHHHhcccceEEEEee
Confidence            68999996 9999999999999999999999998887777652   111111111111 223445555666666666654


Q ss_pred             C
Q 043792          107 E  107 (294)
Q Consensus       107 ~  107 (294)
                      .
T Consensus        77 ~   77 (178)
T d1pgja2          77 Q   77 (178)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.84  E-value=0.0012  Score=45.68  Aligned_cols=36  Identities=14%  Similarity=0.094  Sum_probs=32.4

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG   61 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   61 (294)
                      ..++|+|.|| |++|..++..|.+.|.+|+++.+.+.
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~   64 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDR   64 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecCc
Confidence            4579999998 99999999999999999999988653

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=96.84  E-value=0.00081  Score=48.65  Aligned_cols=24  Identities=25%  Similarity=0.372  Sum_probs=22.1

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCCC
Q 043792           28 TVCVMDASGHFASALVRRLLLRGY   51 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g~   51 (294)
                      ||.|.||||++|..|++.|.++.+
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCC
Confidence            799999999999999999988864

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=96.82  E-value=0.00099  Score=52.03  Aligned_cols=35  Identities=26%  Similarity=0.379  Sum_probs=31.9

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNH   60 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   60 (294)
                      ..+||+|+|| |..|...+.+|.++|++|+++.|+.
T Consensus         5 ~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           5 SQKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            3478999998 9999999999999999999999864

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.79  E-value=0.00067  Score=51.04  Aligned_cols=39  Identities=21%  Similarity=0.221  Sum_probs=34.7

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChh
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQ   64 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   64 (294)
                      +-+||.|.|| |.+|+.++..++..|++|++++++++..+
T Consensus         3 ~IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~   41 (192)
T d1f0ya2           3 IVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILA   41 (192)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             eeEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHH
Confidence            3479999998 99999999999999999999999876543

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.75  E-value=0.0028  Score=46.19  Aligned_cols=44  Identities=18%  Similarity=0.163  Sum_probs=37.3

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHH
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEE   68 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~   68 (294)
                      .++.+|+|.|+ |.+|...+..+...|.+|+++++++++.+..++
T Consensus        26 ~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~   69 (166)
T d1llua2          26 RPGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELARK   69 (166)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred             CCCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhhc
Confidence            45789999987 999999999999999999999998777665555

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.75  E-value=0.0023  Score=47.10  Aligned_cols=78  Identities=13%  Similarity=0.070  Sum_probs=52.3

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCChhhHHHHHhhccCCCCeEE-E-ECCCCC-hhHHHHHh--
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEEELINYNEEKKLKV-F-QADPFD-YHSLVNAL--   96 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~-~-~~Dl~~-~~~~~~~~--   96 (294)
                      -.++.+|+|.|+ |.+|...+..+...| .+|+++++++++.+...+   .     +... + ..+-.+ .....+..  
T Consensus        26 vk~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~---~-----Ga~~~i~~~~~~~~~~~~~~~~~~   96 (176)
T d2jhfa2          26 VTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE---V-----GATECVNPQDYKKPIQEVLTEMSN   96 (176)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH---T-----TCSEEECGGGCSSCHHHHHHHHTT
T ss_pred             CCCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH---h-----CCeeEEecCCchhHHHHHHHHHhc
Confidence            456789999999 668999999999987 588888888887776655   3     2222 2 122222 12222232  


Q ss_pred             ccCCEEEecCCCC
Q 043792           97 KGCSGLFYSFEPP  109 (294)
Q Consensus        97 ~~~d~Vih~a~~~  109 (294)
                      .++|++|.+.+..
T Consensus        97 ~G~D~vid~~G~~  109 (176)
T d2jhfa2          97 GGVDFSFEVIGRL  109 (176)
T ss_dssp             SCBSEEEECSCCH
T ss_pred             CCCCEEEecCCch
Confidence            2689999998853

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.75  E-value=0.0015  Score=44.71  Aligned_cols=35  Identities=17%  Similarity=0.087  Sum_probs=32.2

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG   61 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   61 (294)
                      .++++|.|| |++|..++..|.+.|.+|+++.|...
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            479999998 99999999999999999999998764

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.71  E-value=0.0045  Score=45.97  Aligned_cols=68  Identities=18%  Similarity=0.088  Sum_probs=50.1

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ...++++.|.|. |.||+.+++.+..-|.+|++.++...+......         .++.        .+++++++++|+|
T Consensus        41 ~l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~---------~~~~--------~~l~ell~~sDiv  102 (184)
T d1ygya1          41 EIFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQL---------GIEL--------LSLDDLLARADFI  102 (184)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHH---------TCEE--------CCHHHHHHHCSEE
T ss_pred             cccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChhHHhhc---------Ccee--------ccHHHHHhhCCEE
Confidence            345789999996 999999999999999999999887654333222         2221        3467788899988


Q ss_pred             EecCCC
Q 043792          103 FYSFEP  108 (294)
Q Consensus       103 ih~a~~  108 (294)
                      +-+...
T Consensus       103 ~~~~Pl  108 (184)
T d1ygya1         103 SVHLPK  108 (184)
T ss_dssp             EECCCC
T ss_pred             EEcCCC
Confidence            766544

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.70  E-value=0.0021  Score=47.35  Aligned_cols=76  Identities=14%  Similarity=0.094  Sum_probs=48.5

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCC-ChhHHHHHh----
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPF-DYHSLVNAL----   96 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~-~~~~~~~~~----   96 (294)
                      -.++.+|+|.|+ |.+|...+..+...|. .|++.++++++.+..++   +     +.+.+. |.. +.+.+.+.+    
T Consensus        26 ~~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~---l-----Ga~~~i-~~~~~~~~~~~~~~~~~   95 (176)
T d2fzwa2          26 LEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE---F-----GATECI-NPQDFSKPIQEVLIEMT   95 (176)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH---H-----TCSEEE-CGGGCSSCHHHHHHHHT
T ss_pred             CCCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHH---h-----CCcEEE-eCCchhhHHHHHHHHHc
Confidence            356789999998 5789999999999995 56666666666655554   3     322221 221 112222222    


Q ss_pred             -ccCCEEEecCCC
Q 043792           97 -KGCSGLFYSFEP  108 (294)
Q Consensus        97 -~~~d~Vih~a~~  108 (294)
                       .++|+||.+.+.
T Consensus        96 ~~g~D~vid~~G~  108 (176)
T d2fzwa2          96 DGGVDYSFECIGN  108 (176)
T ss_dssp             TSCBSEEEECSCC
T ss_pred             CCCCcEeeecCCC
Confidence             258999999884

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=96.70  E-value=0.0042  Score=46.28  Aligned_cols=70  Identities=14%  Similarity=0.023  Sum_probs=51.5

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ...+++|.|.|. |-||+.+++.|...|.+|...++...+......   .     +       +....++.++++++|+|
T Consensus        41 ~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~---~-----~-------~~~~~~l~~~l~~sD~v  104 (188)
T d2naca1          41 DLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKE---L-----N-------LTWHATREDMYPVCDVV  104 (188)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHH---H-----T-------CEECSSHHHHGGGCSEE
T ss_pred             eccccceeeccc-cccchhhhhhhhccCceEEEEeecccccccccc---c-----c-------ccccCCHHHHHHhccch
Confidence            346789999997 999999999999999999999987655443332   1     1       12234577788899988


Q ss_pred             EecCCC
Q 043792          103 FYSFEP  108 (294)
Q Consensus       103 ih~a~~  108 (294)
                      +-+...
T Consensus       105 ~~~~pl  110 (188)
T d2naca1         105 TLNCPL  110 (188)
T ss_dssp             EECSCC
T ss_pred             hhcccc
Confidence            666543

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.69  E-value=0.0012  Score=49.68  Aligned_cols=67  Identities=15%  Similarity=0.074  Sum_probs=49.6

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ...+++|.|.|- |.||+.+++.|..-|.+|++.++..+...  ..                +.....++.++++++|+|
T Consensus        40 el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~~~--~~----------------~~~~~~~l~~~l~~sDii  100 (197)
T d1j4aa1          40 EVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNPEL--EK----------------KGYYVDSLDDLYKQADVI  100 (197)
T ss_dssp             CGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCHHH--HH----------------TTCBCSCHHHHHHHCSEE
T ss_pred             cccCCeEEEecc-cccchhHHHhHhhhcccccccCccccccc--cc----------------ceeeeccccccccccccc
Confidence            346799999997 99999999999999999999987654321  11                111234577888889988


Q ss_pred             EecCCC
Q 043792          103 FYSFEP  108 (294)
Q Consensus       103 ih~a~~  108 (294)
                      +.+...
T Consensus       101 ~~~~pl  106 (197)
T d1j4aa1         101 SLHVPD  106 (197)
T ss_dssp             EECSCC
T ss_pred             cccCCc
Confidence            777554

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.69  E-value=0.0029  Score=46.59  Aligned_cols=77  Identities=13%  Similarity=0.099  Sum_probs=50.4

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhhccCCCCeE-EEECCCCC--hhHHHHHh--
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINYNEEKKLK-VFQADPFD--YHSLVNAL--   96 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~~~v~-~~~~Dl~~--~~~~~~~~--   96 (294)
                      ...+.+|+|+|+ |.+|...+..+...|. +|++.++++++.+..++   +     +.+ ++...-.+  ........  
T Consensus        26 v~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~---~-----Ga~~~i~~~~~~~~~~~~~~~~~~   96 (174)
T d1e3ia2          26 VTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA---L-----GATDCLNPRELDKPVQDVITELTA   96 (174)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH---T-----TCSEEECGGGCSSCHHHHHHHHHT
T ss_pred             CCCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHHH---h-----CCCcccCCccchhhhhhhHhhhhc
Confidence            345789999986 9999999999999997 57777777766554444   3     232 22211111  12222222  


Q ss_pred             ccCCEEEecCCC
Q 043792           97 KGCSGLFYSFEP  108 (294)
Q Consensus        97 ~~~d~Vih~a~~  108 (294)
                      .++|+||.+.+.
T Consensus        97 ~G~d~vie~~G~  108 (174)
T d1e3ia2          97 GGVDYSLDCAGT  108 (174)
T ss_dssp             SCBSEEEESSCC
T ss_pred             CCCcEEEEeccc
Confidence            368999999985

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=96.66  E-value=0.0017  Score=44.44  Aligned_cols=35  Identities=14%  Similarity=0.191  Sum_probs=32.1

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG   61 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   61 (294)
                      .++|+|.|| |++|-.++..|...|.+|+++.|...
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   56 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNR   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhcc
Confidence            579999998 99999999999999999999998653

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=96.65  E-value=0.0044  Score=46.30  Aligned_cols=70  Identities=13%  Similarity=-0.034  Sum_probs=50.9

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ...++++.|.|. |.||+.+++.|...|.+|.+.++..........   .            .....+++.++++.+|+|
T Consensus        44 ~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~---~------------~~~~~~~l~~ll~~sD~v  107 (191)
T d1gdha1          44 KLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEAS---Y------------QATFHDSLDSLLSVSQFF  107 (191)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHH---H------------TCEECSSHHHHHHHCSEE
T ss_pred             eecccceEEeec-ccchHHHHHHHHhhccccccccccccccchhhc---c------------cccccCCHHHHHhhCCeE
Confidence            345799999997 999999999999999999999887654433222   1            111224577888899988


Q ss_pred             EecCCC
Q 043792          103 FYSFEP  108 (294)
Q Consensus       103 ih~a~~  108 (294)
                      +.+...
T Consensus       108 ~l~~pl  113 (191)
T d1gdha1         108 SLNAPS  113 (191)
T ss_dssp             EECCCC
T ss_pred             EecCCC
Confidence            666443

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=96.60  E-value=0.00037  Score=50.88  Aligned_cols=91  Identities=20%  Similarity=0.188  Sum_probs=54.5

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHC-CCeEEEE-ecCCCCh--hhHHHHHhhccC-CCCeEEEECCCCChhHHHHHhccCC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLR-GYTVHAA-LHNHGKL--QCIEEELINYNE-EKKLKVFQADPFDYHSLVNALKGCS  100 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~--~~l~~~~~~~~~-~~~v~~~~~Dl~~~~~~~~~~~~~d  100 (294)
                      .+||.|.|++|-+|+.|++.+.+. +.++.+. +|...+.  ..+.+   +... ...+ .+..|      +...++.+|
T Consensus         4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~---~~~~~~~~~-~~~~~------~~~~~~~~D   73 (162)
T d1diha1           4 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGE---LAGAGKTGV-TVQSS------LDAVKDDFD   73 (162)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTC---SSSSSCCSC-CEESC------STTTTTSCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhh---hhccccCCc-eeecc------HHHHhcccc
Confidence            579999999999999999999886 6676655 3432211  00000   0000 0111 11222      333567889


Q ss_pred             EEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEE
Q 043792          101 GLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVV  144 (294)
Q Consensus       101 ~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v  144 (294)
                      +||.+..+                .++...++.|.+. ++ .+|
T Consensus        74 ViIDFs~p----------------~~~~~~~~~a~~~-~~-~~V   99 (162)
T d1diha1          74 VFIDFTRP----------------EGTLNHLAFCRQH-GK-GMV   99 (162)
T ss_dssp             EEEECSCH----------------HHHHHHHHHHHHT-TC-EEE
T ss_pred             eEEEeccH----------------HHHHHHHHHHHhc-cc-eeE
Confidence            99998653                3355778888888 75 343

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.59  E-value=0.0019  Score=40.51  Aligned_cols=37  Identities=22%  Similarity=0.237  Sum_probs=33.1

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCCh
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKL   63 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   63 (294)
                      +|+|.|.|+ |.+|+-++..-...|++|.+++.+.+..
T Consensus         1 ~k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~~p   37 (78)
T d3etja2           1 MKQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAEPA   37 (78)
T ss_dssp             CEEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSCGG
T ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCCCc
Confidence            579999998 9999999999999999999999876544

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=96.58  E-value=0.0017  Score=44.43  Aligned_cols=35  Identities=20%  Similarity=0.088  Sum_probs=31.9

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG   61 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   61 (294)
                      .++|+|.|| |++|..++..|.+.|.+|+++.|.+.
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence            478999998 99999999999999999999988753

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.57  E-value=0.0017  Score=44.85  Aligned_cols=35  Identities=11%  Similarity=0.088  Sum_probs=32.2

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG   61 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   61 (294)
                      .++++|.|| |+||-.++..|.+.|.+|+++.+++.
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence            479999998 99999999999999999999988764

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.53  E-value=0.0044  Score=45.65  Aligned_cols=78  Identities=10%  Similarity=0.037  Sum_probs=54.3

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCChhhHHHHHhhccCCCCeEEEE--CCCCC-hhHHHHHh--
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQ--ADPFD-YHSLVNAL--   96 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~--~Dl~~-~~~~~~~~--   96 (294)
                      ..++.+|+|+|+ |.+|...+..+...| .+|+++++++++.+..++   +     +.+.+.  -|-.+ .+.+.+..  
T Consensus        27 ~~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~---~-----GA~~~in~~~~~~~~~~~~~~~~g   97 (176)
T d1d1ta2          27 VKPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA---V-----GATECISPKDSTKPISEVLSEMTG   97 (176)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH---H-----TCSEEECGGGCSSCHHHHHHHHHT
T ss_pred             CCCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh---c-----CCcEEECccccchHHHHHHHHhcc
Confidence            345778999987 999999999999999 579999999888776555   3     333222  12221 23333333  


Q ss_pred             ccCCEEEecCCCC
Q 043792           97 KGCSGLFYSFEPP  109 (294)
Q Consensus        97 ~~~d~Vih~a~~~  109 (294)
                      .++|++|.+.+..
T Consensus        98 ~G~d~vi~~~g~~  110 (176)
T d1d1ta2          98 NNVGYTFEVIGHL  110 (176)
T ss_dssp             SCCCEEEECSCCH
T ss_pred             ccceEEEEeCCch
Confidence            3689999998853

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.53  E-value=0.0013  Score=49.21  Aligned_cols=74  Identities=18%  Similarity=0.034  Sum_probs=47.0

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEE-EecCCCChhhHHHHHhhccCCCCeEEEECCCCCh---hHHHHHh-ccCC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHA-ALHNHGKLQCIEEELINYNEEKKLKVFQADPFDY---HSLVNAL-KGCS  100 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~---~~~~~~~-~~~d  100 (294)
                      ...|||+||+|.+|+..++.+...|.++++ ++++.++...+..+  .   . .-.++  |..++   +.+++.. +++|
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~--~---g-ad~vi--~~~~~~~~~~~~~~~~~GvD  102 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSE--L---G-FDAAV--NYKTGNVAEQLREACPGGVD  102 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHH--S---C-CSEEE--ETTSSCHHHHHHHHCTTCEE
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhc--c---c-ceEEe--eccchhHHHHHHHHhccCce
Confidence            368999999999999999999989976554 45555444444431  1   1 11222  33332   2333332 2589


Q ss_pred             EEEecCC
Q 043792          101 GLFYSFE  107 (294)
Q Consensus       101 ~Vih~a~  107 (294)
                      +||.+.+
T Consensus       103 vv~D~vG  109 (187)
T d1vj1a2         103 VYFDNVG  109 (187)
T ss_dssp             EEEESSC
T ss_pred             EEEecCC
Confidence            9999987

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=96.52  E-value=0.0016  Score=44.98  Aligned_cols=35  Identities=17%  Similarity=0.241  Sum_probs=31.7

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG   61 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   61 (294)
                      .++|+|.|| |++|-.++..|.+.|.+|+++.|++.
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence            378999998 99999999999999999999988653

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=96.51  E-value=0.0027  Score=43.52  Aligned_cols=36  Identities=17%  Similarity=0.034  Sum_probs=32.6

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG   61 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   61 (294)
                      ..++++|+|| |+||-.++..|.+.|.+|+++.++..
T Consensus        21 ~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          21 VPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            3478999998 99999999999999999999998754

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.50  E-value=0.0011  Score=49.61  Aligned_cols=39  Identities=15%  Similarity=0.210  Sum_probs=34.5

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChh
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQ   64 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   64 (294)
                      .-+||.|+|| |.+|+.++..++..|++|++++++++..+
T Consensus         3 ~I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~   41 (186)
T d1wdka3           3 DVKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIE   41 (186)
T ss_dssp             CCSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHh
Confidence            3578999998 99999999999999999999999876543

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.48  E-value=0.0036  Score=45.53  Aligned_cols=75  Identities=15%  Similarity=0.077  Sum_probs=51.9

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCC-C-hhHHHHHhccCCE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPF-D-YHSLVNALKGCSG  101 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~-~-~~~~~~~~~~~d~  101 (294)
                      .++.+|+|.|+ |-+|...+..+...|.+|+++++++++.+..++   +     +++.+...-. | .+.+.+...+.+.
T Consensus        26 ~~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~---~-----Ga~~~~~~~~~~~~~~~~~~~~~~~~   96 (168)
T d1rjwa2          26 KPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE---L-----GADLVVNPLKEDAAKFMKEKVGGVHA   96 (168)
T ss_dssp             CTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH---T-----TCSEEECTTTSCHHHHHHHHHSSEEE
T ss_pred             CCCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhhh---c-----CcceecccccchhhhhcccccCCCce
Confidence            45789999976 889999999999999999999988877666655   3     3443332221 2 2345555566677


Q ss_pred             EEecCC
Q 043792          102 LFYSFE  107 (294)
Q Consensus       102 Vih~a~  107 (294)
                      +|.+++
T Consensus        97 ~v~~~~  102 (168)
T d1rjwa2          97 AVVTAV  102 (168)
T ss_dssp             EEESSC
T ss_pred             EEeecC
Confidence            776654

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.48  E-value=0.0021  Score=44.59  Aligned_cols=35  Identities=14%  Similarity=0.158  Sum_probs=32.1

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG   61 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   61 (294)
                      .++++|.|| |++|-.++..|.+.|.+|+++.|+..
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccc
Confidence            479999998 99999999999999999999999753

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.47  E-value=0.0023  Score=44.11  Aligned_cols=33  Identities=18%  Similarity=0.068  Sum_probs=30.6

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHN   59 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   59 (294)
                      .++++|+|| |+||..++..|.+.|.+|+++.|+
T Consensus        20 P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            468999998 999999999999999999999875

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.47  E-value=0.0082  Score=38.63  Aligned_cols=71  Identities=8%  Similarity=0.014  Sum_probs=48.9

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCCh-hhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKL-QCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      .|||-++|-+|-==+.|++.|.++|++|.+.|+...+. +.|..        .++++..+.  +.+.    +++.|.||.
T Consensus         1 ~~~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~--------~Gi~i~~gh--~~~~----i~~~d~vV~   66 (89)
T d1j6ua1           1 HMKIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRK--------LGIPIFVPH--SADN----WYDPDLVIK   66 (89)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHH--------TTCCEESSC--CTTS----CCCCSEEEE
T ss_pred             CcEEEEEeECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHH--------CCCeEEeee--cccc----cCCCCEEEE
Confidence            37888988755433578999999999999999876443 33443        256665442  2222    357899999


Q ss_pred             cCCCCC
Q 043792          105 SFEPPS  110 (294)
Q Consensus       105 ~a~~~~  110 (294)
                      ..+.+.
T Consensus        67 SsAI~~   72 (89)
T d1j6ua1          67 TPAVRD   72 (89)
T ss_dssp             CTTCCT
T ss_pred             ecCcCC
Confidence            988765

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=96.47  E-value=0.0023  Score=44.86  Aligned_cols=36  Identities=11%  Similarity=0.088  Sum_probs=32.6

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG   61 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   61 (294)
                      ..++|+|.|| |++|..++..|.+.|.+|+++.+.+.
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence            4589999998 99999999999999999999988654

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.42  E-value=0.0023  Score=43.57  Aligned_cols=35  Identities=14%  Similarity=0.075  Sum_probs=31.7

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG   61 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   61 (294)
                      .++++|.|| |++|-.++..|.+.|.+|+++.+.+.
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeecc
Confidence            478999998 99999999999999999999988654

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.42  E-value=0.0001  Score=55.01  Aligned_cols=44  Identities=20%  Similarity=0.207  Sum_probs=37.2

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHH
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEE   69 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~   69 (294)
                      .++++|+|.|+ |..++.++..|.+.| +|+++.|+.++.+.+.+.
T Consensus        16 ~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~   59 (177)
T d1nvta1          16 VKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKE   59 (177)
T ss_dssp             CCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHH
Confidence            46789999998 778999999997777 899999998887776653

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=96.31  E-value=0.0077  Score=43.50  Aligned_cols=37  Identities=22%  Similarity=0.201  Sum_probs=33.1

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHN   59 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   59 (294)
                      ...+++|+|.|.+..+|+.++..|.++|.+|+.+...
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~   70 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRF   70 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSS
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhccccccccc
Confidence            5678999999999999999999999999999887544

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.30  E-value=0.0056  Score=44.98  Aligned_cols=77  Identities=10%  Similarity=0.039  Sum_probs=51.9

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhhccCCCCeE-EEECCCCC--hhHHHHHh--
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINYNEEKKLK-VFQADPFD--YHSLVNAL--   96 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~~~v~-~~~~Dl~~--~~~~~~~~--   96 (294)
                      ..++.+|+|.|+ |.+|...+..+...|. +|+++++++++.+..++   +     +.+ ++...-.|  .+......  
T Consensus        25 ~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~---l-----Ga~~~i~~~~~d~~~~~~~~~~~~   95 (174)
T d1p0fa2          25 VTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE---L-----GATECLNPKDYDKPIYEVICEKTN   95 (174)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH---T-----TCSEEECGGGCSSCHHHHHHHHTT
T ss_pred             CCCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHH---c-----CCcEEEcCCCchhHHHHHHHHhcC
Confidence            456789999997 9999999999999985 68888888877766555   3     333 22111112  12232223  


Q ss_pred             ccCCEEEecCCC
Q 043792           97 KGCSGLFYSFEP  108 (294)
Q Consensus        97 ~~~d~Vih~a~~  108 (294)
                      .++|+||.+.+.
T Consensus        96 ~G~d~vid~~g~  107 (174)
T d1p0fa2          96 GGVDYAVECAGR  107 (174)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCcEEEEcCCC
Confidence            258999999884

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.28  E-value=0.0035  Score=47.20  Aligned_cols=70  Identities=14%  Similarity=0.032  Sum_probs=49.3

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-cCCE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-GCSG  101 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-~~d~  101 (294)
                      +..+++|+|-|- |-+|+++++.|.+.|.+|++.+.+.........   .     +.+.+     +.+   +++. +||+
T Consensus        24 ~L~gk~v~IqG~-G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~---~-----g~~~~-----~~~---~~~~~~~DI   86 (201)
T d1c1da1          24 SLDGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDTERVAHAVA---L-----GHTAV-----ALE---DVLSTPCDV   86 (201)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH---T-----TCEEC-----CGG---GGGGCCCSE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEecchHHHHHHHHh---h-----ccccc-----Ccc---cccccccee
Confidence            567899999995 999999999999999999988776544333322   1     22222     112   2343 7999


Q ss_pred             EEecCCCC
Q 043792          102 LFYSFEPP  109 (294)
Q Consensus       102 Vih~a~~~  109 (294)
                      ++-||...
T Consensus        87 ~iPcA~~~   94 (201)
T d1c1da1          87 FAPCAMGG   94 (201)
T ss_dssp             EEECSCSC
T ss_pred             eecccccc
Confidence            99997643

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=96.28  E-value=0.0032  Score=49.19  Aligned_cols=36  Identities=14%  Similarity=0.030  Sum_probs=32.6

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG   61 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   61 (294)
                      ..+||+|+|| |..|..++..|.++|++|+++.|++.
T Consensus         3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            3579999998 99999999999999999999998654

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=96.27  E-value=0.024  Score=36.93  Aligned_cols=72  Identities=17%  Similarity=0.253  Sum_probs=50.5

Q ss_pred             CCCCeEEEeCCCchHH-HHHHHHHHHCCCeEEEEecCCCCh-hhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCE
Q 043792           24 NATKTVCVMDASGHFA-SALVRRLLLRGYTVHAALHNHGKL-QCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        24 ~~~~~vlItGatG~iG-~~l~~~L~~~g~~V~~~~r~~~~~-~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~  101 (294)
                      .+.++|.++|. |.+| +.|++.|.++|++|.+.++..++. +.+.+        .++++..++-  ++    .+++.|.
T Consensus         6 ~~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~--------~Gi~v~~g~~--~~----~i~~~d~   70 (96)
T d1p3da1           6 RRVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQ--------AGAKIYIGHA--EE----HIEGASV   70 (96)
T ss_dssp             TTCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHH--------TTCEEEESCC--GG----GGTTCSE
T ss_pred             hhCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHH--------CCCeEEECCc--cc----cCCCCCE
Confidence            34678999887 4445 778999999999999999876543 33333        2667666553  22    2357899


Q ss_pred             EEecCCCCC
Q 043792          102 LFYSFEPPS  110 (294)
Q Consensus       102 Vih~a~~~~  110 (294)
                      ||...+.+.
T Consensus        71 vV~S~AI~~   79 (96)
T d1p3da1          71 VVVSSAIKD   79 (96)
T ss_dssp             EEECTTSCT
T ss_pred             EEECCCcCC
Confidence            999987655

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=96.24  E-value=0.0028  Score=51.46  Aligned_cols=36  Identities=22%  Similarity=0.332  Sum_probs=32.6

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG   61 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   61 (294)
                      ++|||+|+|| |+-|...+..|.++|++|.++.++..
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            3689999998 99999999999999999999988764

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=96.23  E-value=0.0039  Score=46.04  Aligned_cols=39  Identities=21%  Similarity=0.128  Sum_probs=34.4

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK   62 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   62 (294)
                      ....++|+|+|| |..|...+..|.++||+|+++.+.+..
T Consensus        40 ~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~~   78 (179)
T d1ps9a3          40 AVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSEI   78 (179)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred             CCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCcc
Confidence            345689999998 999999999999999999999987643

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.22  E-value=0.0098  Score=43.53  Aligned_cols=78  Identities=10%  Similarity=0.053  Sum_probs=49.5

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEE-EecCCCChhhHHHHHhhccCCCCeEEEECCCCCh-hHHHHHhc-cC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHA-ALHNHGKLQCIEEELINYNEEKKLKVFQADPFDY-HSLVNALK-GC   99 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~-~~~~~~~~-~~   99 (294)
                      ..++.+|+|.|+ |.+|...+..+...|.++++ .++++.+.+..++   +    .-..++..+-.|. +.++++.. ++
T Consensus        26 ~~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~---~----Ga~~~i~~~~~~~~~~i~~~t~gg~   97 (174)
T d1f8fa2          26 VTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ---L----GATHVINSKTQDPVAAIKEITDGGV   97 (174)
T ss_dssp             CCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH---H----TCSEEEETTTSCHHHHHHHHTTSCE
T ss_pred             CCCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHH---c----CCeEEEeCCCcCHHHHHHHHcCCCC
Confidence            345789999998 99999999999888876654 4556655555444   3    1123443322222 22333332 48


Q ss_pred             CEEEecCCC
Q 043792          100 SGLFYSFEP  108 (294)
Q Consensus       100 d~Vih~a~~  108 (294)
                      |+||.+.+.
T Consensus        98 D~vid~~G~  106 (174)
T d1f8fa2          98 NFALESTGS  106 (174)
T ss_dssp             EEEEECSCC
T ss_pred             cEEEEcCCc
Confidence            999999884

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=96.21  E-value=0.019  Score=38.79  Aligned_cols=75  Identities=9%  Similarity=0.137  Sum_probs=53.3

Q ss_pred             CCCeEEEeCCCc----------hHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHH
Q 043792           25 ATKTVCVMDASG----------HFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVN   94 (294)
Q Consensus        25 ~~~~vlItGatG----------~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~   94 (294)
                      ..+||||+|+..          +.+.+.++.|.+.|++++.+.-++.....         ..+-..-+...-...+.+.+
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVst---------d~d~aD~lYfeplt~e~v~~   73 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVST---------DYDTSDRLYFEPVTLEDVLE   73 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTT---------STTSSSEEECCCCSHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhc---------ChhhcCceEEccCCHHHHHH
Confidence            458999999843          78999999999999999999888765321         11223334444456677777


Q ss_pred             Hhc--cCCEEEecCCC
Q 043792           95 ALK--GCSGLFYSFEP  108 (294)
Q Consensus        95 ~~~--~~d~Vih~a~~  108 (294)
                      .++  +.|.|+-..|.
T Consensus        74 Ii~~E~p~~ii~~~GG   89 (121)
T d1a9xa4          74 IVRIEKPKGVIVQYGG   89 (121)
T ss_dssp             HHHHHCCSEEECSSST
T ss_pred             HHHHhCCCEEEeehhh
Confidence            764  68888877663

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=96.20  E-value=0.004  Score=46.86  Aligned_cols=66  Identities=23%  Similarity=0.158  Sum_probs=48.5

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ...+++|.|.|. |-||+.+++.|..-|.+|+++++......           ....        +..++.++++.+|+|
T Consensus        42 ~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~-----------~~~~--------~~~~l~~l~~~~D~v  101 (199)
T d1dxya1          42 ELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMKGD-----------HPDF--------DYVSLEDLFKQSDVI  101 (199)
T ss_dssp             CGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSSC-----------CTTC--------EECCHHHHHHHCSEE
T ss_pred             cccceeeeeeec-ccccccccccccccceeeeccCCccchhh-----------hcch--------hHHHHHHHHHhcccc
Confidence            345789999997 99999999999999999999998654311           0111        123477778888988


Q ss_pred             EecCCC
Q 043792          103 FYSFEP  108 (294)
Q Consensus       103 ih~a~~  108 (294)
                      +.+...
T Consensus       102 ~~~~pl  107 (199)
T d1dxya1         102 DLHVPG  107 (199)
T ss_dssp             EECCCC
T ss_pred             eeeecc
Confidence            776543

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=96.18  E-value=0.00077  Score=49.67  Aligned_cols=115  Identities=11%  Similarity=0.012  Sum_probs=66.2

Q ss_pred             CCeEEEeCCCchHHHH--HHHHHHHC----CCeEEEEecCCCChhhHHHHHh--hccCCCCeEEEECCCCChhHHHHHhc
Q 043792           26 TKTVCVMDASGHFASA--LVRRLLLR----GYTVHAALHNHGKLQCIEEELI--NYNEEKKLKVFQADPFDYHSLVNALK   97 (294)
Q Consensus        26 ~~~vlItGatG~iG~~--l~~~L~~~----g~~V~~~~r~~~~~~~l~~~~~--~~~~~~~v~~~~~Dl~~~~~~~~~~~   97 (294)
                      .|||.|+|| |.+|..  ++..|+..    +.++..+++++++.+.....+.  ........++...     .+.+++++
T Consensus         2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~-----td~~eaL~   75 (171)
T d1obba1           2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT-----MNLDDVII   75 (171)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE-----SCHHHHHT
T ss_pred             CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe-----CChhhccc
Confidence            479999998 888864  44555543    4589999998765543221110  1112223333322     23667889


Q ss_pred             cCCEEEecCCCCCCCCcchh--------------------------hhHhHhhHHHHHHHHHHHhcCCCc-EEEEec
Q 043792           98 GCSGLFYSFEPPSDHSTYDE--------------------------LTAEVETMAAHNVLEACAQTNTVD-KVVFTS  147 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~~~~~--------------------------~~~~~n~~~~~~ll~~~~~~~~~~-~~v~~S  147 (294)
                      ++|+|+..++..........                          ....-|+.-...+++.+++. +.+ .++.+|
T Consensus        76 dad~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~-~p~a~~i~~T  151 (171)
T d1obba1          76 DADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKL-SPKAWYLQAA  151 (171)
T ss_dssp             TCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHH-CTTCEEEECS
T ss_pred             CCCeEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHH-CcCeEEEEEC
Confidence            99999999765431100000                          01234778888888888887 433 344433

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.15  E-value=0.0059  Score=44.94  Aligned_cols=79  Identities=6%  Similarity=0.005  Sum_probs=45.6

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCChhhHHHHHhhccCCCCeEE--------EECCCCChhHHHHHh
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEEELINYNEEKKLKV--------FQADPFDYHSLVNAL   96 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~--------~~~Dl~~~~~~~~~~   96 (294)
                      |-||.|-| .|.||+.++|.|.+++ .+|+++............ + .  ....+..        ....+.-...+..++
T Consensus         1 MIKVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~-~-~--~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~   75 (178)
T d1b7go1           1 MVNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIA-H-R--RGIRIYVPQQSIKKFEESGIPVAGTVEDLI   75 (178)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHH-H-H--TTCCEECCGGGHHHHHTTTCCCCCCHHHHH
T ss_pred             CeEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHh-c-c--cCcceeccCccceeccccceecCCchhhhh
Confidence            46899999 5999999999999874 788877543222221111 0 1  0000000        001111122355556


Q ss_pred             ccCCEEEecCCCC
Q 043792           97 KGCSGLFYSFEPP  109 (294)
Q Consensus        97 ~~~d~Vih~a~~~  109 (294)
                      .++|+||-|-+..
T Consensus        76 ~~vDiViecTG~f   88 (178)
T d1b7go1          76 KTSDIVVDTTPNG   88 (178)
T ss_dssp             HHCSEEEECCSTT
T ss_pred             hcCCEEEECCCCc
Confidence            7899999998853

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=96.13  E-value=0.0059  Score=41.78  Aligned_cols=36  Identities=14%  Similarity=0.024  Sum_probs=32.6

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG   61 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   61 (294)
                      +.++|+|.|| |++|..++..|.+.|.+|.++.|.+.
T Consensus        21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            4689999998 99999999999999999999998754

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=96.11  E-value=0.01  Score=40.96  Aligned_cols=91  Identities=10%  Similarity=0.118  Sum_probs=57.7

Q ss_pred             CeEEEeCCCchHHHHHHHHHHH-CCCeEEEEec-CCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc-cCCEEE
Q 043792           27 KTVCVMDASGHFASALVRRLLL-RGYTVHAALH-NHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK-GCSGLF  103 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r-~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-~~d~Vi  103 (294)
                      .+|+|.|| |.+|+.|++++.. .+++++++.. ++++....         -.++.++..     +.+.+..+ .++.++
T Consensus         4 ~~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G~~---------I~Gi~V~~~-----~~l~~~~~~~i~iai   68 (126)
T d2dt5a2           4 WGLCIVGM-GRLGSALADYPGFGESFELRGFFDVDPEKVGRP---------VRGGVIEHV-----DLLPQRVPGRIEIAL   68 (126)
T ss_dssp             EEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCE---------ETTEEEEEG-----GGHHHHSTTTCCEEE
T ss_pred             ceEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeCchHhcCCE---------ECCEEEecH-----HHHHHHHhhcccEEE
Confidence            48999998 9999999998754 4789888854 44433221         125666533     34555554 345545


Q ss_pred             ecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCc
Q 043792          104 YSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSL  149 (294)
Q Consensus       104 h~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~  149 (294)
                      -+...                ...+.+++.|.+. +++.+..++..
T Consensus        69 ~~i~~----------------~~~~~I~d~l~~~-gIk~I~~f~~~   97 (126)
T d2dt5a2          69 LTVPR----------------EAAQKAADLLVAA-GIKGILNFAPV   97 (126)
T ss_dssp             ECSCH----------------HHHHHHHHHHHHH-TCCEEEECSSS
T ss_pred             EeCCH----------------HHHHHHHHHHHHc-CCCEEeecCce
Confidence            44331                1234577777777 89888877654

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=96.11  E-value=0.003  Score=43.63  Aligned_cols=36  Identities=17%  Similarity=0.063  Sum_probs=32.7

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK   62 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   62 (294)
                      .++++|+|| |+||-.++..|.+.|.+|+++.|++..
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~~   60 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASEI   60 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcccc
Confidence            479999998 999999999999999999999987643

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.09  E-value=0.0094  Score=43.52  Aligned_cols=77  Identities=17%  Similarity=0.069  Sum_probs=49.6

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCC
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCS  100 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d  100 (294)
                      .++.+|+|.|+ |.+|...+..+...|. .|+++++++++.+..++   .    ....++..+-.+.+...+...  ++|
T Consensus        31 ~~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~---~----ga~~~i~~~~~~~~~~~~~~~~~g~d  102 (172)
T d1h2ba2          31 YPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER---L----GADHVVDARRDPVKQVMELTRGRGVN  102 (172)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH---T----TCSEEEETTSCHHHHHHHHTTTCCEE
T ss_pred             CCCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhh---c----ccceeecCcccHHHHHHHhhCCCCce
Confidence            45678999986 9999999999988885 56666777665555554   2    122344333222233333332  479


Q ss_pred             EEEecCCC
Q 043792          101 GLFYSFEP  108 (294)
Q Consensus       101 ~Vih~a~~  108 (294)
                      +||.+.+.
T Consensus       103 ~vid~~g~  110 (172)
T d1h2ba2         103 VAMDFVGS  110 (172)
T ss_dssp             EEEESSCC
T ss_pred             EEEEecCc
Confidence            99999884

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.08  E-value=0.019  Score=41.66  Aligned_cols=38  Identities=18%  Similarity=0.142  Sum_probs=34.3

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNH   60 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   60 (294)
                      ...+++|+|.|-+..+|+.++..|+++|..|+.+....
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t   73 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT   73 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             ccccceEEEEecCCccchHHHHHHHhccCceEEEeccc
Confidence            56789999999999999999999999999999876654

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.06  E-value=0.0035  Score=46.64  Aligned_cols=36  Identities=14%  Similarity=0.154  Sum_probs=32.2

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGK   62 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~   62 (294)
                      ++||+|+|| |..|...+..|.++|+ +|+++.|+...
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~~   40 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEYV   40 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCcc
Confidence            589999998 9999999999999998 59999987654

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=96.05  E-value=0.0038  Score=43.17  Aligned_cols=35  Identities=9%  Similarity=0.085  Sum_probs=32.0

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG   61 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   61 (294)
                      .++++|.|| |+||-.++..|.+.|.+|+++.+.+.
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~   60 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDG   60 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeecc
Confidence            479999998 99999999999999999999988653

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.04  E-value=0.0085  Score=44.54  Aligned_cols=66  Identities=12%  Similarity=-0.025  Sum_probs=48.4

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      ..+++|.|.|- |.||+.+++.|..-|.+|++.++......            ...       ...+.++++++.+|+|+
T Consensus        42 l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~------------~~~-------~~~~~l~ell~~sDii~  101 (188)
T d1sc6a1          42 ARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENKLPL------------GNA-------TQVQHLSDLLNMSDVVS  101 (188)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCCCC------------TTC-------EECSCHHHHHHHCSEEE
T ss_pred             ccceEEEEeec-ccchhhhhhhcccccceEeeccccccchh------------hhh-------hhhhhHHHHHhhcccee
Confidence            45789999986 99999999999999999999987643211            011       11135778888899887


Q ss_pred             ecCCCC
Q 043792          104 YSFEPP  109 (294)
Q Consensus       104 h~a~~~  109 (294)
                      -+....
T Consensus       102 i~~plt  107 (188)
T d1sc6a1         102 LHVPEN  107 (188)
T ss_dssp             ECCCSS
T ss_pred             ecccCC
Confidence            765543

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=96.02  E-value=0.019  Score=39.29  Aligned_cols=74  Identities=11%  Similarity=0.167  Sum_probs=54.4

Q ss_pred             CCCeEEEeCCC----------chHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHH
Q 043792           25 ATKTVCVMDAS----------GHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVN   94 (294)
Q Consensus        25 ~~~~vlItGat----------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~   94 (294)
                      ..+||||+|+.          -+.+.+.++.|.+.|++++.+.-++.....-.         +-.+-+...-...+.+.+
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~---------d~aD~lYfePlt~e~v~~   76 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDP---------EMADATYIEPIHWEVVRK   76 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCG---------GGSSEEECSCCCHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcCh---------hhcceeeeecCCHHHHHH
Confidence            45899999994          47899999999999999999988876543211         122334445556677888


Q ss_pred             Hhc--cCCEEEecCC
Q 043792           95 ALK--GCSGLFYSFE  107 (294)
Q Consensus        95 ~~~--~~d~Vih~a~  107 (294)
                      .++  +.|.|+-..|
T Consensus        77 Ii~~E~pd~il~~~G   91 (127)
T d1a9xa3          77 IIEKERPDAVLPTMG   91 (127)
T ss_dssp             HHHHHCCSEEECSSS
T ss_pred             HHHHhCcCCeEEEee
Confidence            875  6899988776

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=95.90  E-value=0.0011  Score=48.53  Aligned_cols=117  Identities=8%  Similarity=0.001  Sum_probs=63.5

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHC-----CCeEEEEecCCCChhhHHHHHhh--ccCCCCeEEEECCCCChhHHHHHhc
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLR-----GYTVHAALHNHGKLQCIEEELIN--YNEEKKLKVFQADPFDYHSLVNALK   97 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~-----g~~V~~~~r~~~~~~~l~~~~~~--~~~~~~v~~~~~Dl~~~~~~~~~~~   97 (294)
                      +..||.|+||++.-...++..|+.+     +-++..++.++++.+.....+..  .......++...     .+..++++
T Consensus         2 k~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~eal~   76 (167)
T d1u8xx1           2 KSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT-----TDPEEAFT   76 (167)
T ss_dssp             CCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE-----SCHHHHHS
T ss_pred             CCceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec-----CChhhccC
Confidence            3468999999544333455555543     23788888887665432221101  111223333322     13567889


Q ss_pred             cCCEEEecCCCCCCCCcchhhhHhH--------------------hhHHHHHHHHHHHhcCCCc-EEEEec
Q 043792           98 GCSGLFYSFEPPSDHSTYDELTAEV--------------------ETMAAHNVLEACAQTNTVD-KVVFTS  147 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~~~~~~~~~~--------------------n~~~~~~ll~~~~~~~~~~-~~v~~S  147 (294)
                      ++|+||..++.........++.+..                    |+.-...+++.+.+. +.. .++.+|
T Consensus        77 ~AD~Vvitag~~~~~g~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~-~P~A~li~~T  146 (167)
T d1u8xx1          77 DVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKY-SPDAWMLNYS  146 (167)
T ss_dssp             SCSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECC
T ss_pred             CCCEEEECCCcCCCCceeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhh-CCCeEEEEeC
Confidence            9999999998865432222232222                    345556667766666 332 455444

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=95.85  E-value=0.0043  Score=48.86  Aligned_cols=31  Identities=16%  Similarity=0.100  Sum_probs=29.3

Q ss_pred             EEEeCCCchHHHHHHHHHHHCCCeEEEEecCC
Q 043792           29 VCVMDASGHFASALVRRLLLRGYTVHAALHNH   60 (294)
Q Consensus        29 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   60 (294)
                      |+|+|| |..|..++.+|+++|++|+++.+..
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            999998 9999999999999999999999864

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.81  E-value=0.034  Score=40.33  Aligned_cols=80  Identities=16%  Similarity=0.071  Sum_probs=54.6

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeE---EEECCC--CChhHHHHHhc
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLK---VFQADP--FDYHSLVNALK   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~---~~~~Dl--~~~~~~~~~~~   97 (294)
                      ...+|+|+|.|-|.-+|+.++..|+++|..|+.+..+....         ......+.   ....|+  ...+.+++...
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~   96 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQK---------FTRGESLKLNKHHVEDLGEYSEDLLKKCSL   96 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEE---------EESCCCSSCCCCEEEEEEECCHHHHHHHHH
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccc---------cccccceeeeeeccccccccchhHHhhccc
Confidence            56789999999999999999999999999998776442110         00000000   001111  34566888888


Q ss_pred             cCCEEEecCCCCCC
Q 043792           98 GCSGLFYSFEPPSD  111 (294)
Q Consensus        98 ~~d~Vih~a~~~~~  111 (294)
                      .+|+||..++.+..
T Consensus        97 ~aDIvIsavG~p~~  110 (171)
T d1edza1          97 DSDVVITGVPSENY  110 (171)
T ss_dssp             HCSEEEECCCCTTC
T ss_pred             cCCEEEEccCCCcc
Confidence            99999999887653

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=95.75  E-value=0.0035  Score=50.68  Aligned_cols=37  Identities=19%  Similarity=0.139  Sum_probs=32.8

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNH   60 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   60 (294)
                      ....++|+|+|| |..|...+.+|.++|++|.++.++.
T Consensus        27 ~~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          27 TSNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             CSSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            344579999998 9999999999999999999998765

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=95.75  E-value=0.019  Score=40.80  Aligned_cols=35  Identities=26%  Similarity=0.333  Sum_probs=30.1

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHC--CCeEEEEecCC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLR--GYTVHAALHNH   60 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~   60 (294)
                      +++|.|.|+||-||....+.+.+.  .++|.+++=..
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~   38 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR   38 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC
Confidence            589999999999999999999885  48898886543

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.66  E-value=0.11  Score=39.88  Aligned_cols=80  Identities=11%  Similarity=0.130  Sum_probs=50.0

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCCh-------------------hhHHHHHhhccCCCCeEEEEC
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKL-------------------QCIEEELINYNEEKKLKVFQA   84 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-------------------~~l~~~~~~~~~~~~v~~~~~   84 (294)
                      +..+|+|.|+ |.+|++++..|...|. ++++++.+.-..                   +.+.+.+  ...++.+++...
T Consensus        29 ~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l--~~~np~~~i~~~  105 (247)
T d1jw9b_          29 KDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDAL--TRINPHIAITPV  105 (247)
T ss_dssp             HHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHH--HHHCTTSEEEEE
T ss_pred             hCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHH--HHhhcccchhhh
Confidence            3579999997 8899999999999995 566666432111                   1122211  112344444433


Q ss_pred             CC-CChhHHHHHhccCCEEEecCC
Q 043792           85 DP-FDYHSLVNALKGCSGLFYSFE  107 (294)
Q Consensus        85 Dl-~~~~~~~~~~~~~d~Vih~a~  107 (294)
                      +. .+.+.....+...|+||.+..
T Consensus       106 ~~~~~~~~~~~~~~~~divid~~d  129 (247)
T d1jw9b_         106 NALLDDAELAALIAEHDLVLDCTD  129 (247)
T ss_dssp             CSCCCHHHHHHHHHTSSEEEECCS
T ss_pred             hhhhhhccccccccccceeeeccc
Confidence            32 244556677788899998754

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=95.65  E-value=0.006  Score=48.49  Aligned_cols=34  Identities=26%  Similarity=0.271  Sum_probs=31.2

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNH   60 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   60 (294)
                      .|||+|+|| |.-|...+.+|.+.|++|+++.+++
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            379999998 9999999999999999999998764

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.64  E-value=0.0047  Score=44.15  Aligned_cols=35  Identities=11%  Similarity=0.217  Sum_probs=31.8

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecC
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHN   59 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   59 (294)
                      .++++|||+|| |.+|..-++.|++.|.+|++++..
T Consensus        11 l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          11 LKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            45799999998 999999999999999999999754

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=95.62  E-value=0.013  Score=44.96  Aligned_cols=39  Identities=28%  Similarity=0.363  Sum_probs=34.5

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK   62 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   62 (294)
                      ....++|+|+|| |+.|...+..|.++|++|+++.++...
T Consensus        46 ~~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~~   84 (233)
T d1djqa3          46 TKNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEKI   84 (233)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             ccCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeecccc
Confidence            446789999998 999999999999999999999876644

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.59  E-value=0.065  Score=38.87  Aligned_cols=78  Identities=10%  Similarity=-0.018  Sum_probs=47.7

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEec-CCCChhhHHHHHhhccCCCCeEEEECCCC-----------ChhH
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRG-YTVHAALH-NHGKLQCIEEELINYNEEKKLKVFQADPF-----------DYHS   91 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r-~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~-----------~~~~   91 (294)
                      |.+||.|-|- |-||+.+++.|.+++ .+|.++.. ++.........  .     +...+..+-.           ....
T Consensus         1 M~irIaINGf-GRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~~   72 (172)
T d2czca2           1 MKVKVGVNGY-GTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKE--L-----GIPVYAASEEFIPRFEKEGFEVAGT   72 (172)
T ss_dssp             CCEEEEEECC-SHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHH--T-----TCCEEESSGGGHHHHHHHTCCCSCB
T ss_pred             CcEEEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhh--c-----CceeecccccceeeecccCccccch
Confidence            3579999996 999999999998864 67776643 33222111110  1     2333333221           1224


Q ss_pred             HHHHhccCCEEEecCCCCC
Q 043792           92 LVNALKGCSGLFYSFEPPS  110 (294)
Q Consensus        92 ~~~~~~~~d~Vih~a~~~~  110 (294)
                      +..++.++|+||-|-|...
T Consensus        73 ~~~~~~~vDvViEcTG~f~   91 (172)
T d2czca2          73 LNDLLEKVDIIVDATPGGI   91 (172)
T ss_dssp             HHHHHTTCSEEEECCSTTH
T ss_pred             hhhhhccCCEEEECCCCCC
Confidence            5555668999999988643

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=95.54  E-value=0.0058  Score=48.41  Aligned_cols=33  Identities=21%  Similarity=0.164  Sum_probs=30.6

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNH   60 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   60 (294)
                      |+|+|+|| |..|...+.+|.++|++|+++.++.
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            68999998 9999999999999999999998764

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.53  E-value=0.021  Score=40.99  Aligned_cols=71  Identities=11%  Similarity=0.016  Sum_probs=51.8

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ...+|+++|.|- |.||+.+++.|...|.+|++...++.+  .++..      .        |-.....+.+++...|+|
T Consensus        21 ~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~--al~A~------~--------dG~~v~~~~~a~~~adiv   83 (163)
T d1li4a1          21 MIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPIN--ALQAA------M--------EGYEVTTMDEACQEGNIF   83 (163)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH--HHHHH------H--------TTCEECCHHHHTTTCSEE
T ss_pred             eecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccch--hHHhh------c--------CceEeeehhhhhhhccEE
Confidence            456799999995 999999999999999999999887633  23221      1        222223467778888999


Q ss_pred             EecCCCCC
Q 043792          103 FYSFEPPS  110 (294)
Q Consensus       103 ih~a~~~~  110 (294)
                      |-+-+...
T Consensus        84 vtaTGn~~   91 (163)
T d1li4a1          84 VTTTGCID   91 (163)
T ss_dssp             EECSSCSC
T ss_pred             EecCCCcc
Confidence            88877544

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=95.51  E-value=0.008  Score=43.77  Aligned_cols=34  Identities=18%  Similarity=0.154  Sum_probs=29.5

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCC--eEEEEecCC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGY--TVHAALHNH   60 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~   60 (294)
                      +|||+|.|| |++|-.++..|.+.+.  +|+++.+++
T Consensus         2 gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            689999998 9999999999999874  778877654

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=95.44  E-value=0.0083  Score=42.71  Aligned_cols=35  Identities=11%  Similarity=0.248  Sum_probs=30.0

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHC--CCeEEEEecCC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLR--GYTVHAALHNH   60 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~   60 (294)
                      |++|.|.|+||-||....+-+.+.  .++|.+++=..
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~   37 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK   37 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence            678999999999999999999886  48888886543

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=95.34  E-value=0.013  Score=42.73  Aligned_cols=32  Identities=6%  Similarity=0.195  Sum_probs=26.2

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHC-CCeEEEEec
Q 043792           26 TKTVCVMDASGHFASALVRRLLLR-GYTVHAALH   58 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r   58 (294)
                      ++||.|.|. |.+|+.+++.|.+. +.+++++..
T Consensus         3 kirvgiiG~-G~ig~~~~~~l~~~~~~elvav~~   35 (170)
T d1f06a1           3 NIRVAIVGY-GNLGRSVEKLIAKQPDMDLVGIFS   35 (170)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHTTCSSEEEEEEEE
T ss_pred             cceEEEECC-hHHHHHHHHHHHhCCCcEEEEEEe
Confidence            468999995 99999999999875 677776644

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.34  E-value=0.022  Score=47.93  Aligned_cols=79  Identities=16%  Similarity=0.199  Sum_probs=50.7

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCCh-------------------hhHHHHHhhccCCCCeEEEECC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKL-------------------QCIEEELINYNEEKKLKVFQAD   85 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-------------------~~l~~~~~~~~~~~~v~~~~~D   85 (294)
                      ..||||.|+ |.+|+++++.|+..|. ++.+++.+.-..                   +.+.+.+......-++..+..+
T Consensus        37 ~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~  115 (426)
T d1yovb1          37 TCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNK  115 (426)
T ss_dssp             HCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEECSC
T ss_pred             cCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeeecc
Confidence            468999999 6799999999999996 677777643211                   1112211111223345566666


Q ss_pred             CCChhHHHHHhccCCEEEecCC
Q 043792           86 PFDYHSLVNALKGCSGLFYSFE  107 (294)
Q Consensus        86 l~~~~~~~~~~~~~d~Vih~a~  107 (294)
                      +.+..  .++++++|+||.+.-
T Consensus       116 i~~~~--~~~~~~~DlVi~~~D  135 (426)
T d1yovb1         116 IQDFN--DTFYRQFHIIVCGLD  135 (426)
T ss_dssp             GGGBC--HHHHTTCSEEEECCS
T ss_pred             ccchH--HHHHHhcchheeccC
Confidence            65433  357889999998755

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=95.28  E-value=0.02  Score=40.84  Aligned_cols=38  Identities=21%  Similarity=0.204  Sum_probs=30.9

Q ss_pred             CCCeEEEe-CCCchHHHHHHHHHHHCCCeEEEEecCCCC
Q 043792           25 ATKTVCVM-DASGHFASALVRRLLLRGYTVHAALHNHGK   62 (294)
Q Consensus        25 ~~~~vlIt-GatG~iG~~l~~~L~~~g~~V~~~~r~~~~   62 (294)
                      ..+.++|. .++||+|..++..|.++|.+|+++.+.+..
T Consensus        38 ~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~~   76 (156)
T d1djqa2          38 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHLA   76 (156)
T ss_dssp             CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCTT
T ss_pred             cCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc
Confidence            35666665 244999999999999999999999987644

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=95.22  E-value=0.062  Score=42.36  Aligned_cols=36  Identities=22%  Similarity=0.102  Sum_probs=32.1

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHN   59 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   59 (294)
                      +..+++|+|-|- |-+|+++++.|.+.|.+|++++.+
T Consensus        33 ~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD~   68 (293)
T d1hwxa1          33 GFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGES   68 (293)
T ss_dssp             SSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEcc
Confidence            456789999997 999999999999999999998753

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=95.20  E-value=0.032  Score=40.57  Aligned_cols=77  Identities=14%  Similarity=0.069  Sum_probs=50.2

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCChhhHHHHHhhccCCCCeE-EEEC-CCCC-hhHHHHHh--
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEEELINYNEEKKLK-VFQA-DPFD-YHSLVNAL--   96 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~-~~~~-Dl~~-~~~~~~~~--   96 (294)
                      -.++.+|+|+|+ |.+|...+..+...| .+|+++++++++.+..++   +     +.+ ++.. +-.+ .+......  
T Consensus        26 ~k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~---~-----GAd~~in~~~~~~~~~~~~~~~~~   96 (175)
T d1cdoa2          26 VEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV---F-----GATDFVNPNDHSEPISQVLSKMTN   96 (175)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH---T-----TCCEEECGGGCSSCHHHHHHHHHT
T ss_pred             CCCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHH---c-----CCcEEEcCCCcchhHHHHHHhhcc
Confidence            456789999997 667888888887876 568888888877766665   3     333 3221 1111 13333333  


Q ss_pred             ccCCEEEecCCC
Q 043792           97 KGCSGLFYSFEP  108 (294)
Q Consensus        97 ~~~d~Vih~a~~  108 (294)
                      .++|+||.+.+.
T Consensus        97 ~G~d~vid~~G~  108 (175)
T d1cdoa2          97 GGVDFSLECVGN  108 (175)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCcceeeeecCC
Confidence            258999999985

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.16  E-value=0.021  Score=43.64  Aligned_cols=73  Identities=16%  Similarity=0.073  Sum_probs=51.1

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      +..+++|+|-|- |-+|+++++.|.+.|.+|++.+.+....+.+..+   .    +...+     +.+++  +-.+||++
T Consensus        36 ~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~---~----g~~~~-----~~~~~--~~~~cDIl  100 (230)
T d1leha1          36 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE---E----GADAV-----APNAI--YGVTCDIF  100 (230)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH---H----CCEEC-----CGGGT--TTCCCSEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHh---c----CCccc-----CCccc--ccccccEe
Confidence            567899999997 9999999999999999999987765544444431   1    22221     22211  12379999


Q ss_pred             EecCCCCC
Q 043792          103 FYSFEPPS  110 (294)
Q Consensus       103 ih~a~~~~  110 (294)
                      +-||....
T Consensus       101 ~PcA~~~~  108 (230)
T d1leha1         101 APCALGAV  108 (230)
T ss_dssp             EECSCSCC
T ss_pred             cccccccc
Confidence            99987644

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=95.09  E-value=0.0082  Score=48.12  Aligned_cols=35  Identities=11%  Similarity=0.082  Sum_probs=31.5

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG   61 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   61 (294)
                      |..|+|+|| |+-|..+++.|+++|++|.++.++..
T Consensus         1 M~dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~~   35 (298)
T d1i8ta1           1 MYDYIIVGS-GLFGAVCANELKKLNKKVLVIEKRNH   35 (298)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred             CccEEEECC-cHHHHHHHHHHHhCCCcEEEEECCCC
Confidence            467999998 99999999999999999999987654

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=95.07  E-value=0.014  Score=47.48  Aligned_cols=36  Identities=14%  Similarity=0.156  Sum_probs=31.6

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCC--CeEEEEecCCC
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRG--YTVHAALHNHG   61 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~   61 (294)
                      .+|+|+|+|| |.-|...+..|+++|  ++|+++.|+.+
T Consensus         3 ~~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           3 TIRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            4689999998 999999999999876  69999988754

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=95.00  E-value=0.015  Score=42.51  Aligned_cols=35  Identities=17%  Similarity=0.217  Sum_probs=29.9

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNH   60 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   60 (294)
                      .+++|+|.|| |++|-.++..|.+.|.+|.++.+..
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~~   36 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVGD   36 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEEEecC
Confidence            3578999998 9999999999999998877765544

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.99  E-value=0.0098  Score=47.15  Aligned_cols=33  Identities=18%  Similarity=0.096  Sum_probs=30.8

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNH   60 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   60 (294)
                      .+|+|.|| |..|..++..|.+.|++|.++.+++
T Consensus         3 ~~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~   35 (292)
T d1k0ia1           3 TQVAIIGA-GPSGLLLGQLLHKAGIDNVILERQT   35 (292)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            47999998 9999999999999999999998875

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=94.98  E-value=0.0075  Score=40.33  Aligned_cols=38  Identities=21%  Similarity=0.051  Sum_probs=31.6

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG   61 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   61 (294)
                      ...+|+|+|.|+ |.-|.-++..|.+.+.+|+...|+..
T Consensus        29 ~f~gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          29 LFVGESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             GGTTCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             hcCCCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecCc
Confidence            356899999997 89999999999998878777766543

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.91  E-value=0.087  Score=38.03  Aligned_cols=114  Identities=6%  Similarity=0.008  Sum_probs=61.0

Q ss_pred             CCeEEEeCCC-chHHHHHHHHHHHCC----CeEEEEecCCCCh--hhHHH--HHhhccCCCCeEEEECCCCChhHHHHHh
Q 043792           26 TKTVCVMDAS-GHFASALVRRLLLRG----YTVHAALHNHGKL--QCIEE--ELINYNEEKKLKVFQADPFDYHSLVNAL   96 (294)
Q Consensus        26 ~~~vlItGat-G~iG~~l~~~L~~~g----~~V~~~~r~~~~~--~~l~~--~~~~~~~~~~v~~~~~Dl~~~~~~~~~~   96 (294)
                      ++||.|+||+ .+.+..++..+....    -++..++.+++..  +.+..  ...........++...  +   +..+.+
T Consensus         1 k~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~--t---d~~~al   75 (169)
T d1s6ya1           1 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLT--L---DRRRAL   75 (169)
T ss_dssp             CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEE--S---CHHHHH
T ss_pred             CcEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeec--C---Cchhhc
Confidence            3789999983 244455555555432    3777778776542  21111  0001111222332221  2   245678


Q ss_pred             ccCCEEEecCCCCCCCCcchh--------------------hhHhHhhHHHHHHHHHHHhcCCCcEEEE
Q 043792           97 KGCSGLFYSFEPPSDHSTYDE--------------------LTAEVETMAAHNVLEACAQTNTVDKVVF  145 (294)
Q Consensus        97 ~~~d~Vih~a~~~~~~~~~~~--------------------~~~~~n~~~~~~ll~~~~~~~~~~~~v~  145 (294)
                      +++|+||..++..........                    ....-|+.....+++.+.+. +...++.
T Consensus        76 ~gaDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~-~pda~~i  143 (169)
T d1s6ya1          76 DGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEEL-CPDAWLI  143 (169)
T ss_dssp             TTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHH-CTTCEEE
T ss_pred             CCCCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhc-CCCeEEE
Confidence            899999999987652211111                    11235777778888888877 4444444

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=94.91  E-value=0.028  Score=38.00  Aligned_cols=83  Identities=17%  Similarity=0.360  Sum_probs=53.1

Q ss_pred             CeEEEeCCC---chHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           27 KTVCVMDAS---GHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        27 ~~vlItGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      |+|.|.|+|   +-.|..+++.|++.||+|+.+..+.+..             .++..+ -+      +.++-..+|.++
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i-------------~G~~~y-~s------l~~lp~~~D~vv   61 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI-------------EGLKCY-RS------VRELPKDVDVIV   61 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE-------------TTEECB-SS------GGGSCTTCCEEE
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccc-------------cCcccc-cc------chhccccceEEE
Confidence            689999988   7799999999999999988875432211             022211 12      222223568877


Q ss_pred             ecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEe
Q 043792          104 YSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFT  146 (294)
Q Consensus       104 h~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~  146 (294)
                      -+...                ..+..+++.|.+. +++.+++-
T Consensus        62 i~vp~----------------~~~~~~l~~~~~~-g~k~v~~~   87 (116)
T d1y81a1          62 FVVPP----------------KVGLQVAKEAVEA-GFKKLWFQ   87 (116)
T ss_dssp             ECSCH----------------HHHHHHHHHHHHT-TCCEEEEC
T ss_pred             EEeCH----------------HHHHHHHHHHHhc-CCceEEec
Confidence            66442                2245677777777 88876543

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=94.82  E-value=0.09  Score=40.38  Aligned_cols=36  Identities=22%  Similarity=0.083  Sum_probs=32.0

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHN   59 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   59 (294)
                      +..+++|+|-|- |-+|+++++.|.+.|.+|++++..
T Consensus        28 ~l~g~~v~IqGf-GnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          28 GIEGKTVAIQGM-GNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEeecc
Confidence            456899999996 999999999999999999988753

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=94.81  E-value=0.067  Score=37.31  Aligned_cols=85  Identities=16%  Similarity=0.139  Sum_probs=55.3

Q ss_pred             CCeEEEeCCC---chHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           26 TKTVCVMDAS---GHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        26 ~~~vlItGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      .++|.|.|+|   +-.|..+++.|.+.||+|+.+..+....             .+... .-++      .++-..+|.|
T Consensus        19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i-------------~G~~~-~~sl------~dlp~~iD~v   78 (139)
T d2d59a1          19 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEV-------------LGRKC-YPSV------LDIPDKIEVV   78 (139)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE-------------TTEEC-BSSG------GGCSSCCSEE
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCccccc-------------CCCcc-cccc------cccCccceEE
Confidence            4789999998   7899999999999999988876443211             01111 1122      2222356877


Q ss_pred             EecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEec
Q 043792          103 FYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTS  147 (294)
Q Consensus       103 ih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~S  147 (294)
                      +-+..+                .....+++.|.+. +++.+++..
T Consensus        79 ~i~vp~----------------~~~~~~~~e~~~~-g~k~v~~~~  106 (139)
T d2d59a1          79 DLFVKP----------------KLTMEYVEQAIKK-GAKVVWFQY  106 (139)
T ss_dssp             EECSCH----------------HHHHHHHHHHHHH-TCSEEEECT
T ss_pred             EEEeCH----------------HHHHHHHHHHHHh-CCCEEEEec
Confidence            766542                2355677777777 887666543

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.72  E-value=0.021  Score=45.86  Aligned_cols=36  Identities=22%  Similarity=0.187  Sum_probs=31.6

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNH   60 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   60 (294)
                      .+..||+|+|| |.-|...+..|.++|++|+++-.+.
T Consensus         3 ~~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~~   38 (449)
T d2dw4a2           3 KKTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEARD   38 (449)
T ss_dssp             SCCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            34578999998 9999999999999999999986543

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.64  E-value=0.018  Score=42.78  Aligned_cols=33  Identities=18%  Similarity=0.092  Sum_probs=28.5

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHC--CCeEEEEecCC
Q 043792           27 KTVCVMDASGHFASALVRRLLLR--GYTVHAALHNH   60 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~   60 (294)
                      |||+|.|| |++|-.++..|.+.  +.+|+++.|..
T Consensus         1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            78999998 99999999999886  46788888754

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=94.60  E-value=0.14  Score=36.91  Aligned_cols=77  Identities=9%  Similarity=0.039  Sum_probs=45.7

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECC-----------CCChhHHH
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQAD-----------PFDYHSLV   93 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~D-----------l~~~~~~~   93 (294)
                      |++|.|-| -|-||+.+++.|.+++ .+|.++......... ...++.     +.......           +.-...+.
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~~~~~-~~l~~~-----~~~~~~~~~~~~~~~~~~~~~v~g~~~   73 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRPDFEA-RMALKK-----GYDLYVAIPERVKLFEKAGIEVAGTVD   73 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSCSHHH-HHHHHT-----TCCEEESSGGGHHHHHHTTCCCCEEHH
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCcHHHH-HHHHhc-----CCceEecccccceeecccCcccCCChh
Confidence            67999998 5999999999998875 666666432222211 110101     12222221           11112345


Q ss_pred             HHhccCCEEEecCCCC
Q 043792           94 NALKGCSGLFYSFEPP  109 (294)
Q Consensus        94 ~~~~~~d~Vih~a~~~  109 (294)
                      .++.++|+||-|-|..
T Consensus        74 ~~~~~vDvViEcTG~f   89 (171)
T d1cf2o1          74 DMLDEADIVIDCTPEG   89 (171)
T ss_dssp             HHHHTCSEEEECCSTT
T ss_pred             HhhcCCCEEEEccCCC
Confidence            5567899999998864

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.42  E-value=0.02  Score=43.67  Aligned_cols=32  Identities=22%  Similarity=0.155  Sum_probs=29.5

Q ss_pred             EEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC
Q 043792           29 VCVMDASGHFASALVRRLLLRGYTVHAALHNHG   61 (294)
Q Consensus        29 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   61 (294)
                      |+|+|| |..|...+.+|+++|++|.++.++..
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~~   39 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQDH   39 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence            799997 99999999999999999999988753

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.17  E-value=0.0041  Score=47.82  Aligned_cols=27  Identities=22%  Similarity=0.117  Sum_probs=24.3

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEE
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVH   54 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~   54 (294)
                      |||+|+|| |.+|...+.+|+++|++|+
T Consensus         1 mkV~VIGa-Gi~GlstA~~L~~~G~~v~   27 (246)
T d1kifa1           1 MRVVVIGA-GVIGLSTALCIHERYHSVL   27 (246)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHHTTTS
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCCce
Confidence            68999998 9999999999999997643

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=94.08  E-value=0.026  Score=44.25  Aligned_cols=31  Identities=23%  Similarity=0.129  Sum_probs=29.0

Q ss_pred             EEEeCCCchHHHHHHHHHHHCCCeEEEEecCC
Q 043792           29 VCVMDASGHFASALVRRLLLRGYTVHAALHNH   60 (294)
Q Consensus        29 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   60 (294)
                      |+|+|| |..|..++.+|.++|++|+++.+..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            899998 9999999999999999999998854

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=94.05  E-value=0.22  Score=35.36  Aligned_cols=67  Identities=21%  Similarity=0.241  Sum_probs=42.2

Q ss_pred             CCeEEEeCCCchHHHH-HHHHHHHC-CCeEEEE-ecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           26 TKTVCVMDASGHFASA-LVRRLLLR-GYTVHAA-LHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        26 ~~~vlItGatG~iG~~-l~~~L~~~-g~~V~~~-~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ++||.|+|. |.+|+. ....|.+. +.+++++ +++++....+.+.+       ++     +..+  .+.++.+++|+|
T Consensus         1 Kiri~iIG~-G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~-------~~-----~~~~--~~~~l~~~~D~V   65 (164)
T d1tlta1           1 KLRIGVVGL-GGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESW-------RI-----PYAD--SLSSLAASCDAV   65 (164)
T ss_dssp             CEEEEEECC-STHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHH-------TC-----CBCS--SHHHHHTTCSEE
T ss_pred             CCEEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcc-------cc-----cccc--cchhhhhhcccc
Confidence            368999996 889975 46666554 6777765 56777666655521       22     1222  244456789998


Q ss_pred             EecCC
Q 043792          103 FYSFE  107 (294)
Q Consensus       103 ih~a~  107 (294)
                      +-+..
T Consensus        66 ~I~tp   70 (164)
T d1tlta1          66 FVHSS   70 (164)
T ss_dssp             EECSC
T ss_pred             ccccc
Confidence            86643

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=94.05  E-value=0.027  Score=44.76  Aligned_cols=33  Identities=18%  Similarity=0.399  Sum_probs=29.4

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGY-TVHAALHNH   60 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~   60 (294)
                      .+|+|+|| |.+|..++.+|+++|+ +|+++.|+.
T Consensus         2 ~dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           2 PRIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CCEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            36999998 9999999999999996 699998864

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.05  E-value=0.036  Score=43.12  Aligned_cols=34  Identities=15%  Similarity=0.026  Sum_probs=30.6

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHG   61 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~   61 (294)
                      ++|+|+|| |..|..++..|.+.|. +|.++.+++.
T Consensus         2 ~~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           2 IDILIAGA-GIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            68999998 9999999999999995 8999988764

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.04  E-value=0.015  Score=42.68  Aligned_cols=32  Identities=25%  Similarity=0.305  Sum_probs=26.9

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEec
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALH   58 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r   58 (294)
                      +.+|+|+|| |++|-.++..|.+.|.+|.++.+
T Consensus         3 ~a~VvIIGg-G~~G~e~A~~l~~~g~~v~i~~~   34 (183)
T d1d7ya1           3 KAPVVVLGA-GLASVSFVAELRQAGYQGLITVV   34 (183)
T ss_dssp             CSSEEEECC-SHHHHHHHHHHHHHTCCSCEEEE
T ss_pred             CCCEEEECc-cHHHHHHHHHHHhcCCceEEEEE
Confidence            457999997 99999999999999977666544

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=93.94  E-value=0.27  Score=35.20  Aligned_cols=82  Identities=15%  Similarity=0.016  Sum_probs=50.3

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCC----Ce------------EEEECCCCChh
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEK----KL------------KVFQADPFDYH   90 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~----~v------------~~~~~Dl~~~~   90 (294)
                      |||.|=|= |-||+.+.|.|.+++.+|.++... ...+.+...++...-+.    .+            .+....-.+++
T Consensus         1 ikigINGf-GRIGR~~~R~l~~~~i~iv~INd~-~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~   78 (168)
T d2g82a1           1 MKVGINGF-GRIGRQVFRILHSRGVEVALINDL-TDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPK   78 (168)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECS-SCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGG
T ss_pred             CEEEEECC-cHHHHHHHHHHhcCCCEEEEECCC-cchhhhhheeecccccCccccccccccceeEecceeEEEEecCChH
Confidence            58899886 999999999999999999887653 45555554332321111    11            11112223444


Q ss_pred             HHHHHhccCCEEEecCCCCC
Q 043792           91 SLVNALKGCSGLFYSFEPPS  110 (294)
Q Consensus        91 ~~~~~~~~~d~Vih~a~~~~  110 (294)
                      ++.=.-.++|+|+-|-|...
T Consensus        79 ~i~W~~~gvdiViEcTG~f~   98 (168)
T d2g82a1          79 EIPWAEAGVGVVIESTGVFT   98 (168)
T ss_dssp             GCCTGGGTEEEEEECSSSCC
T ss_pred             HCcccccCCceeEecccccc
Confidence            33322236899999988655

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=93.83  E-value=0.033  Score=42.83  Aligned_cols=34  Identities=21%  Similarity=0.157  Sum_probs=29.9

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHG   61 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~   61 (294)
                      .+|+|+|| |..|...+..|.++|+ +|+++.++..
T Consensus         1 P~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~~   35 (347)
T d1b5qa1           1 PRVIVVGA-GMSGISAAKRLSEAGITDLLILEATDH   35 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSSS
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCCC
Confidence            37999998 9999999999999996 6999987653

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=93.81  E-value=0.048  Score=36.70  Aligned_cols=35  Identities=17%  Similarity=0.148  Sum_probs=29.4

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHH---CCCeEEEEecCCC
Q 043792           26 TKTVCVMDASGHFASALVRRLLL---RGYTVHAALHNHG   61 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~---~g~~V~~~~r~~~   61 (294)
                      .++++|.|| |++|-.++..|.+   .|.+|+++.|.+.
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~   55 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDM   55 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceeccccc
Confidence            479999998 9999999987655   4889999988754

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=93.52  E-value=0.077  Score=37.82  Aligned_cols=71  Identities=11%  Similarity=-0.019  Sum_probs=52.5

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      ...+|+++|.|= |.+|+-+++.|...|.+|+++..+|-.  .++.      ..++.++        ..+.++++..|+|
T Consensus        20 ~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~--alqA------~mdGf~v--------~~~~~a~~~aDi~   82 (163)
T d1v8ba1          20 LISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPIC--AIQA------VMEGFNV--------VTLDEIVDKGDFF   82 (163)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHH--HHHH------HTTTCEE--------CCHHHHTTTCSEE
T ss_pred             eecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchh--hHHH------HhcCCcc--------CchhHccccCcEE
Confidence            456799999998 999999999999999999998877632  2322      1223332        3456788888988


Q ss_pred             EecCCCCC
Q 043792          103 FYSFEPPS  110 (294)
Q Consensus       103 ih~a~~~~  110 (294)
                      |-+-+...
T Consensus        83 vTaTGn~~   90 (163)
T d1v8ba1          83 ITCTGNVD   90 (163)
T ss_dssp             EECCSSSS
T ss_pred             EEcCCCCc
Confidence            88877544

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=93.48  E-value=0.19  Score=37.31  Aligned_cols=76  Identities=13%  Similarity=0.168  Sum_probs=46.2

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCCh------hhHHHHHhhccCCCCeEEEE-CCCCChhHHHHHhc--
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKL------QCIEEELINYNEEKKLKVFQ-ADPFDYHSLVNALK--   97 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~------~~l~~~~~~~~~~~~v~~~~-~Dl~~~~~~~~~~~--   97 (294)
                      |||++.|. +-.|..+++.|++.|++|.++...+++.      ..+.+   .. ...++.++. .++.+++ +.+.++  
T Consensus         1 Mkiv~~~~-~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~---~a-~~~~i~~~~~~~~~~~~-~~~~i~~~   74 (203)
T d2blna2           1 MKTVVFAY-HDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVAR---LA-AERGIPVYAPDNVNHPL-WVERIAQL   74 (203)
T ss_dssp             CEEEEEEC-HHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHH---HH-HHHTCCEECCSCCCSHH-HHHHHHHT
T ss_pred             CeEEEEec-CHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHH---HH-HHcCCcceecccccchh-hhhhhhhh
Confidence            68899976 5579999999999999998775433221      11111   00 012455554 4555554 444444  


Q ss_pred             cCCEEEecCCC
Q 043792           98 GCSGLFYSFEP  108 (294)
Q Consensus        98 ~~d~Vih~a~~  108 (294)
                      ++|.+|.+...
T Consensus        75 ~~Dlii~~g~~   85 (203)
T d2blna2          75 SPDVIFSFYYR   85 (203)
T ss_dssp             CCSEEEEESCC
T ss_pred             cccceeeeecc
Confidence            67988887654

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=93.47  E-value=0.079  Score=37.77  Aligned_cols=72  Identities=13%  Similarity=0.084  Sum_probs=40.2

Q ss_pred             CCCeEEEeCCCchHHHHHH-HHHHHC-CCeEEEE-ecCCCChh-hHHHHHhhccCCCCeEEEECCCCChhHHHHH--hcc
Q 043792           25 ATKTVCVMDASGHFASALV-RRLLLR-GYTVHAA-LHNHGKLQ-CIEEELINYNEEKKLKVFQADPFDYHSLVNA--LKG   98 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~-~~L~~~-g~~V~~~-~r~~~~~~-~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~--~~~   98 (294)
                      ++.||.|.| +|.+|+.+. +.|... ..+++++ +|+.+... ...+.  .     ++.+...   ..+.+.+.  +.+
T Consensus         3 kkirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~--~-----~i~~~~~---~~d~l~~~~~~~~   71 (157)
T d1nvmb1           3 QKLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQR--M-----GVTTTYA---GVEGLIKLPEFAD   71 (157)
T ss_dssp             SCEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHH--T-----TCCEESS---HHHHHHHSGGGGG
T ss_pred             CCcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhh--c-----CCccccc---ceeeeeecccccc
Confidence            357999999 799998754 555444 4567776 55554332 22221  1     3333222   23344433  347


Q ss_pred             CCEEEecCC
Q 043792           99 CSGLFYSFE  107 (294)
Q Consensus        99 ~d~Vih~a~  107 (294)
                      +|+||.+-.
T Consensus        72 iDiVf~ATp   80 (157)
T d1nvmb1          72 IDFVFDATS   80 (157)
T ss_dssp             EEEEEECSC
T ss_pred             cCEEEEcCC
Confidence            899987643

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=93.44  E-value=0.042  Score=39.33  Aligned_cols=31  Identities=19%  Similarity=0.250  Sum_probs=26.8

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC
Q 043792           28 TVCVMDASGHFASALVRRLLLRGYTVHAALHNH   60 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   60 (294)
                      ||+|.|| |++|-.++..|. ++.+|+++.+.+
T Consensus         2 rVvIIGg-G~~G~e~A~~l~-~~~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVGN-GPGGFELAKQLS-QTYEVTVIDKEP   32 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred             eEEEECC-cHHHHHHHHHHH-cCCCEEEEeccc
Confidence            7999998 999999999885 578999998754

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=93.32  E-value=0.048  Score=36.74  Aligned_cols=35  Identities=9%  Similarity=0.096  Sum_probs=28.4

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHH---CCCeEEEEecCCC
Q 043792           26 TKTVCVMDASGHFASALVRRLLL---RGYTVHAALHNHG   61 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~---~g~~V~~~~r~~~   61 (294)
                      .++++|.|| |++|-.++..|..   +|.+|+++.|.+.
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~   57 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM   57 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence            479999998 9999999976665   4568999988653

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.31  E-value=0.051  Score=37.79  Aligned_cols=35  Identities=23%  Similarity=0.340  Sum_probs=29.2

Q ss_pred             CCeEEEeCCCchHHHHHHHHHH----HCCCeEEEEecCCC
Q 043792           26 TKTVCVMDASGHFASALVRRLL----LRGYTVHAALHNHG   61 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~----~~g~~V~~~~r~~~   61 (294)
                      .++++|.|| ||+|-.++..|.    +.|.+|+.+.+...
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~   75 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKG   75 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence            478999998 999999998885    35899999887653

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=93.04  E-value=0.56  Score=33.52  Aligned_cols=82  Identities=12%  Similarity=0.040  Sum_probs=49.6

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCC----CeE------------EEECCCCChhH
Q 043792           28 TVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEK----KLK------------VFQADPFDYHS   91 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~----~v~------------~~~~Dl~~~~~   91 (294)
                      ||.|-| =|-||+.+.|.+++++.+|.++.......+.+...++...-+.    .++            +....-.++++
T Consensus         2 kIgING-fGRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~~   80 (169)
T d1dssg1           2 KIGING-FGRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPEN   80 (169)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             eEEEEC-CcHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCChHH
Confidence            688888 4999999999999999988887654445555544332321111    111            11112234443


Q ss_pred             HHHHhccCCEEEecCCCCC
Q 043792           92 LVNALKGCSGLFYSFEPPS  110 (294)
Q Consensus        92 ~~~~~~~~d~Vih~a~~~~  110 (294)
                      +.=.-.++|+||-|-|...
T Consensus        81 i~W~~~gvD~ViEcTG~f~   99 (169)
T d1dssg1          81 IPWSKAGAEYIVESTGVFT   99 (169)
T ss_dssp             CCHHHHTCCEEEECSSSCC
T ss_pred             CCccccCCCEEEecCceEc
Confidence            3211226899999998765

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=92.95  E-value=0.057  Score=42.99  Aligned_cols=36  Identities=25%  Similarity=0.154  Sum_probs=32.2

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGK   62 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   62 (294)
                      ...|+|+|| |+.|...+..|.++|.+|+++.+.++.
T Consensus         7 ~~dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~~i   42 (298)
T d1w4xa1           7 EVDVLVVGA-GFSGLYALYRLRELGRSVHVIETAGDV   42 (298)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred             CCCEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCCCc
Confidence            457999998 999999999999999999999887653

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=92.91  E-value=0.019  Score=40.78  Aligned_cols=39  Identities=10%  Similarity=0.032  Sum_probs=27.6

Q ss_pred             EEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHH
Q 043792           29 VCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEE   68 (294)
Q Consensus        29 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~   68 (294)
                      |-++|+ |.+|+++++.|.+.++.+.+.+|++++.+.+.+
T Consensus         2 IgfIG~-G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~   40 (153)
T d2i76a2           2 LNFVGT-GTLTRFFLECLKDRYEIGYILSRSIDRARNLAE   40 (153)
T ss_dssp             CEEESC-CHHHHHHHHTTC----CCCEECSSHHHHHHHHH
T ss_pred             EEEEeC-cHHHHHHHHHHHhCCCEEEEEeCChhhhcchhh
Confidence            456775 999999999886654445678898888777766

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.83  E-value=0.21  Score=42.91  Aligned_cols=107  Identities=8%  Similarity=0.134  Sum_probs=61.6

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHh-----------------hccCCCCe--EEEECC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELI-----------------NYNEEKKL--KVFQAD   85 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~-----------------~~~~~~~v--~~~~~D   85 (294)
                      ..+|+|.|+ |.+|.++++.|...|. .+++++.+.-....+..++.                 +...++.+  +.+..+
T Consensus        25 ~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~~~~~  103 (529)
T d1yova1          25 SAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEES  103 (529)
T ss_dssp             HCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCEESSC
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEEEcCC
Confidence            468999998 7799999999999994 67777654333322221100                 11223333  333333


Q ss_pred             CCCh-hHHHHHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecCcc
Q 043792           86 PFDY-HSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLT  150 (294)
Q Consensus        86 l~~~-~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss~~  150 (294)
                      ..+. +...+++.++|+||.+...               ......+-+.|++. ++ .||..++.+
T Consensus       104 ~~~~~~~~~~~~~~~dvVv~~~~~---------------~~~~~~l~~~c~~~-~i-p~i~~~~~G  152 (529)
T d1yova1         104 PENLLDNDPSFFCRFTVVVATQLP---------------ESTSLRLADVLWNS-QI-PLLICRTYG  152 (529)
T ss_dssp             HHHHHHSCGGGGGGCSEEEEESCC---------------HHHHHHHHHHHHHH-TC-CEEEEEEET
T ss_pred             chhhhhhHHHHhcCCCEEEECCCC---------------HHHHHHHHHHHHHc-CC-CEEEEeccC
Confidence            2211 1112446678999876432               22334566777777 76 477777655

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.67  E-value=0.1  Score=37.33  Aligned_cols=77  Identities=14%  Similarity=0.141  Sum_probs=44.5

Q ss_pred             CeEEEeCCCchHHHHHHH-HHHHC-----CCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCC
Q 043792           27 KTVCVMDASGHFASALVR-RLLLR-----GYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCS  100 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~-~L~~~-----g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d  100 (294)
                      |||.|+|| |.+|...+- .|+..     ..++..++.++++.+.... +..........+...  +   +..+.++++|
T Consensus         1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d-~~~~~~~~~~~~~~t--~---~~~~~l~~aD   73 (162)
T d1up7a1           1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVD-FVKRLVKDRFKVLIS--D---TFEGAVVDAK   73 (162)
T ss_dssp             CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHH-HHHHHHTTSSEEEEC--S---SHHHHHTTCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHH-HHHhhhccCceEEEe--c---CcccccCCCC
Confidence            68999999 545655543 33321     3589999988765543222 100011123333322  1   2456788999


Q ss_pred             EEEecCCCCC
Q 043792          101 GLFYSFEPPS  110 (294)
Q Consensus       101 ~Vih~a~~~~  110 (294)
                      +||..++...
T Consensus        74 vVVita~~~~   83 (162)
T d1up7a1          74 YVIFQFRPGG   83 (162)
T ss_dssp             EEEECCCTTH
T ss_pred             EEEEecccCC
Confidence            9999998754

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.65  E-value=0.13  Score=39.12  Aligned_cols=83  Identities=14%  Similarity=0.127  Sum_probs=61.8

Q ss_pred             CCCCCeEEEeCC-CchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCE
Q 043792           23 SNATKTVCVMDA-SGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        23 ~~~~~~vlItGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~  101 (294)
                      ..++++||=.|+ +|..-++|++..-..| +|++++.++...+.+..   ......++..+..|..+++.+......+|+
T Consensus        71 i~pG~~VLDlGaGsG~~t~~la~~VG~~G-~V~aVD~s~~~l~~a~~---~a~~~~~~~~i~~d~~~~~~~~~~~~~vD~  146 (227)
T d1g8aa_          71 IKPGKSVLYLGIASGTTASHVSDIVGWEG-KIFGIEFSPRVLRELVP---IVEERRNIVPILGDATKPEEYRALVPKVDV  146 (227)
T ss_dssp             CCTTCEEEEETTTSTTHHHHHHHHHCTTS-EEEEEESCHHHHHHHHH---HHSSCTTEEEEECCTTCGGGGTTTCCCEEE
T ss_pred             cCCCCEEEEeccCCCHHHHHHHHHhCCCC-EEEEEeCcHHHHHHHHH---HHHhcCCceEEEEECCCcccccccccceEE
Confidence            345788888875 6777778877654555 89999999877766666   444556788999999998877766677899


Q ss_pred             EEecCCCC
Q 043792          102 LFYSFEPP  109 (294)
Q Consensus       102 Vih~a~~~  109 (294)
                      |++.....
T Consensus       147 i~~d~~~~  154 (227)
T d1g8aa_         147 IFEDVAQP  154 (227)
T ss_dssp             EEECCCST
T ss_pred             EEEEcccc
Confidence            98865543

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.54  E-value=0.074  Score=39.92  Aligned_cols=81  Identities=12%  Similarity=0.089  Sum_probs=58.2

Q ss_pred             CCCCCeEEEeCCC-chHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCE
Q 043792           23 SNATKTVCVMDAS-GHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        23 ~~~~~~vlItGat-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~  101 (294)
                      -.++++||=.|++ |..-++|++.. ..| +|++++.++...+.+.+   .....+++.++.+|..++......+..+|+
T Consensus        54 lkpg~~VLDlGcG~G~~~~~la~~v-~~g-~V~gvDis~~~i~~a~~---~a~~~~ni~~i~~d~~~~~~~~~~~~~vd~  128 (209)
T d1nt2a_          54 LRGDERVLYLGAASGTTVSHLADIV-DEG-IIYAVEYSAKPFEKLLE---LVRERNNIIPLLFDASKPWKYSGIVEKVDL  128 (209)
T ss_dssp             CCSSCEEEEETCTTSHHHHHHHHHT-TTS-EEEEECCCHHHHHHHHH---HHHHCSSEEEECSCTTCGGGTTTTCCCEEE
T ss_pred             CCCCCEEEEeCCcCCHHHHHHHHhc-cCC-eEEEEeCCHHHHHHHHH---HhhccCCceEEEeeccCccccccccceEEE
Confidence            3457899998864 55555555543 556 89999999877666655   333456899999999998877766777888


Q ss_pred             EEecCCC
Q 043792          102 LFYSFEP  108 (294)
Q Consensus       102 Vih~a~~  108 (294)
                      |+|....
T Consensus       129 v~~~~~~  135 (209)
T d1nt2a_         129 IYQDIAQ  135 (209)
T ss_dssp             EEECCCS
T ss_pred             EEecccC
Confidence            8886443

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.50  E-value=0.3  Score=35.36  Aligned_cols=69  Identities=17%  Similarity=0.212  Sum_probs=42.4

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHC-CCeEEEE-ecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cCCEE
Q 043792           27 KTVCVMDASGHFASALVRRLLLR-GYTVHAA-LHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GCSGL  102 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~V  102 (294)
                      +||.|+|+ |.+|+..++.|... +.+|+++ ++++++.+.+...   .......++    .   ++++++++  ++|+|
T Consensus         2 iki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~---~~~~~~~~~----~---~~~~~ll~~~~iD~v   70 (184)
T d1ydwa1           2 IRIGVMGC-ADIARKVSRAIHLAPNATISGVASRSLEKAKAFATA---NNYPESTKI----H---GSYESLLEDPEIDAL   70 (184)
T ss_dssp             EEEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHH---TTCCTTCEE----E---SSHHHHHHCTTCCEE
T ss_pred             eEEEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhc---cccccceee----c---CcHHHhhhcccccee
Confidence            68999996 88999999999876 6788765 5555555544441   111111221    1   23445553  68998


Q ss_pred             EecC
Q 043792          103 FYSF  106 (294)
Q Consensus       103 ih~a  106 (294)
                      +-+.
T Consensus        71 ~I~t   74 (184)
T d1ydwa1          71 YVPL   74 (184)
T ss_dssp             EECC
T ss_pred             eecc
Confidence            8653

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.42  E-value=0.41  Score=36.26  Aligned_cols=35  Identities=20%  Similarity=0.099  Sum_probs=29.9

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHH-CCCeEEEEec
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLL-RGYTVHAALH   58 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r   58 (294)
                      +.++++|+|-|- |-+|+++++.|.+ .|.+|++++.
T Consensus        28 ~l~g~~vaIqG~-GnVG~~~a~~L~~e~Ga~vv~vsd   63 (234)
T d1b26a1          28 DPKKATVAVQGF-GNVGQFAALLISQELGSKVVAVSD   63 (234)
T ss_dssp             CTTTCEEEEECC-SHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHhcCCceEEeec
Confidence            456889999985 9999999999975 5999998874

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.16  E-value=0.082  Score=42.40  Aligned_cols=31  Identities=23%  Similarity=0.152  Sum_probs=28.7

Q ss_pred             EEEeCCCchHHHHHHHHHHHCCCeEEEEecCC
Q 043792           29 VCVMDASGHFASALVRRLLLRGYTVHAALHNH   60 (294)
Q Consensus        29 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   60 (294)
                      |+|+|| |..|...+..|.++|++|+++.++.
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            789998 9999999999999999999998754

>d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=92.11  E-value=1.2  Score=32.38  Aligned_cols=42  Identities=14%  Similarity=0.136  Sum_probs=30.2

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCC-----CeEEEEecCCCChhhHHH
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRG-----YTVHAALHNHGKLQCIEE   68 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~l~~   68 (294)
                      .+||.|-|= |-||+.+.|.+++++     .+|.++.......+.+..
T Consensus         2 ~ikigINGF-GRIGR~vlR~~~~~~~~~~~i~iv~Ind~~~~~~~~ay   48 (190)
T d1k3ta1           2 PIKVGINGF-GRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAY   48 (190)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHTTCBTTTEEEEEEEESCCCHHHHHH
T ss_pred             CeEEEEECC-ChHHHHHHHHHHHcCCCCCCeEEEEEecCCCCHHHHHH
Confidence            479999995 999999999999874     355555444445555544

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=91.82  E-value=0.016  Score=44.14  Aligned_cols=107  Identities=10%  Similarity=0.119  Sum_probs=59.4

Q ss_pred             CCCCCeEEEeCCCchHHH-HHHHHHHHC-CCeEEEE-ecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--
Q 043792           23 SNATKTVCVMDASGHFAS-ALVRRLLLR-GYTVHAA-LHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--   97 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~-~l~~~L~~~-g~~V~~~-~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--   97 (294)
                      +.+.-+|.|+|+ |.+|+ +++..+... +.+|.++ ++++++.+...+.+   ... ...+.  ...|   ++++++  
T Consensus        30 ~~~~iriaiIG~-G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~---~i~-~~~~~--~~~d---~~ell~~~   99 (221)
T d1h6da1          30 EDRRFGYAIVGL-GKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEY---GVD-PRKIY--DYSN---FDKIAKDP   99 (221)
T ss_dssp             CCCCEEEEEECC-SHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHT---TCC-GGGEE--CSSS---GGGGGGCT
T ss_pred             CCCCEEEEEEcC-cHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhh---ccc-ccccc--ccCc---hhhhcccc
Confidence            344569999996 89996 566666554 6787765 56665555554421   111 11111  1223   334444  


Q ss_pred             cCCEEEecCCCCCCCCc-----------chhhhHhHhhHHHHHHHHHHHhcCCC
Q 043792           98 GCSGLFYSFEPPSDHST-----------YDELTAEVETMAAHNVLEACAQTNTV  140 (294)
Q Consensus        98 ~~d~Vih~a~~~~~~~~-----------~~~~~~~~n~~~~~~ll~~~~~~~~~  140 (294)
                      ++|+|+-+.....+...           .-++-+..|......+++.+++. ++
T Consensus       100 ~iD~V~I~tp~~~H~~~~~~al~~gk~v~~EKPla~~~~e~~~l~~~a~~~-~~  152 (221)
T d1h6da1         100 KIDAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAA-NK  152 (221)
T ss_dssp             TCCEEEECSCGGGHHHHHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHH-TC
T ss_pred             cceeeeeccchhhhhhHHHHhhhcchhhhcCCCccCCHHHHHHHHHHHHhc-CC
Confidence            57888766433221000           00123446778888889988888 54

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=91.57  E-value=0.049  Score=38.78  Aligned_cols=39  Identities=18%  Similarity=0.093  Sum_probs=30.6

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHH
Q 043792           28 TVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEE   68 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~   68 (294)
                      ||.++|- |..|+.+++.|++.|+.+ +..|+.++...+.+
T Consensus         2 kIg~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~   40 (156)
T d2cvza2           2 KVAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQE   40 (156)
T ss_dssp             CEEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHH
T ss_pred             eEEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHH
Confidence            6889997 999999999999998866 46776655555444

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=91.57  E-value=0.1  Score=39.81  Aligned_cols=35  Identities=14%  Similarity=-0.050  Sum_probs=31.2

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCCh
Q 043792           28 TVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKL   63 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   63 (294)
                      -|+|+|| |..|...+..|.++|++|.++.++....
T Consensus         4 DViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~~g   38 (251)
T d2i0za1           4 DVIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNKLG   38 (251)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCCCC
Confidence            4899998 9999999999999999999999876543

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.19  E-value=1.1  Score=33.04  Aligned_cols=85  Identities=18%  Similarity=0.154  Sum_probs=53.5

Q ss_pred             CCeEEEeCCCchHHHH-HHHH---HHHC-----CCeEEEEecCCCChhhHHHHHhhc------------cCCCCeEEEEC
Q 043792           26 TKTVCVMDASGHFASA-LVRR---LLLR-----GYTVHAALHNHGKLQCIEEELINY------------NEEKKLKVFQA   84 (294)
Q Consensus        26 ~~~vlItGatG~iG~~-l~~~---L~~~-----g~~V~~~~r~~~~~~~l~~~~~~~------------~~~~~v~~~~~   84 (294)
                      ...++|.||||=+... |.-.   |...     +..|+++.|++-..+..++.+...            .-...+.++.+
T Consensus        20 ~~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f~~~~~Y~~~   99 (203)
T d1qkia1          20 THIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVAG   99 (203)
T ss_dssp             CEEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHHHTTEECCBC
T ss_pred             CcEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHhhccccC
Confidence            4679999999998873 2222   2333     477999999765433332211000            01246788899


Q ss_pred             CCCChhHHHHHhc---------cCCEEEecCCCCC
Q 043792           85 DPFDYHSLVNALK---------GCSGLFYSFEPPS  110 (294)
Q Consensus        85 Dl~~~~~~~~~~~---------~~d~Vih~a~~~~  110 (294)
                      |++|++++..+-+         +...|+++|-++.
T Consensus       100 d~~~~~~~~~L~~~l~~~~~~~~~~rifYLAvpP~  134 (203)
T d1qkia1         100 QYDDAASYQRLNSHMNALHLGSQANRLFYLALPPT  134 (203)
T ss_dssp             CTTCHHHHHHHHHHHHHTTTTTTSEEEEEECSCHH
T ss_pred             cCCChhhHHHHHHHHHHHhcCCCcceEEEEecCHH
Confidence            9999987765422         2357888888764

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=90.96  E-value=0.13  Score=38.75  Aligned_cols=35  Identities=17%  Similarity=0.157  Sum_probs=30.5

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHC--CCeEEEEecCCCC
Q 043792           27 KTVCVMDASGHFASALVRRLLLR--GYTVHAALHNHGK   62 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~   62 (294)
                      .||+|+|| |..|...+.+|.+.  |++|+++.+.+..
T Consensus         2 ~kv~iIGa-GpaGl~aA~~L~~~~~~~~V~v~e~~~~~   38 (230)
T d1cjca2           2 PQICVVGS-GPAGFYTAQHLLKHHSRAHVDIYEKQLVP   38 (230)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSSCEEEEECSSSSS
T ss_pred             CeEEEECc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence            58999998 99999999999875  7899999887654

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.82  E-value=0.31  Score=38.28  Aligned_cols=32  Identities=19%  Similarity=0.134  Sum_probs=26.2

Q ss_pred             EEEeCCCchHHHHHHHHHHHCCCeEEEEecCC
Q 043792           29 VCVMDASGHFASALVRRLLLRGYTVHAALHNH   60 (294)
Q Consensus        29 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   60 (294)
                      ++=--.||..|..|+++|+.+|++|+.+.+..
T Consensus        39 ~ItN~SSGk~G~alA~~~~~~Ga~V~li~g~~   70 (290)
T d1p9oa_          39 FLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR   70 (290)
T ss_dssp             EEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             EeCCCCchHHHHHHHHHHHHcCCEEEEEecCC
Confidence            33334579999999999999999999997653

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=90.65  E-value=0.13  Score=41.79  Aligned_cols=30  Identities=20%  Similarity=0.049  Sum_probs=27.8

Q ss_pred             EEEeCCCchHHHHHHHHHHHCCCeEEEEecC
Q 043792           29 VCVMDASGHFASALVRRLLLRGYTVHAALHN   59 (294)
Q Consensus        29 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   59 (294)
                      |+|+|+ |+-|..++.+|.+.|++|.++-+-
T Consensus         5 VIVVGs-G~aG~v~A~rLaeaG~~VlvLEaG   34 (367)
T d1n4wa1           5 AVVIGT-GYGAAVSALRLGEAGVQTLMLEMG   34 (367)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEeCc-CHHHHHHHHHHHHCcCeEEEEecC
Confidence            789997 999999999999999999999873

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=90.65  E-value=1.1  Score=33.18  Aligned_cols=97  Identities=14%  Similarity=0.138  Sum_probs=59.0

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCe-EEEEecCCCChhhHHHHHhhccCCCCeEEEECCC------------------
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYT-VHAALHNHGKLQCIEEELINYNEEKKLKVFQADP------------------   86 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl------------------   86 (294)
                      ..||.|+|- |.-|.+++..|.+.|.+ |-.+.-+.+ .+.|..      .....++..+.-                  
T Consensus        15 ~~ki~ViGv-GGaG~n~v~~l~~~~~~~v~~iainTD-~~~L~~------~~~~~ki~ig~~~t~g~Gag~~p~~g~~aa   86 (209)
T d2vapa1          15 KAKITVVGC-GGAGNNTITRLKMEGIEGAKTVAINTD-AQQLIR------TKADKKILIGKKLTRGLGAGGNPKIGEEAA   86 (209)
T ss_dssp             CCCEEEEEE-HHHHHHHHHHHHHHTCTTEEEEEEESB-HHHHHT------SCCSEEEECCTTTTTTBCCTTCHHHHHHHH
T ss_pred             CCcEEEEEe-CChHHHHHHHHHHcCCCceEEEEEeCC-HHHHhc------CCcchhcccccccccccccccchHHHHHHH
Confidence            478999997 88899999999998743 443333322 122221      112233333221                  


Q ss_pred             -CChhHHHHHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCc
Q 043792           87 -FDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD  141 (294)
Q Consensus        87 -~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~  141 (294)
                       .+.+.+.+.++++|.||-+||.-..          +-...+--+.+.+++. +..
T Consensus        87 ~e~~~~I~~~l~~~d~vfi~AGlGGG----------TGsgaapvia~~ake~-g~l  131 (209)
T d2vapa1          87 KESAEEIKAAIQDSDMVFITCGLGGG----------TGTGSAPVVAEISKKI-GAL  131 (209)
T ss_dssp             HHTHHHHHHHHTTCSEEEEEEETTSS----------HHHHHHHHHHHHHHHT-TCE
T ss_pred             HHHHHHHHHhccCCCEEEEEEeCCCC----------ccccHHHHHHHHHHHc-CCc
Confidence             1234677788899999999987664          1233345567777777 653

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=90.65  E-value=0.11  Score=37.14  Aligned_cols=41  Identities=12%  Similarity=0.133  Sum_probs=28.7

Q ss_pred             CeEEEeCCCchHHHH-HHHHHHHC-CCeEEEEecCCCChhhHHH
Q 043792           27 KTVCVMDASGHFASA-LVRRLLLR-GYTVHAALHNHGKLQCIEE   68 (294)
Q Consensus        27 ~~vlItGatG~iG~~-l~~~L~~~-g~~V~~~~r~~~~~~~l~~   68 (294)
                      +||.|+|+ |.+|+. ....|.+. +.++.+++++++..+.+.+
T Consensus         2 irvgiiG~-G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~   44 (167)
T d1xeaa1           2 LKIAMIGL-GDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLAT   44 (167)
T ss_dssp             EEEEEECC-CHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHH
T ss_pred             eEEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHH
Confidence            68999997 788865 55666555 5677777777666666555

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=90.45  E-value=0.19  Score=38.55  Aligned_cols=39  Identities=15%  Similarity=0.025  Sum_probs=33.7

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhH
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCI   66 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l   66 (294)
                      ..|+|+|| |..|...+..|.++|.+|.++.+.+.....+
T Consensus         5 ~DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~~G~k~   43 (253)
T d2gqfa1           5 SENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKKIGRKI   43 (253)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred             CcEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCCCCCce
Confidence            45999998 9999999999999999999999987654443

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=90.24  E-value=2.1  Score=30.19  Aligned_cols=82  Identities=11%  Similarity=-0.060  Sum_probs=48.5

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCChhhHHHHHhhccCC----CCeE------------EEECCCCCh
Q 043792           27 KTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEEELINYNEE----KKLK------------VFQADPFDY   89 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~----~~v~------------~~~~Dl~~~   89 (294)
                      +||.|-|= |-||+.+.|.++++. .+|.++.. ....+.+...++...-+    ..+.            +....-.++
T Consensus         2 ikigINGF-GRIGR~v~R~~~~~~~i~ivaINd-~~~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~p   79 (166)
T d1gado1           2 IKVGINGF-GRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDP   79 (166)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTCSSEEEEEEEC-SSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred             eEEEEECC-cHHHHHHHHHHhhCCCeEEEEEeC-CCCHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCCh
Confidence            58999885 999999999999984 67776654 34555555433232111    1121            111122344


Q ss_pred             hHHHHHhccCCEEEecCCCCC
Q 043792           90 HSLVNALKGCSGLFYSFEPPS  110 (294)
Q Consensus        90 ~~~~~~~~~~d~Vih~a~~~~  110 (294)
                      +++.=--.++|+||-|-|...
T Consensus        80 ~~i~W~~~gvDiViEcTG~f~  100 (166)
T d1gado1          80 ANLKWDEVGVDVVAEATGLFL  100 (166)
T ss_dssp             GGGCHHHHTCSEEEECSSSCC
T ss_pred             HHCCccccCCCEEEEcccccc
Confidence            433211227899999999765

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=90.11  E-value=0.18  Score=38.89  Aligned_cols=35  Identities=20%  Similarity=0.136  Sum_probs=31.5

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEec
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALH   58 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r   58 (294)
                      +.++++|+|-|- |-+|+++++.|.+.|.+|++++.
T Consensus        33 ~l~g~~v~IQGf-GnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          33 TLVGKTVALAGF-GNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             CSTTCEEEECCS-SHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEec
Confidence            456789999995 99999999999999999998865

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=90.07  E-value=0.22  Score=39.68  Aligned_cols=34  Identities=26%  Similarity=0.416  Sum_probs=24.5

Q ss_pred             CeEEEeCC-C-chH--HHHHHHHHHHCCCeEEEEecCC
Q 043792           27 KTVCVMDA-S-GHF--ASALVRRLLLRGYTVHAALHNH   60 (294)
Q Consensus        27 ~~vlItGa-t-G~i--G~~l~~~L~~~g~~V~~~~r~~   60 (294)
                      |||+|++| | |.+  ...|+++|.++|++|..++...
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~~   38 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTAD   38 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeCC
Confidence            57888775 3 333  3358899999999999887543

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=89.98  E-value=0.24  Score=34.92  Aligned_cols=35  Identities=23%  Similarity=0.179  Sum_probs=28.9

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCe-EEEEecCC
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYT-VHAALHNH   60 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~   60 (294)
                      -+++|+|+|| |..|.-.+..+++.|.+ |+++.|+.
T Consensus        44 ~~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          44 IRGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            3568999998 99999999999999865 77777653

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=89.71  E-value=1.8  Score=31.48  Aligned_cols=94  Identities=13%  Similarity=0.118  Sum_probs=59.1

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCC---eEEEEecCCCChhhHHHHHhhccCCCCeEEEECC-C----------------
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGY---TVHAALHNHGKLQCIEEELINYNEEKKLKVFQAD-P----------------   86 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~D-l----------------   86 (294)
                      +||.|+|- |..|.+++..|.+.+.   +.++++.+.   +.|..      .....++..+. +                
T Consensus         1 ~kI~viGv-GGaG~n~v~~l~~~~~~~v~~iainTD~---~~L~~------~~a~~ki~iG~~~t~G~G~g~~p~~g~~a   70 (194)
T d1w5fa1           1 LKIKVIGV-GGAGNNAINRMIEIGIHGVEFVAVNTDL---QVLEA------SNADVKIQIGENITRGLGAGGRPEIGEQA   70 (194)
T ss_dssp             CCEEEEEE-HHHHHHHHHHHHHHCCTTEEEEEEESCH---HHHHT------CCCSEEEECCTTTTTTSCCTTCHHHHHHH
T ss_pred             CeEEEEEe-CchHHHHHHHHHHcCCCceEEEEEcCCH---HHHhc------CCcceEEecccccCCCcccccCchhhHhH
Confidence            57899997 8889999999999763   344444332   22221      12233333331 1                


Q ss_pred             --CChhHHHHHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCc
Q 043792           87 --FDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVD  141 (294)
Q Consensus        87 --~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~  141 (294)
                        .+.+.+.+.++++|.||-+|+.-..          +-.-++--+.+.+++. ++.
T Consensus        71 a~e~~~~I~~~l~~~d~vfi~AGlGGg----------TGtgaapviA~~ake~-g~l  116 (194)
T d1w5fa1          71 ALESEEKIREVLQDTHMVFITAGFGGG----------TGTGASPVIAKIAKEM-GIL  116 (194)
T ss_dssp             HHHTHHHHHHHTTTCSEEEEEEETTSS----------HHHHHHHHHHHHHHHT-TCE
T ss_pred             HHHHHHHHHHHhcCCCeEEEEEecCCC----------cccchHHHHHHHHHHc-CCc
Confidence              1235677778899999999887664          2234455677888777 653

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=89.63  E-value=0.19  Score=40.29  Aligned_cols=33  Identities=18%  Similarity=0.083  Sum_probs=28.9

Q ss_pred             eEEEeCCCchHHHHHHHHHHH-----CCCeEEEEecCCC
Q 043792           28 TVCVMDASGHFASALVRRLLL-----RGYTVHAALHNHG   61 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~   61 (294)
                      =|+|.|| |..|..++..|++     .|++|+++.|++.
T Consensus         9 DV~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~~   46 (360)
T d1pn0a1           9 DVLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRST   46 (360)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCCC
Confidence            4899998 9999999999974     6999999998754

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=89.30  E-value=0.19  Score=39.57  Aligned_cols=32  Identities=16%  Similarity=0.025  Sum_probs=29.4

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC
Q 043792           28 TVCVMDASGHFASALVRRLLLRGYTVHAALHNH   60 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   60 (294)
                      =|+|+|| |..|...+..|.++|.+|+++.+.+
T Consensus        18 DVlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          18 DVVVVGS-GGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            4899998 9999999999999999999998764

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=89.27  E-value=0.38  Score=34.76  Aligned_cols=100  Identities=10%  Similarity=0.045  Sum_probs=56.0

Q ss_pred             CCeEEEeCCCchHHHHH-HHHHHHCC--CeEEEE-ecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhc--cC
Q 043792           26 TKTVCVMDASGHFASAL-VRRLLLRG--YTVHAA-LHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALK--GC   99 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l-~~~L~~~g--~~V~~~-~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~   99 (294)
                      +.||.|.|. |.+|+.+ +..+.+.+  .++.++ +++++..+.+.+.+       +...+.   .   +++++++  ++
T Consensus         3 kirigiIG~-G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~-------~~~~~~---~---~~~ell~~~~i   68 (181)
T d1zh8a1           3 KIRLGIVGC-GIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMV-------GNPAVF---D---SYEELLESGLV   68 (181)
T ss_dssp             CEEEEEECC-SHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHH-------SSCEEE---S---CHHHHHHSSCC
T ss_pred             CcEEEEEcC-CHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccc-------ccccee---e---eeecccccccc
Confidence            468999996 9999864 66676643  467755 55555555544421       111222   2   2445554  58


Q ss_pred             CEEEecCCCCCCCCc-----------chhhhHhHhhHHHHHHHHHHHhcCCC
Q 043792          100 SGLFYSFEPPSDHST-----------YDELTAEVETMAAHNVLEACAQTNTV  140 (294)
Q Consensus       100 d~Vih~a~~~~~~~~-----------~~~~~~~~n~~~~~~ll~~~~~~~~~  140 (294)
                      |+|+-+.....+...           .-++-...|..-...+++.+++. ++
T Consensus        69 d~v~I~tp~~~h~~~~~~al~~gk~V~~EKPl~~~~~e~~~l~~~~~~~-~~  119 (181)
T d1zh8a1          69 DAVDLTLPVELNLPFIEKALRKGVHVICEKPISTDVETGKKVVELSEKS-EK  119 (181)
T ss_dssp             SEEEECCCGGGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHC-SS
T ss_pred             ceeeccccccccccccccccccchhhhcCCCCcCCHHHHHHHHHHHHHh-CC
Confidence            988866332211000           00133445677778888888777 54

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=89.18  E-value=0.22  Score=36.97  Aligned_cols=31  Identities=13%  Similarity=0.085  Sum_probs=28.4

Q ss_pred             EEEeCCCchHHHHHHHHHHHCCCeEEEEecCC
Q 043792           29 VCVMDASGHFASALVRRLLLRGYTVHAALHNH   60 (294)
Q Consensus        29 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   60 (294)
                      |+|+|| |+.|...+.++.+.|.+|.++.++.
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~~   35 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAKE   35 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence            789998 9999999999999999999998753

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=88.95  E-value=1.7  Score=31.84  Aligned_cols=78  Identities=17%  Similarity=0.131  Sum_probs=48.4

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChh---------hHHHHHhhccCCCCeEEEECCCCChhHHHHHh
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQ---------CIEEELINYNEEKKLKVFQADPFDYHSLVNAL   96 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~   96 (294)
                      .|||+++|. +..+..+.+.|.+.|++|.++...+++..         .+..   . ....++.+......+.+.+.+.+
T Consensus         3 ~mKI~f~G~-~~~~~~~L~~L~~~~~~i~~Vit~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~   77 (206)
T d1fmta2           3 SLRIIFAGT-PDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKV---L-AEEKGLPVFQPVSLRPQENQQLV   77 (206)
T ss_dssp             CCEEEEEEC-SHHHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHH---H-HHHTTCCEECCSCSCSHHHHHHH
T ss_pred             CcEEEEECC-CHHHHHHHHHHHhCCCCEEEEEeCCCcccccCccccccchhh---h-hhccCccccccccccchhhHHHH
Confidence            478999985 77899999999999999887754332211         0111   0 01124555555555555566666


Q ss_pred             c--cCCEEEecCCC
Q 043792           97 K--GCSGLFYSFEP  108 (294)
Q Consensus        97 ~--~~d~Vih~a~~  108 (294)
                      +  ++|.++-+...
T Consensus        78 ~~~~~d~~v~~~~~   91 (206)
T d1fmta2          78 AELQADVMVVVAYG   91 (206)
T ss_dssp             HHTTCSEEEEESCC
T ss_pred             hhhcceEEEeeccc
Confidence            5  56877766554

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=88.43  E-value=0.25  Score=38.38  Aligned_cols=33  Identities=15%  Similarity=0.092  Sum_probs=29.6

Q ss_pred             eEEEeCCCchHHHHHHHHHHHC-CCeEEEEecCCC
Q 043792           28 TVCVMDASGHFASALVRRLLLR-GYTVHAALHNHG   61 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~   61 (294)
                      -|+|+|| |.-|...+..|+++ |++|.++.+++.
T Consensus        35 DViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~~   68 (278)
T d1rp0a1          35 DVVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSVS   68 (278)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTSTTSCEEEEESSSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHccCCeEEEEecCCC
Confidence            4999998 99999999999875 999999998754

>d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=88.12  E-value=3.1  Score=29.29  Aligned_cols=82  Identities=12%  Similarity=-0.083  Sum_probs=46.6

Q ss_pred             eEEEeCCCchHHHHHHHHHHHC-CCeEEEEecCCCChhhHHHHHhhccCCC----CeE------------EEECCCCChh
Q 043792           28 TVCVMDASGHFASALVRRLLLR-GYTVHAALHNHGKLQCIEEELINYNEEK----KLK------------VFQADPFDYH   90 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l~~~~~~~~~~~----~v~------------~~~~Dl~~~~   90 (294)
                      ||.|=|= |-||+.+.+.++++ ..+|.++.......+.+...++....+.    .++            +....-.|++
T Consensus         2 kigINGf-GRIGR~v~R~~~~~~~~~iv~INd~~~d~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~~~p~   80 (166)
T d2b4ro1           2 KLGINGF-GRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPS   80 (166)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEECCSSGG
T ss_pred             eEEEECC-CHHHHHHHHHHhhCCCcEEEEECCCCCChHHhhhhhhcccccccceeeeccCCceEEecCcEEEEEeCCChH
Confidence            6888775 99999999999986 4666666543334555544332321111    111            1111223444


Q ss_pred             HHHHHhccCCEEEecCCCCC
Q 043792           91 SLVNALKGCSGLFYSFEPPS  110 (294)
Q Consensus        91 ~~~~~~~~~d~Vih~a~~~~  110 (294)
                      ++.=.-.++|+|+-|-|...
T Consensus        81 ~i~W~~~gvdiViEcTG~f~  100 (166)
T d2b4ro1          81 QIPWGKCQVDVVCESTGVFL  100 (166)
T ss_dssp             GCCHHHHTCSEEEECSSSCC
T ss_pred             HccccccCCCEEEEeccccc
Confidence            33211227999999998765

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=88.01  E-value=0.25  Score=39.81  Aligned_cols=30  Identities=23%  Similarity=0.345  Sum_probs=27.6

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCCCeEEEEec
Q 043792           28 TVCVMDASGHFASALVRRLLLRGYTVHAALH   58 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r   58 (294)
                      =|+|+|+ |.-|..++.+|.+.|++|+++-+
T Consensus         6 DviIVGs-G~aG~v~A~~La~~G~kVlvLEa   35 (379)
T d2f5va1           6 DVVIVGS-GPIGCTYARELVGAGYKVAMFDI   35 (379)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECS
T ss_pred             cEEEECc-CHHHHHHHHHHhhCCCeEEEEec
Confidence            3889997 99999999999999999999976

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=87.65  E-value=3.1  Score=29.39  Aligned_cols=41  Identities=17%  Similarity=0.102  Sum_probs=30.0

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCC-CeEEEEecCCCChhhHHH
Q 043792           27 KTVCVMDASGHFASALVRRLLLRG-YTVHAALHNHGKLQCIEE   68 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~   68 (294)
                      .||.|-|= |-||+.+.|.+++++ .+|.++.......+.+..
T Consensus         2 ikIgINGF-GRIGR~v~R~~~~~~~~~ivaINd~~~~~~~~ay   43 (169)
T d1u8fo1           2 VKVGVNGF-GRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVY   43 (169)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHH
T ss_pred             cEEEEECC-cHHHHHHHHHHHHCCCcEEEEecCCCccHHHHHH
Confidence            48999884 999999999998874 777776543344555444

>d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain
species: Thermotoga maritima [TaxId: 2336]

Probab=87.65  E-value=0.47  Score=29.96  Aligned_cols=32  Identities=25%  Similarity=0.296  Sum_probs=26.5

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHN   59 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   59 (294)
                      |||||+|+ |.=-.+|+..|.+.+.+++++.-+
T Consensus         1 MkVLviGs-GgREHAia~~l~~s~~~v~~~pGN   32 (90)
T d1vkza2           1 VRVHILGS-GGREHAIGWAFAKQGYEVHFYPGN   32 (90)
T ss_dssp             CEEEEEEC-SHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHhcCCCeEEEecCC
Confidence            79999998 555889999999999998886433

>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Brevibacterium sterolicum [TaxId: 1702]

Probab=87.58  E-value=0.26  Score=39.91  Aligned_cols=31  Identities=16%  Similarity=0.125  Sum_probs=28.0

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCCCeEEEEecC
Q 043792           28 TVCVMDASGHFASALVRRLLLRGYTVHAALHN   59 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   59 (294)
                      =|+|+|+ |+-|..++.+|.+.|++|+++-+-
T Consensus         9 dvIVVGs-G~aG~v~A~rLaeaG~~VlvLEaG   39 (370)
T d3coxa1           9 PALVIGS-GYGGAVAALRLTQAGIPTQIVEMG   39 (370)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCeEEEEeCC
Confidence            4789997 999999999999999999999763

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=87.45  E-value=0.5  Score=34.04  Aligned_cols=77  Identities=14%  Similarity=0.120  Sum_probs=47.5

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhc-----------cCCCCeEEEECCCCChhHH
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINY-----------NEEKKLKVFQADPFDYHSL   92 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~-----------~~~~~v~~~~~Dl~~~~~~   92 (294)
                      .++.+||..|++ . |+ .+..|+++|++|++++.++.-.+..++..+..           ......+++.+|..+....
T Consensus        19 ~~~~rvLd~GCG-~-G~-~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~   95 (201)
T d1pjza_          19 VPGARVLVPLCG-K-SQ-DMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR   95 (201)
T ss_dssp             CTTCEEEETTTC-C-SH-HHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred             CCCCEEEEecCc-C-CH-HHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccccc
Confidence            457899999973 3 44 55588889999999999876665555421110           0123456778887664422


Q ss_pred             HHHhccCCEEEec
Q 043792           93 VNALKGCSGLFYS  105 (294)
Q Consensus        93 ~~~~~~~d~Vih~  105 (294)
                      .  ....|.|+..
T Consensus        96 ~--~~~~D~i~~~  106 (201)
T d1pjza_          96 D--IGHCAAFYDR  106 (201)
T ss_dssp             H--HHSEEEEEEE
T ss_pred             c--ccceeEEEEE
Confidence            1  1234666554

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=87.43  E-value=0.22  Score=37.43  Aligned_cols=37  Identities=14%  Similarity=0.003  Sum_probs=31.6

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCC-------CeEEEEecCCCChh
Q 043792           27 KTVCVMDASGHFASALVRRLLLRG-------YTVHAALHNHGKLQ   64 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~   64 (294)
                      .||+|+|| |.-|...+.+|+++|       ++|+++.+.+..-.
T Consensus         3 ~~VaVIGa-GpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~~~GG   46 (239)
T d1lqta2           3 YYIAIVGS-GPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWG   46 (239)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCST
T ss_pred             cEEEEECc-CHHHHHHHHHHHHcCCccccCCCceEEEecCCCCCC
Confidence            58999998 999999999999988       47999988765433

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=87.32  E-value=0.31  Score=36.09  Aligned_cols=31  Identities=10%  Similarity=0.104  Sum_probs=28.6

Q ss_pred             EEEeCCCchHHHHHHHHHHHCCCeEEEEecCC
Q 043792           29 VCVMDASGHFASALVRRLLLRGYTVHAALHNH   60 (294)
Q Consensus        29 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   60 (294)
                      |+|+|| |..|...+.++.+.|.+|.++.+..
T Consensus         6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~~   36 (221)
T d1dxla1           6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKRG   36 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence            789998 9999999999999999999998764

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=87.16  E-value=0.76  Score=34.59  Aligned_cols=81  Identities=11%  Similarity=0.099  Sum_probs=59.2

Q ss_pred             CCCCCeEEEeCC-CchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCE
Q 043792           23 SNATKTVCVMDA-SGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        23 ~~~~~~vlItGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~  101 (294)
                      ..++++||=.|+ +|+.-++|++. ...| .|++++.++...+.+..   ......++.++.+|..++..+......+|.
T Consensus        72 ikpG~~VLDlGcGsG~~~~~la~~-~~~g-~V~aVDiS~~~i~~a~~---~a~~~~ni~~i~~d~~~~~~~~~~~~~v~~  146 (230)
T d1g8sa_          72 IKRDSKILYLGASAGTTPSHVADI-ADKG-IVYAIEYAPRIMRELLD---ACAERENIIPILGDANKPQEYANIVEKVDV  146 (230)
T ss_dssp             CCTTCEEEEESCCSSHHHHHHHHH-TTTS-EEEEEESCHHHHHHHHH---HTTTCTTEEEEECCTTCGGGGTTTCCCEEE
T ss_pred             CCCCCEEEEeCEEcCHHHHHHHHh-CCCC-EEEEEeCcHHHHHHHHH---HHhhhcccceEEEeeccCcccccccceeEE
Confidence            345789999995 57777788775 3444 89999999877766666   445567889999999988877655556677


Q ss_pred             EEecCCC
Q 043792          102 LFYSFEP  108 (294)
Q Consensus       102 Vih~a~~  108 (294)
                      +++....
T Consensus       147 i~~~~~~  153 (230)
T d1g8sa_         147 IYEDVAQ  153 (230)
T ss_dssp             EEECCCS
T ss_pred             eeccccc
Confidence            7765443

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.13  E-value=0.48  Score=35.01  Aligned_cols=31  Identities=16%  Similarity=0.233  Sum_probs=27.1

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEec
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALH   58 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r   58 (294)
                      |||++.|. +..|..+.+.|++.|++|.++..
T Consensus         1 MkI~~~G~-~~~~~~~l~~L~~~~~~i~~V~t   31 (203)
T d2bw0a2           1 MKIAVIGQ-SLFGQEVYCHLRKEGHEVVGVFT   31 (203)
T ss_dssp             CEEEEECC-HHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCcEEEEEc
Confidence            68999986 67799999999999999998764

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=87.02  E-value=0.18  Score=36.77  Aligned_cols=35  Identities=3%  Similarity=-0.099  Sum_probs=30.9

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNH   60 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   60 (294)
                      +.++|+|+|| |..|-.-+.+|.+.|.+|+++.+..
T Consensus         4 k~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~~   38 (190)
T d1trba1           4 KHSKLLILGS-GPAGYTAAVYAARANLQPVLITGME   38 (190)
T ss_dssp             EEEEEEEECC-SHHHHHHHHHHHTTTCCCEEECCSS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHcCCceEEEEeec
Confidence            4578999998 9999999999999999999997654

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=86.94  E-value=3.1  Score=29.55  Aligned_cols=40  Identities=15%  Similarity=0.160  Sum_probs=28.3

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCC----CeEEEEecCCCChhhHHH
Q 043792           27 KTVCVMDASGHFASALVRRLLLRG----YTVHAALHNHGKLQCIEE   68 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~l~~   68 (294)
                      +||.|=|= |-||+.+.|.+++++    .+|.++.. ....+.+..
T Consensus         2 ikigINGf-GRIGR~v~R~~~~~~~~~~~~vvaINd-~~~~~~~ay   45 (173)
T d1obfo1           2 IRVAINGY-GRIGRNILRAHYEGGKSHDIEIVAIND-LGDPKTNAH   45 (173)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTTSCSSEEEEEEEC-SSCHHHHHH
T ss_pred             eEEEEECC-cHHHHHHHHHHHhCCCCCCeEEEEEcC-CCChHHHHH
Confidence            68999885 999999999999753    45655543 344555544

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=86.85  E-value=1.4  Score=35.20  Aligned_cols=73  Identities=15%  Similarity=0.097  Sum_probs=53.8

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHH-CC-CeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEE
Q 043792           26 TKTVCVMDASGHFASALVRRLLL-RG-YTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLF  103 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~-~g-~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vi  103 (294)
                      -+++.|+|+ |..+..-++.+.+ .+ .+|++.+|+++..+.+..++   ....++++..++     +++++++++|+|+
T Consensus       128 a~~l~iiG~-G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l---~~~~g~~v~~~~-----s~~eav~~ADIi~  198 (340)
T d1x7da_         128 ARKMALIGN-GAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANL---KEYSGLTIRRAS-----SVAEAVKGVDIIT  198 (340)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHH---TTCTTCEEEECS-----SHHHHHTTCSEEE
T ss_pred             CceEEEEcc-cHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhh---hhccCCCceecC-----CHHHHHhcCCcee
Confidence            478999997 8889888887766 44 67999999988777776643   223356666654     4778899999998


Q ss_pred             ecCC
Q 043792          104 YSFE  107 (294)
Q Consensus       104 h~a~  107 (294)
                      -+-+
T Consensus       199 t~Ta  202 (340)
T d1x7da_         199 TVTA  202 (340)
T ss_dssp             ECCC
T ss_pred             eccc
Confidence            7644

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=86.80  E-value=2.7  Score=33.14  Aligned_cols=81  Identities=19%  Similarity=0.067  Sum_probs=51.2

Q ss_pred             CCCeEEEeC-CCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChh-HHHHHhccCCEE
Q 043792           25 ATKTVCVMD-ASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYH-SLVNALKGCSGL  102 (294)
Q Consensus        25 ~~~~vlItG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~-~~~~~~~~~d~V  102 (294)
                      ++++||=.+ ++|..+.++    +..+.+|++++.++...+..++++...+ -.+++++.+|..+.. .+...-+..|.|
T Consensus       145 ~g~rVLDl~~gtG~~s~~~----a~g~~~V~~vD~s~~al~~a~~n~~~ng-l~~~~~i~~d~~~~~~~~~~~~~~fD~V  219 (318)
T d1wxxa2         145 RGERALDVFSYAGGFALHL----ALGFREVVAVDSSAEALRRAEENARLNG-LGNVRVLEANAFDLLRRLEKEGERFDLV  219 (318)
T ss_dssp             CEEEEEEETCTTTHHHHHH----HHHEEEEEEEESCHHHHHHHHHHHHHTT-CTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred             CCCeeeccCCCCcHHHHHH----HhcCCcEEeecchHHHHHHHHHHHHHcC-CCCcceeeccHHHHhhhhHhhhcCCCEE
Confidence            466777554 455555443    3456799999999887777766543332 246899999986532 222222358999


Q ss_pred             EecCCCCC
Q 043792          103 FYSFEPPS  110 (294)
Q Consensus       103 ih~a~~~~  110 (294)
                      |.......
T Consensus       220 i~DpP~~~  227 (318)
T d1wxxa2         220 VLDPPAFA  227 (318)
T ss_dssp             EECCCCSC
T ss_pred             EEcCCccc
Confidence            98865433

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=86.79  E-value=3.8  Score=28.89  Aligned_cols=81  Identities=15%  Similarity=-0.009  Sum_probs=46.5

Q ss_pred             eEEEeCCCchHHHHHHHHHHHC---CCeEEEEecCCCChhhHHHHHhhccCC----CCeE------------EEECCCCC
Q 043792           28 TVCVMDASGHFASALVRRLLLR---GYTVHAALHNHGKLQCIEEELINYNEE----KKLK------------VFQADPFD   88 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~---g~~V~~~~r~~~~~~~l~~~~~~~~~~----~~v~------------~~~~Dl~~   88 (294)
                      ||.|-|= |-||+.+.|.++++   +.+|.++.. ....+.+...++...-+    ..++            +....-.+
T Consensus         2 kIgINGf-GRIGR~v~R~~~~~~~~~i~vvaINd-~~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~   79 (169)
T d1hdgo1           2 RVAINGF-GRIGRLVYRIIYERKNPDIEVVAIND-LTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPD   79 (169)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCTTCEEEEEEC-SSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred             EEEEECC-ChHHHHHHHHHHhccCCCEEEEEecc-CccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCCC
Confidence            6888885 99999999999874   367777654 34555555433232111    1111            11112233


Q ss_pred             hhHHHHHhccCCEEEecCCCCC
Q 043792           89 YHSLVNALKGCSGLFYSFEPPS  110 (294)
Q Consensus        89 ~~~~~~~~~~~d~Vih~a~~~~  110 (294)
                      ++++.=.-.++|+||-|-|...
T Consensus        80 p~~i~W~~~gvD~ViEcTG~f~  101 (169)
T d1hdgo1          80 PSKLPWKDLGVDFVIESTGVFR  101 (169)
T ss_dssp             GGGSCHHHHTCCEEEECSSSCC
T ss_pred             hhhCCccccCCCEEEEecceec
Confidence            4333211126899999999765

>d3bswa1 b.81.1.8 (A:3-195) Acetyltransferase PglD {Campylobacter jejuni [TaxId: 197]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: PglD-like
domain: Acetyltransferase PglD
species: Campylobacter jejuni [TaxId: 197]

Probab=86.64  E-value=0.46  Score=34.75  Aligned_cols=33  Identities=24%  Similarity=0.266  Sum_probs=25.9

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHN   59 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   59 (294)
                      .+|++|.||+|+ |+.+...+.+.++++.++..+
T Consensus         2 ~kkl~i~Gagg~-~~~v~di~~~~~~~~~~f~dd   34 (193)
T d3bswa1           2 TEKIYIYGASGH-GLVCEDVAKNMGYKECIFLDD   34 (193)
T ss_dssp             CSEEEEEC--CH-HHHHHHHHHHHTCCEEEECCC
T ss_pred             CCEEEEEcCCHh-HHHHHHHHHhCCCcEEEEEcC
Confidence            589999999665 999999998899998887544

>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.57  E-value=0.32  Score=36.17  Aligned_cols=34  Identities=18%  Similarity=0.121  Sum_probs=27.6

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCC--eEEEEecCC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGY--TVHAALHNH   60 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~   60 (294)
                      ...++|.|| |++|-.++..|.+.|+  +|+++++.+
T Consensus         4 ~~~~vIvG~-G~aG~~~A~~Lr~~~~~~~I~li~~e~   39 (213)
T d1m6ia1           4 HVPFLLIGG-GTAAFAAARSIRARDPGARVLIVSEDP   39 (213)
T ss_dssp             EEEEEEESC-SHHHHHHHHHHHHHSTTCEEEEEESSS
T ss_pred             CCCEEEECC-cHHHHHHHHHHHhcCCCCcEEEEeCCC
Confidence            356889998 9999999999998875  487777643

>d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: (Uracil-5-)-methyltransferase
domain: rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain
species: Escherichia coli [TaxId: 562]

Probab=86.29  E-value=0.84  Score=36.73  Aligned_cols=99  Identities=11%  Similarity=0.089  Sum_probs=62.1

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChh-HHHHHhccCCEEEecC
Q 043792           28 TVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYH-SLVNALKGCSGLFYSF  106 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~-~~~~~~~~~d~Vih~a  106 (294)
                      .+=+-+|+|.+|..|+    +++.+|+++..+++..+..+.+... ..-.+++++.+|..+.- .........|+||---
T Consensus       216 vlDLycG~G~fsl~La----~~~~~V~gvE~~~~ai~~A~~na~~-n~i~n~~~~~~~~~~~~~~~~~~~~~~d~vilDP  290 (358)
T d1uwva2         216 VLDLFCGMGNFTLPLA----TQAASVVGVEGVPALVEKGQQNARL-NGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDP  290 (358)
T ss_dssp             EEEESCTTTTTHHHHH----TTSSEEEEEESCHHHHHHHHHHHHH-TTCCSEEEEECCTTSCCSSSGGGTTCCSEEEECC
T ss_pred             EEEecccccccchhcc----ccccEEEeccCcHHHHHHHHHhHHh-cccccceeeecchhhhhhhhhhhhccCceEEeCC
Confidence            3447789999998765    4678999999887766655554322 33457899999886532 1111223468886653


Q ss_pred             CCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcEEEEecC
Q 043792          107 EPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSS  148 (294)
Q Consensus       107 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~v~~Ss  148 (294)
                      .-.+                ....++.+.+. +.+++||+|-
T Consensus       291 PR~G----------------~~~~~~~l~~~-~~~~ivYVSC  315 (358)
T d1uwva2         291 ARAG----------------AAGVMQQIIKL-EPIRIVYVSC  315 (358)
T ss_dssp             CTTC----------------CHHHHHHHHHH-CCSEEEEEES
T ss_pred             CCcc----------------HHHHHHHHHHc-CCCEEEEEeC
Confidence            3222                11244445555 7789999985

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=86.27  E-value=0.68  Score=35.13  Aligned_cols=36  Identities=19%  Similarity=0.185  Sum_probs=30.7

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHC-CCeEEEEecC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLR-GYTVHAALHN   59 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~   59 (294)
                      +.++++|+|-|- |-+|+++++.|.++ |.+|++++..
T Consensus        29 ~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vsD~   65 (239)
T d1gtma1          29 TLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVSDS   65 (239)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecccc
Confidence            457899999997 99999999999864 9999988754

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.24  E-value=0.65  Score=34.79  Aligned_cols=82  Identities=12%  Similarity=0.028  Sum_probs=51.3

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhh----------------ccCCCCeEEEECCCC
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELIN----------------YNEEKKLKVFQADPF   87 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~----------------~~~~~~v~~~~~Dl~   87 (294)
                      ..+.+||..|+ |- | ..+..|+++|++|++++-++...+..+++...                .....+++++.+|+.
T Consensus        44 ~~~~rvLd~GC-G~-G-~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~  120 (229)
T d2bzga1          44 KSGLRVFFPLC-GK-A-VEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIF  120 (229)
T ss_dssp             CCSCEEEETTC-TT-C-THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGG
T ss_pred             CCCCEEEEeCC-CC-c-HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchh
Confidence            35679999997 43 4 45777889999999999987665544332100                112346888889875


Q ss_pred             ChhHHHHHhccCCEEEecCCCCC
Q 043792           88 DYHSLVNALKGCSGLFYSFEPPS  110 (294)
Q Consensus        88 ~~~~~~~~~~~~d~Vih~a~~~~  110 (294)
                      +....  .-...|+|+.......
T Consensus       121 ~l~~~--~~~~fd~i~~~~~l~~  141 (229)
T d2bzga1         121 DLPRT--NIGKFDMIWDRGALVA  141 (229)
T ss_dssp             GGGGS--CCCCEEEEEESSSTTT
T ss_pred             hcccc--ccCceeEEEEEEEEEe
Confidence            53311  0113577777665544

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=86.00  E-value=0.36  Score=35.16  Aligned_cols=34  Identities=9%  Similarity=-0.016  Sum_probs=30.2

Q ss_pred             CCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC
Q 043792           26 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNH   60 (294)
Q Consensus        26 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   60 (294)
                      .++|+|+|| |..|...+..|.+.|.+|.++.+..
T Consensus         5 ~~~VvIIGg-GpaGl~aA~~~ar~g~~v~vie~~~   38 (192)
T d1vdca1           5 NTRLCIVGS-GPAAHTAAIYAARAELKPLLFEGWM   38 (192)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred             cceEEEECC-CHHHHHHHHHHHHcCCcEEEEEeec
Confidence            478999998 9999999999999999999987643

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=85.66  E-value=0.37  Score=38.19  Aligned_cols=32  Identities=16%  Similarity=0.039  Sum_probs=29.3

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC
Q 043792           28 TVCVMDASGHFASALVRRLLLRGYTVHAALHNH   60 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   60 (294)
                      =|+|+|+ |..|...+..|.++|.+|+++.+.+
T Consensus        25 DVvVIG~-G~aGl~aA~~la~~G~~V~llEk~~   56 (322)
T d1d4ca2          25 DVVIIGS-GGAGLAAAVSARDAGAKVILLEKEP   56 (322)
T ss_dssp             SEEEECS-SHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             eEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            4999998 9999999999999999999998764

>d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Biliverdin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=85.66  E-value=0.13  Score=37.08  Aligned_cols=26  Identities=23%  Similarity=0.198  Sum_probs=20.8

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLR   49 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~   49 (294)
                      +..+++|.|.|. |.+|+..++.|.+.
T Consensus         4 ~~~k~kv~iIG~-G~~g~~h~~~l~~~   29 (172)
T d1lc0a1           4 NSGKFGVVVVGV-GRAGSVRLRDLKDP   29 (172)
T ss_dssp             CCCSEEEEEECC-SHHHHHHHHHHTSH
T ss_pred             CCCCcEEEEEcC-CHHHHHHHHHHHhC
Confidence            445679999997 99999988887653

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=85.50  E-value=0.4  Score=39.32  Aligned_cols=32  Identities=22%  Similarity=0.177  Sum_probs=24.6

Q ss_pred             CeEEEeCC------CchHH---HHHHHHHHHCCCeEEEEec
Q 043792           27 KTVCVMDA------SGHFA---SALVRRLLLRGYTVHAALH   58 (294)
Q Consensus        27 ~~vlItGa------tG~iG---~~l~~~L~~~g~~V~~~~r   58 (294)
                      ||||+++.      +|.+|   ..|++.|.++||+|++++.
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp   41 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTP   41 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEec
Confidence            67777664      35555   5679999999999999874

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=85.49  E-value=1.3  Score=34.17  Aligned_cols=76  Identities=11%  Similarity=0.089  Sum_probs=50.5

Q ss_pred             CeEE-EeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEec
Q 043792           27 KTVC-VMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYS  105 (294)
Q Consensus        27 ~~vl-ItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih~  105 (294)
                      .+++ +.||+|-|+..+++   ..+.+|++++.++........+.........+.+..+|+.+..  ......+|.||-|
T Consensus       112 ~~vld~g~GsG~i~~~la~---~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~~--~~~~~~fDlIVsN  186 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVAK---FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPF--KEKFASIEMILSN  186 (271)
T ss_dssp             CEEEEESCTTSHHHHHHHH---HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGG--GGGTTTCCEEEEC
T ss_pred             cEEEEeeeeeehhhhhhhh---cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeeccccccc--ccccCcccEEEEc
Confidence            3455 66666777766543   3567899999998777666655434444557788889986642  2223467999999


Q ss_pred             CC
Q 043792          106 FE  107 (294)
Q Consensus       106 a~  107 (294)
                      ..
T Consensus       187 PP  188 (271)
T d1nv8a_         187 PP  188 (271)
T ss_dssp             CC
T ss_pred             cc
Confidence            44

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=85.48  E-value=0.3  Score=35.83  Aligned_cols=75  Identities=13%  Similarity=0.191  Sum_probs=50.6

Q ss_pred             EeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHh--ccCCEEEecCCC
Q 043792           31 VMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNAL--KGCSGLFYSFEP  108 (294)
Q Consensus        31 ItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~--~~~d~Vih~a~~  108 (294)
                      +|-|+|....++.+.+ . +.+|+++++++...+.....  ......++.++.+++.+...+..-+  ..+|.|+.-.|.
T Consensus        30 ~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~--l~~~~~r~~~~~~~f~~~~~~~~~~~~~~vdgIl~DlGv  105 (192)
T d1m6ya2          30 CTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEK--LKEFSDRVSLFKVSYREADFLLKTLGIEKVDGILMDLGV  105 (192)
T ss_dssp             TTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHH--TGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEEEEECSC
T ss_pred             ecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHh--hccccccccchhHHHhhHHHHHHHcCCCCcceeeeccch
Confidence            4556666666666665 3 46899999998766554442  2233568999999998766654443  467988777666


Q ss_pred             C
Q 043792          109 P  109 (294)
Q Consensus       109 ~  109 (294)
                      .
T Consensus       106 S  106 (192)
T d1m6ya2         106 S  106 (192)
T ss_dssp             C
T ss_pred             h
Confidence            4

>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=85.47  E-value=0.32  Score=39.89  Aligned_cols=33  Identities=18%  Similarity=0.163  Sum_probs=29.6

Q ss_pred             eEEEeCCCchHHHHHHHHHHH------CCCeEEEEecCCC
Q 043792           28 TVCVMDASGHFASALVRRLLL------RGYTVHAALHNHG   61 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~------~g~~V~~~~r~~~   61 (294)
                      =|+|.|| |-.|+..+..|++      +|++|.++.|...
T Consensus        34 DViIVGg-GPAGlsaA~~LA~l~~~~~~Gl~VlllEK~~~   72 (380)
T d2gmha1          34 DVVIVGA-GPAGLSAATRLKQLAAQHEKDLRVCLVEKAAH   72 (380)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHHHHTTCCCCEEEECSSSS
T ss_pred             CEEEECC-CHHHHHHHHHHHhhhhhhcCCCEEEEEcCCCC
Confidence            4999998 9999999999987      7999999998754

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=85.34  E-value=0.36  Score=36.62  Aligned_cols=74  Identities=9%  Similarity=-0.033  Sum_probs=49.2

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      ..++||=.|++..   .++..|+++|.+|++++.++.-.+..++.  ....+.+++++.+|+.+.+    .-+.+|.|+.
T Consensus        37 ~~~~vLDiGCG~G---~~~~~l~~~g~~v~GvD~S~~ml~~A~~~--~~~~~~~v~~~~~d~~~~~----~~~~fD~i~~  107 (246)
T d1y8ca_          37 VFDDYLDLACGTG---NLTENLCPKFKNTWAVDLSQEMLSEAENK--FRSQGLKPRLACQDISNLN----INRKFDLITC  107 (246)
T ss_dssp             CTTEEEEETCTTS---TTHHHHGGGSSEEEEECSCHHHHHHHHHH--HHHTTCCCEEECCCGGGCC----CSCCEEEEEE
T ss_pred             CCCeEEEEeCcCC---HHHHHHHHhCCccEeeccchhhhhhcccc--ccccCccceeeccchhhhc----ccccccccce
Confidence            3578999997433   25667788899999999887644433331  1223447899999987643    1235798886


Q ss_pred             cCC
Q 043792          105 SFE  107 (294)
Q Consensus       105 ~a~  107 (294)
                      +.+
T Consensus       108 ~~~  110 (246)
T d1y8ca_         108 CLD  110 (246)
T ss_dssp             CTT
T ss_pred             eee
Confidence            544

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.69  E-value=0.63  Score=34.55  Aligned_cols=33  Identities=9%  Similarity=0.124  Sum_probs=29.5

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC
Q 043792           28 TVCVMDASGHFASALVRRLLLRGYTVHAALHNHG   61 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   61 (294)
                      =|+|+|| |..|...+.++.+.|.+|.++.++..
T Consensus         7 DviVIG~-GpAGl~aA~~aa~~G~kV~lie~~~~   39 (233)
T d1v59a1           7 DVVIIGG-GPAGYVAAIKAAQLGFNTACVEKRGK   39 (233)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCcEEEEEecCC
Confidence            3889998 99999999999999999999987643

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=84.69  E-value=0.52  Score=33.67  Aligned_cols=30  Identities=13%  Similarity=0.064  Sum_probs=27.5

Q ss_pred             EEEeCCCchHHHHHHHHHHHCCCeEEEEecC
Q 043792           29 VCVMDASGHFASALVRRLLLRGYTVHAALHN   59 (294)
Q Consensus        29 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   59 (294)
                      |+|+|| |..|-..+.++.+.|.+|.++.++
T Consensus         4 ViIIGg-GpaGl~AAi~aar~G~~v~iie~~   33 (184)
T d1fl2a1           4 VLIVGS-GPAGAAAAIYSARKGIRTGLMGER   33 (184)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCeEEEEEEe
Confidence            789998 999999999999999999998764

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=84.66  E-value=1  Score=34.36  Aligned_cols=77  Identities=14%  Similarity=0.198  Sum_probs=53.7

Q ss_pred             CCCCeEEEeCC-CchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEE
Q 043792           24 NATKTVCVMDA-SGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGL  102 (294)
Q Consensus        24 ~~~~~vlItGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~V  102 (294)
                      .++++||=.|+ +|.+...+++.+...| +|++++++++..+...+++.......++++..+|+.+...    -..+|.|
T Consensus        84 ~pG~rVLEiG~GsG~lt~~la~~v~~~g-~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~~~~----~~~fD~V  158 (250)
T d1yb2a1          84 RPGMDILEVGVGSGNMSSYILYALNGKG-TLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFIS----DQMYDAV  158 (250)
T ss_dssp             CTTCEEEEECCTTSHHHHHHHHHHTTSS-EEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCC----SCCEEEE
T ss_pred             CCcCEEEEeeeeCcHHHHHHHHHhCCCc-EEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeecccc----cceeeee
Confidence            56789999996 4777777777765554 8999999887666666644333445689999999876310    0246888


Q ss_pred             Eec
Q 043792          103 FYS  105 (294)
Q Consensus       103 ih~  105 (294)
                      +..
T Consensus       159 ~ld  161 (250)
T d1yb2a1         159 IAD  161 (250)
T ss_dssp             EEC
T ss_pred             eec
Confidence            854

>d1q7ea_ c.123.1.1 (A:) Hypothetical protein YfdW {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: Hypothetical protein YfdW
species: Escherichia coli [TaxId: 562]

Probab=83.74  E-value=4.7  Score=32.74  Aligned_cols=87  Identities=9%  Similarity=-0.023  Sum_probs=56.0

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC--CChhhHHH------HHhhccCCCCeEEEECCCCChh---H
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNH--GKLQCIEE------ELINYNEEKKLKVFQADPFDYH---S   91 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~--~~~~~l~~------~~~~~~~~~~v~~~~~Dl~~~~---~   91 (294)
                      ...+.|||=.+. ...|-...+.|.+.|.+|+=+-+-.  +.......      ...+...+.+-+-+..|+.+++   .
T Consensus         4 PL~GirVld~~~-~~agp~~~~~Lad~GAeVIkvE~p~~gd~~R~~~~~~~~~~s~~~~~~nr~K~si~lDL~~~~g~~~   82 (417)
T d1q7ea_           4 PLQGIKVLDFTG-VQSGPSCTQMLAWFGADVIKIERPGVGDVTRHQLRDIPDIDALYFTMLNSNKRSIELNTKTAEGKEV   82 (417)
T ss_dssp             TTTTCEEEECCC-TTHHHHHHHHHHHTTCEEEEEECTTTCCGGGTTTCSSTTSCCHHHHTTCTTCEEEECCTTSHHHHHH
T ss_pred             CCCCCEEEEcCC-hhHHHHHHHHHHHhCCeEEEECCCCCCCchhccCCCCCCCccHHHHHhCCCCeEEEEeCcCHHHHHH
Confidence            345677776663 6667788888889999999887521  11110000      0001223456789999999874   5


Q ss_pred             HHHHhccCCEEEecCCCCC
Q 043792           92 LVNALKGCSGLFYSFEPPS  110 (294)
Q Consensus        92 ~~~~~~~~d~Vih~a~~~~  110 (294)
                      +.++++++|+||++..+..
T Consensus        83 ~~~Li~~aDv~i~n~~pg~  101 (417)
T d1q7ea_          83 MEKLIREADILVENFHPGA  101 (417)
T ss_dssp             HHHHHHHCSEEEECCCC--
T ss_pred             HHHHHhcCcccEeccCCCc
Confidence            6678889999999976644

>d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class I ketol-acid reductoisomerase (KARI)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.66  E-value=1.5  Score=31.21  Aligned_cols=67  Identities=19%  Similarity=0.163  Sum_probs=50.8

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      ++++|.|+|= |--|+.=+..|...|.+|++--|..++.-...+   .    ++.++        .++.++.+..|+|..
T Consensus        15 k~k~IaViGY-GsQG~AhAlNLrDSG~~V~VGLr~gs~s~~~A~---~----~Gf~v--------~~~~eA~~~aDiim~   78 (182)
T d1np3a2          15 QGKKVAIIGY-GSQGHAHACNLKDSGVDVTVGLRSGSATVAKAE---A----HGLKV--------ADVKTAVAAADVVMI   78 (182)
T ss_dssp             HTSCEEEECC-SHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHH---H----TTCEE--------ECHHHHHHTCSEEEE
T ss_pred             CCCEEEEEee-CcHhHHHHhhhhhcCCCEEEEcCCCCccHHHHh---h----hcccc--------ccHHHHhhhcCeeee
Confidence            4689999997 889999999999999999998887654322222   1    23332        457788899999988


Q ss_pred             cCC
Q 043792          105 SFE  107 (294)
Q Consensus       105 ~a~  107 (294)
                      +..
T Consensus        79 L~P   81 (182)
T d1np3a2          79 LTP   81 (182)
T ss_dssp             CSC
T ss_pred             ecc
Confidence            876

>d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422]

Probab=83.50  E-value=5.1  Score=28.28  Aligned_cols=81  Identities=14%  Similarity=0.034  Sum_probs=46.7

Q ss_pred             eEEEeCCCchHHHHHHHHHHHC-CCeEEEEecCCCChhhHHHHHhhccCC----CCeE------------EEECCCCChh
Q 043792           28 TVCVMDASGHFASALVRRLLLR-GYTVHAALHNHGKLQCIEEELINYNEE----KKLK------------VFQADPFDYH   90 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l~~~~~~~~~~----~~v~------------~~~~Dl~~~~   90 (294)
                      ||.|-|= |-||+.+.|.++++ ..+|.++.. ....+.+...++...-.    ..++            +....-.+++
T Consensus         3 kIgINGf-GRIGR~v~R~~l~~~~~~ivaINd-~~d~~~~ayll~yDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~p~   80 (171)
T d3cmco1           3 KVGINGF-GRIGRNVFRAALKNPDIEVVAVND-LTDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDPE   80 (171)
T ss_dssp             EEEEESC-SHHHHHHHHHHTTCTTEEEEEEEC-SSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred             EEEEECC-CHHHHHHHHHHhhCCCcEEEEEcC-CCCHHHHhhhhcccccCCcccccccccCCCEEeCCcceeeEecCCHH
Confidence            7888885 99999999999987 466776654 34555555433221111    1111            1111223333


Q ss_pred             HHHHHhccCCEEEecCCCCC
Q 043792           91 SLVNALKGCSGLFYSFEPPS  110 (294)
Q Consensus        91 ~~~~~~~~~d~Vih~a~~~~  110 (294)
                      ++.=--.++|+||-|-|...
T Consensus        81 ~i~W~~~~vDiViEcTG~f~  100 (171)
T d3cmco1          81 NLAWGEIGVDIVVESTGRFT  100 (171)
T ss_dssp             GCCTGGGTCCEEEECSSSCC
T ss_pred             HccccccCCcEEEEecCccC
Confidence            22111126899999998765

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.47  E-value=0.76  Score=33.83  Aligned_cols=31  Identities=19%  Similarity=0.093  Sum_probs=28.1

Q ss_pred             EEEeCCCchHHHHHHHHHHHCCCeEEEEecCC
Q 043792           29 VCVMDASGHFASALVRRLLLRGYTVHAALHNH   60 (294)
Q Consensus        29 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   60 (294)
                      ++|+|| |..|...+.++.+.|.+|.++.+..
T Consensus         6 viIIG~-GpaG~~aA~~aar~G~kV~vIEk~~   36 (221)
T d3grsa1           6 YLVIGG-GSGGLASARRAAELGARAAVVESHK   36 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence            788898 9999999999999999999998654

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=83.41  E-value=0.5  Score=37.38  Aligned_cols=33  Identities=18%  Similarity=0.005  Sum_probs=29.8

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNH   60 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   60 (294)
                      .-|+|+|+ |..|...+..+.++|.+|+++.+.+
T Consensus        20 ~DVvVIGa-G~aGl~AA~~aa~~G~~V~vlEK~~   52 (317)
T d1qo8a2          20 TQVLVVGA-GSAGFNASLAAKKAGANVILVDKAP   52 (317)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred             cCEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            45999998 9999999999999999999998754

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=83.36  E-value=0.37  Score=37.15  Aligned_cols=35  Identities=17%  Similarity=0.201  Sum_probs=29.0

Q ss_pred             CCeEEEeCCCchHHH-----HHHHHHHHCCCeEEEEecCCC
Q 043792           26 TKTVCVMDASGHFAS-----ALVRRLLLRGYTVHAALHNHG   61 (294)
Q Consensus        26 ~~~vlItGatG~iG~-----~l~~~L~~~g~~V~~~~r~~~   61 (294)
                      |++|.|+| =|.+|+     +|+..|.++|++|.+++-++.
T Consensus         1 mr~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           1 MRQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             CEEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CCEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            57899998 677777     566688889999999998864

>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain
species: Fungus (Phanerochaete chrysosporium) [TaxId: 5306]

Probab=83.08  E-value=0.59  Score=37.76  Aligned_cols=30  Identities=20%  Similarity=0.079  Sum_probs=27.3

Q ss_pred             EEEeCCCchHHHHHHHHHHHCCCeEEEEecC
Q 043792           29 VCVMDASGHFASALVRRLLLRGYTVHAALHN   59 (294)
Q Consensus        29 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   59 (294)
                      ++|.|+ |.-|.-++.+|.+.|.+|.++-+-
T Consensus         5 ~IIVGs-G~aG~v~A~rLae~g~~VlvLEaG   34 (360)
T d1kdga1           5 YIIVGA-GPGGIIAADRLSEAGKKVLLLERG   34 (360)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHhhCCCeEEEEEcc
Confidence            688897 999999999999999999999764

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=83.06  E-value=1.9  Score=32.20  Aligned_cols=73  Identities=15%  Similarity=0.169  Sum_probs=48.0

Q ss_pred             CCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCEEEe
Q 043792           25 ATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFY  104 (294)
Q Consensus        25 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~Vih  104 (294)
                      +.++||=.|++.  |.. +..|+++|++|++++.+++-.+..++.  ....+.+++++.+|+.+..    .-+..|.|+.
T Consensus        41 ~~~~iLDiGcGt--G~~-~~~l~~~~~~v~gvD~s~~mi~~a~~~--~~~~~~~i~~~~~d~~~l~----~~~~fD~I~~  111 (251)
T d1wzna1          41 EVRRVLDLACGT--GIP-TLELAERGYEVVGLDLHEEMLRVARRK--AKERNLKIEFLQGDVLEIA----FKNEFDAVTM  111 (251)
T ss_dssp             CCCEEEEETCTT--CHH-HHHHHHTTCEEEEEESCHHHHHHHHHH--HHHTTCCCEEEESCGGGCC----CCSCEEEEEE
T ss_pred             CCCEEEEeCCCC--Ccc-chhhcccceEEEEEeeccccccccccc--cccccccchheehhhhhcc----cccccchHhh
Confidence            457899999743  443 456778999999999887544444432  1223447899999986643    1134688776


Q ss_pred             cC
Q 043792          105 SF  106 (294)
Q Consensus       105 ~a  106 (294)
                      ..
T Consensus       112 ~~  113 (251)
T d1wzna1         112 FF  113 (251)
T ss_dssp             CS
T ss_pred             hh
Confidence            53

>d1ps9a2 c.3.1.1 (A:466-627) 2,4-dienoyl-CoA reductase, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=82.97  E-value=0.42  Score=33.60  Aligned_cols=30  Identities=13%  Similarity=0.142  Sum_probs=26.0

Q ss_pred             CCCCeEEEeCCCchHHHHHHHHHHHCCCeEE
Q 043792           24 NATKTVCVMDASGHFASALVRRLLLRGYTVH   54 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~   54 (294)
                      ..+++|+|+|| |++|..+++.+.+.|.++.
T Consensus        27 ~~gkrVvVIGg-G~~g~d~a~~~~r~G~~~~   56 (162)
T d1ps9a2          27 PVGNKVAIIGC-GGIGFDTAMYLSQPGESTS   56 (162)
T ss_dssp             CCCSEEEEECC-HHHHHHHHHHHTCCSSCGG
T ss_pred             ccCCceEEEcC-chhHHHHHHHHHHcCCccc
Confidence            45789999998 9999999999999996543

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=82.65  E-value=0.98  Score=33.45  Aligned_cols=83  Identities=8%  Similarity=-0.010  Sum_probs=49.8

Q ss_pred             CCCCCeEEEeCCC-chHHHHHHHHHHHCCCeEEEEecCCCChhhHHHHHhhccCCCCeEEEECCCCChhHHHHHhccCCE
Q 043792           23 SNATKTVCVMDAS-GHFASALVRRLLLRGYTVHAALHNHGKLQCIEEELINYNEEKKLKVFQADPFDYHSLVNALKGCSG  101 (294)
Q Consensus        23 ~~~~~~vlItGat-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~  101 (294)
                      -.++++||-+|+. |+....+++ +...+..|++++.++...+..+..+. .....++.++.+|..+...   .-..+|.
T Consensus        73 l~~g~~VLdiG~GtG~~s~~la~-~~~~~g~V~~id~~~~~~~~a~~~~~-~~~~~n~~~~~~d~~~~~~---~~~~fD~  147 (213)
T d1dl5a1          73 LDKGMRVLEIGGGTGYNAAVMSR-VVGEKGLVVSVEYSRKICEIAKRNVE-RLGIENVIFVCGDGYYGVP---EFSPYDV  147 (213)
T ss_dssp             CCTTCEEEEECCTTSHHHHHHHH-HHCTTCEEEEEESCHHHHHHHHHHHH-HTTCCSEEEEESCGGGCCG---GGCCEEE
T ss_pred             ccccceEEEecCccchhHHHHHH-HhCCCCcEEEeecchhhHHHhhhhHh-hhcccccccccCchHHccc---cccchhh
Confidence            3567899988864 444444444 44445589999988765555444321 2334578888888654221   1124798


Q ss_pred             EEecCCCCC
Q 043792          102 LFYSFEPPS  110 (294)
Q Consensus       102 Vih~a~~~~  110 (294)
                      |+..++...
T Consensus       148 I~~~~~~~~  156 (213)
T d1dl5a1         148 IFVTVGVDE  156 (213)
T ss_dssp             EEECSBBSC
T ss_pred             hhhhccHHH
Confidence            888776543

>d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Leuconostoc mesenteroides [TaxId: 1245]

Probab=82.44  E-value=5.4  Score=28.81  Aligned_cols=42  Identities=7%  Similarity=0.140  Sum_probs=26.9

Q ss_pred             CeEEEeCCCchHHHHHH-HHH---HHC-----CCeEEEEecCCCChhhHHH
Q 043792           27 KTVCVMDASGHFASALV-RRL---LLR-----GYTVHAALHNHGKLQCIEE   68 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~-~~L---~~~-----g~~V~~~~r~~~~~~~l~~   68 (294)
                      ..++|.||||=+.+.-. -.|   ...     +..|+++.|+.-..+...+
T Consensus         6 t~lVIFGaTGDLa~RKL~PAL~~L~~~g~lp~~~~Iig~aR~~~~~e~f~~   56 (195)
T d1h9aa1           6 TLVTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQ   56 (195)
T ss_dssp             EEEEEETTTSHHHHHTHHHHHHHHHHTTSSCSSEEEEEEESSCCCHHHHHH
T ss_pred             eEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCCEEEEEECCcCcHHHHHH
Confidence            45668899999987422 222   222     3679999998765554433

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=82.38  E-value=0.37  Score=35.55  Aligned_cols=31  Identities=19%  Similarity=0.203  Sum_probs=25.8

Q ss_pred             CeEEEeCCCchHHH-----HHHHHHHHCCCeEEEEe
Q 043792           27 KTVCVMDASGHFAS-----ALVRRLLLRGYTVHAAL   57 (294)
Q Consensus        27 ~~vlItGatG~iG~-----~l~~~L~~~g~~V~~~~   57 (294)
                      ||++|||-+..+|.     +|+..|.++|++|..++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            78999997547776     77888999999999986

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=82.34  E-value=0.64  Score=34.39  Aligned_cols=32  Identities=13%  Similarity=-0.005  Sum_probs=29.1

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCCCeEEEEecC
Q 043792           27 KTVCVMDASGHFASALVRRLLLRGYTVHAALHN   59 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   59 (294)
                      ..++|+|| |..|...+..+.+.|.+|.++.+.
T Consensus         6 ~DlvVIG~-GpaGl~aA~~aa~~G~~V~liE~~   37 (220)
T d1lvla1           6 TTLLIIGG-GPGGYVAAIRAGQLGIPTVLVEGQ   37 (220)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             cCEEEECC-CHHHHHHHHHHHHCCCcEEEEecC
Confidence            46899997 999999999999999999998765

>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Wolinella succinogenes [TaxId: 844]

Probab=82.13  E-value=0.66  Score=36.73  Aligned_cols=31  Identities=10%  Similarity=-0.045  Sum_probs=28.4

Q ss_pred             EEEeCCCchHHHHHHHHHHHCCCeEEEEecCC
Q 043792           29 VCVMDASGHFASALVRRLLLRGYTVHAALHNH   60 (294)
Q Consensus        29 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   60 (294)
                      |+|+|| |..|...+-.++++|.+|+++...+
T Consensus         8 VvVIG~-G~AGl~AAl~aa~~G~~V~liEK~~   38 (336)
T d2bs2a2           8 SLVIGG-GLAGLRAAVATQQKGLSTIVLSLIP   38 (336)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEecCC
Confidence            899997 9999999999999999999998754

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=82.12  E-value=0.93  Score=33.56  Aligned_cols=38  Identities=8%  Similarity=0.054  Sum_probs=33.5

Q ss_pred             CCCCCeEEEeCCCchHHHHHHHHHHHCCCeEEEEecCCC
Q 043792           23 SNATKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHG   61 (294)
Q Consensus        23 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   61 (294)
                      ..++|+|+|.|+ |.-|-.++..|.+.+.+++.+.|+..
T Consensus        29 ~~~gK~V~VvG~-G~Sa~dia~~~~~~~~~~~~~~~~~~   66 (235)
T d1w4xa2          29 DFSGQRVGVIGT-GSSGIQVSPQIAKQAAELFVFQRTPH   66 (235)
T ss_dssp             CCBTCEEEEECC-SHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred             CCCCCEEEEECC-CccHHHHHHHHHhhhccccccccccc
Confidence            357899999997 99999999999999999999888753

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=81.28  E-value=0.78  Score=35.30  Aligned_cols=38  Identities=16%  Similarity=0.281  Sum_probs=31.9

Q ss_pred             CCCCeEEEeCCCchHHHH-----HHHHHHHCCCeEEEEecCCC
Q 043792           24 NATKTVCVMDASGHFASA-----LVRRLLLRGYTVHAALHNHG   61 (294)
Q Consensus        24 ~~~~~vlItGatG~iG~~-----l~~~L~~~g~~V~~~~r~~~   61 (294)
                      ....+|+|+.|=|.+|+.     |+..|+++|++|.+++-++.
T Consensus        17 ~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          17 RNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TTSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             cCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            456789999889999984     57888889999999998875

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=81.00  E-value=1.1  Score=32.92  Aligned_cols=32  Identities=19%  Similarity=0.072  Sum_probs=28.6

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCCCeEEEEecCC
Q 043792           28 TVCVMDASGHFASALVRRLLLRGYTVHAALHNH   60 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   60 (294)
                      -|+|+|| |..|...+.++.+.|.+|.++.+..
T Consensus         5 DviVIG~-GpaGl~aA~~aar~G~kV~vIEk~~   36 (223)
T d1ebda1           5 ETLVVGA-GPGGYVAAIRAAQLGQKVTIVEKGN   36 (223)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCEEEEEecCC
Confidence            4789997 9999999999999999999998754

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=80.85  E-value=0.61  Score=34.72  Aligned_cols=36  Identities=19%  Similarity=0.122  Sum_probs=30.0

Q ss_pred             CCeEEEeCCCchHHH-----HHHHHHHHCCCeEEEEecCCC
Q 043792           26 TKTVCVMDASGHFAS-----ALVRRLLLRGYTVHAALHNHG   61 (294)
Q Consensus        26 ~~~vlItGatG~iG~-----~l~~~L~~~g~~V~~~~r~~~   61 (294)
                      ||.|.|+++-|.+|.     +|+..|.++|++|..++-++.
T Consensus         1 ~kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~~   41 (232)
T d1hyqa_           1 VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADIT   41 (232)
T ss_dssp             CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred             CEEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            578999988888887     677788889999999987654

>d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=80.55  E-value=7.5  Score=27.38  Aligned_cols=40  Identities=15%  Similarity=0.133  Sum_probs=28.3

Q ss_pred             CeEEEeCCCchHHHHHHHHHHHCC---CeEEEEecCCCChhhHHH
Q 043792           27 KTVCVMDASGHFASALVRRLLLRG---YTVHAALHNHGKLQCIEE   68 (294)
Q Consensus        27 ~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~l~~   68 (294)
                      |||.|-|= |-||+.+.|.++++.   .+|.++.. +...+.+..
T Consensus         1 ikIgINGf-GRIGR~v~R~~~~~~~~~i~ivaINd-~~~~~~~ay   43 (172)
T d1rm4a1           1 LKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVIND-TGGVKQASH   43 (172)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHCSSCSEEEEEEEC-TTCHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEEcC-CCCHHHHHH
Confidence            58999885 999999999998753   45665543 345555544

>d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=80.31  E-value=7.7  Score=28.00  Aligned_cols=96  Identities=16%  Similarity=0.110  Sum_probs=58.3

Q ss_pred             eEEEeCCCchHHHHHHHHHHHCCC-eEEEEecCCCChhhHHHHHhhccCCCCeEEEECC-C------------------C
Q 043792           28 TVCVMDASGHFASALVRRLLLRGY-TVHAALHNHGKLQCIEEELINYNEEKKLKVFQAD-P------------------F   87 (294)
Q Consensus        28 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~~~v~~~~~D-l------------------~   87 (294)
                      +|-|.|- |..|.+++.++.+++. .|..+.-+.+. +.+..      .....++..+. +                  .
T Consensus         3 ~IkViGv-GGaG~n~vn~~~~~~~~~v~~iainTD~-~~L~~------~~~~~ki~iG~~~t~G~Gagg~p~~g~~aa~e   74 (198)
T d1rq2a1           3 VIKVVGI-GGGGVNAVNRMIEQGLKGVEFIAINTDA-QALLM------SDADVKLDVGRDSTRGLGAGADPEVGRKAAED   74 (198)
T ss_dssp             CEEEEEE-HHHHHHHHHHHHHTTCCSEEEEEEESCH-HHHHH------CCCSEEEECCTTTC-----CCCHHHHHHHHHH
T ss_pred             eEEEEEe-CchHHHHHHHHHHcCCCCceEEEEcchH-HHHhc------CCcchhhccccccccCCCcCcChhhhHhhHHH
Confidence            4567776 6679999999999874 24443333322 22222      11233333331 1                  2


Q ss_pred             ChhHHHHHhccCCEEEecCCCCCCCCcchhhhHhHhhHHHHHHHHHHHhcCCCcE
Q 043792           88 DYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETMAAHNVLEACAQTNTVDK  142 (294)
Q Consensus        88 ~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~  142 (294)
                      +.+.+.+.++++|.||-+|+.-..          +-..++--+.+.|++. ++-.
T Consensus        75 ~~~~I~~~l~~~d~vfi~AGlGGg----------TGtGaaPviA~iake~-g~l~  118 (198)
T d1rq2a1          75 AKDEIEELLRGADMVFVTAGEGGG----------TGTGGAPVVASIARKL-GALT  118 (198)
T ss_dssp             THHHHHHHHTTCSEEEEEEETTSS----------HHHHHHHHHHHHHHHH-TCEE
T ss_pred             HHHHHHHHhcCCCEEEEEEecCCC----------CCcchHHHHHHHHHHc-CCcE
Confidence            446778888899999999988664          2234455677888887 6533

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=80.12  E-value=0.71  Score=34.39  Aligned_cols=35  Identities=20%  Similarity=0.171  Sum_probs=28.9

Q ss_pred             CCeEEEeCCCchHHH-----HHHHHHHHCCCeEEEEecCC
Q 043792           26 TKTVCVMDASGHFAS-----ALVRRLLLRGYTVHAALHNH   60 (294)
Q Consensus        26 ~~~vlItGatG~iG~-----~l~~~L~~~g~~V~~~~r~~   60 (294)
                      ++.|.|+|+-|.+|+     +|+..|.++|++|.+++-+.
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D~   41 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL   41 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            467889999999887     67778888999999998653